View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5972-Insertion-10 (Length: 454)

Name: NF5972-Insertion-10
Description: NF5972
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5972-Insertion-10
NF5972-Insertion-10
[»] chr3 (57 HSPs)
chr3 (11-454)||(47279054-47279496)
chr3 (363-409)||(30311335-30311381)
chr3 (352-409)||(44743845-44743902)
chr3 (364-408)||(11612329-11612373)
chr3 (352-416)||(14339632-14339696)
chr3 (352-407)||(20501727-20501782)
chr3 (363-414)||(28703405-28703456)
chr3 (352-415)||(40063642-40063705)
chr3 (363-409)||(15048062-15048108)
chr3 (363-405)||(52769984-52770026)
chr3 (363-416)||(2667884-2667937)
chr3 (363-416)||(4222163-4222216)
chr3 (363-416)||(10499110-10499163)
chr3 (363-408)||(39253727-39253772)
chr3 (363-416)||(46518650-46518703)
chr3 (363-416)||(51903879-51903932)
chr3 (352-408)||(12761542-12761598)
chr3 (363-407)||(37051295-37051339)
chr3 (356-416)||(47454611-47454671)
chr3 (363-409)||(10445140-10445186)
chr3 (363-408)||(4844512-4844557)
chr3 (363-408)||(4870208-4870253)
chr3 (368-409)||(7975447-7975488)
chr3 (363-416)||(32651439-32651492)
chr3 (363-416)||(36720403-36720456)
chr3 (352-408)||(5499397-5499453)
chr3 (353-409)||(31520596-31520652)
chr3 (365-416)||(2597223-2597274)
chr3 (363-402)||(3427554-3427593)
chr3 (364-415)||(9557343-9557394)
chr3 (363-409)||(8075128-8075174)
chr3 (363-397)||(14186688-14186722)
chr3 (363-397)||(37788466-37788500)
chr3 (363-409)||(44069787-44069833)
chr3 (363-409)||(54990731-54990777)
chr3 (362-399)||(8170711-8170748)
chr3 (363-400)||(10828734-10828771)
chr3 (363-408)||(11642210-11642255)
chr3 (367-408)||(13808890-13808931)
chr3 (363-416)||(16354893-16354946)
chr3 (358-399)||(17108894-17108935)
chr3 (367-416)||(17554793-17554842)
chr3 (363-400)||(17765165-17765202)
chr3 (363-400)||(19066485-19066522)
chr3 (363-396)||(19154673-19154706)
chr3 (363-416)||(21960573-21960626)
chr3 (363-416)||(27093362-27093415)
chr3 (367-400)||(53412983-53413016)
chr3 (367-399)||(16212977-16213009)
chr3 (357-409)||(16900676-16900728)
chr3 (357-397)||(19716238-19716278)
chr3 (382-414)||(31788990-31789022)
chr3 (363-399)||(33899653-33899689)
chr3 (352-400)||(35111218-35111266)
chr3 (357-409)||(40268518-40268569)
chr3 (352-416)||(47236961-47237025)
chr3 (367-399)||(49452912-49452944)
[»] chr7 (52 HSPs)
chr7 (358-416)||(48771960-48772018)
chr7 (363-416)||(26459411-26459464)
chr7 (352-416)||(11720950-11721014)
chr7 (357-408)||(22760893-22760944)
chr7 (352-415)||(49050481-49050544)
chr7 (358-416)||(15905670-15905727)
chr7 (363-409)||(17041013-17041059)
chr7 (365-414)||(37233575-37233624)
chr7 (363-416)||(43215206-43215259)
chr7 (363-416)||(45709709-45709762)
chr7 (360-416)||(25590633-25590689)
chr7 (352-416)||(43590929-43590993)
chr7 (363-409)||(5934150-5934196)
chr7 (363-409)||(9608630-9608676)
chr7 (363-409)||(9836202-9836248)
chr7 (351-397)||(18056764-18056810)
chr7 (363-417)||(20335832-20335886)
chr7 (363-409)||(29785302-29785348)
chr7 (356-406)||(29916802-29916852)
chr7 (363-408)||(8108611-8108656)
chr7 (363-408)||(21877838-21877883)
chr7 (363-408)||(23552148-23552193)
chr7 (358-407)||(37473645-37473694)
chr7 (363-416)||(39631866-39631919)
chr7 (360-416)||(24513819-24513875)
chr7 (360-416)||(30579357-30579413)
chr7 (356-416)||(37085543-37085603)
chr7 (367-414)||(279959-280005)
chr7 (365-408)||(7801210-7801253)
chr7 (363-402)||(9183192-9183231)
chr7 (358-397)||(25132374-25132413)
chr7 (367-414)||(26703149-26703196)
chr7 (358-397)||(31835233-31835272)
chr7 (353-416)||(42711980-42712043)
chr7 (363-409)||(18363725-18363771)
chr7 (370-416)||(21854570-21854616)
chr7 (366-408)||(41519268-41519310)
chr7 (363-408)||(3174957-3175002)
chr7 (368-409)||(5579240-5579281)
chr7 (363-408)||(15137583-15137628)
chr7 (363-408)||(25655229-25655274)
chr7 (363-416)||(33222392-33222445)
