View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5970-Insertion-12 (Length: 370)
Name: NF5970-Insertion-12
Description: NF5970
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5970-Insertion-12 |
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Alignment Details
Target: chr4 (Bit Score: 335; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 8 - 362
Target Start/End: Complemental strand, 51507944 - 51507590
Alignment:
| Q |
8 |
agtaagcagccatttatttaaaacttgaacttttacttgcggaaaaagatatagtgatattgttattgacagtgtcagagtgtgatttttaatagtcatg |
107 |
Q |
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| T |
51507944 |
agtaagcagccatttatttaaaacttgaacttttacttggggaaaaagatatagtgatattgttattgacagtgtcagagtgtgatttttaatagtcatg |
51507845 |
T |
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| Q |
108 |
catatagatcttgagttttttgaacaaatagatttttgattttggttgccatttgaacaatataattctatcatgttatattatgattaaaaactaattt |
207 |
Q |
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| T |
51507844 |
catatagatcttgagttttttgaacaaataggtttttgattttggtttccatttgaacaatataattctatcatgttatattatgattaaaaactaattt |
51507745 |
T |
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| Q |
208 |
tatattgatgtacccgtacggctccccatacctgaaggaatacatgataataggaaattctagatacctatgaaagtcacgataagaaaatctaggtgtc |
307 |
Q |
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| T |
51507744 |
tatattgatgtacccgtacagctccccatacctgaaggaatacatgataataggaaattctagatacctatgaaagtcacgataagaaaatctaggtgtc |
51507645 |
T |
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| Q |
308 |
tcactcataatttcttattggccattctgaatacactgcaatttttgtcttgtta |
362 |
Q |
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| T |
51507644 |
tcactcataatttcttattggccattctgaatacactgcaatttttgtcatgtta |
51507590 |
T |
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