View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5970_high_3 (Length: 767)

Name: NF5970_high_3
Description: NF5970
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5970_high_3
NF5970_high_3
[»] chr1 (47 HSPs)
chr1 (18-761)||(45935324-45936068)
chr1 (670-717)||(25715343-25715390)
chr1 (670-720)||(28090711-28090761)
chr1 (670-720)||(37462893-37462943)
chr1 (670-720)||(41560444-41560494)
chr1 (669-720)||(10200322-10200373)
chr1 (642-720)||(30202118-30202197)
chr1 (669-720)||(39140730-39140781)
chr1 (670-720)||(4590549-4590599)
chr1 (670-720)||(5338928-5338978)
chr1 (670-720)||(8796424-8796474)
chr1 (670-720)||(21769728-21769778)
chr1 (670-720)||(26113456-26113506)
chr1 (670-720)||(32404543-32404593)
chr1 (670-720)||(34444571-34444621)
chr1 (670-720)||(44751699-44751749)
chr1 (670-720)||(44941793-44941843)
chr1 (670-720)||(52561606-52561656)
chr1 (670-715)||(26299288-26299333)
chr1 (671-720)||(28511819-28511868)
chr1 (670-718)||(7124358-7124406)
chr1 (645-716)||(31274392-31274464)
chr1 (673-720)||(2429649-2429696)
chr1 (673-716)||(9599414-9599457)
chr1 (670-709)||(15784982-15785021)
chr1 (673-720)||(17269009-17269056)
chr1 (673-720)||(27704165-27704212)
chr1 (673-720)||(36339824-36339871)
chr1 (673-720)||(37294128-37294175)
chr1 (670-709)||(43481815-43481854)
chr1 (673-720)||(52532636-52532683)
chr1 (670-720)||(1210960-1211010)
chr1 (670-720)||(2914140-2914190)
chr1 (670-720)||(19908052-19908102)
chr1 (670-720)||(22175360-22175410)
chr1 (670-720)||(25979248-25979298)
chr1 (670-720)||(27847817-27847867)
chr1 (670-720)||(29577467-29577517)
chr1 (670-720)||(38807688-38807738)
chr1 (670-720)||(38877360-38877410)
chr1 (670-720)||(43240396-43240446)
chr1 (670-720)||(49347410-49347460)
chr1 (670-720)||(50257785-50257835)
chr1 (675-720)||(2544808-2544853)
chr1 (646-706)||(4029351-4029412)
chr1 (671-720)||(11941598-11941647)
chr1 (670-715)||(40568427-40568472)
[»] chr3 (33 HSPs)
chr3 (151-544)||(15817624-15818016)
chr3 (33-109)||(15818012-15818088)
chr3 (670-720)||(24778626-24778676)
chr3 (644-720)||(45374467-45374544)
chr3 (670-718)||(40672384-40672432)
chr3 (670-720)||(15296122-15296172)
chr3 (670-720)||(24541349-24541399)
chr3 (670-720)||(40116355-40116405)
chr3 (670-720)||(40991646-40991696)
chr3 (670-720)||(41529976-41530026)
chr3 (674-720)||(46148243-46148289)
chr3 (670-720)||(48508450-48508500)
chr3 (670-720)||(48734164-48734214)
chr3 (670-720)||(52927865-52927915)
chr3 (644-720)||(12096695-12096772)
chr3 (671-720)||(29601107-29601156)
chr3 (249-318)||(43953280-43953349)
chr3 (670-718)||(19676098-19676146)
chr3 (670-714)||(38060935-38060979)
chr3 (673-720)||(42510036-42510083)
chr3 (670-717)||(49503585-49503632)
chr3 (670-720)||(5169047-5169097)
chr3 (670-720)||(19737199-19737248)
chr3 (670-720)||(19758102-19758151)
chr3 (670-720)||(31566178-31566228)
chr3 (670-720)||(37083309-37083359)
chr3 (670-720)||(45486866-45486916)
chr3 (670-720)||(54128594-54128644)
chr3 (644-720)||(7895870-7895947)
chr3 (675-720)||(23534592-23534637)
chr3 (670-715)||(31146919-31146964)
chr3 (671-720)||(39208823-39208872)
chr3 (644-720)||(53262356-53262433)
[»] chr4 (43 HSPs)
chr4 (38-239)||(5164246-5164446)
chr4 (645-720)||(15661863-15661939)
chr4 (118-239)||(5191687-5191807)
chr4 (670-720)||(26024867-26024917)
chr4 (670-720)||(35690486-35690536)
chr4 (644-720)||(4441068-4441145)
chr4 (673-720)||(28467653-28467700)
chr4 (644-714)||(30634096-30634167)
chr4 (670-709)||(47265212-47265251)
chr4 (670-720)||(48174110-48174160)
chr4 (675-720)||(51176789-51176834)
chr4 (670-718)||(55007963-55008011)
chr4 (670-706)||(56375519-56375555)
chr4 (670-705)||(1380600-1380635)
chr4 (670-709)||(4879126-4879165)
chr4 (670-709)||(7947163-7947202)
chr4 (670-709)||(15665327-15665366)
chr4 (670-717)||(28236400-28236447)
chr4 (673-720)||(29399019-29399066)
chr4 (673-720)||(36255542-36255589)
chr4 (670-717)||(45209222-45209269)
chr4 (670-709)||(50862857-50862896)
chr4 (670-709)||(50967045-50967084)
chr4 (61-138)||(5186136-5186214)
chr4 (670-720)||(21359242-21359292)
chr4 (645-706)||(21528517-21528579)
chr4 (670-720)||(23906314-23906364)
chr4 (670-720)||(25575039-25575089)
chr4 (670-720)||(26037522-26037572)
chr4 (670-720)||(27450197-27450247)
chr4 (670-720)||(31959831-31959881)
chr4 (670-720)||(39100553-39100603)
chr4 (670-720)||(49939751-49939801)
chr4 (670-720)||(51421945-51421995)
chr4 (670-720)||(51438660-51438710)
chr4 (670-720)||(52569532-52569582)
chr4 (670-707)||(7544548-7544585)
chr4 (671-720)||(13805283-13805332)
chr4 (670-715)||(19969401-19969446)
chr4 (671-720)||(28486136-28486185)
chr4 (646-718)||(37488308-37488381)
chr4 (670-715)||(50238632-50238677)
chr4 (670-715)||(50238718-50238763)
[»] chr7 (34 HSPs)
chr7 (670-722)||(9210721-9210773)
chr7 (670-720)||(28708596-28708646)
chr7 (673-720)||(24376043-24376090)
chr7 (670-720)||(1011261-1011311)
chr7 (670-720)||(2885739-2885789)
chr7 (647-720)||(6375083-6375157)
chr7 (670-720)||(28627950-28628000)
chr7 (670-720)||(40979945-40979995)
chr7 (670-716)||(42187660-42187706)
chr7 (670-720)||(45601691-45601741)
chr7 (670-720)||(47852302-47852352)
chr7 (645-720)||(28208319-28208395)
chr7 (643-706)||(29650613-29650677)
chr7 (670-717)||(6263477-6263524)
chr7 (670-709)||(7273326-7273365)
chr7 (646-720)||(12841267-12841342)
chr7 (677-720)||(25891103-25891146)
chr7 (670-709)||(27649006-27649045)
chr7 (670-720)||(4604762-4604812)
chr7 (670-720)||(11594175-11594225)
chr7 (670-720)||(14057693-14057743)
chr7 (670-720)||(14367721-14367771)
chr7 (670-720)||(21078132-21078182)
chr7 (670-720)||(31682619-31682669)
chr7 (670-720)||(35906218-35906268)
chr7 (670-720)||(36101794-36101844)
chr7 (670-720)||(36652207-36652257)
chr7 (670-720)||(37618160-37618210)
chr7 (670-720)||(39906389-39906439)
chr7 (670-708)||(42969925-42969963)
chr7 (670-720)||(44855191-44855241)
chr7 (670-720)||(45836499-45836549)
chr7 (670-720)||(47652762-47652812)
chr7 (646-706)||(31005434-31005495)
[»] chr8 (20 HSPs)
chr8 (670-720)||(490550-490600)
chr8 (670-720)||(1928604-1928654)
chr8 (670-720)||(45419450-45419500)
chr8 (670-718)||(45041333-45041381)
chr8 (669-720)||(30689950-30690001)
chr8 (670-720)||(35914618-35914668)
chr8 (669-720)||(1313779-1313830)
chr8 (669-720)||(29520864-29520915)
chr8 (673-720)||(32931175-32931222)
chr8 (670-720)||(11523740-11523790)
chr8 (670-720)||(12491155-12491205)
chr8 (670-720)||(14742099-14742149)
chr8 (670-720)||(16035744-16035794)
chr8 (670-720)||(18741847-18741897)
chr8 (670-720)||(18746811-18746861)
chr8 (674-720)||(27556323-27556369)
chr8 (670-720)||(32276900-32276950)
chr8 (670-720)||(36565258-36565308)
chr8 (645-706)||(44047523-44047585)
chr8 (674-719)||(14903777-14903822)
[»] chr6 (17 HSPs)
chr6 (670-720)||(34522-34572)
chr6 (670-720)||(30031471-30031521)
chr6 (670-720)||(12890790-12890840)
chr6 (670-709)||(5897683-5897722)
chr6 (673-720)||(8364771-8364818)
chr6 (456-499)||(10813318-10813361)
chr6 (669-720)||(31819046-31819097)
chr6 (644-717)||(579636-579710)
chr6 (670-720)||(655411-655461)
chr6 (670-720)||(3206476-3206526)
chr6 (670-720)||(5096049-5096099)
chr6 (670-720)||(18130831-18130881)
chr6 (670-720)||(23888495-23888545)
chr6 (670-720)||(28085591-28085641)
chr6 (678-720)||(30642984-30643026)
chr6 (670-720)||(32068635-32068685)
chr6 (648-720)||(5258142-5258215)
[»] chr5 (28 HSPs)
chr5 (670-720)||(27386555-27386605)
chr5 (663-720)||(32442135-32442192)
chr5 (670-722)||(41894286-41894338)
chr5 (670-720)||(14667986-14668036)
chr5 (670-720)||(20456988-20457038)
chr5 (670-720)||(29922499-29922549)
chr5 (670-720)||(38132551-38132601)
chr5 (670-720)||(42272692-42272742)
chr5 (671-720)||(418052-418101)
chr5 (673-720)||(7359281-7359328)
chr5 (670-717)||(38105280-38105327)
chr5 (676-719)||(41108752-41108795)
chr5 (670-720)||(1275479-1275529)
chr5 (670-720)||(2915513-2915563)
chr5 (670-708)||(5558368-5558406)
chr5 (670-720)||(7678692-7678742)
chr5 (670-720)||(9235262-9235311)
chr5 (670-720)||(13561403-13561453)
chr5 (644-709)||(14665938-14666004)
chr5 (670-708)||(18855834-18855872)
chr5 (670-720)||(29816597-29816647)
chr5 (670-720)||(30213790-30213840)
chr5 (670-720)||(30639733-30639783)
chr5 (670-720)||(38685182-38685232)
chr5 (670-716)||(39322096-39322142)
chr5 (670-720)||(42576225-42576275)
chr5 (670-715)||(408511-408556)
chr5 (671-720)||(11069180-11069229)
[»] chr2 (28 HSPs)
chr2 (670-720)||(9531617-9531667)
chr2 (669-720)||(887081-887132)
chr2 (673-720)||(3720435-3720482)
chr2 (670-717)||(10516766-10516813)
chr2 (670-720)||(11412925-11412975)
chr2 (670-720)||(12520079-12520129)
chr2 (670-720)||(12882062-12882112)
chr2 (670-720)||(18959126-18959176)
chr2 (670-720)||(25384684-25384734)
chr2 (670-720)||(33504439-33504489)
chr2 (670-716)||(43573147-43573193)
chr2 (671-720)||(39709219-39709268)
chr2 (670-722)||(440929-440981)
chr2 (645-720)||(3635314-3635390)
chr2 (645-720)||(12734915-12734991)
chr2 (677-720)||(3481369-3481412)
chr2 (673-720)||(9496081-9496128)
chr2 (669-720)||(45543089-45543140)
chr2 (670-720)||(227404-227454)
chr2 (670-720)||(4807810-4807860)
chr2 (670-720)||(11992125-11992175)
chr2 (670-720)||(12474944-12474994)
chr2 (670-720)||(17670683-17670733)
chr2 (670-720)||(28508893-28508943)
chr2 (670-720)||(30306247-30306297)
chr2 (670-720)||(38435167-38435217)
chr2 (670-707)||(16521024-16521061)
chr2 (679-720)||(32364947-32364988)
[»] scaffold1318 (1 HSPs)
scaffold1318 (670-720)||(546-596)
[»] scaffold0491 (1 HSPs)
scaffold0491 (670-720)||(3652-3702)
[»] scaffold0392 (1 HSPs)
scaffold0392 (670-720)||(6789-6839)
[»] scaffold0168 (1 HSPs)
scaffold0168 (670-720)||(28906-28956)
[»] scaffold0050 (1 HSPs)
scaffold0050 (670-720)||(58243-58293)
[»] scaffold0199 (1 HSPs)
scaffold0199 (648-720)||(14798-14871)


Alignment Details
Target: chr1 (Bit Score: 697; Significance: 0; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 697; E-Value: 0
Query Start/End: Original strand, 18 - 761
Target Start/End: Complemental strand, 45936068 - 45935324
Alignment:
Q  18 aaatttacactatcaaaaattcacaatcaatcatatgtacgagtttagaagtagttatcgttaaagttacatgcttttaatgatataaaaattacgagtg 117  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  45936068 aaatttacactatcaacaattcacaatcaatcatatgtacgagtttagaagtagttatcgttaaagttaaatggttttaatgatataaaaattacgagtg 45935969  T
Q  118 aaaaaatctttacattgacggcgcatataaattaaaatcatataggaaatgcaagatgttacctgaaaaatataataaaacatcattcagttttattagt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45935968 aaaaaatctttacattgacggcgcatataaattaaaatcatataggaaatgcaagatgttacctgaaaaatataataaaacatcattcagttttattagt 45935869  T