chr7 (352-409)||(38374589-38374646)
chr7 (363-416)||(39499720-39499773)
chr7 (371-408)||(42262104-42262141)
chr7 (352-409)||(48125165-48125221)
chr7 (363-407)||(13106783-13106826)
chr7 (372-416)||(25021345-25021389)
chr7 (381-409)||(34898482-34898510)
chr7 (363-407)||(37693692-37693735)
chr7 (376-416)||(45976937-45976977)
chr7 (372-408)||(48716310-48716346)
[»] chr4 (42 HSPs)
chr4 (363-416)||(38869790-38869843)
chr4 (353-409)||(39509099-39509155)
chr4 (363-416)||(37109352-37109405)
chr4 (363-414)||(23377980-23378031)
chr4 (363-416)||(7949455-7949508)
chr4 (356-416)||(30938213-30938273)
chr4 (363-409)||(37274460-37274506)
chr4 (363-409)||(46329193-46329239)
chr4 (363-416)||(7292799-7292852)
chr4 (363-408)||(28635726-28635771)
chr4 (363-416)||(31759659-31759712)
chr4 (352-397)||(46295138-46295183)
chr4 (363-416)||(49576895-49576948)
chr4 (363-416)||(51250523-51250576)
chr4 (357-409)||(32992641-32992693)
chr4 (358-414)||(37720210-37720266)
chr4 (353-409)||(37980139-37980194)
chr4 (352-416)||(49262674-49262738)
chr4 (357-397)||(56440442-56440482)
chr4 (363-414)||(5450117-5450168)
chr4 (357-416)||(19238572-19238631)
chr4 (363-409)||(2622396-2622442)
chr4 (363-409)||(4249206-4249252)
chr4 (363-409)||(8030205-8030251)
chr4 (362-408)||(12821998-12822044)
chr4 (363-417)||(13265109-13265163)
chr4 (360-409)||(24991553-24991605)
chr4 (363-409)||(31826638-31826684)
chr4 (358-408)||(47044747-47044797)
chr4 (352-397)||(5795399-5795444)
chr4 (363-404)||(7539624-7539665)
chr4 (367-416)||(16581715-16581764)
chr4 (363-416)||(19680789-19680842)
chr4 (363-416)||(24234667-24234720)
chr4 (363-416)||(33619228-33619281)
chr4 (363-404)||(42815695-42815736)
chr4 (363-408)||(43623445-43623490)
chr4 (363-416)||(55427201-55427254)
chr4 (367-403)||(43728430-43728466)
chr4 (360-416)||(46545733-46545789)
chr4 (365-397)||(51622526-51622558)
chr4 (352-408)||(52254394-52254450)
[»] chr1 (50 HSPs)
chr1 (363-416)||(52336775-52336828)
chr1 (363-415)||(15786321-15786373)
chr1 (363-416)||(8177183-8177236)
chr1 (363-416)||(33700774-33700827)
chr1 (357-416)||(19528322-19528381)
chr1 (363-409)||(2799891-2799937)
chr1 (363-409)||(9117148-9117194)
chr1 (363-416)||(31383799-31383852)
chr1 (363-409)||(6122823-6122869)
chr1 (363-416)||(6650617-6650670)
chr1 (367-416)||(9165200-9165249)
chr1 (351-408)||(9964468-9964525)
chr1 (363-408)||(12587300-12587345)
chr1 (363-416)||(36371492-36371545)
chr1 (363-416)||(51703801-51703854)
chr1 (363-408)||(51814524-51814569)
chr1 (363-399)||(3265963-3265999)
chr1 (360-416)||(16893416-16893472)
chr1 (356-404)||(27223124-27223172)
chr1 (352-416)||(30689034-30689098)
chr1 (363-399)||(38947473-38947509)
chr1 (363-407)||(40810498-40810542)
chr1 (371-407)||(41508862-41508898)
chr1 (376-416)||(44046162-44046202)
chr1 (352-416)||(52116771-52116835)
chr1 (363-414)||(4566572-4566623)
chr1 (351-410)||(26232350-26232409)
chr1 (347-409)||(15581127-15581188)
chr1 (358-408)||(16169974-16170024)
chr1 (363-397)||(19940873-19940907)
chr1 (363-408)||(521248-521293)
chr1 (363-400)||(1247151-1247188)
chr1 (363-408)||(8904444-8904489)
chr1 (371-416)||(9643818-9643863)
chr1 (352-421)||(24047092-24047161)
chr1 (363-408)||(24217001-24217045)
chr1 (352-409)||(31605838-31605895)
chr1 (363-416)||(37400296-37400349)
chr1 (352-397)||(43446004-43446049)
chr1 (352-397)||(45266875-45266920)
chr1 (359-416)||(46146264-46146321)
chr1 (357-409)||(952540-952592)
chr1 (363-399)||(1600293-1600329)
chr1 (363-415)||(9879461-9879513)
chr1 (363-411)||(12370190-12370238)
chr1 (357-409)||(17297013-17297065)
chr1 (364-396)||(21392879-21392911)
chr1 (351-411)||(39966120-39966180)
chr1 (368-408)||(47753744-47753784)
chr1 (357-397)||(52029932-52029972)
[»] scaffold0291 (1 HSPs)
scaffold0291 (354-404)||(2462-2512)
[»] scaffold0299 (1 HSPs)
