View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5967_high_3 (Length: 438)

Name: NF5967_high_3
Description: NF5967
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5967_high_3
NF5967_high_3
[»] chr3 (20 HSPs)
chr3 (10-419)||(27782743-27783152)
chr3 (378-421)||(20327837-20327880)
chr3 (327-421)||(35038416-35038515)
chr3 (378-419)||(1723066-1723107)
chr3 (378-419)||(4155377-4155418)
chr3 (371-419)||(16239636-16239685)
chr3 (371-415)||(27086635-27086680)
chr3 (378-419)||(54567945-54567986)
chr3 (378-416)||(17638287-17638325)
chr3 (329-419)||(22729099-22729194)
chr3 (378-419)||(11589838-11589879)
chr3 (327-356)||(16239588-16239617)
chr3 (329-358)||(17001477-17001506)
chr3 (378-419)||(21833401-21833442)
chr3 (371-419)||(33640090-33640139)
chr3 (329-358)||(39269330-39269359)
chr3 (378-419)||(54368569-54368610)
chr3 (330-358)||(472116-472144)
chr3 (378-418)||(12930119-12930159)
chr3 (378-410)||(50083079-50083111)
[»] chr5 (17 HSPs)
chr5 (329-419)||(2063724-2063818)
chr5 (370-417)||(13296717-13296764)
chr5 (329-419)||(24528539-24528634)
chr5 (378-419)||(8081103-8081144)
chr5 (327-419)||(41666983-41667080)
chr5 (327-360)||(2061992-2062025)
chr5 (327-358)||(19705900-19705931)
chr5 (327-358)||(41666813-41666844)
chr5 (328-358)||(6413482-6413512)
chr5 (329-419)||(15480321-15480416)
chr5 (328-358)||(17352491-17352521)
chr5 (328-358)||(24531597-24531627)
chr5 (378-419)||(9368648-9368689)
chr5 (378-419)||(18333689-18333730)
chr5 (378-419)||(24531652-24531693)
chr5 (329-358)||(37782106-37782135)
chr5 (330-358)||(30770321-30770349)
[»] chr8 (27 HSPs)
chr8 (328-419)||(41790657-41790752)
chr8 (371-419)||(10884110-10884158)
chr8 (327-419)||(24532411-24532508)
chr8 (327-419)||(11232184-11232281)
chr8 (329-419)||(12317045-12317140)
chr8 (329-419)||(11232419-11232514)
chr8 (371-419)||(20301306-20301355)
chr8 (371-419)||(21087938-21087987)
chr8 (327-419)||(19256810-19256907)
chr8 (327-358)||(5932005-5932036)
chr8 (328-411)||(12688305-12688393)
chr8 (327-358)||(15042726-15042757)
chr8 (327-358)||(35682837-35682868)
chr8 (327-358)||(38447483-38447514)
chr8 (327-358)||(39052593-39052624)
chr8 (327-358)||(39052985-39053016)
chr8 (329-358)||(7669640-7669669)
chr8 (293-358)||(7729907-7729969)
chr8 (378-419)||(28213094-28213135)
chr8 (378-419)||(31197668-31197708)
chr8 (371-419)||(37001271-37001320)
chr8 (328-357)||(42584672-42584701)
chr8 (330-358)||(20301261-20301289)
chr8 (330-358)||(20301501-20301529)
chr8 (330-358)||(21087893-21087921)
chr8 (330-358)||(21088133-21088161)
chr8 (382-418)||(31079566-31079602)
[»] chr1 (26 HSPs)
chr1 (334-419)||(4098393-4098482)
chr1 (330-419)||(38668125-38668219)
chr1 (327-417)||(4112998-4113093)
chr1 (378-419)||(25145710-25145751)
chr1 (378-419)||(29266006-29266047)
chr1 (378-419)||(35772082-35772123)
chr1 (327-411)||(35772261-35772350)
chr1 (327-358)||(2859448-2859479)
chr1 (327-358)||(15986389-15986420)
chr1 (329-419)||(3169765-3169860)
chr1 (330-360)||(16163167-16163197)
chr1 (370-419)||(30369879-30369929)
chr1 (378-416)||(33156786-33156824)
chr1 (328-358)||(40079150-40079180)
chr1 (378-419)||(2120130-2120171)
chr1 (327-360)||(17452882-17452915)
chr1 (329-358)||(20208582-20208611)
chr1 (293-354)||(21626399-21626457)
chr1 (329-358)||(25713392-25713421)
chr1 (329-358)||(26173280-26173309)
chr1 (378-411)||(33157274-33157307)
chr1 (378-419)||(39348343-39348383)
chr1 (378-419)||(51589859-51589900)
chr1 (330-358)||(8870745-8870773)
chr1 (329-357)||(26173513-26173541)
chr1 (330-358)||(38668360-38668388)
[»] chr2 (24 HSPs)
chr2 (327-419)||(27036405-27036499)
chr2 (378-419)||(93617-93658)
chr2 (378-419)||(5509132-5509173)
chr2 (371-419)||(28407783-28407832)
chr2 (378-419)||(40379434-40379475)
chr2 (327-358)||(5711495-5711526)
chr2 (327-358)||(5711731-5711762)
chr2 (327-419)||(14466400-14466497)
chr2 (328-411)||(14927100-14927188)
chr2 (327-358)||(16533544-16533575)
chr2 (327-358)||(17719397-17719428)
chr2 (328-358)||(37812554-37812584)
chr2 (378-419)||(93344-93385)
chr2 (378-419)||(2029822-2029863)
chr2 (378-419)||(10571023-10571064)
chr2 (378-419)||(15124773-15124814)
chr2 (378-419)||(16419320-16419361)
chr2 (329-358)||(16419501-16419530)
chr2 (329-358)||(17525394-17525423)
chr2 (371-419)||(21383660-21383709)
chr2 (327-355)||(93182-93210)
chr2 (378-418)||(27897597-27897637)
chr2 (330-358)||(32356386-32356414)
chr2 (369-416)||(33381184-33381232)
[»] chr7 (28 HSPs)
chr7 (327-419)||(48243427-48243524)
chr7 (327-410)||(6634852-6634940)
chr7 (328-419)||(25620134-25620230)
chr7 (327-419)||(29469602-29469699)
chr7 (378-419)||(10882229-10882270)
chr7 (371-419)||(33996301-33996350)
chr7 (378-419)||(40121914-40121955)
chr7 (379-419)||(4886383-4886423)
chr7 (372-419)||(21821852-21821900)
chr7 (327-419)||(21861291-21861388)
chr7 (327-358)||(21861526-21861557)
chr7 (327-358)||(29469837-29469868)
chr7 (327-358)||(31485480-31485511)
chr7 (327-410)||(34027624-34027712)
chr7 (327-358)||(36277282-36277313)
chr7 (327-358)||(43688215-43688246)
chr7 (329-419)||(31257257-31257352)
chr7 (329-358)||(2404230-2404259)
chr7 (378-411)||(3038082-3038115)
chr7 (329-358)||(3520096-3520125)
chr7 (329-358)||(4454775-4454804)
chr7 (329-358)||(26239972-26240001)
chr7 (327-360)||(26562127-26562160)
chr7 (378-419)||(33834244-33834285)
chr7 (378-411)||(36993072-36993105)
chr7 (329-358)||(48243117-48243146)
chr7 (378-410)||(7786253-7786285)
chr7 (330-358)||(35308202-35308230)
[»] chr6 (20 HSPs)
chr6 (327-419)||(9705017-9705114)
chr6 (327-419)||(13353198-13353295)
chr6 (327-419)||(33796323-33796420)
chr6 (378-419)||(4868803-4868844)
chr6 (327-358)||(4868633-4868664)
chr6 (327-358)||(31961175-31961206)
chr6 (377-419)||(8001540-8001582)
chr6 (328-410)||(16570157-16570244)
chr6 (378-419)||(3680065-3680106)
chr6 (329-358)||(3680245-3680274)
chr6 (329-358)||(6542999-6543028)
chr6 (378-419)||(8026442-8026483)
chr6 (371-419)||(12330169-12330218)
chr6 (371-419)||(15082134-15082183)
chr6 (378-419)||(20373623-20373664)
chr6 (371-419)||(27653262-27653311)
chr6 (378-419)||(30256631-30256672)
chr6 (378-419)||(30256865-30256906)
chr6 (378-419)||(33494592-33494633)
chr6 (371-414)||(11085626-11085670)
[»] chr4 (32 HSPs)
chr4 (379-419)||(52827415-52827455)
chr4 (328-419)||(52559565-52559661)
chr4 (284-358)||(44118915-44118986)
chr4 (378-419)||(12869253-12869294)
chr4 (378-419)||(17111616-17111657)
chr4 (378-419)||(22231298-22231339)
chr4 (378-419)||(35788712-35788753)
chr4 (378-419)||(40716611-40716652)
chr4 (378-419)||(40717431-40717472)
chr4 (327-358)||(9279224-9279255)
chr4 (327-358)||(11036802-11036833)
chr4 (327-358)||(22863471-22863502)
chr4 (327-358)||(27634137-27634168)
chr4 (327-358)||(28245582-28245613)
chr4 (327-358)||(31254463-31254494)
chr4 (327-358)||(35788656-35788687)
chr4 (327-358)||(35788891-35788922)
chr4 (327-358)||(39902619-39902650)
chr4 (378-419)||(1518217-1518258)
chr4 (371-419)||(9685443-9685492)
chr4 (378-419)||(14783177-14783218)
chr4 (378-419)||(24513350-24513391)
chr4 (378-419)||(25052905-25052946)
chr4 (378-419)||(35609701-35609742)
chr4 (329-358)||(35645821-35645850)
chr4 (378-419)||(50543320-50543361)
chr4 (371-419)||(50543557-50543606)
chr4 (378-419)||(53828513-53828554)
chr4 (378-410)||(7926611-7926643)
chr4 (378-418)||(23209894-23209934)
chr4 (330-358)||(28246141-28246169)
chr4 (330-358)||(35796798-35796826)
[»] scaffold0083 (1 HSPs)
scaffold0083 (330-421)||(51236-51332)
[»] scaffold0048 (1 HSPs)
scaffold0048 (327-419)||(81839-81936)
[»] scaffold0692 (2 HSPs)
scaffold0692 (329-419)||(5744-5839)
scaffold0692 (330-358)||(5600-5628)
[»] scaffold0519 (2 HSPs)
scaffold0519 (329-419)||(1915-2010)
scaffold0519 (327-358)||(2148-2179)
[»] scaffold0766 (1 HSPs)
scaffold0766 (329-358)||(6273-6302)
[»] scaffold0481 (1 HSPs)
scaffold0481 (378-419)||(3461-3502)
[»] scaffold0129 (1 HSPs)
scaffold0129 (378-419)||(14356-14397)
[»] scaffold0092 (1 HSPs)
scaffold0092 (378-419)||(5708-5749)
[»] scaffold0005 (2 HSPs)
scaffold0005 (378-419)||(56512-56553)
scaffold0005 (371-410)||(288656-288696)
[»] scaffold0001 (1 HSPs)
scaffold0001 (327-355)||(429870-429898)


