View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5971_low_2 (Length: 473)
Name: NF5971_low_2
Description: NF5971
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5971_low_2 |
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Alignment Details
Target: chr5 (Bit Score: 208; Significance: 1e-113; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 246 - 457
Target Start/End: Original strand, 29072029 - 29072240
Alignment:
| Q |
246 |
agaaatatgttatgcatgtacctccatcatagcttgaacccaataacgacgattgattgaattgacaccaatgacagtttttgtggggtgtttaacaact |
345 |
Q |
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| T |
29072029 |
agaaatatgttatgcatgtacctccatcatagcttgaacccaataacgacgattgattgaattgacaccaatgacagtttttgtggggtgtttaacaact |
29072128 |
T |
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| Q |
346 |
tggtagagaagccataaatggtatgcaaccattacaaagaggccactagggactaatatgagatcaagaattttcttgtccatttaattttatggaagca |
445 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
29072129 |
tggtagagaagccataaatggtatgcaaccattacaaagaggccactagggactaatatgagatcaagaattttcttgtccatttaattttatagaagca |
29072228 |
T |
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| Q |
446 |
atgtaatgtatt |
457 |
Q |
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|||||||||||| |
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| T |
29072229 |
atgtaatgtatt |
29072240 |
T |
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