View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5971-Insertion-3 (Length: 925)

Name: NF5971-Insertion-3
Description: NF5971
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5971-Insertion-3
NF5971-Insertion-3
[»] chr7 (27 HSPs)
chr7 (646-904)||(21261080-21261339)
chr7 (646-904)||(23082026-23082285)
chr7 (646-904)||(10037980-10038239)
chr7 (647-860)||(24902800-24903013)
chr7 (646-901)||(26132206-26132449)
chr7 (741-904)||(23960675-23960838)
chr7 (743-904)||(6045969-6046130)
chr7 (646-723)||(10661933-10662010)
chr7 (646-902)||(10661514-10661772)
chr7 (662-874)||(7585816-7586017)
chr7 (669-792)||(14927407-14927531)
chr7 (669-792)||(15350873-15350997)
chr7 (647-779)||(15507005-15507139)
chr7 (741-904)||(42636856-42637019)
chr7 (647-789)||(20992308-20992453)
chr7 (646-723)||(10280676-10280753)
chr7 (741-901)||(20924453-20924614)
chr7 (647-787)||(12326579-12326721)
chr7 (741-789)||(16207227-16207275)
chr7 (654-723)||(6046107-6046176)
chr7 (646-691)||(14166025-14166070)
chr7 (744-792)||(10280606-10280654)
chr7 (646-690)||(11520660-11520704)
chr7 (646-691)||(645997-646042)
chr7 (646-691)||(3801870-3801915)
chr7 (647-700)||(20924358-20924411)
chr7 (742-791)||(23579313-23579362)
[»] chr8 (10 HSPs)
chr8 (640-904)||(20254121-20254386)
chr8 (646-904)||(9997147-9997407)
chr8 (647-723)||(9997556-9997632)
chr8 (646-789)||(27924701-27924847)
chr8 (647-794)||(18622421-18622566)
chr8 (646-782)||(33977831-33977966)
chr8 (646-789)||(33962498-33962640)
chr8 (647-782)||(26537059-26537196)
chr8 (742-779)||(45136885-45136922)
chr8 (651-798)||(23540661-23540810)
[»] chr1 (23 HSPs)
chr1 (647-904)||(41330633-41330891)
chr1 (647-865)||(10339410-10339629)
chr1 (642-901)||(1626225-1626486)
chr1 (646-789)||(25349479-25349623)
chr1 (647-789)||(20840514-20840658)
chr1 (646-722)||(15803464-15803540)
chr1 (647-723)||(47940113-47940189)
chr1 (646-711)||(17838229-17838294)
chr1 (743-838)||(8282635-8282731)
chr1 (647-723)||(12759299-12759375)
chr1 (647-782)||(24986755-24986892)
chr1 (646-723)||(11667152-11667229)
chr1 (646-782)||(20200338-20200476)
chr1 (752-838)||(15914801-15914888)
chr1 (646-723)||(4246873-4246950)
chr1 (646-723)||(23477186-23477263)
chr1 (743-839)||(51471439-51471536)
chr1 (743-789)||(12753825-12753871)
chr1 (647-691)||(13166259-13166303)
chr1 (816-904)||(25349626-25349712)
chr1 (741-789)||(26971744-26971792)
chr1 (741-890)||(17850773-17850923)
chr1 (646-691)||(22891092-22891137)
[»] chr6 (39 HSPs)
chr6 (647-889)||(26964805-26965047)
chr6 (647-904)||(24564364-24564622)
chr6 (652-888)||(19598347-19598574)
chr6 (743-904)||(11961119-11961280)
chr6 (652-904)||(19658565-19658821)
chr6 (646-888)||(15930098-15930342)
chr6 (646-789)||(12385108-12385252)
chr6 (647-789)||(13196089-13196233)
chr6 (647-723)||(11961257-11961333)
chr6 (647-723)||(17868220-17868296)
chr6 (647-723)||(17878003-17878079)
chr6 (741-872)||(23882044-23882176)
chr6 (650-721)||(3566104-3566175)
chr6 (648-723)||(24542669-24542744)
chr6 (745-864)||(17868275-17868394)
chr6 (745-864)||(17878058-17878177)
chr6 (647-723)||(29252929-29253005)
chr6 (646-723)||(21316889-21316964)
chr6 (650-699)||(23880944-23880993)
chr6 (647-723)||(17863724-17863800)
chr6 (741-789)||(33666556-33666604)
chr6 (744-794)||(34639555-34639605)
chr6 (647-723)||(8464917-8464993)
chr6 (650-770)||(20465165-20465288)
chr6 (646-691)||(21722657-21722702)
chr6 (741-782)||(25806180-25806221)
chr6 (647-696)||(33666649-33666698)
chr6 (741-789)||(9281056-9281104)
chr6 (647-691)||(11992271-11992315)
chr6 (741-789)||(17235359-17235407)
chr6 (741-789)||(19077908-19077956)
chr6 (647-691)||(20653935-20653979)
chr6 (741-789)||(23879650-23879698)
chr6 (741-789)||(25970442-25970490)
chr6 (741-789)||(25974882-25974930)
chr6 (743-794)||(21316941-21316992)
chr6 (646-696)||(17856055-17856105)
chr6 (647-696)||(19168306-19168355)
chr6 (646-691)||(21705779-21705824)
[»] chr3 (25 HSPs)
chr3 (649-901)||(979634-979884)
chr3 (647-901)||(286151-286404)
chr3 (647-824)||(3551731-3551908)
chr3 (646-723)||(6578571-6578648)
chr3 (659-872)||(6578812-6579026)
chr3 (647-782)||(21547555-21547692)
chr3 (745-826)||(21253347-21253428)
chr3 (647-700)||(28052190-28052243)
chr3 (647-723)||(21253293-21253368)
chr3 (646-779)||(28051913-28052048)
chr3 (646-690)||(18482622-18482666)
chr3 (647-721)||(296231-296305)
chr3 (744-786)||(11657067-11657109)
chr3 (646-696)||(15572255-15572305)
chr3 (741-791)||(18063553-18063603)
chr3 (741-782)||(18482719-18482760)
chr3 (647-787)||(13514868-13515010)
chr3 (647-691)||(17135395-17135439)
chr3 (741-789)||(17135491-17135539)
chr3 (647-691)||(23953808-23953852)
chr3 (743-794)||(214443-214494)
chr3 (647-690)||(7028321-7028364)
chr3 (744-838)||(18477809-18477904)
chr3 (743-794)||(25020156-25020207)
chr3 (743-789)||(17042108-17042154)
[»] chr4 (29 HSPs)
chr4 (678-904)||(32862294-32862522)
chr4 (646-899)||(41786088-41786332)
chr4 (659-904)||(9069594-9069840)
chr4 (647-904)||(15623086-15623344)
chr4 (646-787)||(19182932-19183074)
chr4 (646-723)||(10683258-10683335)
chr4 (642-723)||(10723309-10723390)
chr4 (646-723)||(10896898-10896975)
chr4 (642-723)||(10937078-10937159)
chr4 (646-723)||(10718485-10718562)
chr4 (646-723)||(10932254-10932331)
chr4 (647-723)||(15161753-15161829)
chr4 (647-771)||(10724980-10725106)
chr4 (647-771)||(10938749-10938875)
chr4 (646-723)||(33744498-33744575)
chr4 (647-723)||(15699587-15699663)
chr4 (743-794)||(10197596-10197647)
chr4 (646-789)||(16384655-16384800)
chr4 (14-57)||(51996001-51996044)
chr4 (14-57)||(52008533-52008576)
chr4 (744-794)||(10718235-10718285)
chr4 (744-794)||(10932004-10932054)
chr4 (741-789)||(18601006-18601054)
chr4 (744-838)||(49974963-49975058)
chr4 (570-633)||(52007902-52007964)
chr4 (744-794)||(10683007-10683057)
chr4 (744-794)||(10896647-10896697)
chr4 (647-696)||(25117716-25117765)
chr4 (294-331)||(52008081-52008118)
[»] chr2 (13 HSPs)
chr2 (646-904)||(21249447-21249707)
chr2 (647-780)||(15329094-15329228)
chr2 (647-723)||(21531210-21531286)
chr2 (738-794)||(27108203-27108259)
chr2 (743-832)||(31588201-31588291)
chr2 (741-789)||(24789505-24789553)
chr2 (647-690)||(12911358-12911401)
chr2 (646-689)||(23759491-23759534)
chr2 (743-794)||(27111792-27111843)
chr2 (744-866)||(36397839-36397961)
chr2 (646-691)||(22614405-22614450)
chr2 (659-723)||(24311162-24311224)
chr2 (743-788)||(24311201-24311246)
[»] chr5 (17 HSPs)
chr5 (647-904)||(13941266-13941518)
chr5 (652-899)||(20713999-20714247)
chr5 (646-787)||(22081941-22082083)
chr5 (646-788)||(23624607-23624750)
chr5 (646-789)||(26037542-26037687)
chr5 (646-788)||(38406127-38406270)
chr5 (647-708)||(18221957-18222018)
chr5 (647-723)||(26328467-26328543)
chr5 (741-789)||(30605037-30605085)
chr5 (649-707)||(23419809-23419867)
chr5 (646-691)||(22251290-22251335)
chr5 (647-691)||(22240228-22240272)
chr5 (741-789)||(22251387-22251435)
chr5 (647-691)||(22404011-22404055)
chr5 (647-691)||(24190728-24190772)
chr5 (743-833)||(25674425-25674517)
chr5 (669-723)||(20740302-20740354)
[»] scaffold0035 (1 HSPs)
scaffold0035 (647-858)||(38001-38213)
[»] scaffold0008 (1 HSPs)
scaffold0008 (646-723)||(36573-36650)
[»] scaffold0226 (3 HSPs)
scaffold0226 (646-789)||(17374-17519)
scaffold0226 (646-789)||(26768-26913)
scaffold0226 (647-782)||(6789-6927)
[»] scaffold0213 (1 HSPs)
scaffold0213 (646-723)||(7828-7905)
[»] scaffold0185 (2 HSPs)
scaffold0185 (645-691)||(1616-1662)
scaffold0185 (741-789)||(1714-1762)
[»] scaffold0129 (1 HSPs)
scaffold0129 (741-789)||(16270-16318)
[»] scaffold0520 (2 HSPs)
scaffold0520 (743-794)||(5727-5778)
scaffold0520 (743-794)||(11982-12033)
[»] scaffold0359 (1 HSPs)
scaffold0359 (646-691)||(2754-2799)
[»] scaffold0103 (2 HSPs)
scaffold0103 (646-691)||(24927-24972)
scaffold0103 (741-789)||(25024-25072)
[»] scaffold0088 (2 HSPs)
scaffold0088 (744-789)||(37355-37400)
scaffold0088 (647-696)||(37448-37497)
[»] scaffold1001 (1 HSPs)
scaffold1001 (741-789)||(727-775)
[»] scaffold0190 (1 HSPs)
scaffold0190 (741-789)||(15967-16015)
[»] scaffold0006 (1 HSPs)
scaffold0006 (741-789)||(88511-88559)
[»] scaffold0037 (1 HSPs)
scaffold0037 (646-691)||(109508-109553)
[»] scaffold0024 (1 HSPs)
scaffold0024 (646-691)||(159936-159981)


Alignment Details
Target: chr7 (Bit Score: 137; Significance: 5e-71; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 646 - 904
Target Start/End: Complemental strand, 21261339 - 21261080
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt-gccattactacaaga 744  Q
    |||||||||||||||||||||| ||| |||| ||||| |||||| ||||||||||||||||||||| |||||||||||  | || | |||| ||  ||||    
T  21261339 ttgttgggtatttgtattggctgcatcattgctaaaataaatattcatgattgtgatgttggatactatgttccaacatgttttaggcatttctgtaaga 21261240  T
Q  745 tgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatg-ttgtacgcgggctttatcttattaaggaatccacgttctc 843  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||| | || ||||||||| |||||||||||||||||||||||||| |||    
T  21261239 tgttggatatgatgttccaacatcctggcacggttcagtgtgccttgttttatg-cttgattgtacgcgcgctttatcttattaaggaatccacgtcctc 21261141  T
Q  844 atatcttgatgaccaagcaacgcacatatttgttcataatcagttgtatttttattcctaa 904  Q
    |||||||| |||||||||||||| ||||| |||||| ||||||||||  ||||||| ||||    
T  21261140 atatcttgctgaccaagcaacgcgcatatctgttcagaatcagttgtggttttatttctaa 21261080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 646 - 904
Target Start/End: Original strand, 23082026 - 23082285
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt-gccattactacaaga 744  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| || |||||||||||  | || | |||| ||  ||||    
T  23082026 ttgttgggtatttgtattggctgcattattgctaaaacaaatatccatgattgtgatgttggaaactatgttccaacatgttttaggcatttctgtaaga 23082125  T
Q  745 tgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatcttattaaggaatccacgttctca 844  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||| ||||||| |   || |||||| |||||||||||||||||||||||| ||||||    
T  23082126 tgttggatatgatgttccaacatcctggcacggttcagtgtgccttattttatgcctgattatacgcgcgctttatcttattaaggaatccacattctca 23082225  T
Q  845 tatcttgatgaccaagcaacgcacatatttgttcataatcagttgtatttttattcctaa 904  Q
    ||||||| ||| |||||||||| ||||| | |||| |||||| |||  ||||||||||||    
T  23082226 tatcttgttgatcaagcaacgcgcatatctattcagaatcagctgtgattttattcctaa 23082285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 646 - 904
Target Start/End: Original strand, 10037980 - 10038239
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt-gccattactacaaga 744  Q
    |||||||||||||||||||||| ||||||||  |||||||||||||||| ||||  |||||||||| |||||||||||  | || | |||| ||  ||||    
T  10037980 ttgttgggtatttgtattggctgcattattgcgaaaacaaatatccatgtttgtattgttggatactatgttccaacatgttttaggcatttctgtaaga 10038079  T
Q  745 tgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatcttattaaggaatccacgttctca 844  Q
    |||||||||| |||||||||||| ||| || ||||||| ||||||||||||||| |   ||||||||  |||||||||||||||||||||||| | ||||    
T  10038080 tgttggatataatgttccaacatactggcatggttcagtgtgccttgttttatgcctgattgtacgcacgctttatcttattaaggaatccacatcctca 10038179  T
Q  845 tatcttgatgaccaagcaacgcacatatttgttcataatcagttgtatttttattcctaa 904  Q
    ||||||| |||||||||| ||| ||||| |||||| |||||||||| |||||||||||||    
T  10038180 tatcttgctgaccaagcaccgcgcatatctgttcagaatcagttgtgtttttattcctaa 10038239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 647 - 860
Target Start/End: Complemental strand, 24903013 - 24902800
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt-gccattactacaagat 745  Q
    |||||| |||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||| |||||||||||  | || | |||| |||| ||||    
T  24903013 tgttggatatttgtattggctgcattattggtaaaacaaatatccatgtttgtgatgttggatactatgttccaacatgttttaggcatttctacgagat 24902914  T
Q  746 gttggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatcttattaaggaatccacgttctcat 845  Q
    |||||||||||||||||||||||||| |||||||||| ||||||| ||||||| |    |||| | |  |||||||||||||| |||||||||| |||||    
T  24902913 gttggatatgatgttccaacatcctg-cacggttcagtgtgcctttttttatgcctgaatgtatgtgcactttatcttattaaagaatccacgtcctcat 24902815  T
Q  846 atcttgatgaccaag 860  Q
    |||||| ||||||||    
T  24902814 atcttgctgaccaag 24902800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 646 - 901
Target Start/End: Original strand, 26132206 - 26132449
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt-gccattactacaaga 744  Q
    ||||||||||||||||| || | |||||||| ||||||||||||||||| ||||||| |||||||| |||||||||||  | |  | |||  ||  ||||    
T  26132206 ttgttgggtatttgtatcgg-tacattattgctaaaacaaatatccatgtttgtgatattggatactatgttccaacatgtttcaggcatctctgtaaga 26132304  T
Q  745 tgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatcttattaaggaatccacgttctca 844  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||        ||    ||||||||| || |||||||||||||||| |||| ||| ||    
T  26132305 tgttggatatgatgttccaacatcctggcacggttcagtgtgcct--------gt----ttgtacgcgtgcgttatcttattaaggaaaccactttccca 26132392  T
Q  845 tatcttgatgaccaagcaacgcacatatttgttcataatcagttgtatttttattcc 901  Q
    ||||||| ||| |||||| ||||||||| ||  |||||||||||||| |||||||||    
T  26132393 tatcttgctgaacaagcatcgcacatatctgcacataatcagttgtacttttattcc 26132449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 741 - 904
Target Start/End: Complemental strand, 23960838 - 23960675
Alignment:
Q  741 aagatgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatcttattaaggaatccacgtt 840  Q
    ||||||||||||| ||||||||||||||||| |||| ||||| ||||||| ||||||| |   ||||||||| | ||||| |||||||||||||||||||    
T  23960838 aagatgttggatacgatgttccaacatcctggcacgattcagtgtgccttattttatgcctgattgtacgcgcgttttattttattaaggaatccacgtt 23960739  T
Q  841 ctcatatcttgatgaccaagcaacgcacatatttgttcataatcagttgtatttttattcctaa 904  Q
