View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5970_high_19 (Length: 379)
Name: NF5970_high_19
Description: NF5970
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5970_high_19 |
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Alignment Details
Target: chr7 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 13 - 363
Target Start/End: Complemental strand, 44644783 - 44644433
Alignment:
| Q |
13 |
aatatctgtcatgtttttaattagggctgattaaataaattatccttatgaatcttcagaaatttattaaattgcaaagatcttattattctccaataga |
112 |
Q |
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| T |
44644783 |
aatatctgtcatgtttttaattagggctgattaaataatttatccttgtgaatcttcagaaatttattaaatcgcaaagatcttattattctccaataga |
44644684 |
T |
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| Q |
113 |
gtttttgtgtgacaaggggatctannnnnnnnnnatggcaaatgacatctaannnnnnnn--acagggctaaatcaaaattcgtacaaatgactagaaga |
210 |
Q |
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||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
44644683 |
atttttgtgtgacaaggggatctatttttttt--atggcaaatgacatctaattttttttttacagggctaaatcaaaattcgtacaaatgactagaaga |
44644586 |
T |
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| Q |
211 |
aatattatttaaccttaatttcaaaaacatctcacacaacctactaagatattatcttacattattttcaatgctttacatcattcattcatgacatttt |
310 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44644585 |
aatattgtttaaccttaatttcaaaaacatctcacacaacctactaagatattatcttacattattttcaatgctttacatcattcattcatgacatttt |
44644486 |
T |
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| Q |
311 |
cactcaaaacatgctaagatcatccaaagtcatatattcctatgccaataact |
363 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44644485 |
cactcaaaacatgctaagatcatccaaagtcatatattcctatgccaataact |
44644433 |
T |
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