scaffold0299 (363-416)||(11550-11603)
[»] scaffold0194 (1 HSPs)
scaffold0194 (363-416)||(13047-13100)
[»] chr5 (24 HSPs)
chr5 (352-409)||(84853-84910)
chr5 (360-416)||(21549135-21549191)
chr5 (353-416)||(22020853-22020916)
chr5 (363-416)||(30109309-30109362)
chr5 (363-416)||(37258367-37258420)
chr5 (363-416)||(43442218-43442271)
chr5 (353-416)||(30883189-30883252)
chr5 (363-409)||(14285190-14285236)
chr5 (363-408)||(87424-87469)
chr5 (367-416)||(12883862-12883911)
chr5 (363-408)||(16773837-16773882)
chr5 (363-416)||(25627079-25627132)
chr5 (363-416)||(29075803-29075856)
chr5 (363-416)||(34984828-34984881)
chr5 (360-416)||(16436640-16436695)
chr5 (352-416)||(16457832-16457896)
chr5 (360-416)||(18595999-18596055)
chr5 (368-416)||(29692392-29692440)
chr5 (363-414)||(25979194-25979245)
chr5 (363-397)||(3584686-3584720)
chr5 (353-407)||(24895066-24895120)
chr5 (371-408)||(14495814-14495851)
chr5 (363-399)||(17028265-17028301)
chr5 (381-409)||(17761374-17761402)
[»] chr2 (35 HSPs)
chr2 (363-416)||(42327396-42327449)
chr2 (352-416)||(21213791-21213855)
chr2 (357-416)||(37480097-37480156)
chr2 (358-416)||(29503293-29503351)
chr2 (363-408)||(12994377-12994422)
chr2 (355-408)||(39715022-39715075)
chr2 (352-416)||(23052513-23052577)
chr2 (363-414)||(4262303-4262354)
chr2 (363-416)||(12086130-12086183)
chr2 (363-416)||(16918579-16918632)
chr2 (363-400)||(40416391-40416428)
chr2 (363-399)||(21195677-21195713)
chr2 (360-416)||(30410547-30410603)
chr2 (363-407)||(33582004-33582048)
chr2 (352-399)||(17737614-17737661)
chr2 (363-409)||(8192481-8192526)
chr2 (363-397)||(13803536-13803570)
chr2 (363-409)||(14500306-14500352)
chr2 (363-409)||(28194263-28194308)
chr2 (363-416)||(42922436-42922490)
chr2 (363-408)||(3001409-3001454)
chr2 (363-408)||(4438980-4439025)
chr2 (363-416)||(11251109-11251162)
chr2 (363-408)||(19244139-19244184)
chr2 (366-407)||(25637182-25637223)
chr2 (352-409)||(26482122-26482178)
chr2 (363-408)||(28846721-28846766)
chr2 (352-409)||(30359683-30359739)
chr2 (363-404)||(34041589-34041630)
chr2 (352-397)||(41908628-41908673)
chr2 (363-416)||(42602576-42602629)
chr2 (357-409)||(6099514-6099565)
chr2 (352-416)||(7799025-7799089)
chr2 (363-403)||(31573642-31573682)
chr2 (367-399)||(33839265-33839297)
[»] chr8 (35 HSPs)
chr8 (353-416)||(19703478-19703541)
chr8 (363-416)||(968384-968437)
chr8 (363-416)||(3624602-3624655)
chr8 (363-416)||(16852362-16852415)
chr8 (363-416)||(35690065-35690118)
chr8 (352-416)||(2203514-2203578)
chr8 (363-414)||(6569772-6569823)
chr8 (363-409)||(11819805-11819851)
chr8 (363-409)||(27750759-27750805)
chr8 (357-403)||(36205230-36205276)
chr8 (367-416)||(6536542-6536591)
chr8 (363-416)||(18540320-18540373)
chr8 (367-408)||(23361654-23361695)
chr8 (363-416)||(28783082-28783135)
chr8 (363-416)||(29431033-29431086)
chr8 (363-416)||(29858050-29858103)
chr8 (357-408)||(28750600-28750651)
chr8 (352-395)||(28787486-28787529)
chr8 (363-414)||(33017238-33017289)
chr8 (363-414)||(34628666-34628717)
chr8 (367-409)||(26688894-26688936)
chr8 (363-409)||(44780115-44780161)
chr8 (367-416)||(4830509-4830558)
chr8 (363-416)||(7140731-7140784)
chr8 (363-416)||(8485021-8485074)
chr8 (363-416)||(8794346-8794399)
chr8 (363-416)||(11492074-11492127)
chr8 (363-400)||(22193365-22193402)
chr8 (360-405)||(24675510-24675555)
chr8 (367-416)||(30483889-30483938)
chr8 (363-407)||(3305189-3305233)
chr8 (357-409)||(3524396-3524448)
chr8 (364-416)||(12988450-12988502)
chr8 (360-416)||(30774734-30774790)
chr8 (363-395)||(33727874-33727906)
[»] chr6 (21 HSPs)
chr6 (353-416)||(10338165-10338228)
chr6 (363-408)||(6385892-6385937)
chr6 (363-416)||(33549126-33549179)
chr6 (365-408)||(23910114-23910157)
chr6 (363-409)||(20213070-20213116)
chr6 (363-409)||(22107093-22107139)
chr6 (360-397)||(4105092-4105129)
chr6 (363-416)||(12188304-12188357)
