View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5970-Insertion-7 (Length: 593)

Name: NF5970-Insertion-7
Description: NF5970
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5970-Insertion-7
NF5970-Insertion-7
[»] chr8 (3 HSPs)
chr8 (9-593)||(31408979-31409569)
chr8 (345-397)||(11637898-11637950)
chr8 (345-397)||(32855556-32855608)
[»] chr1 (5 HSPs)
chr1 (267-500)||(7268560-7268792)
chr1 (40-84)||(41447744-41447788)
chr1 (32-85)||(27650193-27650246)
chr1 (301-378)||(45265286-45265363)
chr1 (345-469)||(30385242-30385366)
[»] chr6 (6 HSPs)
chr6 (333-481)||(10599608-10599756)
chr6 (295-397)||(26567189-26567290)
chr6 (297-401)||(31869848-31869952)
chr6 (345-402)||(3623807-3623864)
chr6 (297-378)||(7831351-7831432)
chr6 (323-392)||(33821418-33821487)
[»] chr3 (5 HSPs)
chr3 (247-342)||(54743908-54744003)
chr3 (364-457)||(19901640-19901736)
chr3 (297-378)||(21370221-21370301)
chr3 (328-378)||(42225329-42225379)
chr3 (365-401)||(42049867-42049903)
[»] chr4 (5 HSPs)
chr4 (292-402)||(10550534-10550644)
chr4 (346-397)||(11794624-11794675)
chr4 (345-392)||(29585939-29585986)
chr4 (320-378)||(42154951-42155009)
chr4 (345-397)||(50205859-50205911)
[»] chr2 (2 HSPs)
chr2 (300-397)||(13533036-13533133)
chr2 (293-402)||(2183002-2183111)
[»] chr5 (2 HSPs)
chr5 (33-77)||(33568107-33568151)
chr5 (335-401)||(3050867-3050933)
[»] chr7 (2 HSPs)
chr7 (301-378)||(33010331-33010408)
chr7 (333-398)||(43213678-43213743)