Alignment Details
Target: chr3 (Bit Score: 320; Significance: 1e-180; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 10 - 419
Target Start/End: Original strand, 27782743 - 27783152
Alignment:
Q  10 gcacagaattaagtagcaaggaaatttctttgtttcaaggtcattgtttatgcgagaatatgaaaaattaaaagagcaacatacaaggaacttcttttca 109  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  27782743 gcacagaattaagtagcaagggaatttctttgtttcaaggtcattgtttatgcgagaatatgaaaaattaaaagagcaacatacagggaacttcttttca 27782842  T
Q  110 aggtcattgtcccttaannnnnnnnnnnnnnnnnnnnnnctgtcatttgcaaatgagattataaagcttagggccaaacaagttgcaaggttaaacaatg 209  Q
    |||||||||||||||||                      || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27782843 aggtcattgtcccttaatttttgttttaatttttattttctttcatttgcaaatgagattataaagcttagggccaaacaagttgcaaggttaaacaatg 27782942  T
Q  210 cctgataagagtttataaaaaatgtcactatataaaaacataatatgttcacgcacgtgtgatagggtgtactgagaaaaacatgttaaagagtccacat 309  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27782943 cctgataagagtttataagaaatgtcacgatataaaaacataatatgttcacgcacgtgtgatagggtgtactgagaaaaacatgttaaagagtccacat 27783042  T
Q  310 catataagagatggcccgcctgacaatgtgtttataagtgggggcaatctttattaagtaagttttgtgggttgtgttaggcccaatcatgatttctaag 409  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27783043 catataagagatggcccgcctgacaatgtgtttataagtgggggcaatcttcattaagtaagttttgtgggttgtgttaggcccaatcatgatttctaag 27783142  T
Q  410 atggtatcag 419  Q
    ||||||||||    
T  27783143 atggtatcag 27783152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 421
Target Start/End: Complemental strand, 20327880 - 20327837
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagtg 421  Q
    |||||||||||||||||| |||||||||||| ||||||||||||    
T  20327880 gggttgtgttaggcccaaccatgatttctaatatggtatcagtg 20327837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 421
Target Start/End: Complemental strand, 35038515 - 35038416
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagtg 421  Q
    |||||||||||||||||||||||||||||||| | |      |||   |||||||||| ||||||||||||||| || || |||||||||||||||||||    
T  35038515 gcctgacaatgtgtttataagtgggggcaatcctcacctgacaagctggttttgtggggttgtgttaggcccaaccacgacttctaagatggtatcagtg 35038416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 1723107 - 1723066
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || ||||||||||||||||||||    
T  1723107 gggttgtgttaggcccaaccacgatttctaagatggtatcag 1723066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 4155377 - 4155418
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || ||||||||||||||||||||    
T  4155377 gggttgtgttaggcccaaccacgatttctaagatggtatcag 4155418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 16239636 - 16239685
Alignment:
Q  371 gttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  16239636 gttttgtgggattgtgttaggcccaaccacgatttctaagatggtatcag 16239685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 415
Target Start/End: Original strand, 27086635 - 27086680
Alignment:
Q  371 gttttgtgg-gttgtgttaggcccaatcatgatttctaagatggta 415  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||    
T  27086635 gttttgtggagttgtgttaggcccaaccatgatttctaagatggta 27086680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 54567945 - 54567986
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || ||||||||||||||||||||    
T  54567945 gggttgtgttaggcccaaccacgatttctaagatggtatcag 54567986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 416
Target Start/End: Original strand, 17638287 - 17638325
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtat 416  Q
    |||||||||||||||||| || |||||||||||||||||    
T  17638287 gggttgtgttaggcccaaccacgatttctaagatggtat 17638325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 419
Target Start/End: Original strand, 22729099 - 22729194
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtg-ggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    ||||||||||||||| |||||||||||||| | | |    |||   |||||||| ||||||||||||||||| ||  |||||||||||||||||||    
T  22729099 ctgacaatgtgtttacaagtgggggcaatcctcacttcacaagccggttttgtgaggttgtgttaggcccaaccacaatttctaagatggtatcag 22729194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 11589838 - 11589879
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || ||||||||| ||||||||||    
T  11589838 gggttgtgttaggcccaaccacgatttctaatatggtatcag 11589879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 356
Target Start/End: Original strand, 16239588 - 16239617
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaa 356  Q
    ||||||||||||||||||||||||||||||    
T  16239588 gcctgacaatgtgtttataagtgggggcaa 16239617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Complemental strand, 17001506 - 17001477
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  17001506 ctgacaatgtgtttataagtgggggcaatc 17001477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 21833401 - 21833442
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || ||||||||| ||||||||||    
T  21833401 gggttgtgttaggcccaaccacgatttctaacatggtatcag 21833442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 33640090 - 33640139
Alignment:
Q  371 gttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||| ||||||||||||||||||  |||||||||||| ||||||    
T  33640090 gttttgtgggattgtgttaggcccaatcacaatttctaagatgatatcag 33640139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Original strand, 39269330 - 39269359
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  39269330 ctgacaatgtgtttataagtgggggcaatc 39269359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 54368569 - 54368610
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||| ||||| || ||||||||||||||||||||    
T  54368569 gggttgtgttagacccaaccacgatttctaagatggtatcag 54368610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 358
Target Start/End: Complemental strand, 472144 - 472116
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||    
T  472144 tgacaatgtgtttataagtgggggcaatc 472116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 12930159 - 12930119
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatca 418  Q
    |||||||||||||||||| ||  ||||||||||||||||||    
T  12930159 gggttgtgttaggcccaaccaccatttctaagatggtatca 12930119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 410
Target Start/End: Complemental strand, 50083111 - 50083079
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaaga 410  Q
    |||||||||||||||||| ||||||||||||||    
T  50083111 gggttgtgttaggcccaaccatgatttctaaga 50083079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 329 - 419
Target Start/End: Complemental strand, 2063818 - 2063724
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatctttatt---aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||||||||||||||| | | |   ||||  |||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  2063818 ctgacaatgtgtttataagtgggggcaatcctcactcacaagtcggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcag 2063724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 417
Target Start/End: Original strand, 13296717 - 13296764
Alignment:
Q  370 agttttgtgggttgtgttaggcccaatcatgatttctaagatggtatc 417  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||    
T  13296717 agttttgtgggttgtgttaggcccaaccacgatttctaagatggtatc 13296764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 329 - 419
Target Start/End: Original strand, 24528539 - 24528634
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||||||||||||||| | |      |||   |||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  24528539 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatggtatcag 24528634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 8081144 - 8081103
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  8081144 gggttgtgttaggcccaaccatgatttctaagatggtatcag 8081103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 41667080 - 41666983
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||||||||||||||||| | |      |||   |||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  41667080 gcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcag 41666983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 360
Target Start/End: Complemental strand, 2062025 - 2061992
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatctt 360  Q
    ||||||||||||||||||||||||||||||||||    
T  2062025 gcctgacaatgtgtttataagtgggggcaatctt 2061992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Original strand, 19705900 - 19705931
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  19705900 gcctgacaatgtgtttataagtgggggcaatc 19705931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 41666844 - 41666813
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  41666844 gcctgacaatgtgtttataagtgggggcaatc 41666813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 358
Target Start/End: Complemental strand, 6413512 - 6413482
Alignment:
Q  328 cctgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||||    
T  6413512 cctgacaatgtgtttataagtgggggcaatc 6413482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 419
Target Start/End: Original strand, 15480321 - 15480416
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatctt----tattaagtaagttttgt-gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||||||||||||||| |    |   |||   ||||||| ||||| |||||||||||| || ||||||||||||||||||||    
T  15480321 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttctgttaggcccaaccacgatttctaagatggtatcag 15480416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 358
Target Start/End: Complemental strand, 17352521 - 17352491
Alignment:
Q  328 cctgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||||    
T  17352521 cctgacaatgtgtttataagtgggggcaatc 17352491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 358
Target Start/End: Original strand, 24531597 - 24531627
Alignment:
Q  328 cctgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||||    
T  24531597 cctgacaatgtgtttataagtgggggcaatc 24531627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 9368648 - 9368689
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| ||| ||||||||| |||||||||    
T  9368648 gggttgtgttaggcccaaccataatttctaaggtggtatcag 9368689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 18333730 - 18333689
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || || |||||||||||||||||    