chr6 (363-416)||(28363959-28364012)
chr6 (363-416)||(30127422-30127475)
chr6 (363-415)||(14278112-14278164)
chr6 (368-416)||(31622997-31623045)
chr6 (353-408)||(11423596-11423651)
chr6 (358-416)||(14446217-14446275)
chr6 (362-415)||(8639129-8639182)
chr6 (363-408)||(24641191-24641236)
chr6 (363-415)||(11103436-11103488)
chr6 (363-399)||(14199948-14199984)
chr6 (363-407)||(17149586-17149629)
chr6 (352-416)||(21418492-21418556)
chr6 (363-415)||(34786455-34786507)
[»] scaffold0258 (1 HSPs)
scaffold0258 (363-416)||(15324-15377)
[»] scaffold0009 (1 HSPs)
scaffold0009 (363-416)||(19848-19901)
[»] scaffold1367 (1 HSPs)
scaffold1367 (363-416)||(841-894)
[»] scaffold0180 (1 HSPs)
scaffold0180 (363-416)||(19963-20016)
[»] scaffold0002 (1 HSPs)
scaffold0002 (367-416)||(94976-95025)
[»] scaffold0300 (1 HSPs)
scaffold0300 (363-409)||(4369-4415)
[»] scaffold0517 (1 HSPs)
scaffold0517 (363-416)||(7727-7780)
[»] scaffold0126 (1 HSPs)
scaffold0126 (363-416)||(25348-25401)
[»] scaffold0101 (1 HSPs)
scaffold0101 (363-416)||(43333-43386)
[»] scaffold0044 (1 HSPs)
scaffold0044 (363-408)||(92977-93022)
[»] scaffold0021 (1 HSPs)
scaffold0021 (360-416)||(156987-157041)
[»] scaffold0004 (1 HSPs)
scaffold0004 (358-407)||(81560-81609)
[»] scaffold0122 (1 HSPs)
scaffold0122 (364-416)||(6921-6973)
[»] scaffold0032 (1 HSPs)
scaffold0032 (363-415)||(112305-112357)


Alignment Details
Target: chr3 (Bit Score: 342; Significance: 0; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 11 - 454
Target Start/End: Original strand, 47279054 - 47279496
Alignment:
Q  11 aggtaagcactaacatggtaacgatacatatgaaagaaaagtgcattatcgagttggatctcactggtggaggagttcgaggtgcaaagaaaagaatacg 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47279054 aggtaagcactaacatggtaacgatacatatgaaagaaaagtgcattatcgagttggatctcactggtggaggagttcgaggtgcaaagaaaagaatacg 47279153  T
Q  111 acattgatatgtgacaatcaaggtcnnnnnnnngaaaggaaggtcgttaatattannnnnnnaaggaaggaaggtcgttaatattgtgtttggcatatgc 210  Q
    |||||||||||||| ||||||||||        |||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  47279154 acattgatatgtgataatcaaggtcttttttttgaaaggaaggtcgttaatattttttttttaaggaaggaaggtcgttaatattgtgtttggcatatgc 47279253  T
Q  211 gattgaaacaaacaggtctataactatattgatgtaaatagtctataatttagattaaattagttattcaatgaataaaaaatttgttttttgtttatga 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47279254 gattgaaacaaacaggtctataactatattgatgtaaatagtctataatttagattaaattagttattcaatgaataaaaaatttgttttttgtttatga 47279353  T
Q  311 taatgatcaaaaggcgtatataattatcnnnnnnngaatcagcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagca 410  Q
    |||||||||||||||||||||||||||        |||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  47279354 taatgatcaaaaggcgtatataattat-tttttttgaattagcattggggaaaatcgaacatgagaccttaaggaggagcacactcccagatcccaagca 47279452  T
Q  411 aataccttgaggagtatataattatctagtttgttactttttcc 454  Q
    |||||||||||||||||||||||||||||||||||  |||||||    
T  47279453 aataccttgaggagtatataattatctagtttgttgttttttcc 47279496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 363 - 409
Target Start/End: Complemental strand, 30311381 - 30311335
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  30311381 aatcgaacctgagaccttgaggaggagcacactcccagatcccaagc 30311335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 44743845 - 44743902
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    ||||||| || |||||||||||||||||  ||||||||||||||||||||||||||||    
T  44743845 gcactggagataatcgaacctgagacctcgaggaggagcacactcccagatcccaagc 44743902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 364 - 408
Target Start/End: Complemental strand, 11612373 - 11612329
Alignment:
Q  364 atcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  11612373 atcgaacctgagaccttaaggaggagcacactcccagctcccaag 11612329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 352 - 416