Alignment Details
Target: chr8 (Bit Score: 422; Significance: 0; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 422; E-Value: 0
Query Start/End: Original strand, 9 - 593
Target Start/End: Complemental strand, 31409569 - 31408979
Alignment:
Q  9 tgacaaaacaaccatgttaaaattgggtgagtgaatgtgattttgaaaagggttaaaattgatattttttattgtttttatgtggtaggtataattgtta 108  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  31409569 tgacaaaacaaccatgttaaaattggatgagtgaatgtgattttgaaaagggttaaaattgatatttttgattgtttatatgtggtaggtataattgtta 31409470  T
Q  109 gggcatatggtnnnnnnnnttcaaaaacaa-tagtgaagccaggtgttttaaattgtgttgaacaaaaagttgatcacatctacttgtctatgtgagcat 207  Q
    |||||||||||        ||||||||||| |||||||||||| |||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  31409469 gggcatatggtaaaaaat-ttcaaaaacaaatagtgaagccagatgttttgaattgcgttgaacaaaaagttgatcatatctacttgtctatgtgagcat 31409371  T
Q  208 ctctagttatgatctatgattcaattatttaatttatttaatactacttcatctgtcctaaaataattgtcacggtttaacctttacatatgtcaatgca 307  Q
    |||  ||||||| | ||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||    
T  31409370 ctccggttatgagccatgattcaattatttaattcatttaatactactttatatgtcctaaaataattgtcacggtttaacatttacatatgtcaatgca 31409271  T
Q  308 caactttgattattgatatgtttagttatttattagcaaaaattataaatagttggtattttaaaaatatttgttgagataaatcg---aacatcttatt 404  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||   |||||||||||    
T  31409270 caactttgattattgatatgtttagatatttattagcaaaaattataaatagttggtattttaaaaatattcgttgagataaatcgaacaacatcttatt 31409171  T
Q  405 tacaactatttctctttatgtattagtaaaacaatatagtccaagtagattatgtgaataatgcatatgatcaaactatgacaattattttaagattgaa 504  Q
     |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  31409170 cacaattatttctctttatgtattagtaaaacaatatagtccaaatagattatgtgaataatgaatatgatcaaactgtgacaattattttaaaattgaa 31409071  T
Q  505 ggggtaataaattgttttaa-ttttagagcaaatacatttgacttttgttataa--agagagcataaatttgaattttatcatgtattgtat 593  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||| |||||||| |||||||||||||    
T  31409070 ggggtaataaattgttttaacttttagagcaaatacatttgacttttgttataaagagagagcataaatatgaattttttcatgtattgtat 31408979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 345 - 397
Target Start/End: Complemental strand, 11637950 - 11637898
Alignment:
Q  345 aaaaattataaatagttggtattttaaaaatatttgttgagataaatcgaaca 397  Q
    |||||||||||| | ||  |||||||||||||||||| |||||||||| ||||    
T  11637950 aaaaattataaaaatttaatattttaaaaatatttgtcgagataaatcaaaca 11637898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 345 - 397
Target Start/End: Original strand, 32855556 - 32855608
Alignment:
Q  345 aaaaattataaatagttggtattttaaaaatatttgttgagataaatcgaaca 397  Q
    |||||||||||| | ||| |||||||||||||||| |||||| ||||| ||||    
T  32855556 aaaaattataaaaatttgatattttaaaaatatttattgagacaaatcaaaca 32855608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 2e-26; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 267 - 500
Target Start/End: Complemental strand, 7268792 - 7268560
Alignment:
Q  267 aaaataattgtcacggtttaaccttt-acatatgtcaatgcacaactttgattattgatatgtttagttatttattagcaaaaattataaatagttggta 365  Q
    |||||||||||||| ||||   |||| ||| ||||||||||||||||||||  ||| |||| |||  |||| ||||||||||||||||||| ||||| ||    
T  7268792 aaaataattgtcacagttttgactttgacacatgtcaatgcacaactttgaccattaatatctttcattatatattagcaaaaattataaaaagttgata 7268693  T
Q  366 tttta-aaaatatttgttgagataaatcgaacatcttatttacaactatttctctttatgtattagtaaaacaatatagtccaagtagattatgtgaata 464  Q
    ||||| ||||||||  |||||| ||||||||||| ||||| ||||  |||| |||||||    ||||| || ||||| ||| ||  ||||||||||||||    
T  7268692 ttttaaaaaatattcattgagacaaatcgaacattttattcacaaacatttgtctttat---atagtacaaaaatatggtcaaacgagattatgtgaata 7268596  T
Q  465 atgcatatgatcaaactatgacaattattttaagat 500  Q
     |||| | | ||||| | ||||||||||||| ||||    
T  7268595 gtgcacacggtcaaattgtgacaattattttgagat 7268560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 41447788 - 41447744
Alignment:
Q  40 tgaatgtgattttgaaaagggttaaaattgatattttttattgtt 84  Q
    |||||||||||||| ||| ||||||||||||||||||| ||||||    
T  41447788 tgaatgtgattttggaaaaggttaaaattgatatttttaattgtt 41447744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 27650246 - 27650193
Alignment:
Q  32 tgggtgagtgaatgtgattttgaaaagggttaaaattgatattttttattgttt 85  Q
    ||||||| ||| | ||||||||||  ||||||||||||||||||||||| ||||    
T  27650246 tgggtgaatgagtatgattttgaacggggttaaaattgatattttttatggttt 27650193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 378
Target Start/End: Complemental strand, 45265363 - 45265286
Alignment:
Q  301 caatgcacaactttgattattgatatgtttagttatttattagcaaaaattataaatagttggtattttaaaaatatt 378  Q
    ||||| ||| |||||||  || |||| |||| |||| ||||||||||||||||||| | ||| |||||| ||||||||    
T  45265363 caatgaacatctttgatctttaatatctttaattatgtattagcaaaaattataaaaatttgatattttgaaaatatt 45265286  T