Q  218 gtctttctttccagcaagaatccttgaaatctgaagtcctctactacatgcttgattgaatagcaaccgggtttggaactccgacacaaatgggaaccat 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45935868 gtctttctttccagcaagaatccttgaaatctgaagtcctctactacatgcttgattgaatagcaaccgggtttggaactccgacacaaatgggaaccat 45935769  T
Q  318 gataaaactgctgctggcatgaaaattatcaaccccattacatattcatatgctcttgaaagttctctcactgaagcccatagtttagcccacttcaaga 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45935768 gataaaactgctgctggcatgaaaattatcaaccccattacatattcatatgctcttgaaagttctctcactgaagcccatagtttagcccacttcaaga 45935669  T
Q  418 gtcccctgcatgtttgtgcaatcttgattgcaaaagagaaagaa-aaaatgttataatttcagggattaaaatcatatttaaaccacagcttcttttgca 516  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  45935668 gtcccctgcatgtttgtgcaatcttgattgcaaaagagaaagaaaaaaatgttataatttcaggaattaaaatcatatttaaaccacaacttcttttgca 45935569  T
Q  517 gagaccaaaacaaaatgaagcatatttaaagacttaaaaatatatctaagcctctataaaatcttcttcaatcttcctaatacatatcatacaatagcaa 616  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45935568 gagaccaaaacaaaatgaagcatatttaaagacttaaaaatatatctaagcctctataaaatcttcttcaatcttcctaatacatatcatacaatagcaa 45935469  T
Q  617 aatgagcaaaaattgttgttggctatgtacaacaacaacgacgacgaccaagattatcccactaagtgaggtccgctacatggatcaaattactccataa 716  Q
    |||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  45935468 aatgagaaaaaattgttgttggctatgtacaacaacaacaacaacgaccaagattatcccactaagtgaggtccgttacatggatcaaattactccataa 45935369  T
Q  717 tgttgttagctatatgatgcaggaattttagcttcccagaataat 761  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  45935368 tgttgttagctatatgatgcaggaattttagcttaccagaataat 45935324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 670 - 717
Target Start/End: Original strand, 25715343 - 25715390
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataat 717  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  25715343 ttatcccactaagtgaggtcggctacatggatcaaattacgccataat 25715390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 28090711 - 28090761
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  28090711 ttatcccactaagtggggtcggctacatggatcaaattacgccataatgtt 28090761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 37462893 - 37462943
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  37462893 ttatcccactaagtggggtcggctacatggatcaaattacgccataatgtt 37462943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 41560494 - 41560444
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  41560494 ttatcccactaagtggggtcggctacatggatcaaattacgccataatgtt 41560444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 669 - 720
Target Start/End: Original strand, 10200322 - 10200373
Alignment:
Q  669 attatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||| ||||||||||| ||||||||||||||||||| |||| |||||    
T  10200322 attatcccattaagtgaggtcggctacatggatcaaattacaccatgatgtt 10200373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 642 - 720
Target Start/End: Original strand, 30202118 - 30202197
Alignment:
Q  642 tgtacaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||||| || || ||||||  ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  30202118 tgtacaacaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 30202197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 669 - 720
Target Start/End: Complemental strand, 39140781 - 39140730
Alignment:
Q  669 attatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||||||| |||| |||||||| |||||||||| ||||||||||    
T  39140781 attatcccactaagtggggtcggctacatgaatcaaattacgccataatgtt 39140730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 4590549 - 4590599
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  4590549 ttatcccactaagtggggtcggctacatggatcaaattacaccatattgtt 4590599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 5338978 - 5338928
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||| |||||||||||||  ||||||||||||||||||| ||||||||||    
T  5338978 ttatctcactaagtgaggttggctacatggatcaaattacgccataatgtt 5338928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 8796474 - 8796424
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||||||| ||||||| ||||||||||    
T  8796474 ttatcccactaagtggggtcggctacatggattaaattacgccataatgtt 8796424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 21769728 - 21769778
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||| ||||||||| |||| ||||||||||||||||||| ||||||||||    
T  21769728 ttatcacactaagtggggtcggctacatggatcaaattacgccataatgtt 21769778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 26113456 - 26113506
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||||| || ||||||||||||||||||  ||||||||||    
T  26113456 ttatcccactaagtgagctcggctacatggatcaaattaagccataatgtt 26113506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 32404543 - 32404593
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||||||||||||||| |||| |||||    
T  32404543 ttatcccactaagtggggtcggctacatggatcaaattacgccattatgtt 32404593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 34444621 - 34444571
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||| ||||||||||| ||||||||||    
T  34444621 ttatcccactaagtggggtcggctacatagatcaaattacaccataatgtt 34444571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 44751749 - 44751699
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||||||||||| |||||||||||||||| || ||||| ||||    
T  44751749 ttatcccactaagtgaggtcggctacatggatcaaatgacgccatagtgtt 44751699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 44941793 - 44941843
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  44941793 ttatcccactaagtggggtcggctacatggatcaaattacgccatagtgtt 44941843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 52561606 - 52561656
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||||||||||||| | ||||||||||    
T  52561606 ttatcccactaagtggggtcggctacatggatcaaatttcgccataatgtt 52561656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 670 - 715
Target Start/End: Complemental strand, 26299333 - 26299288
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccata 715  Q
    ||||||||||||||| |||| ||||||||||||||||||| |||||    
T  26299333 ttatcccactaagtggggtcggctacatggatcaaattacgccata 26299288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 671 - 720
Target Start/End: Original strand, 28511819 - 28511868
Alignment:
Q  671 tatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||||| |||| ||||||| ||||||||||| ||||||||||    
T  28511819 tatcccactaagtggggtcggctacattgatcaaattacgccataatgtt 28511868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 670 - 718
Target Start/End: Complemental strand, 7124406 - 7124358
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatg 718  Q
    |||||||||||||||||||| |||||||||||||||  || ||||||||    
T  7124406 ttatcccactaagtgaggtcagctacatggatcaaacgacaccataatg 7124358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 645 - 716
Target Start/End: Original strand, 31274392 - 31274464
Alignment:
Q  645 acaacaacaacgacgacgaccaag-attatcccactaagtgaggtccgctacatggatcaaattactccataa 716  Q
    ||||||||||| || || |||||| |||||||||||||||| |||| ||||||  ||||||||||| ||||||    
T  31274392 acaacaacaacaacaacaaccaagcattatcccactaagtggggtcagctacacagatcaaattacgccataa 31274464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 673 - 720
Target Start/End: Original strand, 2429649 - 2429696
Alignment:
Q  673 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||| |||| ||||| ||||||||||||| ||||||||||    
T  2429649 tcccactaagtggggtcggctacgtggatcaaattacgccataatgtt 2429696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 673 - 716
Target Start/End: Original strand, 9599414 - 9599457
Alignment:
Q  673 tcccactaagtgaggtccgctacatggatcaaattactccataa 716  Q
    ||||||||||| ||||| ||||||||||||||||||| ||||||    
T  9599414 tcccactaagtaaggtcagctacatggatcaaattacgccataa 9599457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 670 - 709
Target Start/End: Original strand, 15784982 - 15785021
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattac 709  Q
    |||||||||||| ||||||| |||||||||||||||||||    
T  15784982 ttatcccactaaatgaggtcggctacatggatcaaattac 15785021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 673 - 720
Target Start/End: Original strand, 17269009 - 17269056
Alignment:
Q  673 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||| || |||| ||||||||||||||||||| ||||||||||    
T  17269009 tcccactaaatggggtcggctacatggatcaaattacgccataatgtt 17269056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 673 - 720
Target Start/End: Complemental strand, 27704212 - 27704165
Alignment:
Q  673 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||| | |||| ||||||||||||||||||| ||||||||||    
T  27704212 tcccactaagcggggtcggctacatggatcaaattacgccataatgtt 27704165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 673 - 720
Target Start/End: Original strand, 36339824 - 36339871
Alignment:
Q  673 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||  ||| |||||||||||||||||||| |||||||||    
T  36339824 tcccactaagtggagtcagctacatggatcaaattacttcataatgtt 36339871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 673 - 720
Target Start/End: Original strand, 37294128 - 37294175
Alignment:
Q  673 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||| || |||| ||||||||||||||||||| ||||||||||    
T  37294128 tcccactaaatggggtcagctacatggatcaaattacgccataatgtt 37294175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 670 - 709
Target Start/End: Original strand, 43481815 - 43481854
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattac 709  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  43481815 ttatcccactaagtggggtcggctacatggatcaaattac 43481854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 673 - 720
Target Start/End: Original strand, 52532636 - 52532683
Alignment:
Q  673 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||| |||| |||||||| |||||||||| ||||||||||    
T  52532636 tcccactaagtggggtcggctacatgaatcaaattacgccataatgtt 52532683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 1211010 - 1210960
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  1211010 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 1210960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 2914140 - 2914190
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||  ||||||||||||||| ||| ||||||||||    