Target Start/End: Complemental strand, 14339696 - 14339632
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||| |||| ||||||||||||||| || |||||||||||||||||| ||||||||| ||||||    
T  14339696 gcactagggagaatcgaacctgagacattgaggaggagcacactcccaaatcccaagccaatacc 14339632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 407
Target Start/End: Complemental strand, 20501782 - 20501727
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaa 407  Q
    ||||||| || |||||||||||||||||||||||||||||||||| ||| ||||||    
T  20501782 gcactggagagaatcgaacctgagaccttaaggaggagcacactctcaggtcccaa 20501727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 363 - 414
Target Start/End: Original strand, 28703405 - 28703456
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaata 414  Q
    |||||||||||||||||| | |||||||||||||||||||||||||| ||||    
T  28703405 aatcgaacctgagaccttgaagaggagcacactcccagatcccaagctaata 28703456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 415
Target Start/End: Complemental strand, 40063705 - 40063642
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatac 415  Q
    ||||||| || |||||||| |||||||||||||||||||| |||| |||||||||||| |||||    
T  40063705 gcactggagagaatcgaacttgagaccttaaggaggagcatactctcagatcccaagccaatac 40063642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 363 - 409
Target Start/End: Original strand, 15048062 - 15048108
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||    
T  15048062 aatcgaacctgagaccttgaggaggagcacattcccagatcccaagc 15048108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 363 - 405
Target Start/End: Original strand, 52769984 - 52770026
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatccc 405  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  52769984 aatcgaacctgagacctcaaggaggagcacactcccagatccc 52770026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 2667937 - 2667884
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||||  |||| ||||||||||||||||||||||| ||||||    
T  2667937 aatcgaacctgagacctcgaggaagagcacactcccagatcccaagccaatacc 2667884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 4222216 - 4222163
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||| |||| || |||||||||||||||||||||||||||| ||||||    
T  4222216 aatcgaacctaagactttgaggaggagcacactcccagatcccaagccaatacc 4222163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 10499110 - 10499163
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||||    
T  10499110 aatcgaacctgagacctcaaggaagagcagactcccagatcccaagccaatacc 10499163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 39253772 - 39253727
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||||||||||||||||| | |||||||||||||||||||||||||    
T  39253772 aatcgaacctgagaccttgaagaggagcacactcccagatcccaag 39253727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 46518703 - 46518650
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||| ||||||| ||||| |||||||||||||||||||||||||||| ||||||    
T  46518703 aatcaaacctgaaaccttgaggaggagcacactcccagatcccaagccaatacc 46518650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 51903879 - 51903932
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||||||||||||||   |||||||||||||||||||||||||||| ||||||    
T  51903879 aatcgaacctgagaccacgaggaggagcacactcccagatcccaagccaatacc 51903932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 408
Target Start/End: Complemental strand, 12761598 - 12761542
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||| |||||||||||||||||||| || |||||||| ||||||||||| |||||||    
T  12761598 gcaccggggaaaatcgaacctgagagctcaaggaggaacacactcccaggtcccaag 12761542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 407
Target Start/End: Original strand, 37051295 - 37051339