T  18333730 gggttgtgttaggcccaaccacgaattctaagatggtatcag 18333689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 24531652 - 24531693
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    ||||||||||| |||||| || ||||||||||||||||||||    
T  24531652 gggttgtgttatgcccaaccacgatttctaagatggtatcag 24531693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Complemental strand, 37782135 - 37782106
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  37782135 ctgacaatgtgtttataagtgggggcaatc 37782106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 358
Target Start/End: Complemental strand, 30770349 - 30770321
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||    
T  30770349 tgacaatgtgtttataagtgggggcaatc 30770321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 419
Target Start/End: Original strand, 41790657 - 41790752
Alignment:
Q  328 cctgacaatgtgtttataagtgggggcaatctttat----taagtaagttttgtgggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    ||||||||||||||||||||||||| ||||| | |     ||||   ||||||||||||||||||||||||| || ||||||||||||||||||||    
T  41790657 cctgacaatgtgtttataagtggggacaatcctcacctcataagccggttttgtgggttgtgttaggcccaaccacgatttctaagatggtatcag 41790752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 10884110 - 10884158
Alignment:
Q  371 gttttgtgggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||    
T  10884110 gttttgtgggttgtgttaggcccaaccacgatttctaagatggtatcag 10884158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 24532508 - 24532411
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||||||||||||||||| | |      |||   |||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  24532508 gcctgacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatggtatcag 24532411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 11232281 - 11232184
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatcttta--tt--aagtaagttttgt-gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||||||||||||||||| | |  ||  |||   ||||||| |||||||||||||||||| ||  |||||||||||||||||||    
T  11232281 gcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcag 11232184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 419
Target Start/End: Original strand, 12317045 - 12317140
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatctttattaagtaag----ttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||||||||||||||| | |     ||||    ||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  12317045 ctgacaatgtgtttataagtgggggcaatcctcacctcataagctgattttgtgggattgtgttaggcccaaccacgatttctaagatggtatcag 12317140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 419
Target Start/End: Complemental strand, 11232514 - 11232419
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatcttta--tta--agtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||||||||||||||| | |  |||  ||   |||||||||| ||||||||||||||| ||  |||||||||||||||||||    
T  11232514 ctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcag 11232419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 20301306 - 20301355
Alignment:
Q  371 gttttgtg-ggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||| ||||||||||||||||| || ||||||||||||||||||||    
T  20301306 gttttgtgaggttgtgttaggcccaaccacgatttctaagatggtatcag 20301355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 21087938 - 21087987
Alignment:
Q  371 gttttgtg-ggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||| ||||||||||||||||| || ||||||||||||||||||||    
T  21087938 gttttgtgaggttgtgttaggcccaaccacgatttctaagatggtatcag 21087987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 19256907 - 19256810
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||| ||||||||||||||||||||| | |      ||| | |||||||||| ||||||||||||||| || ||||||||| ||||||||||    
T  19256907 gcctgacaatttgtttataagtgggggcaatcctcacctcacaagcaggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcag 19256810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 5932036 - 5932005
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  5932036 gcctgacaatgtgtttataagtgggggcaatc 5932005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 411
Target Start/End: Original strand, 12688305 - 12688393
Alignment:
Q  328 cctgacaatgtgtttataagtgggggcaatcttta----ttaagtaagttttgt-gggttgtgttaggcccaatcatgatttctaagat 411  Q
    ||||||||||||||||||||||||||||||| |||      |||  |||||||| |||||||| |||| |||| |||||||||||||||    
T  12688305 cctgacaatgtgtttataagtgggggcaatccttacctcacaagccagttttgtggggttgtgataggtccaaccatgatttctaagat 12688393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 15042757 - 15042726
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  15042757 gcctgacaatgtgtttataagtgggggcaatc 15042726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 35682868 - 35682837
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  35682868 gcctgacaatgtgtttataagtgggggcaatc 35682837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 38447514 - 38447483
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  38447514 gcctgacaatgtgtttataagtgggggcaatc 38447483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 39052624 - 39052593
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  39052624 gcctgacaatgtgtttataagtgggggcaatc 39052593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 39053016 - 39052985
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  39053016 gcctgacaatgtgtttataagtgggggcaatc 39052985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Original strand, 7669640 - 7669669
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  7669640 ctgacaatgtgtttataagtgggggcaatc 7669669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 7729907 - 7729969
Alignment:
Q  293 tgttaaagagtcc-acatcatataagagatggcccgcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||| |||||| ||| |||||||||    |||| ||||||||||||||||||||||||    
T  7729907 tgttaaagagtcccacatcagatatgagatggcc----tgaccatgtgtttataagtgggggcaatc 7729969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 28213135 - 28213094
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || ||||||||| ||||||||||    
T  28213135 gggttgtgttaggcccaaccacgatttctaatatggtatcag 28213094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 31197668 - 31197708
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || ||||||||||||||||||||    
T  31197668 gggttgtgttaggcccaacca-gatttctaagatggtatcag 31197708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 37001271 - 37001320
Alignment:
Q  371 gttttgtgg-gttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    ||||||||| |||||||||||||||| || |||||| |||||||||||||    
T  37001271 gttttgtggagttgtgttaggcccaaccacgatttcaaagatggtatcag 37001320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 357
Target Start/End: Original strand, 42584672 - 42584701
Alignment:
Q  328 cctgacaatgtgtttataagtgggggcaat 357  Q
    ||||||||||||||||||||||||||||||    
T  42584672 cctgacaatgtgtttataagtgggggcaat 42584701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 358
Target Start/End: Original strand, 20301261 - 20301289
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||    
T  20301261 tgacaatgtgtttataagtgggggcaatc 20301289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 358
Target Start/End: Original strand, 20301501 - 20301529
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||    
T  20301501 tgacaatgtgtttataagtgggggcaatc 20301529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 358
Target Start/End: Original strand, 21087893 - 21087921
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||    
T  21087893 tgacaatgtgtttataagtgggggcaatc 21087921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 358
Target Start/End: Original strand, 21088133 - 21088161
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||    
T  21088133 tgacaatgtgtttataagtgggggcaatc 21088161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 418
Target Start/End: Complemental strand, 31079602 - 31079566
Alignment:
Q  382 tgtgttaggcccaatcatgatttctaagatggtatca 418  Q
    ||||||||||||||| | |||||||||||||||||||    
T  31079602 tgtgttaggcccaataaagatttctaagatggtatca 31079566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 419
Target Start/End: Complemental strand, 4098482 - 4098393
Alignment:
Q  334 aatgtgtttataagtgggggcaatcttta--tta--agtaagttttgtgggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    ||||||||||||||||||||||||| | |  |||  |||  ||||||||||||||||||||||||| || |||||||||| |||||||||    
T  4098482 aatgtgtttataagtgggggcaatcctcaccttacaagttggttttgtgggttgtgttaggcccaaccacgatttctaagttggtatcag 4098393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 419
Target Start/End: Original strand, 38668125 - 38668219
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    ||||||||||||||||||||||||||||| | ||     |||  | ||||||||| ||||||||||||||||||  |||||||||||||||||||    
T  38668125 tgacaatgtgtttataagtgggggcaatcatcatctcacaagccaattttgtggggttgtgttaggcccaatcacaatttctaagatggtatcag 38668219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 417
Target Start/End: Complemental strand, 4113093 - 4112998
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatc 417  Q
    |||||||||||||||||||||||||||||||| | |      |||   |||||||||| ||||||||||||||| || ||||||||||||||||||    
T  4113093 gcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatc 4112998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 25145751 - 25145710
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| |||||||||||||||| ||||||    
T  25145751 gggttgtgttaggcccaaccatgatttctaagatgatatcag 25145710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 29266006 - 29266047
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || ||||||||||||||||||||    
T  29266006 gggttgtgttaggcccaaccacgatttctaagatggtatcag 29266047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 35772082 - 35772123
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || ||||||||||||||||||||    
T  35772082 gggttgtgttaggcccaaccacgatttctaagatggtatcag 35772123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 411
Target Start/End: Original strand, 35772261 - 35772350
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatcttta----ttaagtaagttttgt-gggttgtgttaggcccaatcatgatttctaagat 411  Q
    |||||||||||||||||||||||||||||||| |||      |||   ||||||| |||||||||||||||||| || ||||||||||||    
T  35772261 gcctgacaatgtgtttataagtgggggcaatccttacctcagaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 35772350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 2859479 - 2859448