T  2914140 ttatcccactaagtggggttggctacatggatcaaagtacgccataatgtt 2914190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 19908052 - 19908102
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||||||| ||||||| | ||||||||    
T  19908052 ttatcccactaagtggggtcggctacatggataaaattacgcaataatgtt 19908102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 22175410 - 22175360
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||||   ||||||||||    
T  22175410 ttatcccactaagtggggtcggctacatggatcaaattctaccataatgtt 22175360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 25979248 - 25979298
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  25979248 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 25979298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 27847817 - 27847867
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||||| || ||||||||||| |||||||  |||||||||    
T  27847817 ttatcccactaagtgagatcggctacatggataaaattacggcataatgtt 27847867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 29577517 - 29577467
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  29577517 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 29577467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 38807688 - 38807738
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||| |||||||| ||||| ||||    
T  38807688 ttatcccactaagtggggtcggctacatggaacaaattacgccatagtgtt 38807738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 38877360 - 38877410
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| | || |||||||||||||||| || ||||||||||    
T  38877360 ttatcccactaagtgggttcggctacatggatcaaatgacgccataatgtt 38877410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 43240396 - 43240446
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||||||||||| |||||||| ||||||| || ||||| ||||    
T  43240396 ttatcccactaagtgaggtcggctacatgaatcaaatgacgccatagtgtt 43240446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 49347410 - 49347460
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  49347410 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 49347460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 50257835 - 50257785
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||| ||||||||| |||  ||||||||||||||||||| ||||||||||    
T  50257835 ttatctcactaagtggggttggctacatggatcaaattacaccataatgtt 50257785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 720
Target Start/End: Complemental strand, 2544853 - 2544808
Alignment:
Q  675 ccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||| |||| ||||||||||||||||||  ||||||||||    
T  2544853 ccactaagtggggtcggctacatggatcaaattatgccataatgtt 2544808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 646 - 706
Target Start/End: Complemental strand, 4029412 - 4029351
Alignment:
Q  646 caacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaat 706  Q
    |||||||||| || || ||||||  ||||||||||||||| |||| ||||||||||||||||    
T  4029412 caacaacaacaacaacaaccaagtcttatcccactaagtggggtcggctacatggatcaaat 4029351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 671 - 720
Target Start/End: Original strand, 11941598 - 11941647
Alignment:
Q  671 tatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||||| |  |||||||||||||| ||| ||||||||||    
T  11941598 tatcccactaagtgaggccgactacatggatcaaaatacgccataatgtt 11941647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 670 - 715
Target Start/End: Original strand, 40568427 - 40568472
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccata 715  Q
    ||||||||||||||| |||  ||||||||||||||||||| |||||    
T  40568427 ttatcccactaagtggggttggctacatggatcaaattacgccata 40568472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 314; Significance: 1e-177; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 151 - 544
Target Start/End: Complemental strand, 15818016 - 15817624
Alignment:
Q  151 aaaatcatataggaaatgcaagatgttacctgaaaaatataataaaacatcattcagttttattagtgtctttctttccagcaagaatccttgaaatctg 250  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||    
T  15818016 aaaatcatataggaaatgcaagatgttacctgaaaaatatgataaaacatcattcagttttgtaagtgtctttctttccagcaagaatcattgaaatctg 15817917  T
Q  251 aagtcctctactacatgcttgattgaatagcaaccgggtttggaactccgacacaaatgggaaccatgataaaactgctgctggcatgaaaattatcaac 350  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||     
T  15817916 aagtcctctactaaatgcttgattgaatagcaaccgcgtttggaactccgacacaaatgggaaccacgataaaactgctgttggcatgaaaattatcaat 15817817  T
Q  351 cccattacatattcatatgctcttgaaagttctctcactgaagcccatagtttagcccacttcaagagtcccctgcatgtttgtgcaatcttgattgcaa 450  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  15817816 cccattacatattcatatgctcttgaaagttctctcactgaagcccatagtttcgcccacttcaagagtcccctacatgtttgtgcaatcttgattgcaa 15817717  T
Q  451 aagagaaagaaaaaatgttataatttcagggattaaaatcatatttaaaccacagcttcttttgcagagaccaaaacaaaatgaagcatattta 544  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||  | ||| |||||||||||| ||||||||| ||||||||||||    
T  15817716 aagagaga-aaaaaatgttataatttcagggattaaaatcatatttaaaccgaaactttttttgcagagactaaaacaaaaagaagcatattta 15817624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 33 - 109
Target Start/End: Complemental strand, 15818088 - 15818012
Alignment:
Q  33 aaaattcacaatcaatcatatgtacgagtttagaagtagttatcgttaaagttacatgcttttaatgatataaaaat 109  Q
    |||||| |||||||||||||||||||||||||||||  |||||||||||||||| ||| ||||||||||||||||||    
T  15818088 aaaatttacaatcaatcatatgtacgagtttagaagacgttatcgttaaagttaaatggttttaatgatataaaaat 15818012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 24778626 - 24778676
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  24778626 ttatcccactaagtggggtcggctacatggatcaaattacaccataatgtt 24778676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 644 - 720
Target Start/End: Original strand, 45374467 - 45374544
Alignment:
Q  644 tacaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||| || || ||||||  ||||||||||||||| |||| ||||||||||| ||||||| ||||||||||    
T  45374467 tacaacaacaacaacaacaaccaagccttatcccactaagtggggtcagctacatggattaaattacgccataatgtt 45374544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 670 - 718
Target Start/End: Original strand, 40672384 - 40672432
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatg 718  Q
    |||||||||||||||||||| ||||||||||||||||||  ||||||||    
T  40672384 ttatcccactaagtgaggtcagctacatggatcaaattatgccataatg 40672432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 15296172 - 15296122
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| || |||||||||||||||| ||||||||||    
T  15296172 ttatcccactaagtggggtcggccacatggatcaaattacaccataatgtt 15296122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 24541349 - 24541399
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| | ||||||||||||||||| ||||||||||    
T  24541349 ttatcccactaagtggggtcgggtacatggatcaaattacgccataatgtt 24541399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 40116355 - 40116405
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||| |||||| ||||| ||||||||||||| ||||||||||    
T  40116355 ttatcccactaagcgaggtcggctacgtggatcaaattacgccataatgtt 40116405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 40991696 - 40991646
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||| ||||||||| |||| ||||||||||||||||||| ||||||||||    
T  40991696 ttatctcactaagtggggtcagctacatggatcaaattacaccataatgtt 40991646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 41530026 - 41529976
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  41530026 ttatcccactaagtggggtcggctacatggatcaaattacgccatagtgtt 41529976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 674 - 720
Target Start/End: Complemental strand, 46148289 - 46148243
Alignment:
Q  674 cccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  46148289 cccactaagtggggtcggctacatggatcaaattacgccataatgtt 46148243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 48508500 - 48508450
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  48508500 ttatcccactaagtggggtcggctacatggatcaaattacgccatagtgtt 48508450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 48734164 - 48734214
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||| |||| ||||||||||    
T  48734164 ttatcccactaagtggggtcagctacatggatcaacttacgccataatgtt 48734214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 52927865 - 52927915
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||||||||||||||  ||||||||||    
T  52927865 ttatcccactaagtggggtcggctacatggatcaaattatgccataatgtt 52927915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 644 - 720
Target Start/End: Original strand, 12096695 - 12096772
Alignment:
Q  644 tacaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||| || || ||||||  ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  12096695 tacaacaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 12096772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 671 - 720
Target Start/End: Complemental strand, 29601156 - 29601107
Alignment:
Q  671 tatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||||| |||| |||||||||||||||||||  |||||||||    
T  29601156 tatcccactaagtggggtcagctacatggatcaaattacatcataatgtt 29601107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 249 - 318
Target Start/End: Original strand, 43953280 - 43953349
Alignment:
Q  249 tgaagtcctctactacatgcttgattgaatagcaaccgggtttggaactccgacacaaatgggaaccatg 318  Q
    ||||||||||| ||  ||||||| |||||||||| || ||||||||| || || ||||||||||||||||    
T  43953280 tgaagtcctctgctgaatgcttggttgaatagcagcctggtttggaattctgaaacaaatgggaaccatg 43953349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 670 - 718
Target Start/End: Original strand, 19676098 - 19676146
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatg 718  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||||||    
T  19676098 ttatcccactaagtggggtcagctacatggatcaaatcacgccataatg 19676146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 670 - 714
Target Start/End: Complemental strand, 38060979 - 38060935
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccat 714  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||    
T  38060979 ttatcccactaagtggggtcggctacatggatcaaattacgccat 38060935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 673 - 720
Target Start/End: Original strand, 42510036 - 42510083
Alignment:
Q  673 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||| ||||||| |||| ||||||||||||||||||| ||||||||||    
