View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5971-Insertion-15 (Length: 195)
Name: NF5971-Insertion-15
Description: NF5971
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5971-Insertion-15 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 144; Significance: 6e-76; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 8 - 195
Target Start/End: Complemental strand, 34045841 - 34045663
Alignment:
| Q |
8 |
aataaatgcacaagttaagaggcaattttgggtataagattatggataatgtgagatacatacaaatttaagtaaaatagaaataggctattataggaga |
107 |
Q |
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| T |
34045841 |
aataaatgcacaagttaagaggcaattttgggtataagattatggataatgtgagatacatacaaattaaagtaaaatagaaataggctattataggtga |
34045742 |
T |
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| Q |
108 |
tattgatgggtgttaaattattcggtggtggttccattaggaggaagtagcaatgttagacaagaaatatgccttacacggaacaacc |
195 |
Q |
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| T |
34045741 |
tattgatgggtgttaaattattcggtggtg---------ggaggaagtagcaatgttagacaagaaatatgctttacacggaacaacc |
34045663 |
T |
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