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaa 407  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||    
T  37051295 aatcgaacctgagactttaaggaggaacacactcccagatcccaa 37051339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 416
Target Start/End: Original strand, 47454611 - 47454671
Alignment:
Q  356 tggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||| |||||||||||||||||  |||||||||||||||| ||||| ||||| ||||||    
T  47454611 tggggagaatcgaacctgagacctcgaggaggagcacactccaagatctcaagccaatacc 47454671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 409
Target Start/End: Original strand, 10445140 - 10445186
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||||||||||||||||  ||||||||||||||||||| ||||||||    
T  10445140 aatcgaacctgagacctcgaggaggagcacactcccaggtcccaagc 10445186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 408
Target Start/End: Original strand, 4844512 - 4844557
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||||| ||||||||||  |||||||||||||||||||||||||||    
T  4844512 aatcgatcctgagacctcgaggaggagcacactcccagatcccaag 4844557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 408
Target Start/End: Original strand, 4870208 - 4870253
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||||| ||||||||||  |||||||||||||||||||||||||||    
T  4870208 aatcgatcctgagacctcgaggaggagcacactcccagatcccaag 4870253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 368 - 409
Target Start/End: Complemental strand, 7975488 - 7975447
Alignment:
Q  368 aacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    ||||| ||||||| ||||||||||||||||||||||||||||    
T  7975488 aacctaagaccttgaggaggagcacactcccagatcccaagc 7975447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 32651439 - 32651492
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||||| |||||| ||| ||||||||||||||||||| |||||||| ||||||    
T  32651439 aatcgaatctgagatcttgaggaggagcacactcccaggtcccaagccaatacc 32651492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 36720456 - 36720403
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||| ||||  |||||||||||||||||| ||||||||| ||||||    
T  36720456 aatcgaacctgaaacctcgaggaggagcacactcccatatcccaagccaatacc 36720403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 408
Target Start/End: Original strand, 5499397 - 5499453
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||| ||||| ||| |||||| ||||||||||||||||||||||| |||||| ||||    
T  5499397 gcaccggggagaatagaaccttagaccttaaggaggagcacactctcagatctcaag 5499453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 409
Target Start/End: Original strand, 31520596 - 31520652
Alignment:
Q  353 cactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||||| || |||| ||||| ||||||  ||||||||||||||||||||||||||||    
T  31520596 cactggagagaatcaaacctaagacctcgaggaggagcacactcccagatcccaagc 31520652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 2597223 - 2597274
Alignment:
Q  365 tcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||||||||||||| ||||||||||||||||| | |||| |||| ||||||    
T  2597223 tcgaacctgagacctcaaggaggagcacactcctaaatccgaagccaatacc 2597274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 402
Target Start/End: Original strand, 3427554 - 3427593
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagat 402  Q
    ||||||| |||||||||| |||||||||||||||||||||    
T  3427554 aatcgaatctgagaccttgaggaggagcacactcccagat 3427593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 415
Target Start/End: Complemental strand, 9557394 - 9557343
Alignment:
Q  364 atcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatac 415  Q
    ||||||||||||| ||  ||||||||||||||| |||||||||||| |||||    
T  9557394 atcgaacctgagatctcgaggaggagcacactctcagatcccaagccaatac 9557343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 409
Target Start/End: Original strand, 8075128 - 8075174