T  42510036 tccctctaagtggggtcggctacatggatcaaattacgccataatgtt 42510083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 670 - 717
Target Start/End: Original strand, 49503585 - 49503632
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataat 717  Q
    ||||||||||||||  |||| ||||||||||||||||||| |||||||    
T  49503585 ttatcccactaagtagggtcggctacatggatcaaattacgccataat 49503632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 5169097 - 5169047
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  5169097 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 5169047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 19737248 - 19737199
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||||||||||||||  ||||||||||    
T  19737248 ttatcccactaagtggggtc-gctacatggatcaaattataccataatgtt 19737199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 19758151 - 19758102
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||||||||||||||  ||||||||||    
T  19758151 ttatcccactaagtggggtc-gctacatggatcaaattataccataatgtt 19758102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 31566178 - 31566228
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  31566178 ttatcccactaagtggggtcggctacatggatcaaatgacaccatagtgtt 31566228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 37083309 - 37083359
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||| ||| |||||||| ||||||||||    
T  37083309 ttatcccactaagtggggtcggctacaaggaccaaattacgccataatgtt 37083359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 45486866 - 45486916
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| || | ||||||||||||||||||  ||||||||||    
T  45486866 ttatcccactaagtggggccggctacatggatcaaattatgccataatgtt 45486916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 54128644 - 54128594
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| ||||  |||||||||||||||||  ||||||||||    
T  54128644 ttatcccactaagtggggtcgcctacatggatcaaattatgccataatgtt 54128594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 644 - 720
Target Start/End: Original strand, 7895870 - 7895947
Alignment:
Q  644 tacaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||| || || ||||||  |||||||| |||||| |||| |||||||||||||||| || ||||| ||||    
T  7895870 tacaacaacaacaacaacaaccaagccttatcccattaagtggggtcggctacatggatcaaatgacgccatagtgtt 7895947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 720
Target Start/End: Original strand, 23534592 - 23534637
Alignment:
Q  675 ccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||| ||||||||||  |||||||||||||||||| ||||||||||    
T  23534592 ccacaaagtgaggtcgactacatggatcaaattacgccataatgtt 23534637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 670 - 715
Target Start/End: Complemental strand, 31146964 - 31146919
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccata 715  Q
    |||||||||||||||  ||| ||||||||||||||||||| |||||    
T  31146964 ttatcccactaagtggagtcggctacatggatcaaattacaccata 31146919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 671 - 720
Target Start/End: Complemental strand, 39208872 - 39208823
Alignment:
Q  671 tatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||| || ||||| ||||||||||||||||||  |||||||||    
T  39208872 tatcccactaactggggtcctctacatggatcaaattacgtcataatgtt 39208823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 644 - 720
Target Start/End: Complemental strand, 53262433 - 53262356
Alignment:
Q  644 tacaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||| || || ||||||  ||||||||||||||| |||| ||||||| |||||||| || ||||| ||||    
T  53262433 tacaacaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatagatcaaatgacgccatagtgtt 53262356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 3e-25; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 38 - 239
Target Start/End: Complemental strand, 5164446 - 5164246
Alignment:
Q  38 tcacaatcaatcatatgtacgagtttagaagtagttatcgttaaagttacatgcttttaatgatataaaaattacgagtg-aaaaaatctttacattgac 136  Q
    ||||||| ||| |||||||| | |||||||||||||||| || |||||| ||| ||| |||||||| | |||| | |||| |||||||||||| |||| |    
T  5164446 tcacaattaattatatgtacaactttagaagtagttatcattgaagttaaatgatttcaatgatatgacaattgcaagtgtaaaaaatctttaaattggc 5164347  T
Q  137 ggcgcatataaattaaaatcatataggaaatgcaagatgttacctgaaaaatataataaaacatcattcagttttattagtgtctttctttccagcaaga 236  Q
     | |||||||||||||| | |||  |||| || || |||||||| ||||| ||| |||| | |||||| |||||| | ||||||||||||||| ||||||    
T  5164346 tgtgcatataaattaaactaata--ggaagtggaaaatgttaccggaaaattatgataacatatcatttagttttgtaagtgtctttctttccggcaaga 5164249  T
Q  237 atc 239  Q
    |||    
T  5164248 atc 5164246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 645 - 720
Target Start/End: Original strand, 15661863 - 15661939
Alignment:
Q  645 acaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||||| || |||||   ||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  15661863 acaacaacaacgacaacaaccaaaccttatcccactaagtggggtcggctacatggatcaaattacgccataatgtt 15661939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 5191807 - 5191687
Alignment:
Q  118 aaaaaatctttacattgacggcgcatataaattaaaatcatataggaaatgcaagatgttacctgaaaaatataataaaacatcattcagttttattagt 217  Q
    ||||| |||||| ||||| ||| ||||||||||||| || || |  || |||||||||||||| ||||||||| |||| | ||||||||||||| | |||    
T  5191807 aaaaagtctttaaattgatggcacatataaattaaactcgtaaa--aattgcaagatgttacccgaaaaatatgataacatatcattcagttttgtaagt 5191710  T
Q  218 gtc-tttctttccagcaagaatc 239  Q
    ||| ||| |||| ||||||||||    
T  5191709 gtcttttttttcaagcaagaatc 5191687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 26024867 - 26024917
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||||||||||| ||||||||||| ||||||| ||||||||||    
T  26024867 ttatcccactaagtgaggtcggctacatggataaaattacaccataatgtt 26024917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 35690536 - 35690486
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  35690536 ttatcccactaagtggggtcggctacatggatcaaattacgccataatgtt 35690486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 644 - 720
Target Start/End: Complemental strand, 4441145 - 4441068
Alignment:
Q  644 tacaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||| |||||||| |||  ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  4441145 tacaacaacaacaacgacgacgaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 4441068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 673 - 720
Target Start/End: Complemental strand, 28467700 - 28467653
Alignment:
Q  673 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||| | |||||||||||||||||||||||| ||||||||||    
T  28467700 tcccactaagcggggtccgctacatggatcaaattacgccataatgtt 28467653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 644 - 714
Target Start/End: Original strand, 30634096 - 30634167
Alignment:
Q  644 tacaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccat 714  Q
    |||||||||||| || || ||||||  ||||||||||||||| |||| ||||||||||||||||||| ||||    
T  30634096 tacaacaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccat 30634167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 670 - 709
Target Start/End: Original strand, 47265212 - 47265251
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattac 709  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  47265212 ttatcccactaagtgaggtcggctacatggatcaaattac 47265251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 48174110 - 48174160
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||||||||    
T  48174110 ttatcccactaagtggggtctgctacatggatcaaatgacgccataatgtt 48174160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 675 - 720
Target Start/End: Complemental strand, 51176834 - 51176789
Alignment:
Q  675 ccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||| |||||||||||||||||||||||  ||||||||||    
T  51176834 ccactaagtgtggtccgctacatggatcaaattatgccataatgtt 51176789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 670 - 718
Target Start/End: Complemental strand, 55008011 - 55007963
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatg 718  Q
    ||||||||||||||| |||| |||||||||||||||||||  |||||||    
T  55008011 ttatcccactaagtggggtcggctacatggatcaaattacgtcataatg 55007963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 670 - 706
Target Start/End: Complemental strand, 56375555 - 56375519
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaat 706  Q
    |||||||||||||||||||| ||||||||||||||||    
T  56375555 ttatcccactaagtgaggtcggctacatggatcaaat 56375519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 670 - 705
Target Start/End: Complemental strand, 1380635 - 1380600
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaa 705  Q
    |||||||||||||||||||| |||||||||||||||    
T  1380635 ttatcccactaagtgaggtcggctacatggatcaaa 1380600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 670 - 709
Target Start/End: Original strand, 4879126 - 4879165
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattac 709  Q
    |||||||| ||||||||||| |||||||||||||||||||    
T  4879126 ttatcccagtaagtgaggtcggctacatggatcaaattac 4879165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 670 - 709
Target Start/End: Complemental strand, 7947202 - 7947163
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattac 709  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  7947202 ttatcccactaagtggggtcggctacatggatcaaattac 7947163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 670 - 709
Target Start/End: Complemental strand, 15665366 - 15665327
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattac 709  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  15665366 ttatcccactaagtggggtcagctacatggatcaaattac 15665327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 670 - 717
Target Start/End: Complemental strand, 28236447 - 28236400
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataat 717  Q
    ||||||||||||||| |||| ||||||| ||||||||||| |||||||    
T  28236447 ttatcccactaagtggggtcggctacatagatcaaattacaccataat 28236400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 673 - 720
Target Start/End: Complemental strand, 29399066 - 29399019
Alignment:
Q  673 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||| |||| |||||||| |||||||||| ||||||||||    
T  29399066 tcccactaagtggggtcagctacatgaatcaaattacgccataatgtt 29399019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 673 - 720
Target Start/End: Original strand, 36255542 - 36255589
Alignment:
Q  673 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||| |||| || |||||||||||||||| ||||||||||    
T  36255542 tcccactaagtggggtcggccacatggatcaaattacaccataatgtt 36255589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 670 - 717
Target Start/End: Original strand, 45209222 - 45209269
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataat 717  Q
    ||||||||||||||| |||| ||||||||||||||| ||| |||||||    
T  45209222 ttatcccactaagtggggtcggctacatggatcaaactacgccataat 45209269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 670 - 709
Target Start/End: Complemental strand, 50862896 - 50862857
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattac 709  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  50862896 ttatcccactaagtggggtcggctacatggatcaaattac 50862857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 670 - 709
Target Start/End: Original strand, 50967045 - 50967084
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattac 709  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  50967045 ttattccactaagtgaggtcggctacatggatcaaattac 50967084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 138
Target Start/End: Complemental strand, 5186214 - 5186136
Alignment:
Q  61 tttagaagtagttatcgttaaagttacatgcttttaatgatataaaaattacgagtg-aaaaaatctttacattgacgg 138  Q
    ||||||||||||||||  | |||||| ||| |||||||||||| | |||| |||||| ||||||||| || ||||||||    
T  5186214 tttagaagtagttatcaatgaagttaaatggttttaatgatatgacaattgcgagtgtaaaaaatctgtaaattgacgg 5186136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 21359242 - 21359292
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||| |||| |||||||||| ||||||||||    
T  21359242 ttatcccactaagtggggtcggctgcatgaatcaaattacgccataatgtt 21359292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 645 - 706
Target Start/End: Complemental strand, 21528579 - 21528517
Alignment:
Q  645 acaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaat 706  Q
    ||||||||||| || || ||||||  ||||||||||||||| |||| ||||||||||||||||    
T  21528579 acaacaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 21528517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 23906314 - 23906364
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  23906314 ttatcccactaagtggggtcagctacatggatcaaatgacgccatagtgtt 23906364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 25575089 - 25575039
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||| || |||| ||||||||||||||||||| ||| ||||||    
T  25575089 ttatcccactaaatggggtctgctacatggatcaaattacaccacaatgtt 25575039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 26037522 - 26037572
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||| |||||| ||||| ||||    
T  26037522 ttatcccactaagtggggtcggctacatggatccaattacgccatagtgtt 26037572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 27450197 - 27450247
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  27450197 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 27450247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 31959831 - 31959881
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  31959831 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 31959881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 39100553 - 39100603
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||||||| | ||||| ||||||||||    
T  39100553 ttatcccactaagtggggtcggctacatggattatattacgccataatgtt 39100603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 49939751 - 49939801
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  49939751 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 49939801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 51421995 - 51421945
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||||| |  |||||||||||||||||||  |||||||||    
T  51421995 ttatcccactaagtgagattggctacatggatcaaattacgtcataatgtt 51421945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 51438710 - 51438660
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||| ||||  |||| ||||||||||||||||||| ||||||||||    
T  51438710 ttatcccacaaagttgggtcagctacatggatcaaattacgccataatgtt 51438660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 52569532 - 52569582
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  52569532 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 52569582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 670 - 707
Target Start/End: Original strand, 7544548 - 7544585
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaatt 707  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  7544548 ttatcccactaagtggggtcggctacatggatcaaatt 7544585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 671 - 720
Target Start/End: Original strand, 13805283 - 13805332
Alignment:
Q  671 tatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||||| |||  ||||||||||||||||||  ||||||||||    
T  13805283 tatcccactaagtggggttggctacatggatcaaattatcccataatgtt 13805332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 670 - 715
Target Start/End: Complemental strand, 19969446 - 19969401
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccata 715  Q
    ||||||||||||||| |||| |||||||||||||||| || |||||    
T  19969446 ttatcccactaagtggggtcggctacatggatcaaatgacgccata 19969401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 671 - 720
Target Start/End: Complemental strand, 28486185 - 28486136
Alignment:
Q  671 tatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||  |||||| ||||||||||||||||||| ||||| ||||    
T  28486185 tatcccactaaccgaggtcagctacatggatcaaattacgccatattgtt 28486136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 646 - 718
Target Start/End: Complemental strand, 37488381 - 37488308
Alignment:
Q  646 caacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatg 718  Q
    |||||||||| || || ||||||  ||||||||||||||| ||   ||||||||||||||||||| ||||||||    
T  37488381 caacaacaacaacaacaaccaagccttatcccactaagtggggctggctacatggatcaaattacgccataatg 37488308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 670 - 715
Target Start/End: Original strand, 50238632 - 50238677
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccata 715  Q
    ||||||||||||||| |||| |||||||||||||||| || |||||    
T  50238632 ttatcccactaagtggggtcggctacatggatcaaatgacgccata 50238677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 670 - 715
Target Start/End: Original strand, 50238718 - 50238763
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccata 715  Q
    ||||||||||||||| |||| |||||||||||||||| || |||||    
T  50238718 ttatcccactaagtggggtcggctacatggatcaaatgacgccata 50238763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 670 - 722
Target Start/End: Original strand, 9210721 - 9210773
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgttgt 722  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||||    
T  9210721 ttatcccactaagtggggtcagctacatggatcaaattacgccataatgttgt 9210773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 28708646 - 28708596
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  28708646 ttatcccactaagtggggtcggctacatggatcaaattacgccataatgtt 28708596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 673 - 720
Target Start/End: Original strand, 24376043 - 24376090
Alignment:
Q  673 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||| |||||| ||||||||||||||||||| ||||||||||    
T  24376043 tcccactaagcgaggtcggctacatggatcaaattacgccataatgtt 24376090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 1011311 - 1011261
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||| ||||||||||| ||||||||||    
T  1011311 ttatcccactaagtggggtcggctacatagatcaaattacaccataatgtt 1011261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 2885739 - 2885789
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  2885739 ttatcccactaagtggggtcggctacatggatcaaattacaccatagtgtt 2885789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 647 - 720
Target Start/End: Complemental strand, 6375157 - 6375083
Alignment:
Q  647 aacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||| || ||||||  ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  6375157 aacaacaacgacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 6375083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 28627950 - 28628000
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||||||  ||| ||||||||||||||||||| ||||||||||    
T  28627950 ttatcccactaagtggagtcggctacatggatcaaattacgccataatgtt 28628000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 40979945 - 40979995
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  40979945 ttatcccactaagtggggtcggctacatggatcaaattacgccatagtgtt 40979995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 716
Target Start/End: Complemental strand, 42187706 - 42187660
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataa 716  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||    
T  42187706 ttatcccactaagtggggtcggctacatggatcaaattacgccataa 42187660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 45601741 - 45601691
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||| ||||    
T  45601741 ttatcccactaagtgagttcagctacatggatcaaattacaccatagtgtt 45601691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 47852352 - 47852302
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||| ||||||| |||| ||||||||||||||||||| ||||||||||    
T  47852352 ttatccccctaagtggggtcggctacatggatcaaattacgccataatgtt 47852302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 645 - 720
Target Start/End: Original strand, 28208319 - 28208395
Alignment:
Q  645 acaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||| || || ||||||  ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  28208319 acaacaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 28208395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 643 - 706
Target Start/End: Complemental strand, 29650677 - 29650613
Alignment:
Q  643 gtacaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaat 706  Q
    ||||||||||||| || || ||||||  ||||||||||||||| |||| ||||||||||||||||    
T  29650677 gtacaacaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 29650613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 670 - 717
Target Start/End: Complemental strand, 6263524 - 6263477
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataat 717  Q
    ||||||||||||||| |||| ||||||||||||||||||  |||||||    
T  6263524 ttatcccactaagtggggtcggctacatggatcaaattatgccataat 6263477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 670 - 709
