View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5970_high_60 (Length: 230)
Name: NF5970_high_60
Description: NF5970
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5970_high_60 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 7093406 - 7093176
Alignment:
| Q |
1 |
taatactaaaccatttcttttggtgaagagaaacaatctcttgaaagt-gaaagagtttgtttatgaataaacacaatgattacattgtttcgatgaacc |
99 |
Q |
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| T |
7093406 |
taatactcaaccatttcctttggtgaagagaaacaatctcttgaaagttgaaagagtttgtttatgaataaacacaatgattacattgtttcgatgaacc |
7093307 |
T |
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| Q |
100 |
annnnnnnnnnnnatagtgcacaagagtaatcgaagaaattttattctataagctattattgatcgataaggttgatatgagtgtgcaagccacgtccaa |
199 |
Q |
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| T |
7093306 |
atttttcttttttatagtgcacaagagtaatcgaagaaattttattctataagctattattgatcgataagattgatatgagtgtgcaagccacgtccaa |
7093207 |
T |
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| Q |
200 |
aattttaaactatcataaaggagtttcacca |
230 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
7093206 |
aattttaaactatcataaaggagtttcacca |
7093176 |
T |
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