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||||||||||| ||||| ||||||||||||||||||  ||||||||    
T  8075128 aatcgaacctgaaaccttgaggaggagcacactcccaagtcccaagc 8075174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 397
Target Start/End: Complemental strand, 14186722 - 14186688
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcc 397  Q
    |||||||||||||||||| ||||||||||||||||    
T  14186722 aatcgaacctgagaccttgaggaggagcacactcc 14186688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 397
Target Start/End: Original strand, 37788466 - 37788500
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcc 397  Q
    |||||||||||||||||| ||||||||||||||||    
T  37788466 aatcgaacctgagaccttgaggaggagcacactcc 37788500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 409
Target Start/End: Complemental strand, 44069833 - 44069787
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||| ||||||||||||| |||||||||||||||| ||||| |||||    
T  44069833 aatcaaacctgagaccttgaggaggagcacactccaagatctcaagc 44069787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 409
Target Start/End: Complemental strand, 54990777 - 54990731
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||||||||||||||||| ||||||||||| |||| || ||||||||    
T  54990777 aatcgaacctgagaccttgaggaggagcacgctccaaggtcccaagc 54990731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 399
Target Start/End: Complemental strand, 8170748 - 8170711
Alignment:
Q  362 aaatcgaacctgagaccttaaggaggagcacactccca 399  Q
    ||||||||||||||||||| || |||||||||||||||    
T  8170748 aaatcgaacctgagaccttgagtaggagcacactccca 8170711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 400
Target Start/End: Original strand, 10828734 - 10828771
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccag 400  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  10828734 aatcgaacctgagaccttaagtaggagcatactcccag 10828771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 408
Target Start/End: Original strand, 11642210 - 11642255
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||||||||||||||||| ||||||| |||| || |||||||||||    
T  11642210 aatcgaacctgagaccttgaggaggatcacaatctcagatcccaag 11642255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 408
Target Start/End: Original strand, 13808890 - 13808931
Alignment:
Q  367 gaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||||||||||||  |||||||||||||| ||||||||||||    
T  13808890 gaacctgagacctagaggaggagcacactgccagatcccaag 13808931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 16354893 - 16354946
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||| | ||||||||||||||| ||| | |||||| ||||||    
T  16354893 aatcgaacctgagaccctgaggaggagcacactcacaggttccaagccaatacc 16354946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 399
Target Start/End: Original strand, 17108894 - 17108935
Alignment:
Q  358 gggaaaatcgaacctgagaccttaaggaggagcacactccca 399  Q
    |||| |||| ||||||||||||| ||||||||||||||||||    
T  17108894 gggagaatcaaacctgagaccttgaggaggagcacactccca 17108935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 416
Target Start/End: Complemental strand, 17554842 - 17554793
Alignment:
Q  367 gaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||||||| |||| |||| |||||||||||||| |||||||| ||||||    
T  17554842 gaacctgagcccttgaggaagagcacactcccaggtcccaagccaatacc 17554793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 400
Target Start/End: Complemental strand, 17765202 - 17765165
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccag 400  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  17765202 aatcgaacctgagatcttgaggaggagcacactcccag 17765165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 400
Target Start/End: Complemental strand, 19066522 - 19066485