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  2859479 gcctgacaatgtgtttataagtgggggcaatc 2859448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 15986420 - 15986389
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  15986420 gcctgacaatgtgtttataagtgggggcaatc 15986389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 419
Target Start/End: Original strand, 3169765 - 3169860
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||| ||||||||||||||||||||||| |      |||   |||||||||| ||||||||||||||| || ||||||||| ||||||||||    
T  3169765 ctgacaatttgtttataagtgggggcaatcttcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcag 3169860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 360
Target Start/End: Original strand, 16163167 - 16163197
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatctt 360  Q
    |||||||||||||||||||||||||||||||    
T  16163167 tgacaatgtgtttataagtgggggcaatctt 16163197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 419
Target Start/End: Original strand, 30369879 - 30369929
Alignment:
Q  370 agttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    ||||||||||| ||||||||||||||| || |||||||||||| |||||||    
T  30369879 agttttgtggggttgtgttaggcccaaccacgatttctaagattgtatcag 30369929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 416
Target Start/End: Original strand, 33156786 - 33156824
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtat 416  Q
    |||||||||||||||||| || |||||||||||||||||    
T  33156786 gggttgtgttaggcccaaccacgatttctaagatggtat 33156824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 358
Target Start/End: Original strand, 40079150 - 40079180
Alignment:
Q  328 cctgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||||    
T  40079150 cctgacaatgtgtttataagtgggggcaatc 40079180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 2120130 - 2120171
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    ||||||||||||| ||||||| ||||||||||||| ||||||    
T  2120130 gggttgtgttaggtccaatcacgatttctaagatgatatcag 2120171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 360
Target Start/End: Complemental strand, 17452915 - 17452882
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatctt 360  Q
    |||||||||||| |||||||||||||||||||||    
T  17452915 gcctgacaatgtatttataagtgggggcaatctt 17452882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Complemental strand, 20208611 - 20208582
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  20208611 ctgacaatgtgtttataagtgggggcaatc 20208582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 354
Target Start/End: Complemental strand, 21626457 - 21626399
Alignment:
Q  293 tgttaaagagtcc-acatcatataagagatggcccgcctgacaatgtgtttataagtgggggc 354  Q
    ||||||||||||| |||||| |||||||||||||    ||||||| |||||||||||||||||    
T  21626457 tgttaaagagtcccacatcagataagagatggcc----tgacaatatgtttataagtgggggc 21626399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Original strand, 25713392 - 25713421
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  25713392 ctgacaatgtgtttataagtgggggcaatc 25713421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Complemental strand, 26173309 - 26173280
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  26173309 ctgacaatgtgtttataagtgggggcaatc 26173280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 411
Target Start/End: Original strand, 33157274 - 33157307
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagat 411  Q
    ||||||||||||||||||||| ||||||||||||    
T  33157274 gggttgtgttaggcccaatcacgatttctaagat 33157307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 39348383 - 39348343
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || ||||||||||||||||||||    
T  39348383 gggttgtgttaggcccaa-cacgatttctaagatggtatcag 39348343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 51589859 - 51589900
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || ||||||||| ||||||||||    
T  51589859 gggttgtgttaggcccaaccacgatttctaatatggtatcag 51589900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 358
Target Start/End: Complemental strand, 8870773 - 8870745
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||    
T  8870773 tgacaatgtgtttataagtgggggcaatc 8870745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 26173541 - 26173513
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaat 357  Q
    |||||||||||||||||||||||||||||    
T  26173541 ctgacaatgtgtttataagtgggggcaat 26173513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 358
Target Start/End: Original strand, 38668360 - 38668388
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||    
T  38668360 tgacaatgtgtttataagtgggggcaatc 38668388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 27036499 - 27036405
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatctt-tattaagtaagttttgt-gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||| |||||||||||||||||||||   |  ||||   ||||||| |||||||||||||||||| |||||||||||| ||||||||||    
T  27036499 gcctgacaatttgtttataagtgggggcaatcccctcataagccggttttgtagggttgtgttaggcccaaccatgatttctaatatggtatcag 27036405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 93658 - 93617
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || ||||||||||||||||||||    
T  93658 gggttgtgttaggcccaaccacgatttctaagatggtatcag 93617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 5509132 - 5509173
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  5509132 gggttgtgttaggcccaaccatgatttctaatatggtatcag 5509173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 28407832 - 28407783
Alignment:
Q  371 gttttgtgg-gttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    ||||||||| |||||||||||||||| || ||||||||||||||||||||    
T  28407832 gttttgtggagttgtgttaggcccaaccacgatttctaagatggtatcag 28407783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 40379475 - 40379434
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || ||||||||||||||||||||    
T  40379475 gggttgtgttaggcccaaccacgatttctaagatggtatcag 40379434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 5711526 - 5711495
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  5711526 gcctgacaatgtgtttataagtgggggcaatc 5711495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 5711762 - 5711731
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  5711762 gcctgacaatgtgtttataagtgggggcaatc 5711731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 14466497 - 14466400
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatcttta--tta--agtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    ||||||||||||||||||||||||| |||||| | |  |||  ||   |||||||||| ||||||||||||||| ||  |||||||||||||||||||    
T  14466497 gcctgacaatgtgtttataagtgggagcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcag 14466400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 411
Target Start/End: Original strand, 14927100 - 14927188
Alignment:
Q  328 cctgacaatgtgtttataagtgggggcaatctt----tattaagtaagttttgtg-ggttgtgttaggcccaatcatgatttctaagat 411  Q
    ||||||||||||||||||||||||||||||| |    |  ||||| || |||||| ||||||||||||| ||| || ||||||||||||    
T  14927100 cctgacaatgtgtttataagtgggggcaatcctcacctcataagtcagctttgtgtggttgtgttaggctcaaccacgatttctaagat 14927188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Original strand, 16533544 - 16533575
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  16533544 gcctgacaatgtgtttataagtgggggcaatc 16533575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Original strand, 17719397 - 17719428
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  17719397 gcctgacaatgtgtttataagtgggggcaatc 17719428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 358
Target Start/End: Complemental strand, 37812584 - 37812554
Alignment:
Q  328 cctgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||||    
T  37812584 cctgacaatgtgtttataagtgggggcaatc 37812554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 93385 - 93344
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || ||||| ||||||||||||||    
T  93385 gggttgtgttaggcccaaccacgatttttaagatggtatcag 93344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 2029822 - 2029863
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    ||||||| |||||||||| || ||||||||||||||||||||    
T  2029822 gggttgttttaggcccaaccacgatttctaagatggtatcag 2029863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 10571023 - 10571064
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||| ||| || ||||||||||||||||||||    
T  10571023 gggttgtgttaggctcaaccacgatttctaagatggtatcag 10571064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 15124814 - 15124773
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||| ||||| || ||||||||||||||||||||    
T  15124814 gggttgtgttagacccaaccacgatttctaagatggtatcag 15124773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 16419320 - 16419361
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    ||||||| |||||||||| || ||||||||||||||||||||    
T  16419320 gggttgtattaggcccaaccacgatttctaagatggtatcag 16419361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Original strand, 16419501 - 16419530
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  16419501 ctgacaatgtgtttataagtgggggcaatc 16419530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Complemental strand, 17525423 - 17525394
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  17525423 ctgacaatgtgtttataagtgggggcaatc 17525394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 21383709 - 21383660
Alignment:
Q  371 gttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||| ||| ||||||||||| || ||||||||||||||||||||    
T  21383709 gttttgtgggattgagttaggcccaaccacgatttctaagatggtatcag 21383660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 355
Target Start/End: Complemental strand, 93210 - 93182
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggca 355  Q
    |||||||||||||||||||||||||||||    
T  93210 gcctgacaatgtgtttataagtgggggca 93182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 27897637 - 27897597
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatca 418  Q
    |||||||||||||||||| ||  ||||||||||||||||||    
T  27897637 gggttgtgttaggcccaaccaccatttctaagatggtatca 27897597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 358
Target Start/End: Original strand, 32356386 - 32356414