    ||||||||||| |||||||||||| | | ||| | | || ||||||||| | ||||||||||||    
T  23960738 ctcatatcttgctgaccaagcaacacgcttatctttacaaaatcagttgcacttttattcctaa 23960675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 743 - 904
Target Start/End: Complemental strand, 6046130 - 6045969
Alignment:
Q  743 gatgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatcttattaaggaatccacgttct 842  Q
    ||||||||||   ||||||||||||||||||||| |||| |||||||||||||||| | | || |||| | ||||||||||||||||||||||||||  |    
T  6046130 gatgttggatcatatgttccaacatcctgacacgattcaacgtgccttgttttatgccttattatacgtgcgctttatcttattaaggaatccacgtcgt 6046031  T
Q  843 catatcttgatgaccaagcaacgcacatatttgttcataatcagttgtatttttattcctaa 904  Q
    ||||||||| |||| ||||||||| ||||| | |||| ||||||||||  | ||||||||||    
T  6046030 catatcttggtgactaagcaacgcgcatatctattcagaatcagttgtggtgttattcctaa 6045969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 646 - 723
Target Start/End: Complemental strand, 10662010 - 10661933
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  10662010 ttgttgggtatttgtattggctgcattattgctaaaacaaatatccatgtttgtgatgttggatactatgttccaaca 10661933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 646 - 902
Target Start/End: Complemental strand, 10661772 - 10661514
Alignment:
Q  646 ttgttgggtatttg--tattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt-gccattactacaa 742  Q
    ||||||||||||||  |||||||| | || ||| ||||||||||| ||||  ||||||||||||||||||  ||||||||  | || | ||||  |  ||    
T  10661772 ttgttgggtatttgagtattggcttcgttgttgctaaaacaaatacccatt-ttgtgatgttggatacaagtttccaacatgttttaggcatttatgtaa 10661674  T
Q  743 gatgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatcttattaaggaatccacgttct 842  Q
    ||||||||||| ||||||||||||||||  |||||||||| ||||||  ||| ||| |   ||||||||| |  || ||||||||||||| || |||| |    
T  10661673 gatgttggatacgatgttccaacatcctagcacggttcagtgtgcctgatttcatgcctatttgtacgcgcgtcttttcttattaaggaaacctcgtttt 10661574  T
Q  843 catatcttgatgaccaagcaacgcacatatttgttcataatcagttgtatttttattcct 902  Q
    ||||||||| || ||||||||||| ||||| | | || |||||||||| || ||||||||    
T  10661573 catatcttggtggccaagcaacgcgcatatctatacagaatcagttgttttattattcct 10661514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 662 - 874
Target Start/End: Original strand, 7585816 - 7586017
Alignment:
Q  662 ttggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt-gccattactacaagatgttggatatgatgtt 760  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||| || ||||||||  | || | ||||  || ||||||  ||||||||||||    
T  7585816 ttggctgcattattgctaaaacaaatatccatgattgtgatgttggatactattttccaacatgttttaggcatttttataagatgcgggatatgatgtt 7585915  T
Q  761 ccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatcttattaaggaatccacgttctcatatcttgatgaccaag 860  Q
    ||||| |||||  ||||||||| ||||        ||||    ||||||| | ||||||||||||| |||||||||||| ||||||||||| | ||||||    
T  7585916 ccaacttcctggtacggttcagtgtgc--------atgt----ttgtacgtgcgctttatcttattgaggaatccacgtcctcatatcttgctaaccaag 7586003  T
Q  861 caacgcacatattt 874  Q
     ||| |||||||||    
T  7586004 aaacacacatattt 7586017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 669 - 792
Target Start/End: Complemental strand, 14927531 - 14927407
Alignment:
Q  669 cattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatat-tgccattactacaagatgttggatatgatgttccaacat 767  Q
    |||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||  | |  | |||  ||  ||||||||||||| |||||||||||||    
T  14927531 cattattgctaaaacaaatatccatgtttgtgttgttggatacaatgttccaacatgtttcagacatctctttaagatgttggatacgatgttccaacat 14927432  T
Q  768 cctgacacggttcagcgtgccttgt 792  Q
    |||| ||||||| || |||||||||    
T  14927431 cctggcacggtttagtgtgccttgt 14927407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 669 - 792
Target Start/End: Complemental strand, 15350997 - 15350873
Alignment:
Q  669 cattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatat-tgccattactacaagatgttggatatgatgttccaacat 767  Q
    |||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||  | |  | |||  ||  ||||||||||||| |||||||||||||    
T  15350997 cattattgctaaaacaaatatccatgtttgtgttgttggatacaatgttccaacatgtttcagacatctctttaagatgttggatacgatgttccaacat 15350898  T
Q  768 cctgacacggttcagcgtgccttgt 792  Q
    |||| ||||||| || |||||||||    
T  15350897 cctggcacggtttagtgtgccttgt 15350873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 647 - 779
Target Start/End: Complemental strand, 15507139 - 15507005
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgat-tgtgatgttggatacaatgttccaacaaatatt--gccattactacaag 743  Q
    ||||||||||||||||||||| |||| ||| |||||||||||||| |||| ||| | ||||||  |||||||||||||  | ||  | |||  ||| |||    
T  15507139 tgttgggtatttgtattggctgcattgttgctaaaacaaatatccttgatgtgt-aagttggaaccaatgttccaacatgtgtttaggcatctctataag 15507041  T
Q  744 atgttggatatgatgttccaacatcctgacacggtt 779  Q
    |||||||||| ||||||| |||||||||||||||||    
T  15507040 atgttggatacgatgttcaaacatcctgacacggtt 15507005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 741 - 904
Target Start/End: Complemental strand, 42637019 - 42636856
Alignment:
Q  741 aagatgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatcttattaaggaatccacgtt 840  Q
    ||||||||| ||| ||||||||||| ||||| |||||||||| ||| ||  ||| ||| |   ||||||||| |  || ||||||||||||| || ||||    
T  42637019 aagatgttgaatacgatgttccaacgtcctggcacggttcagtgtgtctgctttcatgcctatttgtacgcgcgtcttttcttattaaggaaacctcgtt 42636920  T
Q  841 ctcatatcttgatgaccaagcaacgcacatatttgttcataatcagttgtatttttattcctaa 904  Q
     |||||||||| || ||||||||||| ||||| | |  | |||||||||| || ||||||||||    
T  42636919 ttcatatcttggtggccaagcaacgcgcatatctatatagaatcagttgttttattattcctaa 42636856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 647 - 789
Target Start/End: Complemental strand, 20992453 - 20992308
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtg-atgttggatacaatgttccaacaaatatt--gccattactacaag 743  Q
    ||||||||||||||||||||| |||||||| |||||||||||||| || || || | ||||||  || ||||  ||||  | ||  | |||  ||  |||    
T  20992453 tgttgggtatttgtattggctgcattattgctaaaacaaatatccttgtttatgtaagttggaaccagtgttttaacatttgtttaggcatctctgtaag 20992354  T
Q  744 atgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||    
T  20992353 atgttggatatgatgttccaacatcctggcacggttcagtgtgcct 20992308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 646 - 723
Target Start/End: Complemental strand, 10280753 - 10280676
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    |||||||||||||||||||||| |||| ||| ||||| |||||||||||  |||| |||||||||| |||||| ||||    
T  10280753 ttgttgggtatttgtattggctgcattgttgctaaaataaatatccatgtctgtgttgttggatactatgttctaaca 10280676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 741 - 901
Target Start/End: Original strand, 20924453 - 20924614
Alignment:
Q  741 aagatgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatctta-ttaaggaatccacgt 839  Q
    ||||||||||||| ||||||||||||||||| || | ||||| ||||||||||| |||||   || | |||  || |||| ||| |||||||| |||  |    
T  20924453 aagatgttggatacgatgttccaacatcctggcaagattcagtgtgccttgtttcatgtctgtttatgcgcatgcgttatattatttaaggaaaccatat 20924552  T
Q  840 tctcatatcttgatgaccaagcaacgcacatatttgttcataatcagttgtatttttattcc 901  Q
    |  | ||||||| ||||||||| |||| ||||| ||| |||||||| ||||| |||||||||    
T  20924553 ttccttatcttgctgaccaagctacgcgcatatctgtacataatcaattgtacttttattcc 20924614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 647 - 787
Target Start/End: Complemental strand, 12326721 - 12326579
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgat-tgtgatgttggatacaatgttccaacaaatatt--gccattactacaag 743  Q
    ||||||||||||||||||||| |||||||| |||||||||||||| || | ||| | ||||||   || |||||||||  | ||  | |||  ||| |||    
T  12326721 tgttgggtatttgtattggctgcattattgctaaaacaaatatccttggtgtgt-aagttggaacaaaggttccaacatgtgtttaggcatctctataag 12326623  T
Q  744 atgttggatatgatgttccaacatcctgacacggttcagcgtgc 787  Q
    |||||||||| ||||||||||||||||| |||||||||| ||||    
T  12326622 atgttggatacgatgttccaacatcctggcacggttcagtgtgc 12326579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 741 - 789
Target Start/End: Original strand, 16207227 - 16207275
Alignment:
Q  741 aagatgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    ||||||||||||||||||||||||||||||| || ||||||| ||||||    
T  16207227 aagatgttggatatgatgttccaacatcctggcatggttcagtgtgcct 16207275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 654 - 723
Target Start/End: Complemental strand, 6046176 - 6046107
Alignment:
Q  654 tatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    |||||||||||||| || |||||  ||||||||||| ||||||| |||||||||||   |||||||||||    
T  6046176 tatttgtattggctgcactattgcgaaaacaaatattcatgattatgatgttggatcatatgttccaaca 6046107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 646 - 691
Target Start/End: Complemental strand, 14166070 - 14166025
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatcc 691  Q
    |||||||||||||||||||||| |||||||| ||||| ||||||||    
T  14166070 ttgttgggtatttgtattggctacattattgctaaaaaaaatatcc 14166025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 744 - 792
Target Start/End: Complemental strand, 10280654 - 10280606
Alignment:
Q  744 atgttggatatgatgttccaacatcctgacacggttcagcgtgccttgt 792  Q
    |||||||||| ||| ||||||||||||| |||||||||| |||||||||    
T  10280654 atgttggatacgatattccaacatcctgccacggttcagtgtgccttgt 10280606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 646 - 690
Target Start/End: Original strand, 11520660 - 11520704
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatc 690  Q
    |||||||||||||||||||||| |||| ||| |||||||||||||    
T  11520660 ttgttgggtatttgtattggctgcattgttgctaaaacaaatatc 11520704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 646 - 691
Target Start/End: Complemental strand, 646042 - 645997
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatcc 691  Q
    |||||||||||||||||||| | |||| ||| ||||||||||||||    
T  646042 ttgttgggtatttgtattggttgcattgttgctaaaacaaatatcc 645997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 646 - 691
Target Start/End: Complemental strand, 3801915 - 3801870
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatcc 691  Q
    ||||||| |||||||||||||| |||| ||| ||||||||||||||    
T  3801915 ttgttggctatttgtattggctgcattgttgctaaaacaaatatcc 3801870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 647 - 700
Target Start/End: Original strand, 20924358 - 20924411
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtg 700  Q
    |||||| ||||||||||| || |||| |||||||||||||||| |||| |||||    
T  20924358 tgttggatatttgtattgtctgcattgttgttaaaacaaatattcatgtttgtg 20924411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 742 - 791
Target Start/End: Original strand, 23579313 - 23579362
Alignment:
Q  742 agatgttggatatgatgttccaacatcctgacacggttcagcgtgccttg 791  Q
    |||||||||| ||| |||||||||||||||||  ||||||| ||||||||    
T  23579313 agatgttggaaatgttgttccaacatcctgacgaggttcagtgtgccttg 23579362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 134; Significance: 3e-69; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 640 - 904
Target Start/End: Original strand, 20254121 - 20254386
Alignment:
Q  640 ctcaagttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt-gccattact 738  Q
    ||||| |||||||||||||| ||||||| ||| |||| ||||| |||||||||||||||||||||||||||| |||||||||||  | || | |||| ||    
T  20254121 ctcaaattgttgggtatttgcattggctacatcattgctaaaataaatatccatgattgtgatgttggatactatgttccaacatgttttaggcattcct 20254220  T
Q  739 acaagatgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatcttattaaggaatccacg 838  Q
       | ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| | |  |||||||| | |||||||||||||||||||||||    
T  20254221 gtgaaatgttggatatgatgttccaacatcctgacacggttcagtgtgcctttttttatgccttaatgtacgcgcgttttatcttattaaggaatccacg 20254320  T
Q  839 ttctcatatcttgatgaccaagcaacgcacatatttgttcataatcagttgtatttttattcctaa 904  Q
    | ||||||||||| |||||||||||||| ||||| |||||| ||||||||||  ||||||||||||    
T  20254321 tcctcatatcttgttgaccaagcaacgcgcatatctgttcaaaatcagttgtggttttattcctaa 20254386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 646 - 904
Target Start/End: Complemental strand, 9997407 - 9997147
Alignment:
Q  646 ttgttgggtatttg--tattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt-gccattactacaa 742  Q
    ||||||||||||||  |||||||| |||| ||| ||||||||||| ||||| ||||||||||||||||||  || |||||  | || | |||| ||  ||    
T  9997407 ttgttgggtatttgagtattggcttcattgttgctaaaacaaatacccatgtttgtgatgttggatacaagttttcaacatgttttaggcatttctgtaa 9997308  T
Q  743 gatgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatcttattaaggaatccacgttct 842  Q
    ||||||||||| ||||||| | |||  || |||||||||| ||||||  ||| ||| |   ||||||||| |  || ||||||||||||| || |||| |    
T  9997307 gatgttggatacgatgttcta-cattttggcacggttcagtgtgcctgatttcatgcctatttgtacgcgcgtcttttcttattaaggaaacctcgtttt 9997209  T
Q  843 catatcttgatgaccaagcaacgcacatatttgttcataatcagttgtatttttattcctaa 904  Q
    ||||||||| |||||||||||||| ||||| ||| ||||||||||||| || ||||||||||    
T  9997208 catatcttggtgaccaagcaacgcgcatatctgtacataatcagttgttttattattcctaa 9997147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 647 - 723
Target Start/End: Complemental strand, 9997632 - 9997556
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    ||||||||||||||||||||| |||||||| |||||||||||| |||| |||| ||||||||||| |||||||||||    
T  9997632 tgttgggtatttgtattggctgcattattgctaaaacaaatattcatgtttgtaatgttggatactatgttccaaca 9997556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 646 - 789
Target Start/End: Original strand, 27924701 - 27924847
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtg-atgttggatacaatgttccaacaaatatt--gccattactacaa 742  Q
    |||||| ||||||||| ||||| |||||||| | |||||||||||| |||||||| | ||||||  |||||||||||||  | ||  | |||| ||  ||    
