View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5970_low_8 (Length: 506)
Name: NF5970_low_8
Description: NF5970
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5970_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 461; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 461; E-Value: 0
Query Start/End: Original strand, 8 - 492
Target Start/End: Original strand, 51507460 - 51507944
Alignment:
| Q |
8 |
aagcaaagggtatcaagccaaatggtccatcccattatgaatttgccttggcccacaataacaatgcatgaattggaacctctcttagagaggcatggag |
107 |
Q |
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| T |
51507460 |
aagcaaagagtatcaagccaaatggtccatcccattatgaatttgccttggcccacaataacaatgcatgaattggaacctctcttagagaggcatggag |
51507559 |
T |
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| Q |
108 |
agacagaagaagacactgaatacgatcgaataacatgacaaaaattgcagtgtattcagaatggccaataagaaattatgagtgagacacctagattttc |
207 |
Q |
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| T |
51507560 |
agacagaagaagacactgaatacgattgaataacatgacaaaaattgcagtgtattcagaatggccaataagaaattatgagtgagacacctagattttc |
51507659 |
T |
|
| Q |
208 |
ttatcgtgactttcataggtatctagaatttcctattatcatgtattccttcaggtatggggagccgtacgggtacatcaatataaaattagtttttaat |
307 |
Q |
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| T |
51507660 |
ttatcgtgactttcataggtatctagaatttcctattatcatgtattccttcaggtatggggagctgtacgggtacatcaatataaaattagtttttaat |
51507759 |
T |
|
| Q |
308 |
cataatataacatgatagaattatattgttcaaatggcaaccaaaatcaaaaatctatttgttcaaaaaactcaagatctatatgcatgactattaaaaa |
407 |
Q |
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| T |
51507760 |
cataatataacatgatagaattatattgttcaaatggaaaccaaaatcaaaaacctatttgttcaaaaaactcaagatctatatgcatgactattaaaaa |
51507859 |
T |
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| Q |
408 |
tcacactctgacactgtcaataacaatatcactatatctttttccgcaagtaaaagttcaagttttaaataaatggctgcttact |
492 |
Q |
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| T |
51507860 |
tcacactctgacactgtcaataacaatatcactatatctttttccccaagtaaaagttcaagttttaaataaatggctgcttact |
51507944 |
T |
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