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||    
T  32356386 tgacaatgtgtttataagtgggggcaatc 32356414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 416
Target Start/End: Complemental strand, 33381232 - 33381184
Alignment:
Q  369 aagttttgtg-ggttgtgttaggcccaatcatgatttctaagatggtat 416  Q
    |||||||||| ||||||||||| ||||| || |||||||||||||||||    
T  33381232 aagttttgtgaggttgtgttagtcccaaccacgatttctaagatggtat 33381184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.00000000001; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 48243524 - 48243427
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatctttat----taagtaagttttgt-gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||||||||||||||||| | ||     |||   ||||||| |||||||||||| ||||| |||||||| ||||||||||||||    
T  48243524 gcctgacaatgtgtttataagtgggggcaatcctcatcttacaagccggttttgtggggttgtgttagacccaaccatgatttttaagatggtatcag 48243427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 410
Target Start/End: Original strand, 6634852 - 6634940
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatctttat----taagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaaga 410  Q
    |||||||||| ||||||||||||||||||||| | |     ||||  ||||||||||| ||||||||||||||| ||||||||||||||    
T  6634852 gcctgacaatttgtttataagtgggggcaatcctcacctcataagctagttttgtggggttgtgttaggcccaaccatgatttctaaga 6634940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 328 - 419
Target Start/End: Original strand, 25620134 - 25620230
Alignment:
Q  328 cctgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    ||||||||||||||||||||||||||||||| | |      |||   |||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  25620134 cctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcag 25620230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 419
Target Start/End: Original strand, 29469602 - 29469699
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatcttta--tt--aagtaagttttgt-gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||||||||||||||||| | |  ||  |||   ||||||| |||||||||||||||||| || ||||||||| ||||||||||    
T  29469602 gcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcag 29469699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 10882270 - 10882229
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || ||||||||||||||||||||    
T  10882270 gggttgtgttaggcccaaccacgatttctaagatggtatcag 10882229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 33996350 - 33996301
Alignment:
Q  371 gttttgtgg-gttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    ||||||||| |||||||||||||||| || ||||||||||||||||||||    
T  33996350 gttttgtggagttgtgttaggcccaaccacgatttctaagatggtatcag 33996301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 40121955 - 40121914
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || ||||||||||||||||||||    
T  40121955 gggttgtgttaggcccaaccacgatttctaagatggtatcag 40121914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 379 - 419
Target Start/End: Original strand, 4886383 - 4886423
Alignment:
Q  379 ggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    ||||||||||||||||| || ||||||||||||||||||||    
T  4886383 ggttgtgttaggcccaaccacgatttctaagatggtatcag 4886423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 372 - 419
Target Start/End: Original strand, 21821852 - 21821900
Alignment:
Q  372 ttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    ||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  21821852 ttttgtgggattgtgttaggcccaaccacgatttctaagatggtatcag 21821900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 419
Target Start/End: Original strand, 21861291 - 21861388
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatcttta--tta--agtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    ||||||||||||||||||||||| |||||||| | |  |||  ||   |||||||||| ||||||||||||||| ||  |||||||||||||||||||    
T  21861291 gcctgacaatgtgtttataagtgagggcaatcctcaccttacaagccggttttgtgggattgtgttaggcccaaccaccatttctaagatggtatcag 21861388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Original strand, 21861526 - 21861557
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  21861526 gcctgacaatgtgtttataagtgggggcaatc 21861557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Original strand, 29469837 - 29469868
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  29469837 gcctgacaatgtgtttataagtgggggcaatc 29469868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 31485511 - 31485480
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  31485511 gcctgacaatgtgtttataagtgggggcaatc 31485480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 410
Target Start/End: Original strand, 34027624 - 34027712
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaaga 410  Q
    |||||||||| ||||||||||||||||||||| | | |    |||   |||||||||| |||||||||||||||||| |||||||||||    
T  34027624 gcctgacaatttgtttataagtgggggcaatcctcacttcacaagccggttttgtggggttgtgttaggcccaatcacgatttctaaga 34027712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 36277313 - 36277282
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  36277313 gcctgacaatgtgtttataagtgggggcaatc 36277282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 43688246 - 43688215
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  43688246 gcctgacaatgtgtttataagtgggggcaatc 43688215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 419
Target Start/End: Complemental strand, 31257352 - 31257257
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||| | ||||||||||||||||||| ||| |    |||   |||||||||| ||||||||||||||| || ||||||||| ||||||||||    
T  31257352 ctgacaatttatttataagtgggggcaatccttaattcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcag 31257257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Complemental strand, 2404259 - 2404230
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  2404259 ctgacaatgtgtttataagtgggggcaatc 2404230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 411
Target Start/End: Complemental strand, 3038115 - 3038082
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagat 411  Q
    |||||||||||||||||| |||||||||||||||    
T  3038115 gggttgtgttaggcccaaccatgatttctaagat 3038082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Complemental strand, 3520125 - 3520096
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  3520125 ctgacaatgtgtttataagtgggggcaatc 3520096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Original strand, 4454775 - 4454804
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  4454775 ctgacaatgtgtttataagtgggggcaatc 4454804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Complemental strand, 26240001 - 26239972
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  26240001 ctgacaatgtgtttataagtgggggcaatc 26239972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 360
Target Start/End: Complemental strand, 26562160 - 26562127
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatctt 360  Q
    |||||||||| |||||||||||||||||||||||    
T  26562160 gcctgacaatttgtttataagtgggggcaatctt 26562127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 33834244 - 33834285
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| ||  |||||||||||||||||||    
T  33834244 gggttgtgttaggcccaaccaccatttctaagatggtatcag 33834285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 411
Target Start/End: Complemental strand, 36993105 - 36993072
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagat 411  Q
    |||||||||||||||||| |||||||||||||||    
T  36993105 gggttgtgttaggcccaaccatgatttctaagat 36993072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Complemental strand, 48243146 - 48243117
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  48243146 ctgacaatgtgtttataagtgggggcaatc 48243117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 410
Target Start/End: Complemental strand, 7786285 - 7786253
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaaga 410  Q
    |||||||||||||||||| ||||||||||||||    
T  7786285 gggttgtgttaggcccaaccatgatttctaaga 7786253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 358
Target Start/End: Complemental strand, 35308230 - 35308202
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||    
T  35308230 tgacaatgtgtttataagtgggggcaatc 35308202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 419
Target Start/End: Original strand, 9705017 - 9705114
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatctt----tattaagtaagttttgt-gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||||||||||||||||| |    |   ||||  ||||||| |||||||||||||||||| ||  |||||||||||||||||||    
T  9705017 gcctgacaatgtgtttataagtgggggcaatcatcacctcacaagtcggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcag 9705114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 419
Target Start/End: Original strand, 13353198 - 13353295
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatcttta--tt--aagtaagttttgt-gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||||||||||||||||| | |  ||  |||   ||||||| |||||||||||||||||| ||  |||||||||||||||||||    
T  13353198 gcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcag 13353295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 419
Target Start/End: Original strand, 33796323 - 33796420
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatcttta--tt--aagtaagttttgt-gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||||||||||||||||| | |  ||  |||   ||||||| |||||||||||||||||| ||  |||||||||||||||||||    
T  33796323 gcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcag 33796420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 4868844 - 4868803
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || ||||||||||||||||||||    
T  4868844 gggttgtgttaggcccaaccacgatttctaagatggtatcag 4868803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 4868664 - 4868633
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  4868664 gcctgacaatgtgtttataagtgggggcaatc 4868633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Original strand, 31961175 - 31961206
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  31961175 gcctgacaatgtgtttataagtgggggcaatc 31961206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 419
Target Start/End: Complemental strand, 8001582 - 8001540
Alignment:
Q  377 tgggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    ||||||||||||||||||| ||  |||||||||||||||||||    