T  27924701 ttgttgagtatttgtagtggctgcattattgctgaaacaaatatccttgattgtgtaagttggaaccaatgttccaacatgtgtttaggcatttctgtaa 27924800  T
Q  743 gatgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    ||||||||||| |||||||||||||||||||||| ||||| ||||||    
T  27924801 gatgttggataagatgttccaacatcctgacacgattcagtgtgcct 27924847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 647 - 794
Target Start/End: Complemental strand, 18622566 - 18622421
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt-gccattactacaagat 745  Q
    ||||||||||||||||||| | |||||||| |||||||||||| | || |||||   |||||||| |||||||||||  | |  | |||  ||  |||||    
T  18622566 tgttgggtatttgtattggttgcattattgctaaaacaaatattcttgtttgtg---ttggatactatgttccaacatgtttcagacatctctgtaagat 18622470  T
Q  746 gttggatatgatgttccaacatcctgacacggttcagcgtgccttgttt 794  Q
    |||||||| |||||||||||||| || |||||||||| |||||||||||    
T  18622469 gttggatacgatgttccaacatcttggcacggttcagtgtgccttgttt 18622421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 646 - 782
Target Start/End: Complemental strand, 33977966 - 33977831
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt--gccattactacaag 743  Q
    |||||| ||||||||||||||| |||||||| ||||| ||||||   |  ||||| |||||||  |||||||||||||  ||||  | |||  ||  |||    
T  33977966 ttgttgagtatttgtattggctgcattattgctaaaataaatat---tatttgtgttgttggaaccaatgttccaacatgtatttaggcatctctgtaag 33977870  T
Q  744 atgttggatatgatgttccaacatcctgacacggttcag 782  Q
    ||||||||||| |||||||||||||||||||| ||||||    
T  33977869 atgttggatattatgttccaacatcctgacacagttcag 33977831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 646 - 789
Target Start/End: Complemental strand, 33962640 - 33962498
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt--gccattactacaag 743  Q
    |||||| ||||||||||||||| |||||||| ||||| ||||||   |  ||||| |||||||  |||||||||||||  ||||  | |||  ||  |||    
T  33962640 ttgttgagtatttgtattggctgcattattgctaaaataaatat---tatttgtgttgttggaaccaatgttccaacatgtatttaggcatctctgtaag 33962544  T
Q  744 atgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    ||||||||||| |||||||||||||||| ||| |||||| ||||||    
T  33962543 atgttggatattatgttccaacatcctggcacagttcagtgtgcct 33962498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 647 - 782
Target Start/End: Complemental strand, 26537196 - 26537059
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt--gccattactacaaga 744  Q
    ||||||||||||||||| | | ||||||||||||||||||||||| || ||||| |||| ||  |||| ||| ||||  | ||  | |||  |   ||||    
T  26537196 tgttgggtatttgtattagttgcattattgttaaaacaaatatccttgtttgtgttgttagaaccaatcttctaacatgtgtttaggcatatccgtaaga 26537097  T
Q  745 tgttggatatgatgttccaacatcctgacacggttcag 782  Q
    |||||||||||||||||||||||| || ||||||||||    
T  26537096 tgttggatatgatgttccaacatcatggcacggttcag 26537059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 742 - 779
Target Start/End: Complemental strand, 45136922 - 45136885
Alignment:
Q  742 agatgttggatatgatgttccaacatcctgacacggtt 779  Q
    ||||||||||||||||||||||||||||||||||||||    
T  45136922 agatgttggatatgatgttccaacatcctgacacggtt 45136885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 651 - 798
Target Start/End: Original strand, 23540661 - 23540810
Alignment:
Q  651 gggtatttgtattggctccattattgttaaaacaaatatccatgat-tgtgatgttggatacaatgttccaacaaatatt--gccattactacaagatgt 747  Q
    ||||||||||||||||| ||||||||  ||||||||||||| |||| ||| | ||||||  |||||||||||||  | ||  | |||  ||  ||||||     
T  23540661 gggtatttgtattggctgcattattgcgaaaacaaatatccttgatgtgt-aagttggaaccaatgttccaacatgtgtttaggcatctctgtaagatga 23540759  T
Q  748 tggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatg 798  Q
    |||||| ||||||||||||||||| ||| ||| || |||||| | ||||||    
T  23540760 tggatacgatgttccaacatcctggcacagtttagtgtgcctgggtttatg 23540810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 123; Significance: 1e-62; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 647 - 904
Target Start/End: Original strand, 41330633 - 41330891
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt-gccattactacaagat 745  Q
    |||| ||||||||||||| || |||| ||| |||||||||||||||||||| ||||||| ||||| ||||||||||   | || | ||||   |||||||    
T  41330633 tgttaggtatttgtattgactgcattgttgctaaaacaaatatccatgattttgatgttcgataccatgttccaacgtgttttaggcattttcacaagat 41330732  T
Q  746 gttggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatcttattaaggaatccacgttctcat 845  Q
     |||||| |||||||||||||||||  |||||||||| ||||||||||||||| |   ||||||||| |||||||||||||||||||||||||| |||||    
T  41330733 tttggatgtgatgttccaacatcctatcacggttcagtgtgccttgttttatgcctgattgtacgcgcgctttatcttattaaggaatccacgtcctcat 41330832  T
Q  846 atcttgatgaccaagcaacgcacatatttgttcataatcagttgtatttttattcctaa 904  Q
    ||||||||||||||||||||| | |||||||||| ||||||||||  ||||||||||||    
T  41330833 atcttgatgaccaagcaacgcgcgtatttgttcagaatcagttgtggttttattcctaa 41330891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 647 - 865
Target Start/End: Original strand, 10339410 - 10339629
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt-gccattactacaagat 745  Q
    ||||||||||||||||||||| |||||||| ||||| ||||||||||||||| |||||||||||| |||||||||||  | || | |||| ||  |||||    
T  10339410 tgttgggtatttgtattggctgcattattgctaaaataaatatccatgattgcgatgttggatactatgttccaacatgttttaggcatttctgtaagat 10339509  T
Q  746 gttggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatcttattaaggaatccacgttctcat 845  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||   |||||||||  ||||||||| |||||||||||| ||||||||    
T  10339510 gttggatacgatgttccaacatcttgacacggttcagtgtgccttgttttatgtctgattgtacgcgcactttatctttttaaggaatccatgttctcat 10339609  T
Q  846 atcttgatgaccaagcaacg 865  Q
    |||||| ||||||| |||||    
T  10339610 atcttgctgaccaaacaacg 10339629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 642 - 901
Target Start/End: Complemental strand, 1626486 - 1626225
Alignment:
Q  642 caagttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatattgc-cattactac 740  Q
    |||| |||| |||||||||||||||| |||||||| |||||||||||||| || || || ||||||||||||| ||||||||  | ||   |||| ||      
T  1626486 caagatgttaggtatttgtattggctgcattattgctaaaacaaatatccttgtttatgttgttggatacaatattccaacatgttttatgcatttctgt 1626387  T
Q  741 aagatgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatc-ttattaaggaatccacgt 839  Q
    |||||||||||||||||||||||||||||||  || |||||| |||||| |||| ||| |   ||||||||| |||||||| || |||||||| |||| |    
T  1626386 aagatgttggatatgatgttccaacatcctggaacagttcagtgtgcctggtttcatgcctacttgtacgcgcgctttatcttttttaaggaaaccactt 1626287  T
Q  840 tctcatatcttgatgaccaagcaacgcacatatttgttcataatcagttgtatttttattcc 901  Q
    || ||||||||| |||||||||||||| ||||| | | || ||||||||||  |||||||||    
T  1626286 tcccatatcttgctgaccaagcaacgcgcatatctatacaaaatcagttgtgcttttattcc 1626225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 646 - 789
Target Start/End: Original strand, 25349479 - 25349623
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt-gccattactacaaga 744  Q
    ||||||| ||||| ||||| || |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  | || | ||||  |  ||||    
T  25349479 ttgttggctatttatattgactgcattattgttaaaacaaatatccatgtttgtgttgttggatacaatgttccaacatgttttaggcatttatgtaaga 25349578  T
Q  745 tgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    ||||||||||||| ||||||||||||| || ||||||| ||||||    
T  25349579 tgttggatatgatattccaacatcctggcatggttcagtgtgcct 25349623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 647 - 789
Target Start/End: Original strand, 20840514 - 20840658
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtg-atgttggatacaatgttccaacaaatatt--gccattactacaag 743  Q
    ||||||||||||||||||||| |||| ||| |||||||||||||| |||| ||| | ||||||  ||||||||||||| || ||  | |||  ||  |||    
T  20840514 tgttgggtatttgtattggctgcattgttgctaaaacaaatatccttgat-gtgtaagttggaaccaatgttccaacatatgtttaggcatctctgtaag 20840612  T
Q  744 atgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    |||||||||| ||||||||||||||||||||| |||||| ||||||    
T  20840613 atgttggatacgatgttccaacatcctgacacagttcagtgtgcct 20840658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 646 - 722
Target Start/End: Original strand, 15803464 - 15803540
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaac 722  Q
    |||||||||||||| ||||||| |||||||| |||||||||||| |||| ||||| |||||||||| ||||||||||    
T  15803464 ttgttgggtatttgcattggctgcattattgctaaaacaaatattcatgtttgtgttgttggatacgatgttccaac 15803540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 647 - 723
Target Start/End: Original strand, 47940113 - 47940189
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    |||||||||||| ||||||||   |||||||||||||||||||||||  |||||||||||||||| |||||||||||    
T  47940113 tgttgggtatttatattggctgtgttattgttaaaacaaatatccatatttgtgatgttggatactatgttccaaca 47940189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 646 - 711
Target Start/End: Original strand, 17838229 - 17838294
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatac 711  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||| ||||| ||||||||||    
T  17838229 ttgttgggtatttgtattggctgcattattgctaaaacaaatattcatgtttgtgttgttggatac 17838294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 743 - 838
Target Start/End: Complemental strand, 8282731 - 8282635
Alignment:
Q  743 gatgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttt-tatgtcatgttgtacgcgggctttatcttattaaggaatccacg 838  Q
    ||||||||||| ||||||||||||||||||||| |||||| | ||||||||| | || | |||| ||| || |||||||||||| ||||||||||||    
T  8282731 gatgttggatacgatgttccaacatcctgacacagttcagtgagccttgtttatgtgccttgttttacccgcgctttatcttatcaaggaatccacg 8282635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 647 - 723
Target Start/End: Complemental strand, 12759375 - 12759299
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    |||||| |||||||||| | | |||||||| ||||||||||||||||| |||||||||||||||  |||||||||||    
T  12759375 tgttggttatttgtattagttgcattattgctaaaacaaatatccatgtttgtgatgttggatattatgttccaaca 12759299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 647 - 782
Target Start/End: Complemental strand, 24986892 - 24986755
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt--gccattactacaaga 744  Q
    |||||||||||||||||| || |||||||| ||||| |||||||| ||| |||| |||||||  |||||||||||||  | ||  | |||  ||  ||||    
T  24986892 tgttgggtatttgtattgactgcattattgctaaaataaatatccttgactgtgttgttggaaccaatgttccaacatgtgtttaggcatctctgtaaga 24986793  T
Q  745 tgttggatatgatgttccaacatcctgacacggttcag 782  Q
    |||||||||  |||||||||||| ||| ||||||||||    
T  24986792 tgttggatacaatgttccaacattctggcacggttcag 24986755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 646 - 723
Target Start/End: Original strand, 11667152 - 11667229
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    ||||||||||||||||||| ||||||| ||| | |||||||||||| || ||||| |||||||  |||||||||||||    
T  11667152 ttgttgggtatttgtattgactccattgttgattaaacaaatatccttgtttgtgttgttggaaccaatgttccaaca 11667229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 646 - 782
Target Start/End: Original strand, 20200338 - 20200476
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgt-gatgttggatacaatgttccaacaaatatt--gccattactacaa 742  Q
    |||||||||||||||||||||| |||| ||| |||||||||||||| || ||||  | ||||||  |||||||||||||  | ||  | |||  ||  ||    
T  20200338 ttgttgggtatttgtattggctgcattgttgctaaaacaaatatccttg-ttgtataagttggaaccaatgttccaacatgtgtttaggcatctctgtaa 20200436  T
Q  743 gatgttggatatgatgttccaacatcctgacacggttcag 782  Q
    ||||||||||| ||||||||||||||||| ||||||||||    
T  20200437 gatgttggatacgatgttccaacatcctggcacggttcag 20200476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 752 - 838
Target Start/End: Original strand, 15914801 - 15914888
Alignment:
Q  752 tatgatgttccaacatcctgacacggttcagcgtgccttgttt-tatgtcatgttgtacgcgggctttatcttattaaggaatccacg 838  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||| | ||||  ||||||| |  |||||||||||||||||||| ||||    
T  15914801 tatgatgttgcaacatcttgacacggttcagtgtgccttgtttatgtgtctagttgtacacacgctttatcttattaaggaattcacg 15914888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 646 - 723
Target Start/End: Complemental strand, 4246950 - 4246873
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    |||||||||||||||||||||| |||| ||| |||||||||||||| ||  |||| |||||||  ||||||| |||||    
T  4246950 ttgttgggtatttgtattggctgcattgttgctaaaacaaatatccttgtatgtgttgttggaaccaatgtttcaaca 4246873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 646 - 723
Target Start/End: Original strand, 23477186 - 23477263
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    |||| ||||||||||||||||| |||| ||| |||||||||||| |||   |||| |||||||||| |||||||||||    
T  23477186 ttgtcgggtatttgtattggctgcattgttgctaaaacaaatattcatatatgtgttgttggatactatgttccaaca 23477263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 743 - 839
Target Start/End: Original strand, 51471439 - 51471536
Alignment:
Q  743 gatgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttt-tatgtcatgttgtacgcgggctttatcttattaaggaatccacgt 839  Q
    |||||||||||||| |||||||||||||| |||||||||| ||||| ||||| | || | || | | | || ||||||||||||||||||| ||||||    
T  51471439 gatgttggatatgaagttccaacatcctggcacggttcagtgtgccctgtttgtgtggcttgattttcacgcgctttatcttattaaggaaaccacgt 51471536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 743 - 789
Target Start/End: Complemental strand, 12753871 - 12753825
Alignment:
Q  743 gatgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    ||||||||||| ||||||||||||||||| |||||||||| ||||||    
T  12753871 gatgttggatacgatgttccaacatcctggcacggttcagtgtgcct 12753825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 647 - 691
Target Start/End: Complemental strand, 13166303 - 13166259
