View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5969-Insertion-6 (Length: 230)
Name: NF5969-Insertion-6
Description: NF5969
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5969-Insertion-6 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 9 - 230
Target Start/End: Original strand, 8467671 - 8467892
Alignment:
| Q |
9 |
gcttgaacttctcgtccatgtatttcgctatagcgtaagggcttgagccattcctctcctttagagccagtaaagcctccttaaccatctacaaaaataa |
108 |
Q |
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| T |
8467671 |
gcttgaacttctcgtccatgtatttcgctatagcgtaagggcttgagccattcctctcctttagagccagtaaagcctccttaaccatctacaaaaataa |
8467770 |
T |
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| Q |
109 |
ataagtatacgcttaaatcaaccagtagtttgaaactatattgaaagtttgaaacaattacctcaaaatatggaggatgagaagctgttttggtttgttt |
208 |
Q |
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| T |
8467771 |
ataagtatacgcttaaatcaaccagaagtttgaaactatattgaaagtttgaaacaattacctcaaaatatggaggatgagaagctgttttggtttgttt |
8467870 |
T |
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| Q |
209 |
ggaagcttttggtttcatttcc |
230 |
Q |
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| T |
8467871 |
ggaagcttttggtttcatttcc |
8467892 |
T |
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