T  8001582 tgggttgtgttaggcccaaccacaatttctaagatggtatcag 8001540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 410
Target Start/End: Original strand, 16570157 - 16570244
Alignment:
Q  328 cctgacaatgtgtttataagtgggggcaatctt----tattaagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaaga 410  Q
    |||||||||||||||||||| ||||| |||| |    ||  ||||  |||||||||| ||||||||||||||| ||||||||||||||    
T  16570157 cctgacaatgtgtttataagcgggggtaatcctcacgtaacaagtcggttttgtggggttgtgttaggcccaaccatgatttctaaga 16570244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 3680065 - 3680106
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| ||  |||||||||||||||||||    
T  3680065 gggttgtgttaggcccaaccacaatttctaagatggtatcag 3680106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Original strand, 3680245 - 3680274
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  3680245 ctgacaatgtgtttataagtgggggcaatc 3680274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Complemental strand, 6543028 - 6542999
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  6543028 ctgacaatgtgtttataagtgggggcaatc 6542999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 8026442 - 8026483
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || ||||||||| ||||||||||    
T  8026442 gggttgtgttaggcccaaccacgatttctaatatggtatcag 8026483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 12330218 - 12330169
Alignment:
Q  371 gttttgtg-ggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||| ||||||||||||||||| || ||||||||| ||||||||||    
T  12330218 gttttgtgaggttgtgttaggcccaaccacgatttctaatatggtatcag 12330169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 15082183 - 15082134
Alignment:
Q  371 gttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||| ||||||||||||||| || ||||||||| ||||||||||    
T  15082183 gttttgtgggattgtgttaggcccaaacacgatttctaatatggtatcag 15082134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 20373623 - 20373664
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || ||||| ||||||||||||||    
T  20373623 gggttgtgttaggcccaaccacgatttataagatggtatcag 20373664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 27653262 - 27653311
Alignment:
Q  371 gttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||| ||||||||||||||| || ||||||||| ||||||||||    
T  27653262 gttttgtgggattgtgttaggcccaaccacgatttctaatatggtatcag 27653311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 30256631 - 30256672
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || |||||||||| |||||||||    
T  30256631 gggttgtgttaggcccaaccacgatttctaaggtggtatcag 30256672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 30256865 - 30256906
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || ||||||||| ||||||||||    
T  30256865 gggttgtgttaggcccaaccacgatttctaatatggtatcag 30256906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 33494592 - 33494633
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| ||  |||||||||||||||||||    
T  33494592 gggttgtgttaggcccaaccaccatttctaagatggtatcag 33494633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 414
Target Start/End: Original strand, 11085626 - 11085670
Alignment:
Q  371 gttttgtg-ggttgtgttaggcccaatcatgatttctaagatggt 414  Q
    |||||||| |||||||||||| ||||||| |||||||||||||||    
T  11085626 gttttgtgcggttgtgttaggtccaatcacgatttctaagatggt 11085670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 379 - 419
Target Start/End: Complemental strand, 52827455 - 52827415
Alignment:
Q  379 ggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  52827455 ggttgtgttaggcccaaccatgatttctaagatggtatcag 52827415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 328 - 419
Target Start/End: Original strand, 52559565 - 52559661
Alignment:
Q  328 cctgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    ||||||||||||||||||||||||||||||| | |      |||   |||||||||| ||||||||||||||| ||||||||||||||| |||||||    
T  52559565 cctgacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatagtatcag 52559661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 358
Target Start/End: Complemental strand, 44118986 - 44118915
Alignment:
Q  284 agaaaaacatgttaaagagtcc-acatcatataagagatggcccgcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||| |||||||||||||| |||||  |||||||||||||    |||||||||||||||||||||||| ||||    
T  44118986 agaaaaaaatgttaaagagtcccacatcggataagagatggcc----tgacaatgtgtttataagtgggggtaatc 44118915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 12869294 - 12869253
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || ||||||||||||||||||||    
T  12869294 gggttgtgttaggcccaaccacgatttctaagatggtatcag 12869253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 17111616 - 17111657
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || ||||||||||||||||||||    
T  17111616 gggttgtgttaggcccaaccacgatttctaagatggtatcag 17111657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 22231339 - 22231298
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || ||||||||||||||||||||    
T  22231339 gggttgtgttaggcccaaccacgatttctaagatggtatcag 22231298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 35788712 - 35788753
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || ||||||||||||||||||||    
T  35788712 gggttgtgttaggcccaaccacgatttctaagatggtatcag 35788753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 40716652 - 40716611
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  40716652 gggttgtgttaggcccaaccatggtttctaagatggtatcag 40716611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 40717472 - 40717431
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || ||||||||||||||||||||    
T  40717472 gggttgtgttaggcccaaccacgatttctaagatggtatcag 40717431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Original strand, 9279224 - 9279255
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  9279224 gcctgacaatgtgtttataagtgggggcaatc 9279255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 11036833 - 11036802
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  11036833 gcctgacaatgtgtttataagtgggggcaatc 11036802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Original strand, 22863471 - 22863502
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  22863471 gcctgacaatgtgtttataagtgggggcaatc 22863502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 27634168 - 27634137
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  27634168 gcctgacaatgtgtttataagtgggggcaatc 27634137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 28245613 - 28245582
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  28245613 gcctgacaatgtgtttataagtgggggcaatc 28245582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 31254494 - 31254463
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  31254494 gcctgacaatgtgtttataagtgggggcaatc 31254463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Original strand, 35788656 - 35788687
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  35788656 gcctgacaatgtgtttataagtgggggcaatc 35788687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Original strand, 35788891 - 35788922
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  35788891 gcctgacaatgtgtttataagtgggggcaatc 35788922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 39902650 - 39902619
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  39902650 gcctgacaatgtgtttataagtgggggcaatc 39902619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 1518217 - 1518258
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    ||||||||||||||| || || ||||||||||||||||||||    
T  1518217 gggttgtgttaggcctaaccacgatttctaagatggtatcag 1518258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 9685443 - 9685492
Alignment:
Q  371 gttttgtg-ggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||| ||||||||||||||||| || ||||||||| ||||||||||    
T  9685443 gttttgtgaggttgtgttaggcccaaccacgatttctaatatggtatcag 9685492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 14783218 - 14783177
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || ||||||||| ||||||||||    
T  14783218 gggttgtgttaggcccaaccacgatttctaatatggtatcag 14783177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 24513391 - 24513350
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    ||||||||||||||||||||| ||||||||| ||| ||||||    
T  24513391 gggttgtgttaggcccaatcacgatttctaacatgatatcag 24513350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 25052905 - 25052946
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || ||||||||| ||||||||||    
T  25052905 gggttgtgttaggcccaaccacgatttctaacatggtatcag 25052946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 35609742 - 35609701
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    ||||||||| || ||||| |||||||||||||||||||||||    
T  35609742 gggttgtgtaagacccaaccatgatttctaagatggtatcag 35609701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Complemental strand, 35645850 - 35645821
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  35645850 ctgacaatgtgtttataagtgggggcaatc 35645821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 50543361 - 50543320
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || ||||||||||||| ||||||    
T  50543361 gggttgtgttaggcccaaccacgatttctaagatgttatcag 50543320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 50543606 - 50543557
Alignment:
Q  371 gttttgtgg-gttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    ||||||||| |||||||||||||||| || ||||||||||||| ||||||    
T  50543606 gttttgtggagttgtgttaggcccaaccacgatttctaagatgatatcag 50543557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 53828554 - 53828513
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| ||  |||||||||||||||||||    
T  53828554 gggttgtgttaggcccaaccacaatttctaagatggtatcag 53828513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 410
Target Start/End: Original strand, 7926611 - 7926643
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaaga 410  Q
    |||||||||||||||||| ||||||||||||||    
T  7926611 gggttgtgttaggcccaaccatgatttctaaga 7926643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 418
Target Start/End: Original strand, 23209894 - 23209934
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatca 418  Q
    |||||| |||||||||||||| ||||||||||||| |||||    
T  23209894 gggttgagttaggcccaatcacgatttctaagatgatatca 23209934  T

