View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5969_low_4 (Length: 263)
Name: NF5969_low_4
Description: NF5969
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5969_low_4 |
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Alignment Details
Target: chr5 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 19 - 250
Target Start/End: Original strand, 8467671 - 8467902
Alignment:
| Q |
19 |
gcttgaacttctcgtccatgtatttcgctatagcgtaagggcttgagccattcctctcctttagagccagtaaagcctccttaaccatctacaaaaataa |
118 |
Q |
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| T |
8467671 |
gcttgaacttctcgtccatgtatttcgctatagcgtaagggcttgagccattcctctcctttagagccagtaaagcctccttaaccatctacaaaaataa |
8467770 |
T |
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| Q |
119 |
ataagtatacgcttaaatcaaccagtagtttgaaactatattgaaagtttgaaacaattacctcaaaatatggaggatgagaagctgttttggtttgttt |
218 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8467771 |
ataagtatacgcttaaatcaaccagaagtttgaaactatattgaaagtttgaaacaattacctcaaaatatggaggatgagaagctgttttggtttgttt |
8467870 |
T |
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| Q |
219 |
ggaagcttttggtttcatttccttcacaggtt |
250 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
8467871 |
ggaagcttttggtttcatttccttcacaggtt |
8467902 |
T |
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