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Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 345 - 469
Target Start/End: Original strand, 30385242 - 30385366
Alignment:
Q  345 aaaaattataaatagttggtattttaaaaatatttgttgagataaatcgaacatcttatttacaactatttctctttatgtattagtaaaacaatatagt 444  Q
    ||||||||||||   ||| |||||| ||||||||||| |||| ||||  |||||||||  ||| |  |||| | ||||| ||||||| ||| ||||| ||    
T  30385242 aaaaattataaaattttgatattttgaaaatatttgtcgagagaaattaaacatcttacatactaacatttgtatttatatattagttaaaaaatatggt 30385341  T
Q  445 ccaagtagattatgtgaataatgca 469  Q
    | ||||| | |||||||||| ||||    
T  30385342 caaagtaaactatgtgaatagtgca 30385366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 1e-18; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 333 - 481
Target Start/End: Complemental strand, 10599756 - 10599608
Alignment:
Q  333 ttatttattagcaaaaattataaatagttggtattttaaaaatatttgttgagataaatcgaacatcttatttacaactatttctctttatgtattagta 432  Q
    |||| |||||| | |||||||||| | ||| |||||| ||||||||| ||||||||||||||||||||||| ||| |  || | ||||||| ||||||      
T  10599756 ttatctattagtagaaattataaaaaattgatattttgaaaatatttattgagataaatcgaacatcttatatactaacatctatctttatttattagcc 10599657  T
Q  433 aaacaatatagtccaagtagattatgtgaataatgcatatgatcaaact 481  Q
     || |||||  || ||  |||||||||||||| ||||||||||||||||    
T  10599656 taaaaatatgatcgaaaaagattatgtgaatattgcatatgatcaaact 10599608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 397
Target Start/End: Original strand, 26567189 - 26567290
Alignment:
Q  295 atatgtcaatgcacaactttgattattgatatgtttagttatttattagcaaaaattataaatagttggtattttaaaaatatttgttgagataaatcga 394  Q
    ||||||||||  ||||||||| | |||||||| |||| |||| |||    |||||||||||  ||| | |||||||||||||||||||||||||||| ||    
T  26567189 atatgtcaatatacaactttg-tcattgatatctttaattatctatattaaaaaattataacaagtagatattttaaaaatatttgttgagataaattga 26567287  T
Q  395 aca 397  Q
    |||    
T  26567288 aca 26567290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 401
Target Start/End: Complemental strand, 31869952 - 31869848
Alignment:
Q  297 atgtcaatgcacaactttgattattgatatgtttagttatttattagcaaaaattataaatagttggtattttaaaaatatttgttgagataaatcgaac 396  Q
    |||||||| ||||| ||||| |||| |||| |||| |||| ||| |  |||||||||||| | ||| |||||| ||||||||  |||||| ||||| |||    
T  31869952 atgtcaatacacaattttgactattaatatctttaattatatataataaaaaattataaaaatttgatattttgaaaatattcattgagacaaatcaaac 31869853  T
Q  397 atctt 401  Q
    |||||    
T  31869852 atctt 31869848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 402
Target Start/End: Original strand, 3623807 - 3623864
Alignment:
Q  345 aaaaattataaatagttggtattttaaaaatatttgttgagataaatcgaacatctta 402  Q
    |||||||||||| | ||| |||||||||||||||  |||||| ||||| |||||||||    
T  3623807 aaaaattataaaaatttgatattttaaaaatattcattgagacaaatcaaacatctta 3623864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 378
Target Start/End: Original strand, 7831351 - 7831432
Alignment:
Q  297 atgtcaatgcacaactttgattattgatatgtttagttatttattagcaaaaattataaatagttggtattttaaaaatatt 378  Q
    ||||||||||||||||| || ||||  ||| ||||||||| | | |  ||||| |||||| ||||| |||||||||||||||    
T  7831351 atgtcaatgcacaacttagaatattactatctttagttatctgtaataaaaaagtataaaaagttgatattttaaaaatatt 7831432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 392
Target Start/End: Complemental strand, 33821487 - 33821418
Alignment:
Q  323 atatgtttagttatttattagcaaaaattataaatagttggtattttaaaaatatttgttgagataaatc 392  Q
    |||| |||| |||| ||||  ||||||||||||| | ||| |||||||||||||||| || |||||||||    
T  33821487 atatttttaattatgtattgacaaaaattataaaaatttgatattttaaaaatatttattaagataaatc 33821418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 342
Target Start/End: Complemental strand, 54744003 - 54743908
Alignment:
Q  247 aatactacttcatctgtcctaaaataattgtcacggtttaacctttacatatgtcaatgcacaactttgattattgatatgtttagttatttatta 342  Q
    |||| |||||||| ||||  ||||||| |||||| ||||||| || | ||||| |||||||||||||||| |||| |||| ||||||||| |||||    
T  54744003 aatattacttcatttgtctcaaaataaatgtcaccgtttaactttcatatatgacaatgcacaactttgactatttatatctttagttatctatta 54743908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 457
Target Start/End: Original strand, 19901640 - 19901736
Alignment:
Q  364 tattttaaaaatatttgttgagataaatcgaacatcttatttac---aactatttctctttatgtattagtaaaacaatatagtccaagtagattat 457  Q
    |||||||||||||||  |||| ||||||||||||| |||| |||    | ||||| ||||||| |||||||||||||||||  || |||||||||||    
T  19901640 tattttaaaaatattcattgatataaatcgaacattttatatactaataatatttgtctttatatattagtaaaacaatattatcaaagtagattat 19901736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 297 - 378
Target Start/End: Original strand, 21370221 - 21370301
Alignment:
Q  297 atgtcaatgcacaactttgattattgatatgtttagttatttattagcaaaaattataaatagttggtattttaaaaatatt 378  Q
    ||||||||||||||||||||  | | |||| ||||||||| ||| | ||||||||||||| ||||| |||||| ||||||||    
T  21370221 atgtcaatgcacaactttgacaactaatatctttagttatctatcaccaaaaattataaa-agttgatattttgaaaatatt 21370301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 42225379 - 42225329
Alignment:
Q  328 tttagttatttattagcaaaaattataaatagttggtattttaaaaatatt 378  Q
    |||| |||| ||||||||||||||||||| | || ||||||||||||||||    
T  42225379 tttaattatatattagcaaaaattataaaaatttagtattttaaaaatatt 42225329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 401
Target Start/End: Complemental strand, 42049903 - 42049867
Alignment:
Q  365 attttaaaaatatttgttgagataaatcgaacatctt 401  Q
    |||||||||||| || |||||||||||||||||||||    
T  42049903 attttaaaaatacttattgagataaatcgaacatctt 42049867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 292 - 402
Target Start/End: Complemental strand, 10550644 - 10550534
Alignment:
Q  292 tacatatgtcaatgcacaactttgattattgatatgtttagttatttattagcaaaaattataaatagttggtattttaaaaatatttgttgagataaat 391  Q
    |||||||||||||  ||||||||||| ||| |||| |||| |||| ||| |  |||||||||||| | ||| |||||||||||||||  | |||| ||||    
T  10550644 tacatatgtcaatatacaactttgatcattaatatatttaattatatataataaaaaattataaaaatttgatattttaaaaatattcatcgagacaaat 10550545  T
Q  392 cgaacatctta 402  Q
    | |||||||||    
T  10550544 caaacatctta 10550534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 397
Target Start/End: Original strand, 11794624 - 11794675
Alignment:
Q  346 aaaattataaatagttggtattttaaaaatatttgttgagataaatcgaaca 397  Q
    ||||||||||| | ||| |||||||||||||||| |||||| ||||||||||    
T  11794624 aaaattataaaaatttgatattttaaaaatatttattgagacaaatcgaaca 11794675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 392
Target Start/End: Original strand, 29585939 - 29585986
Alignment:
Q  345 aaaaattataaatagttggtattttaaaaatatttgttgagataaatc 392  Q
    |||||||||||| | ||| |||||||||||||||| ||||||||||||    
T  29585939 aaaaattataaaaatttgatattttaaaaatatttattgagataaatc 29585986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 320 - 378
Target Start/End: Complemental strand, 42155009 - 42154951
Alignment:
Q  320 ttgatatgtttagttatttattagcaaaaattataaatagttggtattttaaaaatatt 378  Q
    ||||||| |||| |||  ||| ||||||||||||||| ||||| |||||||||||||||    
T  42155009 ttgatatatttaattacatataagcaaaaattataaaaagttgatattttaaaaatatt 42154951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 345 - 397
Target Start/End: Complemental strand, 50205911 - 50205859
Alignment:
Q  345 aaaaattataaatagttggtattttaaaaatatttgttgagataaatcgaaca 397  Q
    |||||||||||| | ||  |||||||||||||||||| |||||||||| ||||    
T  50205911 aaaaattataaaaatttaatattttaaaaatatttgtcgagataaatcaaaca 50205859  T