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatcc 691  Q
    ||||||||||||||||||||| |||| ||| ||||||||||||||    
T  13166303 tgttgggtatttgtattggctgcattgttgctaaaacaaatatcc 13166259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 816 - 904
Target Start/End: Original strand, 25349626 - 25349712
Alignment:
Q  816 tttatcttattaaggaatccacgttctcatatcttgatgaccaagcaacgcacatatttgttcataatcagttgtatttttattcctaa 904  Q
    ||||||||||||||||||||| |||| ||||||||| || ||||||||| | ||||| ||||||  |||| ||||  ||||||||||||    
T  25349626 tttatcttattaaggaatccaagttc-catatcttgttgtccaagcaacacgcatatctgttcagcatcaattgt-gttttattcctaa 25349712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 741 - 789
Target Start/End: Original strand, 26971744 - 26971792
Alignment:
Q  741 aagatgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    ||||||||||||| |||| |||||||||||| |||||||||| ||||||    
T  26971744 aagatgttggatacgatgctccaacatcctggcacggttcagtgtgcct 26971792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 741 - 890
Target Start/End: Original strand, 17850773 - 17850923
Alignment:
Q  741 aagatgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatctta-ttaaggaatccacgt 839  Q
    ||||| |||||||  ||||||||||||||| ||||||||||| |||||||  || |||| |  |||| || | ||||||| ||| |||||||| |||  |    
T  17850773 aagattttggatacaatgttccaacatcctaacacggttcagtgtgccttagttcatgttagtttgtgcgtgcgctttatattatttaaggaaaccatat 17850872  T
Q  840 tctcatatcttgatgaccaagcaacgcacatatttgttcataatcagttgt 890  Q
    |  | ||||||  |||||||||||||| ||||| | | || ||||||||||    
T  17850873 ttccttatcttattgaccaagcaacgcccatatctttacagaatcagttgt 17850923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 646 - 691
Target Start/End: Original strand, 22891092 - 22891137
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatcc 691  Q
    |||||||||||||||||||||| |||| ||| ||||| ||||||||    
T  22891092 ttgttgggtatttgtattggctgcattgttgctaaaataaatatcc 22891137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 120; Significance: 7e-61; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 647 - 889
Target Start/End: Original strand, 26964805 - 26965047
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatattgccattact-acaagat 745  Q
    ||||||||||||||||||||| |||| ||| |||||||||||||||||  | ||||||||||||| |||||||||||  | |||  | |  | || ||||    
T  26964805 tgttgggtatttgtattggctgcattgttgctaaaacaaatatccatgtgt-tgatgttggatactatgttccaacatgttttggaaattttcacgagat 26964903  T
Q  746 gttggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatcttattaaggaatccacgttctcat 845  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||| | ||||| | | |||||||||||||||||||||||||| |||||    
T  26964904 gttggatatgatgttccaacattctgacacggttcagtgtgccttgttttatgtcttattgtatgtgcgctttatcttattaaggaatccacgtcctcat 26965003  T
Q  846 atcttgatgaccaagcaacgcacatatttgttcataatcagttg 889  Q
    |||||| |||||||||||||| ||||| |||||| |||||||||    
T  26965004 atcttgctgaccaagcaacgcgcatatctgttcagaatcagttg 26965047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 647 - 904
Target Start/End: Complemental strand, 24564622 - 24564364
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt-gccattactacaagat 745  Q
    |||||| |||||||||||||| |||| ||| ||||| |||||||||||||| ||||||||||||| |||||||||||  | || | ||||   ||| |||    
T  24564622 tgttggatatttgtattggctgcatttttgctaaaataaatatccatgattatgatgttggataccatgttccaacatgttttaggcattttcacaggat 24564523  T
Q  746 gttggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatcttattaaggaatccacgttctcat 845  Q
    ||||||| |||||||| || |||||  |||| ||||| ||||||||||||||| |   ||||||||| |||||||||||||||||||||||| | |||||    
T  24564522 gttggatgtgatgttcaaatatcctagcacgattcagtgtgccttgttttatgcctgattgtacgcgcgctttatcttattaaggaatccacatcctcat 24564423  T
Q  846 atcttgatgaccaagcaacgcacatatttgttcataatcagttgtatttttattcctaa 904  Q
    |||||| |||||||||||||| ||||| |||| | ||||||| ||  |||| |||||||    
T  24564422 atcttgctgaccaagcaacgcgcatatctgttaagaatcagtggtggttttcttcctaa 24564364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 652 - 888
Target Start/End: Complemental strand, 19598574 - 19598347
Alignment:
Q  652 ggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatattgccattactacaagatgttgga 751  Q
    |||||||| ||||||| |||||||| ||||||||||||||||| |||||||||||||||| ||||| ||         | |||  ||  |||||||||||    
T  19598574 ggtatttgaattggctgcattattgctaaaacaaatatccatgtttgtgatgttggatactatgtttca---------ggcatctctgtaagatgttgga 19598484  T
Q  752 tatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatcttattaaggaatccacgttctcatatcttg 851  Q
    || |||||||||||||||||||||||||||| ||||||||||| ||| |   |||||| ||  |||||| |||||||||||||||||| |||||||||||    
T  19598483 tacgatgttccaacatcctgacacggttcagtgtgccttgtttcatgcctgtttgtacacgcactttattttattaaggaatccacgtcctcatatcttg 19598384  T
Q  852 atgaccaagcaacgcacatatttgttcataatcagtt 888  Q
     | |||||||||||||||||| ||| || ||||||||    
T  19598383 ctaaccaagcaacgcacatatctgtacagaatcagtt 19598347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 743 - 904
Target Start/End: Complemental strand, 11961280 - 11961119
Alignment:
Q  743 gatgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatcttattaaggaatccacgttct 842  Q
    ||||||||||| ||||||||||||||||| ||||||| || ||| |||||| |||| |   ||||| | | |||||||||||||||||||| ||||||||    
T  11961280 gatgttggatacgatgttccaacatcctggcacggtttagtgtgtcttgttctatgcctgattgtaagtgtgctttatcttattaaggaattcacgttct 11961181  T
Q  843 catatcttgatgaccaagcaacgcacatatttgttcataatcagttgtatttttattcctaa 904  Q
    ||||||||| |||||||||||||| ||||| ||| |||||| ||||||  ||||||||||||    
T  11961180 catatcttgctgaccaagcaacgcgcatatctgtacataattagttgtgcttttattcctaa 11961119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 652 - 904
Target Start/End: Complemental strand, 19658821 - 19658565
Alignment:
Q  652 ggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt-gccattactacaagatgttgg 750  Q
    |||||||||||||||| |||||||| ||  ||||| || ||||  | ||||||||| ||| |||||||||||  | || | ||||   || |||||||||    
T  19658821 ggtatttgtattggctgcattattgctaggacaaaaattcatgtgt-tgatgttggttactatgttccaacatgttttaggcattttcacgagatgttgg 19658723  T
Q  751 atatgatgttccaacatcctgacacggttcagcgtgccttgttttatgt----catgttgtacgcgggctttatcttattaaggaatccacgttctcata 846  Q
    ||||||||||||||||||||  |||| ||||| ||||||| ||||||      | ||||||| | | |||||||||||||||||||||||||| ||||||    
T  19658722 atatgatgttccaacatcctagcacgattcagtgtgccttattttattaattccttgttgtatgtgtgctttatcttattaaggaatccacgtcctcata 19658623  T
Q  847 tcttgatgaccaagcaacgcacatatttgttcataatcagttgtatttttattcctaa 904  Q
    ||||| |||||||||||||  ||| |||||||| |||||||| |  ||||||||||||    
T  19658622 tcttgttgaccaagcaacgtgcatttttgttcagaatcagttatggttttattcctaa 19658565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 646 - 888
Target Start/End: Original strand, 15930098 - 15930342
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatat-tgccattactacaaga 744  Q
    |||||||||||||||||||||| |  ||||| |||||||||||| |||| ||||| |||| |||||||||||| ||||  | |  | |||  ||  ||||    
T  15930098 ttgttgggtatttgtattggctgctatattgctaaaacaaatattcatgtttgtgttgtttgatacaatgttcaaacatgtttcaggcatctctgtaaga 15930197  T
Q  745 tgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatg-ttgtacgcgggctttat-cttattaaggaatccacgttct 842  Q
    | ||||||| ||||||||||||||||| |||||||||| ||||||||||| ||| |||| |||||| || || |||| ||  |||||||| |||  ||      
T  15930198 tattggatacgatgttccaacatcctggcacggttcagtgtgccttgtttcatg-catgtttgtacacgcgccttatactatttaaggaaaccatatttc 15930296  T
Q  843 catatcttgatgaccaagcaacgcacatatttgttcataatcagtt 888  Q
    | ||||||  |||||||||||||||||||| | | |||||||||||    
T  15930297 cttatcttattgaccaagcaacgcacatatctttacataatcagtt 15930342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 646 - 789
Target Start/End: Original strand, 12385108 - 12385252
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt-gccattactacaaga 744  Q
    |||||||||||||||||||||| |||||||| |||||||||||||  || ||||  | ||||| ||||||||||||||  | || | |||  ||  ||||    
T  12385108 ttgttgggtatttgtattggctgcattattgctaaaacaaatatcattgtttgtattattggagacaatgttccaacatgttttaggcatctctgtaaga 12385207  T
Q  745 tgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    ||||||||| ||||||||||||||||| |||||||||| ||||||    
T  12385208 tgttggatacgatgttccaacatcctggcacggttcagtgtgcct 12385252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 647 - 789
Target Start/End: Complemental strand, 13196233 - 13196089
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt--gccattactacaaga 744  Q
    ||||||||||||||||||||| |||||||| |||||||||||||| || ||   | ||||||  |||||||||||||  | ||  | |||  ||| ||||    
T  13196233 tgttgggtatttgtattggctgcattattgctaaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttagacatctctataaga 13196134  T
Q  745 tgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    ||||||||| ||||||||||||||||| |||||||||| ||||||    
T  13196133 tgttggatacgatgttccaacatcctggcacggttcagtgtgcct 13196089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 647 - 723
Target Start/End: Complemental strand, 11961333 - 11961257
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    ||||||||||||||||||| | |||||||||||||| ||||||| ||| |||||||||||||||| |||||||||||    
T  11961333 tgttgggtatttgtattggttgcattattgttaaaataaatatctatgtttgtgatgttggatacgatgttccaaca 11961257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 647 - 723
Target Start/End: Original strand, 17868220 - 17868296
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    ||||||||||||||||||| | |||||||| ||||| ||||||||||| || || ||||||||||||||||||||||    
T  17868220 tgttgggtatttgtattggttgcattattgctaaaataaatatccatgtttatgttgttggatacaatgttccaaca 17868296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 647 - 723
Target Start/End: Original strand, 17878003 - 17878079
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    ||||||||||||||||||| | |||||||| ||||| ||||||||||| || || ||||||||||||||||||||||    
T  17878003 tgttgggtatttgtattggttgcattattgctaaaataaatatccatgtttatgttgttggatacaatgttccaaca 17878079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 741 - 872
Target Start/End: Original strand, 23882044 - 23882176
Alignment:
Q  741 aagatgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatctta-ttaaggaatccacgt 839  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||| |   |||||| || ||||||| ||| |||||||| |||  |    
T  23882044 aagatgttggatacgatgttccaacatcctgacacggttcagtgtgccttgtttcatgcctgtttgtacacgtgctttatattatttaaggaaaccatat 23882143  T
Q  840 tctcatatcttgatgaccaagcaacgcacatat 872  Q
    |  | ||||||  |||||||||||||| |||||    
T  23882144 ttccttatcttattgaccaagcaacgcgcatat 23882176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 650 - 721
Target Start/End: Original strand, 3566104 - 3566175
Alignment:
Q  650 tgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaa 721  Q
    |||||||||||||||||| |||||||| ||| ||||||||||||| |||||||||| ||||| |||||||||    
T  3566104 tgggtatttgtattggctgcattattgctaatacaaatatccatgtttgtgatgttcgatactatgttccaa 3566175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 648 - 723
Target Start/End: Complemental strand, 24542744 - 24542669
Alignment:
Q  648 gttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    |||| |||||||||||| || |||||||| ||||||||||||||||| ||||||||||||||||  ||||||||||    
T  24542744 gttgagtatttgtattgactgcattattgctaaaacaaatatccatgtttgtgatgttggatactttgttccaaca 24542669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 745 - 864
Target Start/End: Original strand, 17868275 - 17868394
Alignment:
Q  745 tgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatcttattaaggaatccacgttctca 844  Q
    |||||||||  ||||||||||||| ||||||||||||| |||||| |||| ||| |   |||||||||  ||||||||| |||||||| |||| ||  ||    
T  17868275 tgttggatacaatgttccaacatcgtgacacggttcagtgtgcctggtttcatgcctacttgtacgcgcactttatctttttaaggaaaccacttttcca 17868374  T
Q  845 tatcttgatgaccaagcaac 864  Q
    ||||||| | ||||||||||    
T  17868375 tatcttgctaaccaagcaac 17868394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 745 - 864
Target Start/End: Original strand, 17878058 - 17878177
Alignment:
Q  745 tgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatcttattaaggaatccacgttctca 844  Q
    |||||||||  ||||||||||||| ||||||||||||| |||||| |||| ||| |   |||||||||  ||||||||| |||||||| |||| ||  ||    
T  17878058 tgttggatacaatgttccaacatcgtgacacggttcagtgtgcctggtttcatgcctacttgtacgcgcactttatctttttaaggaaaccacttttcca 17878157  T
Q  845 tatcttgatgaccaagcaac 864  Q
    ||||||| | ||||||||||    
T  17878158 tatcttgctaaccaagcaac 17878177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 647 - 723
Target Start/End: Original strand, 29252929 - 29253005
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    |||||||||||| ||||| ||  ||| ||| ||||||||||||||||| |||||||||||||  |||||||||||||    
T  29252929 tgttgggtatttatattgactgtattgttgctaaaacaaatatccatgtttgtgatgttggaaccaatgttccaaca 29253005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 646 - 723
Target Start/End: Original strand, 21316889 - 21316964
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    |||||||||||||||||||||| |||||||| |||||||||||| | ||  | ||||||||||||  |||||||||||    
T  21316889 ttgttgggtatttgtattggcttcattattgctaaaacaaatattcttg--tatgatgttggatatgatgttccaaca 21316964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 650 - 699
Target Start/End: Original strand, 23880944 - 23880993
Alignment:
Q  650 tgggtatttgtattggctccattattgttaaaacaaatatccatgattgt 699  Q
    |||||||||||||||||| |||||||| ||||||||||||||||| ||||    
T  23880944 tgggtatttgtattggctgcattattgctaaaacaaatatccatgtttgt 23880993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 647 - 723
Target Start/End: Original strand, 17863724 - 17863800