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Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 358
Target Start/End: Complemental strand, 28246169 - 28246141
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||    
T  28246169 tgacaatgtgtttataagtgggggcaatc 28246141  T

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Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 358
Target Start/End: Complemental strand, 35796826 - 35796798
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||    
T  35796826 tgacaatgtgtttataagtgggggcaatc 35796798  T

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Target: scaffold0083 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 421
Target Start/End: Original strand, 51236 - 51332
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagtg 421  Q
    ||||||||||||||||||||||||||||| | |      |||| ||||||||||| |||||||| || ||||||  |||||||||||||||||||||    
T  51236 tgacaatgtgtttataagtgggggcaatcctcacctcacaagtcagttttgtggggttgtgttatgctcaatcacaatttctaagatggtatcagtg 51332  T

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Target: scaffold0048 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 419
Target Start/End: Original strand, 81839 - 81936
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatcttta--tta--agtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||| ||||||||||||||| |||| || |  |||  |||  |||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  81839 gcctgacaatatgtttataagtggggacaattttcaccttacaagtcggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcag 81936  T

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Target: scaffold0692 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 419
Target Start/End: Complemental strand, 5839 - 5744
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||||||||||||||| | ||     |||   |||||| ||| ||||||||||||||| || ||||||||||||||||||||    
T  5839 ctgacaatgtgtttataagtgggggcaatcctcatctcacaagccggttttgcggggttgtgttaggcccaaccacgatttctaagatggtatcag 5744  T