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Target: chr2 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 300 - 397
Target Start/End: Original strand, 13533036 - 13533133
Alignment:
Q  300 tcaatgcacaactttgattattgatatgtttagttatttattagcaaaaattataaatagttggtattttaaaaatatttgttgagataaatcgaaca 397  Q
    |||||| |||| ||| | |||| ||||  ||||||||||||||  |||| || |||| | ||| ||||||||||||||| |||||||||||| |||||    
T  13533036 tcaatgtacaattttaactattaatattcttagttatttattaataaaagttgtaaaaaattgatattttaaaaatattcgttgagataaattgaaca 13533133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 402
Target Start/End: Original strand, 2183002 - 2183111
Alignment:
Q  293 acatatgtcaatgcacaactttgattattgatatgtttagttatttattagcaaaaattataaatagttggtattttaaaaatatttgttgagataaatc 392  Q
    ||||||| |||||||||| ||||| | || |||| |||| |||| ||  |  |||||||||||| | ||  |||||| ||||||||||| |||| |||||    
T  2183002 acatatgccaatgcacaattttgactgttaatatctttaattatctaaaataaaaaattataaaaatttaatattttgaaaatatttgtcgagacaaatc 2183101  T
Q  393 gaacatctta 402  Q
     |||||||||    
T  2183102 aaacatctta 2183111  T