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    ||||| |||||| |||||||| |||| ||| |||||||||||||| || ||||| |||||||  |||||||||||||    
T  17863724 tgttgtgtatttctattggctgcattgttgctaaaacaaatatccttgtttgtgttgttggaaccaatgttccaaca 17863800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 741 - 789
Target Start/End: Complemental strand, 33666604 - 33666556
Alignment:
Q  741 aagatgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    |||||||||||||||||| |||||||||||| |||||||||| ||||||    
T  33666604 aagatgttggatatgatgctccaacatcctggcacggttcagtgtgcct 33666556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 744 - 794
Target Start/End: Original strand, 34639555 - 34639605
Alignment:
Q  744 atgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttt 794  Q
    |||||||||| |||||||||||||| || |||||||||| |||||||||||    
T  34639555 atgttggatacgatgttccaacatcttggcacggttcagtgtgccttgttt 34639605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 647 - 723
Target Start/End: Original strand, 8464917 - 8464993
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtg-atgttggatacaatgttccaaca 723  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||| || ||||| | ||||||  |||||||||||||    
T  8464917 tgttgggtatttgtattggctgcattattgctaaaataaatatccttg-ttgtgtaagttggaaccaatgttccaaca 8464993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 650 - 770
Target Start/End: Original strand, 20465165 - 20465288
Alignment:
Q  650 tgggtatttgtattggctccattattgttaaaacaaatatccatgattgtg-atgttggatacaat-gttccaacaaatatt--gccattactacaagat 745  Q
    ||||||||||||||| || ||||||||  ||||||||||||| ||| |||| | |||||| ||||| |||||||||  | ||  | |||  ||| |||||    
T  20465165 tgggtatttgtattgtctgcattattgcaaaaacaaatatccttgaatgtgcaagttgga-acaattgttccaacatgtgtttaggcatctctataagat 20465263  T
Q  746 gttggatatgatgttccaacatcct 770  Q
    |||||||||||||||||||||||||    
T  20465264 gttggatatgatgttccaacatcct 20465288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 646 - 691
Target Start/End: Original strand, 21722657 - 21722702
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatcc 691  Q
    |||||||||||||||||| ||| |||||||| ||||||||||||||    
T  21722657 ttgttgggtatttgtattagctgcattattgctaaaacaaatatcc 21722702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 741 - 782
Target Start/End: Complemental strand, 25806221 - 25806180
Alignment:
Q  741 aagatgttggatatgatgttccaacatcctgacacggttcag 782  Q
    ||||||||||||| ||||||||||||||||| ||||||||||    
T  25806221 aagatgttggatacgatgttccaacatcctggcacggttcag 25806180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 647 - 696
Target Start/End: Complemental strand, 33666698 - 33666649
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgat 696  Q
    ||||||||||||||||||||| |||| ||| |||||||||||||| ||||    
T  33666698 tgttgggtatttgtattggctgcattgttgctaaaacaaatatccttgat 33666649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 741 - 789
Target Start/End: Original strand, 9281056 - 9281104
Alignment:
Q  741 aagatgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    |||||||||||||||||| |||||||||||| |||| ||||| ||||||    
T  9281056 aagatgttggatatgatgctccaacatcctggcacgattcagtgtgcct 9281104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 647 - 691
Target Start/End: Original strand, 11992271 - 11992315
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatcc 691  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||    
T  11992271 tgttgggtatttgtgttggctgcattattgctaaaacaaatatcc 11992315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 741 - 789
Target Start/End: Complemental strand, 17235407 - 17235359
Alignment:
Q  741 aagatgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    ||||||||||||| |||| |||||||||||| |||||||||| ||||||    
T  17235407 aagatgttggatacgatgctccaacatcctggcacggttcagtgtgcct 17235359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 741 - 789
Target Start/End: Complemental strand, 19077956 - 19077908
Alignment:
Q  741 aagatgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    ||||||||||||| |||||||||||||| || |||||||||| ||||||    
T  19077956 aagatgttggatacgatgttccaacatcttggcacggttcagtgtgcct 19077908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 647 - 691
Target Start/End: Complemental strand, 20653979 - 20653935
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatcc 691  Q
    |||||||||||||||||| || |||||||| ||||||||||||||    
T  20653979 tgttgggtatttgtattgtctgcattattgctaaaacaaatatcc 20653935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 741 - 789
Target Start/End: Complemental strand, 23879698 - 23879650
Alignment:
Q  741 aagatgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    ||||||||||||| |||| |||||||||||| |||||||||| ||||||    
T  23879698 aagatgttggatacgatgctccaacatcctggcacggttcagtgtgcct 23879650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 741 - 789
Target Start/End: Complemental strand, 25970490 - 25970442
Alignment:
Q  741 aagatgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    |||||||||||||||||| ||||||||| || |||||||||| ||||||    
T  25970490 aagatgttggatatgatgctccaacatcttggcacggttcagtgtgcct 25970442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 741 - 789
Target Start/End: Complemental strand, 25974930 - 25974882
Alignment:
Q  741 aagatgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    |||||||||||||||||| ||||||||| || |||||||||| ||||||    
T  25974930 aagatgttggatatgatgctccaacatcttggcacggttcagtgtgcct 25974882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 743 - 794
Target Start/End: Original strand, 21316941 - 21316992
Alignment:
Q  743 gatgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttt 794  Q
    ||||||||||||||||||||||||||||| ||  |||||| ||||| |||||    
T  21316941 gatgttggatatgatgttccaacatcctggcatagttcagtgtgccctgttt 21316992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 646 - 696
Target Start/End: Complemental strand, 17856105 - 17856055
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgat 696  Q
    |||||||||||||||||||| | |||| ||| |||||||||||||| ||||    
T  17856105 ttgttgggtatttgtattggatgcattgttgctaaaacaaatatccttgat 17856055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 647 - 696
Target Start/End: Complemental strand, 19168355 - 19168306
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgat 696  Q
    ||||||||||||||||||||| |||| ||| ||||| |||||||| ||||    
T  19168355 tgttgggtatttgtattggctgcattgttgctaaaataaatatccttgat 19168306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 646 - 691
Target Start/End: Original strand, 21705779 - 21705824
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatcc 691  Q
    |||||| ||||||||||||| | |||||||| ||||||||||||||    
T  21705779 ttgttgagtatttgtattggatgcattattgctaaaacaaatatcc 21705824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 2e-55; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 649 - 901
Target Start/End: Original strand, 979634 - 979884
Alignment:
Q  649 ttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt-gccattactacaagatgt 747  Q
    ||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||| ||||||||||| || || |  ||| ||  |||||||    
T  979634 ttgggtatttgtattggctacattattgctaaaacaaatatctatgattgtgatgttggatactatgttccaacatattttaggtatttctgtaagatgt 979733  T
Q  748 tggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatcttattaaggaatccacgttctcatat 847  Q
    |||||||||||||||||||||  | |||||||||| ||||||||||||||| |   ||||| ||| |||||||||||||||||||  |||| ||||| ||    
T  979734 tggatatgatgttccaacatctcggcacggttcagtgtgccttgttttatgcctgattgtatgcgcgctttatcttattaaggaa--cacg-tctcaaat 979830  T
Q  848 cttgatgaccaagcaacgcacatatttgttcataatcagttgtatttttattcc 901  Q
    |||| |||||||||||||| ||||| | |||| ||||||||||  |||||||||    
T  979831 cttgctgaccaagcaacgcgcatatctattcagaatcagttgtggttttattcc 979884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 647 - 901
Target Start/End: Original strand, 286151 - 286404
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt-gccattactacaagat 745  Q
    ||||||||||||||||||||| ||| |||| ||||| |||||| |||| |||||||||||||||| |||||||||||  | |  | |||  ||  |||||    
T  286151 tgttgggtatttgtattggctgcatcattgctaaaataaatattcatgtttgtgatgttggatactatgttccaacatgtttcaggcatctctgtaagat 286250  T
Q  746 gttggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatgtt-gtacgcgggctttatcttattaaggaatccacgttctca 844  Q
    |||||||| ||||||||||||||||  |||||||||| ||| ||||||| ||| |||||| ||||||| |  |||||||||||||||| || | ||| ||    
T  286251 gttggatacgatgttccaacatcctagcacggttcagtgtgtcttgtttcatg-catgtttgtacgcgcg--ttatcttattaaggaaacctctttccca 286347  T
Q  845 tatcttgatgaccaagcaacgcacatatttgttcataatcagttgtatttttattcc 901  Q
    |||||||||||||||||||||| ||||| ||  || ||||| ||||| |||||||||    
T  286348 tatcttgatgaccaagcaacgcgcatatctgcacagaatcacttgtacttttattcc 286404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 647 - 824
Target Start/End: Original strand, 3551731 - 3551908
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatattgccattactacaagatg 746  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||| |||||| || ||||||    | | | |||| ||  ||||||    
T  3551731 tgttgggtatttgtattggctgcattattgctaaaacaaatatccatgtttgtgatgtgggatactatattccaaatcttttagacatttctgtaagatg 3551830  T
Q  747 ttggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatctta 824  Q
    |||||||||||||||||||||| || |||||||||| ||||||||||||||| |   |||| |||| |||||||||||    
T  3551831 ttggatatgatgttccaacatcgtggcacggttcagtgtgccttgttttatgcctgattgttcgcgcgctttatctta 3551908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 646 - 723
Target Start/End: Original strand, 6578571 - 6578648
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    ||||||| |||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  6578571 ttgttggatatttgtattggctgcattattgctaaaacaaatatccatgtttgtgatgttggatactatgttccaaca 6578648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 659 - 872
Target Start/End: Original strand, 6578812 - 6579026
Alignment:
Q  659 gtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt-gccattactacaagatgttggatatgat 757  Q
    ||||||||| |||| ||| |||||||||||  |||| |||||||||||||||| |  | ||||||  | || | |||| ||  ||||||||||||| |||    
T  6578812 gtattggcttcattgttgctaaaacaaatactcatgtttgtgatgttggatacgagttgccaacatgttttaggcatttctgtaagatgttggatacgat 6578911  T
Q  758 gttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatcttattaaggaatccacgttctcatatcttgatgacc 857  Q
    ||||||||||||||||||||||||| ||| || |||| ||  |   ||||||||  |  || ||||||||||||| || |||| |||||||||| || ||    
T  6578912 gttccaacatcctgacacggttcagtgtgtctggtttcatacctatttgtacgcacgtcttttcttattaaggaaacctcgttttcatatcttggtggcc 6579011  T
Q  858 aagcaacgcacatat 872  Q
    ||||||||| |||||    
T  6579012 aagcaacgcgcatat 6579026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 647 - 782
Target Start/End: Complemental strand, 21547692 - 21547555
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt--gccattactacaaga 744  Q
    ||||||||||||||||||||| |||||||| ||||| |||||| | || ||||| |||||||  |||||||||||||  | ||    |||  ||| ||||    
T  21547692 tgttgggtatttgtattggctgcattattgctaaaataaatattcttgtttgtgttgttggaaccaatgttccaacatgtgtttatgcatctctataaga 21547593  T
Q  745 tgttggatatgatgttccaacatcctgacacggttcag 782  Q
    ||||||||| ||||||||||| ||||||||| ||||||    
T  21547592 tgttggatacgatgttccaacttcctgacacagttcag 21547555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 745 - 826
Target Start/End: Original strand, 21253347 - 21253428
Alignment:
Q  745 tgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatcttatt 826  Q
    |||| |||| |||||||||||||||||||||||||||| ||||||||||| ||| |   ||||||||| ||||||| |||||    
T  21253347 tgttagatacgatgttccaacatcctgacacggttcagtgtgccttgtttcatgcctgtttgtacgcgtgctttatattatt 21253428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 647 - 700
Target Start/End: Complemental strand, 28052243 - 28052190
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtg 700  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| || |||||    
T  28052243 tgttgggtatttgtattggctgcattattgttaaaacaaatatccttgtttgtg 28052190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 647 - 723
Target Start/End: Original strand, 21253293 - 21253368
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    ||||| |||||||||||| || |||||||| ||||||||||||||||| ||||| |||| ||||| |||||||||||    
T  21253293 tgttgagtatttgtattg-ctgcattattgctaaaacaaatatccatgtttgtgttgttagatacgatgttccaaca 21253368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 646 - 779
Target Start/End: Complemental strand, 28052048 - 28051913
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt--gccattactacaag 743  Q
    |||| ||||||||||||||| | |||||||| |||||||||||||  |  ||||| |||||||  |||||||||||||  | ||  | |||  ||  |||    
T  28052048 ttgtagggtatttgtattggttgcattattgctaaaacaaatatctttatttgtgttgttggaaccaatgttccaacatgtgtttaggcatctctgtaag 28051949  T
Q  744 atgttggatatgatgttccaacatcctgacacggtt 779  Q
    |||||||||| ||||||||||||||||| |||||||    
T  28051948 atgttggatacgatgttccaacatcctggcacggtt 28051913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 646 - 690
Target Start/End: Original strand, 18482622 - 18482666
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatc 690  Q
    |||||||||||||||||||||| |||||||| |||||||||||||    
T  18482622 ttgttgggtatttgtattggctgcattattgctaaaacaaatatc 18482666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 647 - 721
Target Start/End: Complemental strand, 296305 - 296231
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaa 721  Q
    ||||||||||||||||||| | |||| ||| |||||||||||||| || ||||| ||| |||  |||||||||||    
T  296305 tgttgggtatttgtattggttgcattgttgctaaaacaaatatccttgtttgtgttgtgggaaccaatgttccaa 296231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 744 - 786