Target Start/End: Complemental strand, 7273365 - 7273326
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattac 709  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  7273365 ttatcccactaagtggggtcggctacatggatcaaattac 7273326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 646 - 720
Target Start/End: Original strand, 12841267 - 12841342
Alignment:
Q  646 caacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||| || || ||||||  ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  12841267 caacaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 12841342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 677 - 720
Target Start/End: Complemental strand, 25891146 - 25891103
Alignment:
Q  677 actaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||| |||| ||||||||||||||||||| ||||||||||    
T  25891146 actaagtggggtcggctacatggatcaaattacaccataatgtt 25891103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 670 - 709
Target Start/End: Complemental strand, 27649045 - 27649006
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattac 709  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  27649045 ttatcccactaagtggggtcggctacatggatcaaattac 27649006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 4604812 - 4604762
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||  ||||||||||||||| ||| ||||||||||    
T  4604812 ttatcccactaagtggggttggctacatggatcaaagtacgccataatgtt 4604762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 11594225 - 11594175
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  11594225 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 11594175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 14057743 - 14057693
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||| |||||||| |||  ||||||||||||||||||| ||||||||||    
T  14057743 ttatcctactaagtggggttggctacatggatcaaattaccccataatgtt 14057693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 14367771 - 14367721
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||| |||||||| |||  ||||||||||||||||||| ||||||||||    
T  14367771 ttatcctactaagtggggttggctacatggatcaaattaccccataatgtt 14367721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 21078182 - 21078132
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||| ||| ||| |||||||||||||||| || ||||||||||    
T  21078182 ttatcccactaaatgaagtcggctacatggatcaaatgacgccataatgtt 21078132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 31682619 - 31682669
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  31682619 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 31682669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 35906218 - 35906268
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  35906218 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 35906268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 36101794 - 36101844
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| ||||  ||||||||||||||||||  |||||||||    
T  36101794 ttatcccactaagtggggtcaactacatggatcaaattacgtcataatgtt 36101844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 36652257 - 36652207
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  36652257 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 36652207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 37618210 - 37618160
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  37618210 ttatcccactaagtggggtcggctacatggatcaaatgacaccatagtgtt 37618160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 39906389 - 39906439
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  39906389 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 39906439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 708
Target Start/End: Complemental strand, 42969963 - 42969925
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaatta 708  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  42969963 ttatcccactaagtggggtcggctacatggatcaaatta 42969925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 44855191 - 44855241
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||| |||||||| ||||| ||||    
T  44855191 ttatcccactaagtggggtcggctacatggaccaaattacgccatagtgtt 44855241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 45836499 - 45836549
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  45836499 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 45836549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 47652812 - 47652762
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||| ||||||| |||| ||||||||||    
T  47652812 ttatcccactaagtggggtcggctacagggatcaagttacgccataatgtt 47652762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 646 - 706
Target Start/End: Complemental strand, 31005495 - 31005434
Alignment:
Q  646 caacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaat 706  Q
    |||||||||| || || ||||||  ||||||||||||||| |||| ||||||||||||||||    
T  31005495 caacaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 31005434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.000000000001; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 490600 - 490550
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  490600 ttatcccactaagtggggtcggctacatggatcaaattacgccataatgtt 490550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 1928604 - 1928654
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  1928604 ttatcccactaagtggggtcggctacatggatcaaattacgccataatgtt 1928654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 45419500 - 45419450
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  45419500 ttatcccactaagtggggtcggctacatggatcaaattacaccataatgtt 45419450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 670 - 718
Target Start/End: Original strand, 45041333 - 45041381
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatg 718  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||    
T  45041333 ttatcccactaagtggggtcagctacatggatcaaattacgccataatg 45041381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 669 - 720
Target Start/End: Complemental strand, 30690001 - 30689950
Alignment:
Q  669 attatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||||||| |||| |||||||||||||||||||  |||||||||    
T  30690001 attatcccactaagtggggtcggctacatggatcaaattacgtcataatgtt 30689950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 35914618 - 35914668
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||| ||||||||| |||| ||||||||||||||||||| ||||||||||    
T  35914618 ttatctcactaagtggggtcagctacatggatcaaattacgccataatgtt 35914668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 669 - 720
Target Start/End: Complemental strand, 1313830 - 1313779
Alignment:
Q  669 attatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||||||| ||||  |||||||||| ||||||| ||||||||||    
T  1313830 attatcccactaagtggggtcaactacatggataaaattacgccataatgtt 1313779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 669 - 720
Target Start/End: Complemental strand, 29520915 - 29520864
Alignment:
Q  669 attatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||| || |||  ||||||||||||||||||| ||||||||||    
T  29520915 attatcccactaaatggggtgggctacatggatcaaattacgccataatgtt 29520864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 673 - 720
Target Start/End: Complemental strand, 32931222 - 32931175
Alignment:
Q  673 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||| |||| ||||||||||||||||||  ||||||||||    
T  32931222 tcccactaagtggggtcggctacatggatcaaattatgccataatgtt 32931175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 11523740 - 11523790
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  11523740 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 11523790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 12491155 - 12491205
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  12491155 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 12491205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 14742099 - 14742149
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  14742099 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 14742149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 16035744 - 16035794
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||| ||||||||||  |||||||||    
T  16035744 ttatcccactaagtggggtcagctacatgaatcaaattacgtcataatgtt 16035794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 18741897 - 18741847
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||| |||||||||||||  |||||||||    
T  18741897 ttatcccactaagtggggtcggctacttggatcaaattacgtcataatgtt 18741847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 18746861 - 18746811
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||| |||||||||||||  |||||||||    
T  18746861 ttatcccactaagtggggtcggctacttggatcaaattacgtcataatgtt 18746811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 674 - 720
Target Start/End: Original strand, 27556323 - 27556369
Alignment:
Q  674 cccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||| |||| ||||||||||||||||||  ||||||||||    
T  27556323 cccactaagtggggtcggctacatggatcaaattatgccataatgtt 27556369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 32276950 - 32276900
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| | ||  |||||||||||||||||| ||||||||||    
T  32276950 ttatcccactaagtgggttcgtctacatggatcaaattacgccataatgtt 32276900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 36565258 - 36565308
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  36565258 ttatcccactaagtggggtcggctacatggatcaaataacgccatagtgtt 36565308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 645 - 706
Target Start/End: Original strand, 44047523 - 44047585
Alignment:
Q  645 acaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaat 706  Q
    ||||||||||| || || ||||||  ||||||||||||||| |||| ||||||||||||||||    
T  44047523 acaacaacaacaacaacaaccaagccttatcccactaagtggggtcagctacatggatcaaat 44047585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 719
Target Start/End: Complemental strand, 14903822 - 14903777
Alignment:
Q  674 cccactaagtgaggtccgctacatggatcaaattactccataatgt 719  Q
    ||||||||||| |||  ||||||||||||||||||| |||||||||    
T  14903822 cccactaagtggggtaagctacatggatcaaattacgccataatgt 14903777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.000000000001; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 34522 - 34572