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Target: chr5 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 33568151 - 33568107
Alignment:
Q  33 gggtgagtgaatgtgattttgaaaagggttaaaattgatattttt 77  Q
    |||||||||  |||||||||||||| |||||||||||||||||||    
T  33568151 gggtgagtgggtgtgattttgaaaaaggttaaaattgatattttt 33568107  T

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Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 401
Target Start/End: Original strand, 3050867 - 3050933
Alignment:
Q  335 atttattagcaaaaattataaatagttggtattttaaaaatatttgttgagataaatcgaacatctt 401  Q
    ||||||||| ||||||||| || | ||| ||||| ||||||||| ||||||||||||| ||| ||||    
T  3050867 atttattagaaaaaattatgaaaatttgatatttgaaaaatattcgttgagataaatctaacttctt 3050933  T

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Target: chr7 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 378
Target Start/End: Complemental strand, 33010408 - 33010331
Alignment:
Q  301 caatgcacaactttgattattgatatgtttagttatttattagcaaaaattataaatagttggtattttaaaaatatt 378  Q
    |||||||||| |||||   || |||| |||| |||| |||||| |||||||||||| ||||| |||||| ||||||||    
T  33010408 caatgcacaaatttgacctttaatatctttaattatctattagtaaaaattataaaaagttgatattttgaaaatatt 33010331  T

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Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 398
Target Start/End: Complemental strand, 43213743 - 43213678
Alignment:
Q  333 ttatttattagcaaaaattataaatagttggtattttaaaaatatttgttgagataaatcgaacat 398  Q
    |||| |||||| |||||| ||||| | ||| |||||||||||||||  || |||||||||||||||    
T  43213743 ttatctattaggaaaaataataaaaaattgatattttaaaaatattcattaagataaatcgaacat 43213678  T

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