View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5970-Insertion-14 (Length: 277)
Name: NF5970-Insertion-14
Description: NF5970
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5970-Insertion-14 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 9 - 277
Target Start/End: Original strand, 55381975 - 55382254
Alignment:
| Q |
9 |
aataggtacgttccttactagttgaggagagacatgttgtgttgtgtctgtgtcatattgttattgtt-----------attacaaatacaaactttaat |
97 |
Q |
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| T |
55381975 |
aataggtacgttccttactagttgaggagagacatgttgtgttgtgtctgtgtcatattgttattgttattgttatgttattacaaatacaaactttaat |
55382074 |
T |
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| Q |
98 |
ttgcttatgtttaattcataacacaccatctcccggctccttcatttatgccacatgacctattattgttacacttcaactaccaactaattcaactctt |
197 |
Q |
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| T |
55382075 |
ttgcttatgtttaattcataacacaccatctcccggctacttcatttatggcacatgacctattattgttacacttcaactaccaactaattcaactctt |
55382174 |
T |
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| Q |
198 |
tcatttactcaatatgcatgggatacaatgcttttttaattatagataaacaaaaccaacttcacgtaataatttcccgt |
277 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
55382175 |
tcatttactcaacatgcatgggatacaatgcttttttaattatagataaacaaaaccaacttcacgtaataatttcccgt |
55382254 |
T |
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