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  34522 ttatcccactaagtggggtcagctacatggatcaaattacgccataatgtt 34572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 30031521 - 30031471
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||| ||||    
T  30031521 ttatcccactaagtgaggtcggctacatggatcaaattacgccatagtgtt 30031471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 12890840 - 12890790
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  12890840 ttatcccactaagtggggtcggctacatggatcaaattacgccatagtgtt 12890790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 670 - 709
Target Start/End: Complemental strand, 5897722 - 5897683
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattac 709  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  5897722 ttatcccactaagtgggatccgctacatggatcaaattac 5897683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 673 - 720
Target Start/End: Complemental strand, 8364818 - 8364771
Alignment:
Q  673 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||| | |||| ||||||||||||||||||| ||||||||||    
T  8364818 tcccactaagcggggtcggctacatggatcaaattacgccataatgtt 8364771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 456 - 499
Target Start/End: Original strand, 10813318 - 10813361
Alignment:
Q  456 aaagaaaaaatgttataatttcagggattaaaatcatatttaaa 499  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  10813318 aaagaaaaaatgttataattacatggattaaagtcatatttaaa 10813361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 669 - 720
Target Start/End: Complemental strand, 31819097 - 31819046
Alignment:
Q  669 attatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  31819097 attatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 31819046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 644 - 717
Target Start/End: Complemental strand, 579710 - 579636
Alignment:
Q  644 tacaacaacaacgacgacgaccaagatt-atcccactaagtgaggtccgctacatggatcaaattactccataat 717  Q
    |||||||||||| || || |||||| || ||||||||||||| | || ||||||| ||||||||||| |||||||    
T  579710 tacaacaacaacaacaacaaccaagctttatcccactaagtgggatcggctacatagatcaaattacgccataat 579636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 655411 - 655461
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||||||||  |||||||||||||||| | ||| ||||||    
T  655411 ttatcccactaagtgaggtcacctacatggatcaaattgcaccacaatgtt 655461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 3206476 - 3206526
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  3206476 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 3206526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 5096099 - 5096049
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| | || ||||||| ||||||||||| ||||||||||    
T  5096099 ttatcccactaagtgggatcggctacatagatcaaattacgccataatgtt 5096049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 18130831 - 18130881
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||| || ||| |||| ||||||||||||||||||| ||||||||||    
T  18130831 ttatcccattaggtggggtcggctacatggatcaaattacaccataatgtt 18130881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 23888495 - 23888545
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||| || ||| |||| ||||||||||||||||||| ||||||||||    
T  23888495 ttatcccattaggtggggtctgctacatggatcaaattacaccataatgtt 23888545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 28085641 - 28085591
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  28085641 ttatcccactaagtggggtcggctacatggatcaaatgacaccatagtgtt 28085591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 678 - 720
Target Start/End: Complemental strand, 30643026 - 30642984
Alignment:
Q  678 ctaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||| |||| ||||||| ||||||||||||||||||||||    
T  30643026 ctaagtggggtcggctacatagatcaaattactccataatgtt 30642984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 32068685 - 32068635
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| | || |||||||| |||||||||| ||||||||||    
T  32068685 ttatcccactaagtgggatcggctacatgtatcaaattacgccataatgtt 32068635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 648 - 720
Target Start/End: Original strand, 5258142 - 5258215
Alignment:
Q  648 acaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||| || || ||||||| ||||||||||||||| |||| ||||| |||||||||| || ||||| ||||    
T  5258142 acaacaacaacaacaaccaagacttatcccactaagtggggtcggctacgtggatcaaatgacgccatagtgtt 5258215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.000000000001; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 27386605 - 27386555
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  27386605 ttatcccactaagtggggtcggctacatggatcaaattacgccataatgtt 27386555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 663 - 720
Target Start/End: Original strand, 32442135 - 32442192
Alignment:
Q  663 accaagattatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||| |||||||||||||||  ||| ||||||||||||||||||| ||||||||||    
T  32442135 accaagcttatcccactaagtggagtcggctacatggatcaaattacgccataatgtt 32442192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 670 - 722
Target Start/End: Complemental strand, 41894338 - 41894286
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgttgt 722  Q
    ||||||||||||||| |||  ||||||||||||||||||| ||||||||||||    
T  41894338 ttatcccactaagtggggttggctacatggatcaaattacaccataatgttgt 41894286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 14668036 - 14667986
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| | ||||||||||||||||| ||||||||||    
T  14668036 ttatcccactaagtggggtcggttacatggatcaaattacaccataatgtt 14667986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 20457038 - 20456988
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||||||||    
T  20457038 ttatcccactaagtggggtcggctacatggatcaaatgacgccataatgtt 20456988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 29922549 - 29922499
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||| |||||||||  ||||||||||||||||||| ||||||||||    
T  29922549 ttatcccaccaagtgaggttggctacatggatcaaattacgccataatgtt 29922499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 38132601 - 38132551
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| || |||||||||||||||| ||||||||||    
T  38132601 ttatcccactaagtggggtcggccacatggatcaaattacgccataatgtt 38132551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 42272742 - 42272692
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||||||||    
T  42272742 ttatcccactaagtggggtcagctacatggatcaaatgacgccataatgtt 42272692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 671 - 720
Target Start/End: Original strand, 418052 - 418101
Alignment:
Q  671 tatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||| ||||| |||| ||||||||||||||||||| ||||||||||    
T  418052 tatcccaccaagtggggtcggctacatggatcaaattacgccataatgtt 418101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 673 - 720
Target Start/End: Original strand, 7359281 - 7359328
Alignment:
Q  673 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||| |||| |||||||||||||||||||  |||||||||    
T  7359281 tcccactaagtggggtcagctacatggatcaaattacgtcataatgtt 7359328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 670 - 717
Target Start/End: Original strand, 38105280 - 38105327
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataat 717  Q
    |||||||||| |||||||| | |||||||||||||||||| |||||||    
T  38105280 ttatcccacttagtgaggtacactacatggatcaaattacgccataat 38105327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 676 - 719
Target Start/End: Original strand, 41108752 - 41108795
Alignment:
Q  676 cactaagtgaggtccgctacatggatcaaattactccataatgt 719  Q
    ||||||||| |||| ||||||||||||||||||| |||||||||    
T  41108752 cactaagtggggtcagctacatggatcaaattacgccataatgt 41108795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 1275529 - 1275479
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| ||  |||||||||    
T  1275529 ttatcccactaagtggggtcggctacatggatcaaatgacgtcataatgtt 1275479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 2915513 - 2915563
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  2915513 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 2915563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 708
Target Start/End: Complemental strand, 5558406 - 5558368
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaatta 708  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  5558406 ttatcccactaagtggggtcggctacatggatcaaatta 5558368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 7678742 - 7678692
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||||||||||| |||  |||||||||    
T  7678742 ttatcccactaagtggggtcggctacatggatcaaactacctcataatgtt 7678692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 9235311 - 9235262
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||||||||||||||  ||||||||||    
T  9235311 ttatcccactaagtg-ggtcggctacatggatcaaattatgccataatgtt 9235262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 13561403 - 13561453
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  13561403 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 13561453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 644 - 709
Target Start/End: Complemental strand, 14666004 - 14665938
Alignment:
Q  644 tacaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattac 709  Q
    |||||||||||| || || ||||||  ||||||||||||||| |||| ||||||| |||||||||||    
T  14666004 tacaacaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatagatcaaattac 14665938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 708
Target Start/End: Complemental strand, 18855872 - 18855834
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaatta 708  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  18855872 ttatcccactaagtggggtcggctacatggatcaaatta 18855834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 29816647 - 29816597
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  29816647 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 29816597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 30213840 - 30213790
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  30213840 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 30213790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 30639733 - 30639783
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||| || |||| ||||||||||||||||||| ||| ||||||    