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Target: scaffold0692; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 358
Target Start/End: Complemental strand, 5628 - 5600
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||    
T  5628 tgacaatgtgtttataagtgggggcaatc 5600  T

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Target: scaffold0519 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 419
Target Start/End: Original strand, 1915 - 2010
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatcttta--tt--aagtaagttttgt-gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||||||||||||||| | |  ||  |||   ||||||| |||||||||||||||||| ||  |||||||||||||||||||    
T  1915 ctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcag 2010  T

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Target: scaffold0519; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Original strand, 2148 - 2179
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  2148 gcctgacaatgtgtttataagtgggggcaatc 2179  T

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Target: scaffold0766 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Original strand, 6273 - 6302
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  6273 ctgacaatgtgtttataagtgggggcaatc 6302  T

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Target: scaffold0481 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 3502 - 3461
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||| |||||||| ||||||||| ||||||||||    
T  3502 gggttgtgttagacccaatcacgatttctaatatggtatcag 3461  T

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Target: scaffold0129 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 14356 - 14397
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || | ||||||||||||||||||    
T  14356 gggttgtgttaggcccaaccacgttttctaagatggtatcag 14397  T

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Target: scaffold0092 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 5708 - 5749
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||| ||||| || ||||||||||||||||||||    
T  5708 gggttgtgttagacccaaccacgatttctaagatggtatcag 5749  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 56512 - 56553
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| || ||||||||| ||||||||||    
T  56512 gggttgtgttaggcccaaccacgatttctaatatggtatcag 56553  T

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Target: scaffold0005; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 410
Target Start/End: Complemental strand, 288696 - 288656
Alignment:
Q  371 gttttgtgg-gttgtgttaggcccaatcatgatttctaaga 410  Q
    ||||||||| |||||||||||||||| ||||||||||||||    
T  288696 gttttgtggagttgtgttaggcccaaccatgatttctaaga 288656  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 355
Target Start/End: Original strand, 429870 - 429898
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggca 355  Q
    |||||||||||||||||||||||||||||    
T  429870 gcctgacaatgtgtttataagtgggggca 429898  T

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