Target Start/End: Complemental strand, 11657109 - 11657067
Alignment:
Q  744 atgttggatatgatgttccaacatcctgacacggttcagcgtg 786  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  11657109 atgttggatacgatgttccaacatcttgacacggttcagcgtg 11657067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 646 - 696
Target Start/End: Original strand, 15572255 - 15572305
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgat 696  Q
    |||||||||||||||||||||| |||| ||| |||||||||||||| ||||    
T  15572255 ttgttgggtatttgtattggctgcattgttgctaaaacaaatatccttgat 15572305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 741 - 791
Target Start/End: Original strand, 18063553 - 18063603
Alignment:
Q  741 aagatgttggatatgatgttccaacatcctgacacggttcagcgtgccttg 791  Q
    ||||||||||||| || |||||||||||||| |||||||||| ||||||||    
T  18063553 aagatgttggatacgacgttccaacatcctggcacggttcagtgtgccttg 18063603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 741 - 782
Target Start/End: Original strand, 18482719 - 18482760
Alignment:
Q  741 aagatgttggatatgatgttccaacatcctgacacggttcag 782  Q
    ||||||||||||| |||||| |||||||||||||||||||||    
T  18482719 aagatgttggatacgatgtttcaacatcctgacacggttcag 18482760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 647 - 787
Target Start/End: Original strand, 13514868 - 13515010
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtg-atgttggatacaatgttccaacaaatattgc--cattactacaag 743  Q
    ||||||||||||||||||||| |||| ||| ||||||||||||||  ||| ||| | ||||||  |||||||||||||  | ||    |||  ||  |||    
T  13514868 tgttgggtatttgtattggctgcattgttgctaaaacaaatatcctcgat-gtgtaagttggaaccaatgttccaacatgtgtttaagcatctctgtaag 13514966  T
Q  744 atgttggatatgatgttccaacatcctgacacggttcagcgtgc 787  Q
    |||||||||| ||||||||||||||||  |||||||||| ||||    
T  13514967 atgttggatacgatgttccaacatcctagcacggttcagtgtgc 13515010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 647 - 691
Target Start/End: Original strand, 17135395 - 17135439
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatcc 691  Q
    ||||||||||||||||||||| |||| ||| ||||||||||||||    
T  17135395 tgttgggtatttgtattggctgcattgttgctaaaacaaatatcc 17135439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 741 - 789
Target Start/End: Original strand, 17135491 - 17135539
Alignment:
Q  741 aagatgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    |||||||||||||||||| |||||||||||| |||||||| | ||||||    
T  17135491 aagatgttggatatgatgctccaacatcctggcacggttcggtgtgcct 17135539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 647 - 691
Target Start/End: Original strand, 23953808 - 23953852
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatcc 691  Q
    ||||||||||||||||||||| |||| ||| ||||||||||||||    
T  23953808 tgttgggtatttgtattggctgcattgttgctaaaacaaatatcc 23953852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 743 - 794
Target Start/End: Original strand, 214443 - 214494
Alignment:
Q  743 gatgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttt 794  Q
    ||||||||||| |||||||||||||| || |||||||||| ||| |||||||    
T  214443 gatgttggatacgatgttccaacatcttggcacggttcagtgtgtcttgttt 214494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 647 - 690
Target Start/End: Original strand, 7028321 - 7028364
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatc 690  Q
    ||||||||||||||||||||| |||| ||| |||||||||||||    
T  7028321 tgttgggtatttgtattggctgcattgttgctaaaacaaatatc 7028364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 744 - 838
Target Start/End: Complemental strand, 18477904 - 18477809
Alignment:
Q  744 atgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttt-tatgtcatgttgtacgcgggctttatcttattaaggaatccacg 838  Q
    |||||||||| |||||||||||||| || |||||||||| ||||| ||||| | || | || | |||||   |||||||||||||||||| |||||    
T  18477904 atgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttggtttacgcaatctttatcttattaaggaaaccacg 18477809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 743 - 794
Target Start/End: Complemental strand, 25020207 - 25020156
Alignment:
Q  743 gatgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttt 794  Q
    ||||||||||| |||||||||||||| || ||||||| || |||||||||||    
T  25020207 gatgttggatacgatgttccaacatcttgccacggtttagtgtgccttgttt 25020156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 743 - 789
Target Start/End: Original strand, 17042108 - 17042154
Alignment:
Q  743 gatgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    ||||||||||| |||||||| |||||||| |||||||||| ||||||    
T  17042108 gatgttggatacgatgttccgacatcctggcacggttcagtgtgcct 17042154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 1e-49; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 678 - 904
Target Start/End: Complemental strand, 32862522 - 32862294
Alignment:
Q  678 taaaacaaatatccatgattgt-gatgttggatacaatgttccaacaaatattgc-cattactacaagatgttggatatgatgttccaacatcctgacac 775  Q
    ||||| |||||||||||  ||| |||||||||||| |||||||||||  | ||   ||||  ||| ||||||||||||||||||||||||||||||| ||    
T  32862522 taaaataaatatccatgtgtgttgatgttggatactatgttccaacatgttttatgcatttttacgagatgttggatatgatgttccaacatcctgatac 32862423  T
Q  776 ggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatcttattaaggaatccacgttctcatatcttgatgaccaagcaacgcacatatttg 875  Q
    ||||||| ||||||| |||||||   || |||||||| |||||||| ||||||||||||||||| ||||||| ||| |||||||||||||| ||||||||    
T  32862422 ggttcagtgtgccttattttatgcattgatgtacgcgcgctttatcatattaaggaatccacgtcctcatattttgctgaccaagcaacgcgcatatttg 32862323  T
Q  876 ttcataatcagttgtatttttattcctaa 904  Q
    |||| ||||||||||  ||||||||||||    
T  32862322 ttcagaatcagttgtgattttattcctaa 32862294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 646 - 899
Target Start/End: Complemental strand, 41786332 - 41786088
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatattgccattactacaagat 745  Q
    ||||||| |||||||||||||| |||||||| |||||||||||||||||  ||||||  ||||||  |||||  |         | ||||   |||||||    
T  41786332 ttgttggatatttgtattggctgcattattgctaaaacaaatatccatgtatgtgataatggatatcatgtttta---------ggcattttcacaagat 41786242  T
Q  746 gttggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatcttattaaggaatccacgttctcat 845  Q
    |||||||||||||||||||||||||| ||||||||||  || ||||||||||| | ||   |||||| ||||||||||||||||||||||| || |||||    
T  41786241 gttggatatgatgttccaacatcctggcacggttcagtatgtcttgttttatgccttgcactacgcgcgctttatcttattaaggaatccatgtcctcat 41786142  T
Q  846 atcttgatgaccaagcaacgcacatatttgttcataatcagttgtatttttatt 899  Q
    |||||| ||| |||||||||| ||||| |||||| |||||||||| ||| ||||    
T  41786141 atcttgttgatcaagcaacgcgcatatctgttcagaatcagttgtttttgtatt 41786088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 659 - 904
Target Start/End: Complemental strand, 9069840 - 9069594
Alignment:
Q  659 gtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt-gccattactacaagatgttggatatgat 757  Q
    |||||| || |||| ||| ||||||||||| ||||| ||||||||||||||||||  ||||||||  | || | |||| ||  ||||||||||||| |||    
T  9069840 gtattgacttcattgttgctaaaacaaatacccatgtttgtgatgttggatacaagtttccaacatgttttcggcatttctgtaagatgttggatacgat 9069741  T
Q  758 gttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatcttattaaggaatccacgttctcatatcttgatgacc 857  Q
    ||||||||||||||  ||||||||| ||||||  ||| ||| |   |||||| || |  || ||||||||||||| || |||| |||||||||| || ||    
T  9069740 gttccaacatcctggaacggttcagtgtgcctgatttcatgcctatttgtactcgcgtcttttcttattaaggaaacctcgttttcatatcttggtggcc 9069641  T
Q  858 aagcaacgcacatatttgttcataatcagttgtatttttattcctaa 904  Q
    ||||||||| ||||| ||| || |||||||||| || ||||||||||    
T  9069640 aagcaacgcgcatatctgtacaaaatcagttgttttattattcctaa 9069594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 647 - 904
Target Start/End: Complemental strand, 15623344 - 15623086
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt-gccattactacaagat 745  Q
    ||||||||||||||||||| | ||||||||  |||| ||||||||||  |||||  ||||||||| ||| |||||||  | || | |||| ||  |||||    
T  15623344 tgttgggtatttgtattggttgcattattgccaaaataaatatccatctttgtgtagttggatactatgatccaacatgttttaggcatttctgtaagat 15623245  T
Q  746 gttggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatcttattaaggaatccacgttctcat 845  Q
    |||||||| ||||||||||||||||| ||||||| ||  ||||| | |  ||| |   ||||  |||  ||||||||||||  ||||||||||| |||||    
T  15623244 gttggatacgatgttccaacatcctggcacggttaagtatgcctaggtacatgcctacttgtttgcgcactttatcttattggggaatccacgtcctcat 15623145  T
Q  846 atcttgatgaccaagcaacgcacatatttgttcataatcagttgtatttttattcctaa 904  Q
    |||||  ||  |||||||||| ||||| |||||| |||||||||| || ||||||||||    
T  15623144 atcttattggtcaagcaacgcgcatatctgttcaaaatcagttgttttgttattcctaa 15623086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 646 - 787
Target Start/End: Original strand, 19182932 - 19183074
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt-gccattactacaaga 744  Q
    |||||||||||||||||||||| |||||||| |||||||||||||| |  ||||| ||||||||||||||||||||||  | || | |||  ||  ||||    
T  19182932 ttgttgggtatttgtattggctacattattgctaaaacaaatatccttacttgtgttgttggatacaatgttccaacatgttttaggcatctctgtaaga 19183031  T
Q  745 tgttggatatgatgttccaacatcctgacacggttcagcgtgc 787  Q
    ||||||||| |||||||  |||||||| |||||||||| ||||    
T  19183032 tgttggatacgatgttctgacatcctggcacggttcagtgtgc 19183074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 646 - 723
Target Start/End: Complemental strand, 10683335 - 10683258
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    ||||| |||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  10683335 ttgtttggtatttgtattggctgcattattgctaaaacaaatatccatgtttgtgatgttggatactatgttccaaca 10683258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 642 - 723
Target Start/End: Complemental strand, 10723390 - 10723309
Alignment:
Q  642 caagttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    |||||| |||| |||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  10723390 caagttattggatatttgtattggctacattattgctaaaacaaatatccatgtttgtgatgttggatactatgttccaaca 10723309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 646 - 723
Target Start/End: Complemental strand, 10896975 - 10896898
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    ||||| |||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  10896975 ttgtttggtatttgtattggctgcattattgctaaaacaaatatccatgtttgtgatgttggatactatgttccaaca 10896898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 642 - 723
Target Start/End: Complemental strand, 10937159 - 10937078
Alignment:
Q  642 caagttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    |||||| |||| |||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  10937159 caagttattggatatttgtattggctacattattgctaaaacaaatatccatgtttgtgatgttggatactatgttccaaca 10937078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 646 - 723
Target Start/End: Complemental strand, 10718562 - 10718485
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    |||||||||||||||||||||| |||||||| |||| |||||||||||| ||| |||||||||||| |||||||||||    
T  10718562 ttgttgggtatttgtattggctgcattattgctaaagcaaatatccatgtttgcgatgttggatactatgttccaaca 10718485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 646 - 723
Target Start/End: Complemental strand, 10932331 - 10932254
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    |||||||||||||||||||||| |||||||| |||| |||||||||||| ||| |||||||||||| |||||||||||    
T  10932331 ttgttgggtatttgtattggctgcattattgctaaagcaaatatccatgtttgcgatgttggatactatgttccaaca 10932254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 647 - 723
Target Start/End: Original strand, 15161753 - 15161829
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| || ||||| |||||||  |||||||||||||    
T  15161753 tgttgggtatttgtattggctgcattattgttaaaacaaatatccttgtttgtgttgttggaaccaatgttccaaca 15161829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 647 - 771
Target Start/End: Complemental strand, 10725106 - 10724980
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaa--tattgccattactacaaga 744  Q
    ||||||||||||||||||||| |||||||| |||||||||||||| || ||||| |||||||  ||||||||||||| |  | | | |||  ||  ||||    
T  10725106 tgttgggtatttgtattggctgcattattgctaaaacaaatatccttgtttgtgttgttggaaccaatgttccaacatatgtgtaggcatctctgtaaga 10725007  T
Q  745 tgttggatatgatgttccaacatcctg 771  Q
    ||||||||| |||||||||||||||||    
T  10725006 tgttggatacgatgttccaacatcctg 10724980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 647 - 771
Target Start/End: Complemental strand, 10938875 - 10938749
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaa--tattgccattactacaaga 744  Q
    ||||||||||||||||||||| |||||||| |||||||||||||| || ||||| |||||||  ||||||||||||| |  | | | |||  ||  ||||    
T  10938875 tgttgggtatttgtattggctgcattattgctaaaacaaatatccttgtttgtgttgttggaaccaatgttccaacatatgtgtaggcatctctgtaaga 10938776  T
Q  745 tgttggatatgatgttccaacatcctg 771  Q
    ||||||||| |||||||||||||||||    
T  10938775 tgttggatacgatgttccaacatcctg 10938749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 646 - 723
Target Start/End: Complemental strand, 33744575 - 33744498
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    |||||||||||||||||||||| |||||||| ||||||||||||  ||| |||||||||||||||  |||||||||||    
T  33744575 ttgttgggtatttgtattggctgcattattgctaaaacaaatatatatgtttgtgatgttggatattatgttccaaca 33744498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 647 - 723
Target Start/End: Original strand, 15699587 - 15699663
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    |||| |||||||||||||||| |||| ||  |||||||||||||| || ||||| |||||||| |||||||||||||    
T  15699587 tgtttggtatttgtattggctgcattgttactaaaacaaatatccttgtttgtgttgttggatgcaatgttccaaca 15699663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 743 - 794
