View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5967_low_9 (Length: 263)
Name: NF5967_low_9
Description: NF5967
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5967_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 2240999 - 2240767
Alignment:
| Q |
18 |
ctaacctgttcaatgatcttgcagaagaagatcgcaatgatagagaacttccaaagcctctgaccatattttctttcatgggattataagaagaaacaga |
117 |
Q |
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| T |
2240999 |
ctaacctgttcaatgatcttgcagaagaagatcgcaatgatagagaacttccaaagcctctgaccatattttctttcatgggattataagaagaaacaga |
2240900 |
T |
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| Q |
118 |
tgagatatcatcccttgagctgtcataaccgtcctcgacaccatcataaatatcatttgctctaacctgtaaagaaattaattattatcttttacatcaa |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2240899 |
tgagatatcatcccttgagctgtcataaccgtcctcgacaccatcataaatatcatttgctctaacctgtaaagaaattaattattatcttttacatcaa |
2240800 |
T |
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| Q |
218 |
tagtnnnnnnnnntgcacagcaagcagtaagta |
250 |
Q |
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|||| |||||||||||||||||||| |
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| T |
2240799 |
tagtaaaaaaaaatgcacagcaagcagtaagta |
2240767 |
T |
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