T  30639733 ttatcccactaaatggggtcggctacatggatcaaattacaccacaatgtt 30639783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 38685232 - 38685182
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  38685232 ttatcccactaagtggggtcggctacatggatcaaatgacgccatattgtt 38685182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 716
Target Start/End: Original strand, 39322096 - 39322142
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataa 716  Q
    ||||||||||||||| | || ||||||||||||||||||| ||||||    
T  39322096 ttatcccactaagtgggatcggctacatggatcaaattacgccataa 39322142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 42576275 - 42576225
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||  |||| ||||||||||||||||||| |||| |||||    
T  42576275 ttatcccactaagtcgggtcggctacatggatcaaattacgccattatgtt 42576225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 670 - 715
Target Start/End: Original strand, 408511 - 408556
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccata 715  Q
    ||||||||||||||| |||| |||||||||||||||| || |||||    
T  408511 ttatcccactaagtggggtcggctacatggatcaaatgacgccata 408556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 671 - 720
Target Start/End: Original strand, 11069180 - 11069229
Alignment:
Q  671 tatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||| ||| |||| |||| |||||||||||||| ||||||||||    
T  11069180 tatcccactatgtggggtcagctatatggatcaaattacgccataatgtt 11069229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.000000000001; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 9531617 - 9531667
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  9531617 ttatcccactaagtggggtcggctacatggatcaaattacgccataatgtt 9531667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 669 - 720
Target Start/End: Original strand, 887081 - 887132
Alignment:
Q  669 attatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||| ||||| |||| ||||||||||||||||||| ||||||||||    
T  887081 attatcccaccaagtggggtcagctacatggatcaaattacgccataatgtt 887132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 673 - 720
Target Start/End: Original strand, 3720435 - 3720482
Alignment:
Q  673 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  3720435 tcccactaagtggggtcggctacatggatcaaattacaccataatgtt 3720482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 670 - 717
Target Start/End: Original strand, 10516766 - 10516813
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataat 717  Q
    ||||||||||||||||| || ||||||||||||||||||| |||||||    
T  10516766 ttatcccactaagtgagatcagctacatggatcaaattacgccataat 10516813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 11412975 - 11412925
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||| |||||||||| || ||||||||||||||||||| ||||||||||    
T  11412975 ttatcctactaagtgagttcggctacatggatcaaattacaccataatgtt 11412925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 12520079 - 12520129
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  12520079 ttatcccactaagtggggtcggctacatggatcaaattacgccatagtgtt 12520129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 12882062 - 12882112
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||||||||||  ||||||||||||||||||| ||| ||||||    
T  12882062 ttatcccactaagtgaggtaggctacatggatcaaattacgccaaaatgtt 12882112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 18959176 - 18959126
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||||||||||||||||  ||||||||||    
T  18959176 ttatcccactaagtggggtcagctacatggatcaaattatgccataatgtt 18959126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 25384734 - 25384684
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||||||||||  ||||||||||||||||||| ||||| ||||    
T  25384734 ttatcccactaagtgaggttggctacatggatcaaattacgccatagtgtt 25384684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 33504489 - 33504439
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||| |||||||||||||| ||||||||||    
T  33504489 ttatcccactaagtggggtcggctagatggatcaaattacgccataatgtt 33504439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 716
Target Start/End: Original strand, 43573147 - 43573193
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataa 716  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||    
T  43573147 ttatcccactaagtggggtcggctacatggatcaaattacgccataa 43573193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 671 - 720
Target Start/End: Original strand, 39709219 - 39709268
Alignment:
Q  671 tatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  39709219 tatcccactaagtggggtcggctacatggatcaaattacgccatagtgtt 39709268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 670 - 722
Target Start/End: Complemental strand, 440981 - 440929
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgttgt 722  Q
    ||||||| |||||||  ||| ||||||||||||||||||| ||||||||||||    
T  440981 ttatccctctaagtggagtcagctacatggatcaaattacgccataatgttgt 440929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 645 - 720
Target Start/End: Original strand, 3635314 - 3635390
Alignment:
Q  645 acaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||| || || ||||||  ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  3635314 acaacaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 3635390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 645 - 720
Target Start/End: Complemental strand, 12734991 - 12734915
Alignment:
Q  645 acaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||| || || ||||||  ||||||||||||||| ||||  |||||||||||||||||| ||||| ||||    
T  12734991 acaacaacaacaacaacaaccaagccttatcccactaagtggggtcgactacatggatcaaattacaccatagtgtt 12734915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 677 - 720
Target Start/End: Complemental strand, 3481412 - 3481369
Alignment:
Q  677 actaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||| |||| ||||||||||||||||||| ||||||||||    
T  3481412 actaagtggggtcagctacatggatcaaattacgccataatgtt 3481369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 673 - 720
Target Start/End: Complemental strand, 9496128 - 9496081
Alignment:
Q  673 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||| |||  ||||||||||||||||||| ||||||||||    
T  9496128 tcccactaagtggggttggctacatggatcaaattacgccataatgtt 9496081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 669 - 720
Target Start/End: Original strand, 45543089 - 45543140
Alignment:
Q  669 attatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||||||||||| |||| ||||||| ||||||| ||| ||||||||||    
T  45543089 attatcccactaagtggggtcggctacatagatcaaagtacgccataatgtt 45543140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 227454 - 227404
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  227454 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 227404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 4807860 - 4807810
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  4807860 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 4807810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 11992125 - 11992175
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||| |||||||||| |||| |||||||||||||||| || ||||||||||    
T  11992125 ttattccactaagtggggtcagctacatggatcaaataacgccataatgtt 11992175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 12474944 - 12474994
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  12474944 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 12474994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 17670733 - 17670683
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  17670733 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 17670683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 28508943 - 28508893
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  28508943 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 28508893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 30306297 - 30306247
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  30306297 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 30306247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 38435217 - 38435167
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||| |||||||||| | || ||||||||||||||||||| ||||||||||    
T  38435217 ttatgccactaagtgggatcggctacatggatcaaattacgccataatgtt 38435167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 670 - 707
Target Start/End: Original strand, 16521024 - 16521061
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaatt 707  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  16521024 ttatcccactaagtggggtcggctacatggatcaaatt 16521061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 679 - 720
Target Start/End: Original strand, 32364947 - 32364988
Alignment:
Q  679 taagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||    
T  32364947 taagtgaggtcagctacattgatcaaattacaccataatgtt 32364988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 596 - 546
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  596 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 3702 - 3652
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| ||||| |||||||||||||  |||||||||    
T  3702 ttatcccactaagtggggtcggctacttggatcaaattacgtcataatgtt 3652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0392 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0392
Description:

Target: scaffold0392; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 6789 - 6839
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||  ||||||||||||||||||  ||||||||||    
T  6789 ttatcccactaagtggggttggctacatggatcaaattatgccataatgtt 6839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 28906 - 28956
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  28906 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 28956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 58243 - 58293
Alignment:
Q  670 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    ||||||||||||||  |||| |||||||||||||||||||  |||||||||    
T  58243 ttatcccactaagttgggtcggctacatggatcaaattacgacataatgtt 58293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 648 - 720
Target Start/End: Complemental strand, 14871 - 14798
Alignment:
Q  648 acaacaacgacgacgaccaagatt-atcccactaagtgaggtccgctacatggatcaaattactccataatgtt 720  Q
    |||||||| || || ||||||||| ||||||||| ||| |||  ||||||||||||||||||| ||||| ||||    
T  14871 acaacaacaacaacaaccaagatttatcccactacgtggggttggctacatggatcaaattacgccatagtgtt 14798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University