Target Start/End: Original strand, 10197596 - 10197647
Alignment:
Q  743 gatgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttt 794  Q
    |||||||||||||||||||||||||| || |||||||||| ||||| |||||    
T  10197596 gatgttggatatgatgttccaacatcttggcacggttcagtgtgccatgttt 10197647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 646 - 789
Target Start/End: Complemental strand, 16384800 - 16384655
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtg-atgttggatacaatgttccaacaaatatt--gccattactacaa 742  Q
    |||||||||||||||||||||| |||| ||| |||||||||||||| || ||||| | |||| |  |||||||||||||  | ||  | | |  ||  ||    
T  16384800 ttgttgggtatttgtattggctgcattgttgctaaaacaaatatccttg-ttgtgtaagttgaaaccaatgttccaacatgtgtttaggcgtctctggaa 16384702  T
Q  743 gatgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    ||||||||||| |||| |||||||||||||||| |||||| ||||||    
T  16384701 gatgttggatacgatgctccaacatcctgacacagttcagtgtgcct 16384655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 51996044 - 51996001
Alignment:
Q  14 ttgggttgagcttgtgtcctttattgcagcatatcaaagagcct 57  Q
    |||||||||  |||||||||||||||||||||||||||||||||    
T  51996044 ttgggttgaagttgtgtcctttattgcagcatatcaaagagcct 51996001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 52008576 - 52008533
Alignment:
Q  14 ttgggttgagcttgtgtcctttattgcagcatatcaaagagcct 57  Q
    |||||||||  |||||||||||||||||||||||||||||||||    
T  52008576 ttgggttgaagttgtgtcctttattgcagcatatcaaagagcct 52008533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 744 - 794
Target Start/End: Complemental strand, 10718285 - 10718235
Alignment:
Q  744 atgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttt 794  Q
    |||||||||| ||||||||||||||||| |||||||||| ||||| |||||    
T  10718285 atgttggatacgatgttccaacatcctggcacggttcagtgtgccctgttt 10718235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 744 - 794
Target Start/End: Complemental strand, 10932054 - 10932004
Alignment:
Q  744 atgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttt 794  Q
    |||||||||| ||||||||||||||||| |||||||||| ||||| |||||    
T  10932054 atgttggatacgatgttccaacatcctggcacggttcagtgtgccctgttt 10932004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 741 - 789
Target Start/End: Original strand, 18601006 - 18601054
Alignment:
Q  741 aagatgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    ||||||||||||| |||| |||||||||||| |||||||||| ||||||    
T  18601006 aagatgttggatacgatgctccaacatcctggcacggttcagtgtgcct 18601054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 744 - 838
Target Start/End: Complemental strand, 49975058 - 49974963
Alignment:
Q  744 atgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttt-tatgtcatgttgtacgcgggctttatcttattaaggaatccacg 838  Q
    |||||||||| ||||||||||||||||| |||| ||||| ||||| ||||| | || | || | ||| || |||||||||| |||||||| |||||    
T  49975058 atgttggatacgatgttccaacatcctggcacgattcagtgtgccctgtttatgtggcttggtttacacgagctttatctttttaaggaaaccacg 49974963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 570 - 633
Target Start/End: Complemental strand, 52007964 - 52007902
Alignment:
Q  570 ataggagtaataatctcattttctgaaaattagcaacttagaacattttaatcatagaatataa 633  Q
    ||||||||| |||||| ||||||||||| ||||| |||||||||||||| ||||  ||||||||    
T  52007964 ataggagtagtaatctaattttctgaaa-ttagctacttagaacattttgatcagtgaatataa 52007902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 744 - 794
Target Start/End: Complemental strand, 10683057 - 10683007
Alignment:
Q  744 atgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttt 794  Q
    |||||||||| |||||||||||||| || |||||||||| ||||| |||||    
T  10683057 atgttggatacgatgttccaacatcttggcacggttcagtgtgccctgttt 10683007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 744 - 794
Target Start/End: Complemental strand, 10896697 - 10896647
Alignment:
Q  744 atgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttt 794  Q
    |||||||||| |||||||||||||| || |||||||||| ||||| |||||    
T  10896697 atgttggatacgatgttccaacatcttggcacggttcagtgtgccctgttt 10896647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 647 - 696
Target Start/End: Complemental strand, 25117765 - 25117716
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgat 696  Q
    ||||||||||||||||||||| |||| ||| || ||||||||||| ||||    
T  25117765 tgttgggtatttgtattggctgcattgttgctacaacaaatatccttgat 25117716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 52008118 - 52008081
Alignment:
Q  294 acaaacttttgctatggaattaacagagattaaaatga 331  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  52008118 acaaaattttgctatgaaattaacagagattaaaatga 52008081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 3e-47; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 646 - 904
Target Start/End: Original strand, 21249447 - 21249707
Alignment:
Q  646 ttgttgggtatttgtattggctcca-ttattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt-gccattactacaag 743  Q
    |||||||||||||||||||||  || |||||| ||||||||||||||||||||||| |||||||||| |||||||||||  | |  | |||| ||  |||    
T  21249447 ttgttgggtatttgtattggcagcaattattggtaaaacaaatatccatgattgtgttgttggatactatgttccaacatgtttcaggcatttctgtaag 21249546  T
Q  744 atgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatcttattaaggaatccacgttctc 843  Q
    |||||||||| ||||||||||||||||| ||||||| || ||||||||||| ||| |   |||||| || |||||||||||||||||||||||||| |||    
T  21249547 atgttggatacgatgttccaacatcctggcacggtttagtgtgccttgtttcatgcctgattgtacacgcgctttatcttattaaggaatccacgtcctc 21249646  T
Q  844 atatcttgatgaccaagcaacgcacatatttgttcataatcagttgtatttttattcctaa 904  Q
     ||||||  ||||||| |||||| ||||| ||| || |||| |||||  ||||||| ||||    
T  21249647 gtatcttattgaccaaacaacgcgcatatctgtacagaatctgttgtgcttttatttctaa 21249707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 647 - 780
Target Start/End: Complemental strand, 15329228 - 15329094
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca-aatattgccattactacaagat 745  Q
    ||||||||||||||||||||| |||| ||| |||||||||||| |||| ||||| |||||||  |||||||||||||  ||   | |||  ||  |||||    
T  15329228 tgttgggtatttgtattggctacattgttgctaaaacaaatattcatgtttgtgttgttggaaccaatgttccaacatgattcaggcatgtctgtaagat 15329129  T
Q  746 gttggatatgatgttccaacatcctgacacggttc 780  Q
    |||||||| ||||||||||||||||| ||||||||    
T  15329128 gttggatacgatgttccaacatcctggcacggttc 15329094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 647 - 723
Target Start/End: Complemental strand, 21531286 - 21531210
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    ||||| ||||||||||||| | |||||||| |||||||||||| |||| ||||| ||||| |||| |||||||||||    
T  21531286 tgttgcgtatttgtattggttgcattattgctaaaacaaatattcatgtttgtgttgttgaatactatgttccaaca 21531210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 738 - 794
Target Start/End: Complemental strand, 27108259 - 27108203
Alignment:
Q  738 tacaagatgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttt 794  Q
    |||| ||||||||||| ||||||||||||||||| |||||||||| ||||| |||||    
T  27108259 tacatgatgttggatacgatgttccaacatcctggcacggttcagtgtgccatgttt 27108203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 743 - 832
Target Start/End: Complemental strand, 31588291 - 31588201
Alignment:
Q  743 gatgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttt-tatgtcatgttgtacgcgggctttatcttattaaggaa 832  Q
    |||||||||||| ||||||||||||| || |||||||||| ||||| ||||| | || | || | |||||| |||||||||| ||||||||    
T  31588291 gatgttggatataatgttccaacatcttgtcacggttcagtgtgccctgtttatgtgccttggtttacgcgtgctttatctttttaaggaa 31588201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 741 - 789
Target Start/End: Original strand, 24789505 - 24789553
Alignment:
Q  741 aagatgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    ||||||||||||| |||| |||||||||||| |||||||||| ||||||    
T  24789505 aagatgttggatacgatgctccaacatcctggcacggttcagtgtgcct 24789553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 647 - 690
Target Start/End: Complemental strand, 12911401 - 12911358
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatc 690  Q
    ||||||||||||||||||||| |||| ||| |||||||||||||    
T  12911401 tgttgggtatttgtattggctgcattgttgctaaaacaaatatc 12911358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 646 - 689
Target Start/End: Complemental strand, 23759534 - 23759491
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatat 689  Q
    |||||||||||||||||||||| |||| ||| ||||||||||||    
T  23759534 ttgttgggtatttgtattggctgcattgttgctaaaacaaatat 23759491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 743 - 794
Target Start/End: Complemental strand, 27111843 - 27111792
Alignment:
Q  743 gatgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttt 794  Q
    ||||||||||| ||||||||||||||||| |||||||||  ||||| |||||    
T  27111843 gatgttggatacgatgttccaacatcctggcacggttcaatgtgccctgttt 27111792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 744 - 866
Target Start/End: Original strand, 36397839 - 36397961
Alignment:
Q  744 atgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttt-tatgtcatgttgtacgcgggctttatcttattaaggaatccacgttct 842  Q
    |||||||||| |||||||||||||| || |||||||||| ||||| ||||| | || | || | |||||   |||||||||||||||||| | |||| ||    
T  36397839 atgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttggtttacgcaatctttatcttattaaggaaactacgtcct 36397938  T
Q  843 catatcttgatgaccaagcaacgc 866  Q
     || ||||| | ||||||||||||    
T  36397939 -atttcttgttcaccaagcaacgc 36397961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 646 - 691
Target Start/End: Complemental strand, 22614450 - 22614405
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatcc 691  Q
    |||||||||||||||||||||| |||| ||| ||||| ||||||||    
T  22614450 ttgttgggtatttgtattggctgcattgttgctaaaataaatatcc 22614405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 659 - 723
Target Start/End: Original strand, 24311162 - 24311224
Alignment:
Q  659 gtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    ||||||||| |||| ||| |||||||||||  ||||  | |||||||||||||||||||||||||    
T  24311162 gtattggcttcattgttgctaaaacaaatactcatg--tatgatgttggatacaatgttccaaca 24311224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 743 - 788
Target Start/End: Original strand, 24311201 - 24311246
Alignment:
Q  743 gatgttggatatgatgttccaacatcctgacacggttcagcgtgcc 788  Q
    |||||||||||  |||||||||||||||| |||||||||| |||||    
T  24311201 gatgttggatacaatgttccaacatcctggcacggttcagtgtgcc 24311246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 1e-46; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 647 - 904
Target Start/End: Original strand, 13941266 - 13941518
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt-gccattactacaagat 745  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||| ||||| |||||||||| |||||||||||  | || | ||||  |  |||||    
T  13941266 tgttgggtttttgtattggctgcattattgctaaaacaaatatccatgtttgtgttgttggataccatgttccaacatgttttaggcatttttgtaagat 13941365  T
Q  746 gttggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatcttattaaggaatccacgttctcat 845  Q
    ||||||||||||||||||||||||||||| ||||||  |||||| |||||||| |   ||||||||| |  || ||||      ||||||||||||||||    
T  13941366 gttggatatgatgttccaacatcctgacatggttcaatgtgcctagttttatgcctgattgtacgcgcgtcttttctt------gaatccacgttctcat 13941459  T
Q  846 atcttgatgaccaagcaacgcacatatttgttcataatcagttgtatttttattcctaa 904  Q
    |||||| ||||||| |||||||||||| ||| || ||||||||||  ||||||||||||    
T  13941460 atcttgttgaccaaacaacgcacatatctgtacaaaatcagttgtgcttttattcctaa 13941518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 652 - 899
Target Start/End: Original strand, 20713999 - 20714247
Alignment:
Q  652 ggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt-gccattactacaagatgttgg 750  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||  |||||||||||  |||||||||||  | |  | |||  ||| |||||||| |    
T  20713999 ggtatttgtattggctgcattattgctaaaacaaatatccatgtttaggatgttggatatcatgttccaacatgtttcaggcatctctataagatgttag 20714098  T
Q  751 atatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatgttgtacgcgggctttatcttattaaggaatccacgttctcatatctt 850  Q
    ||| |||||||||||||||||  |||||| || ||||||| ||| ||| |   ||||||||| |||||||||| |||||||| |||  ||| | ||||||    
T  20714099 atacgatgttccaacatcctggaacggtttagtgtgccttctttcatgcctgtttgtacgcgcgctttatctttttaaggaaaccattttcccgtatctt 20714198  T
Q  851 gatgaccaagcaacgcacatatttgttcataatcagttgtatttttatt 899  Q
      |||||||||||||| ||||| ||| || |||||| ||||||||||||    
T  20714199 actgaccaagcaacgcgcatatctgtacagaatcagatgtatttttatt 20714247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 646 - 787
Target Start/End: Original strand, 22081941 - 22082083
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatat-tgccattactacaaga 744  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||||||| ||||| ||||| |  ||||||||||||| || |  | |||  ||  ||||    
T  22081941 ttgttgggtatttgtattggctgtattgttgttaaaacaaatatccatgtttgtgttgttgaaatcaatgttccaacatatttcaggcatctctgtaaga 22082040  T
Q  745 tgttggatatgatgttccaacatcctgacacggttcagcgtgc 787  Q
    ||||||||| ||||||||||||||||| |||||||||| ||||    
T  22082041 tgttggatacgatgttccaacatcctggcacggttcagtgtgc 22082083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 646 - 788
Target Start/End: Complemental strand, 23624750 - 23624607
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca-aatattgccattactacaaga 744  Q
    |||||||||||||||||||||| |||||||| |||||||||||||| || || || |||||||  |||||| ||||||  ||     |||  ||  ||||    
T  23624750 ttgttgggtatttgtattggctgcattattgctaaaacaaatatccttgtttctgttgttggaaccaatgtcccaacatgattcaagcatgtctgtaaga 23624651  T
Q  745 tgttggatatgatgttccaacatcctgacacggttcagcgtgcc 788  Q
    ||||||||| ||||||||||||||||| |||||||||| |||||    
T  23624650 tgttggatacgatgttccaacatcctggcacggttcagtgtgcc 23624607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 646 - 789
Target Start/End: Complemental strand, 26037687 - 26037542
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt--gccattactacaag 743  Q
    |||||||||||||||||||||| |||||||| |||||||||||| | || ||||| |||||||  ||||||| |||||  | ||  | |||  ||  |||    
T  26037687 ttgttgggtatttgtattggctgcattattgctaaaacaaatattcttgtttgtgttgttggaaccaatgtttcaacatgtgtttaggcatctctgtaag 26037588  T
Q  744 atgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    |||| ||||| ||||||||||||||||| || ||||||| ||||||    
T  26037587 atgtcggatacgatgttccaacatcctggcatggttcagtgtgcct 26037542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 646 - 788
Target Start/End: Complemental strand, 38406270 - 38406127
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca-aatattgccattactacaaga 744  Q
    |||||||||||||||||||| |  ||||||| |||||||||||| | || ||||| |||||||  |||||||||||||  ||   | |||  ||| ||||    
T  38406270 ttgttgggtatttgtattggatttattattgctaaaacaaatattcttgtttgtgttgttggaaccaatgttccaacatgattcaggcatgtctataaga 38406171  T
Q  745 tgttggatatgatgttccaacatcctgacacggttcagcgtgcc 788  Q
    ||||||||| ||||||||| ||||||  |||||||||| |||||    
T  38406170 tgttggatacgatgttccagcatcctagcacggttcagtgtgcc 38406127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 647 - 708
Target Start/End: Complemental strand, 18222018 - 18221957
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttgga 708  Q
    ||||||||||||||||||| | |||| |||||||||||||||| |||| ||||| |||||||    
T  18222018 tgttgggtatttgtattggatgcattgttgttaaaacaaatattcatgtttgtgttgttgga 18221957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 647 - 723
Target Start/End: Original strand, 26328467 - 26328543
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    |||||||||||| |||||| | |||||||| |||||||||||| ||||  |||| |||||||  |||||||||||||    
T  26328467 tgttgggtatttatattggttgcattattgctaaaacaaatattcatgtatgtgttgttggaaccaatgttccaaca 26328543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 741 - 789
Target Start/End: Original strand, 30605037 - 30605085
Alignment:
Q  741 aagatgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    ||||||||||||| ||||||||||||||||| |||||||||| ||||||    
T  30605037 aagatgttggatacgatgttccaacatcctggcacggttcagtgtgcct 30605085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 649 - 707
Target Start/End: Original strand, 23419809 - 23419867
Alignment:
Q  649 ttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttgg 707  Q
    ||||||||||||||||||| |||| |||||||||||||||| | || ||||| ||||||    
T  23419809 ttgggtatttgtattggctgcattgttgttaaaacaaatattcttgtttgtgttgttgg 23419867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 646 - 691
Target Start/End: Original strand, 22251290 - 22251335
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatcc 691  Q
    |||||||||||||||||||||| |||| ||| ||||||||||||||    
T  22251290 ttgttgggtatttgtattggctgcattgttgctaaaacaaatatcc 22251335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 647 - 691
Target Start/End: Original strand, 22240228 - 22240272
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatcc 691  Q
    ||||||||||||||||||||| |||| ||| ||||||||||||||    
T  22240228 tgttgggtatttgtattggctgcattgttgctaaaacaaatatcc 22240272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 741 - 789
Target Start/End: Original strand, 22251387 - 22251435
Alignment:
Q  741 aagatgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    ||||||||||||| |||| |||||||||||| |||||||||| ||||||    
T  22251387 aagatgttggatacgatgctccaacatcctggcacggttcagtgtgcct 22251435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 647 - 691
Target Start/End: Original strand, 22404011 - 22404055
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatcc 691  Q
    ||||||||||||||||||||| |||| ||| ||||||||||||||    
T  22404011 tgttgggtatttgtattggctgcattgttgctaaaacaaatatcc 22404055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 647 - 691
Target Start/End: Complemental strand, 24190772 - 24190728
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatcc 691  Q
    ||||||||||||||||||||| |||| ||| ||||||||||||||    
T  24190772 tgttgggtatttgtattggctgcattgttgctaaaacaaatatcc 24190728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 743 - 833
Target Start/End: Complemental strand, 25674517 - 25674425
Alignment:
Q  743 gatgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttt-tatgtcatgttgtacgcgggc-tttatcttattaaggaat 833  Q
    |||||||||||| ||||||||||||  ||||| ||||||| ||||||||||| ||||    ||||||| || || ||||||||||||||||||    
T  25674517 gatgttggatataatgttccaacattttgacatggttcagtgtgccttgtttatatgcttagttgtacacgcgcttttatcttattaaggaat 25674425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 669 - 723
Target Start/End: Original strand, 20740302 - 20740354
Alignment:
Q  669 cattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    |||| ||| |||||||||||| ||||  |||||||||||||||||||||||||||    
T  20740302 catttttgctaaaacaaatattcatg--tgtgatgttggatacaatgttccaaca 20740354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 74; Significance: 2e-33; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 647 - 858
Target Start/End: Complemental strand, 38213 - 38001
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatattgc-cattactacaagat 745  Q
    ||||||||||||||||||||| |||||||| ||||||||||||  | | ||||||| ||||||||||||||||| ||  | |    ||||  |  |||||    
T  38213 tgttgggtatttgtattggctgcattattgctaaaacaaatatataagtttgtgatattggatacaatgttccatcatgtctcaagcatttatgtaagat 38114  T
Q  746 gttggatatgatgttccaacatcctgacacggttcagcgtgccttgttttatgtcatg-ttgtacgcgggctttatcttattaaggaatccacgttctca 844  Q
    |||||||| ||||||||||||||||| ||| ||| || || |||||||||||| | || ||||||||| ||||||||||||||||||||| | |||||||    
T  38113 gttggatacgatgttccaacatcctggcacagttaagtgtaccttgttttatg-cttgattgtacgcgcgctttatcttattaaggaatctatgttctca 38015  T
Q  845 tatcttgatgacca 858  Q
    ||||||| ||||||    
T  38014 tatcttgctgacca 38001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 58; Significance: 6e-24; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 646 - 723
Target Start/End: Complemental strand, 36650 - 36573
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||  |||||||||||    
T  36650 ttgttgggtatttgtattggctgcattattgctaaaacaaatatccatgtttgtgatgttggataatatgttccaaca 36573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 51; Significance: 1e-19; HSPs: 3)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 646 - 789
Target Start/End: Original strand, 17374 - 17519
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt--gccattactacaag 743  Q
    ||||||||||||||||||| || |||||||| |||||||||||||| || ||||| |||||||  |||||||||||||  | ||  |  ||  ||  |||    
T  17374 ttgttgggtatttgtattgactgcattattgctaaaacaaatatccttgtttgtgttgttggaaccaatgttccaacatgtgtttaggtatctctgtaag 17473  T
Q  744 atgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    ||||| |||||||||||||||||||||  |||||||||| ||||||    
T  17474 atgttagatatgatgttccaacatcctaccacggttcagtgtgcct 17519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 646 - 789
Target Start/End: Original strand, 26768 - 26913
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt--gccattactacaag 743  Q
    ||||||||||||||||||| || |||||||| |||||||||||||| || ||||| |||||||  |||||||||||||  | ||  |  ||  ||  |||    
T  26768 ttgttgggtatttgtattgactgcattattgctaaaacaaatatccttgtttgtgttgttggaaccaatgttccaacatgtgtttaggtatctctgtaag 26867  T
Q  744 atgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    ||||| |||||||||||||||||||||  |||||||||| ||||||    
T  26868 atgttagatatgatgttccaacatcctaccacggttcagtgtgcct 26913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #3
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 647 - 782
Target Start/End: Original strand, 6789 - 6927
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaacaaatatt--gccattactacaaga 744  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||| || ||||| |||||||  |||||||||||||  | ||  |||||   |  ||||    
T  6789 tgttgggtatttgtattggctacattattgctaaagcaaatatccttgtttgtgttgttggaaccaatgttccaacatgtgtttagccatctttgtaaga 6888  T
Q  745 tgttggatatgatgttccaacatcc-tgacacggttcag 782  Q
    | ||||||||||||||||||||||| || ||||||||||    
T  6889 ttttggatatgatgttccaacatccttggcacggttcag 6927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 46; Significance: 9e-17; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 646 - 723
Target Start/End: Original strand, 7828 - 7905
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatccatgattgtgatgttggatacaatgttccaaca 723  Q
    |||||||||||||||||||||| |||||||| |||||||||||||| |  ||||| |||||||  |||||||||||||    
T  7828 ttgttgggtatttgtattggctgcattattgctaaaacaaatatccttatttgtgttgttggaaccaatgttccaaca 7905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 691
Target Start/End: Original strand, 1616 - 1662
Alignment:
Q  645 gttgttgggtatttgtattggctccattattgttaaaacaaatatcc 691  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||    
T  1616 gttgttgggtatttgtattggctgcattattgctaaaacaaatatcc 1662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 741 - 789
Target Start/End: Original strand, 1714 - 1762
Alignment:
Q  741 aagatgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    ||||||||||||| ||||||||||||| ||| |||||||||| ||||||    
T  1714 aagatgttggatacgatgttccaacattctggcacggttcagtgtgcct 1762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 741 - 789
Target Start/End: Complemental strand, 16318 - 16270
Alignment:
Q  741 aagatgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    ||||||||||||| ||||||||||||||||| |||||||||| ||||||    
T  16318 aagatgttggatacgatgttccaacatcctggcacggttcagtgtgcct 16270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 36; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 743 - 794
Target Start/End: Complemental strand, 5778 - 5727
Alignment:
Q  743 gatgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttt 794  Q
    ||||||||||||||||||||||||||||| || ||||||| ||||| |||||    
T  5778 gatgttggatatgatgttccaacatcctggcatggttcagtgtgccctgttt 5727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 743 - 794
Target Start/End: Complemental strand, 12033 - 11982
Alignment:
Q  743 gatgttggatatgatgttccaacatcctgacacggttcagcgtgccttgttt 794  Q
    ||||||||||||||||||||||||||||| || ||||||| ||||| |||||    
T  12033 gatgttggatatgatgttccaacatcctggcatggttcagtgtgccctgttt 11982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 646 - 691
Target Start/End: Complemental strand, 2799 - 2754
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatcc 691  Q
    |||||||||||||||||||||| |||| ||| ||||||||||||||    
T  2799 ttgttgggtatttgtattggctgcattgttgctaaaacaaatatcc 2754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 646 - 691
Target Start/End: Original strand, 24927 - 24972
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatcc 691  Q
    |||||||||||||||||||||| |||| ||| ||||||||||||||    
T  24927 ttgttgggtatttgtattggctgcattgttgctaaaacaaatatcc 24972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 741 - 789
Target Start/End: Original strand, 25024 - 25072
Alignment:
Q  741 aagatgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    ||||||||||||| |||| |||||||||||| |||||||||| ||||||    
T  25024 aagatgttggatacgatgctccaacatcctggcacggttcagtgtgcct 25072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 744 - 789
Target Start/End: Complemental strand, 37400 - 37355
Alignment:
Q  744 atgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    ||||||||||  ||||||||||||||||||||||||||| ||||||    
T  37400 atgttggatacaatgttccaacatcctgacacggttcagtgtgcct 37355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 647 - 696
Target Start/End: Complemental strand, 37497 - 37448
Alignment:
Q  647 tgttgggtatttgtattggctccattattgttaaaacaaatatccatgat 696  Q
    ||||||||||||||||||||| |||||||| || || |||||||| ||||    
T  37497 tgttgggtatttgtattggctgcattattgctacaaaaaatatccttgat 37448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1001 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold1001
Description:

Target: scaffold1001; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 741 - 789
Target Start/End: Complemental strand, 775 - 727
Alignment:
Q  741 aagatgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    ||||||||||||| |||||||||||||| || |||||||||| ||||||    
T  775 aagatgttggatacgatgttccaacatcttggcacggttcagtgtgcct 727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 741 - 789
Target Start/End: Original strand, 15967 - 16015
Alignment:
Q  741 aagatgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    ||||||||||||| ||||||||||||||||| |||||||| | ||||||    
T  15967 aagatgttggatacgatgttccaacatcctggcacggttcggtgtgcct 16015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 741 - 789
Target Start/End: Complemental strand, 88559 - 88511
Alignment:
Q  741 aagatgttggatatgatgttccaacatcctgacacggttcagcgtgcct 789  Q
    |||||||||||||  ||||||||||||||||||| ||||||| ||||||    
T  88559 aagatgttggatacaatgttccaacatcctgacatggttcagtgtgcct 88511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 646 - 691
Target Start/End: Original strand, 109508 - 109553
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatcc 691  Q
    ||||||||||||||||||||||  ||| ||| ||||||||||||||    
T  109508 ttgttgggtatttgtattggctgtattgttgctaaaacaaatatcc 109553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 646 - 691
Target Start/End: Complemental strand, 159981 - 159936
Alignment:
Q  646 ttgttgggtatttgtattggctccattattgttaaaacaaatatcc 691  Q
    |||||| ||||||||||||||| |||| ||| ||||||||||||||    
T  159981 ttgttgtgtatttgtattggctgcattgttgctaaaacaaatatcc 159936  T

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