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccag 400  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  19066522 aatcgaacctgagatcttgaggaggagcacactcccag 19066485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 396
Target Start/End: Complemental strand, 19154706 - 19154673
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactc 396  Q
    |||||||||||||||||| |||||||||||||||    
T  19154706 aatcgaacctgagacctttaggaggagcacactc 19154673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 21960626 - 21960573
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||||| |||||||||  ||||||||||||||| ||| |||||||| ||||||    
T  21960626 aatcgaatctgagacctcgaggaggagcacactctcaggtcccaagccaatacc 21960573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 27093362 - 27093415
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||| ||||||||||||| ||||||||||||||||||  | |||||| ||||||    
T  27093362 aatcaaacctgagaccttgaggaggagcacactcccaagttccaagccaatacc 27093415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 400
Target Start/End: Complemental strand, 53413016 - 53412983
Alignment:
Q  367 gaacctgagaccttaaggaggagcacactcccag 400  Q
    |||||||||||||| |||||||||||||||||||    
T  53413016 gaacctgagaccttgaggaggagcacactcccag 53412983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 399
Target Start/End: Original strand, 16212977 - 16213009
Alignment:
Q  367 gaacctgagaccttaaggaggagcacactccca 399  Q
    |||| ||||||||||||||||||||||||||||    
T  16212977 gaacttgagaccttaaggaggagcacactccca 16213009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 409
Target Start/End: Original strand, 16900676 - 16900728
Alignment:
Q  357 ggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    ||||| |||||||| ||||||||| | |||||||||||||| || ||||||||    
T  16900676 ggggagaatcgaacatgagaccttgacgaggagcacactccaaggtcccaagc 16900728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 397
Target Start/End: Complemental strand, 19716278 - 19716238
Alignment:
Q  357 ggggaaaatcgaacctgagaccttaaggaggagcacactcc 397  Q
    ||||| ||||||||| |||||||| ||||||||||||||||    
T  19716278 ggggagaatcgaaccagagaccttgaggaggagcacactcc 19716238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 414
Target Start/End: Original strand, 31788990 - 31789022
Alignment:
Q  382 aggaggagcacactcccagatcccaagcaaata 414  Q
    |||||||||||||||||||||||||||| ||||    
T  31788990 aggaggagcacactcccagatcccaagccaata 31789022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 399
Target Start/End: Complemental strand, 33899689 - 33899653
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactccca 399  Q
    |||||||||||||||||  ||||||||||||||||||    
T  33899689 aatcgaacctgagacctagaggaggagcacactccca 33899653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 400
Target Start/End: Complemental strand, 35111266 - 35111218
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcccag 400  Q
    ||||| ||||||||||||| ||||||||  |||| ||||||||||||||    
T  35111266 gcactagggaaaatcgaacatgagacctcgaggatgagcacactcccag 35111218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 409
Target Start/End: Complemental strand, 40268569 - 40268518
Alignment:
Q  357 ggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    ||||| |||||||||||||||||||| ||||||| |||||| || ||||||||    
T  40268569 ggggagaatcgaacctgagaccttaa-gaggagcccactccaaggtcccaagc 40268518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 416
Target Start/End: Original strand, 47236961 - 47237025
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||| ||||| |||||||| ||||||||| | ||||||||||||||| | |||||| | ||||||    
T  47236961 gcaccggggagaatcgaacatgagaccttgaagaggagcacactcccgggtcccaaaccaatacc 47237025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 399
Target Start/End: Complemental strand, 49452944 - 49452912
Alignment:
Q  367 gaacctgagaccttaaggaggagcacactccca 399  Q
    |||||||||||||| ||||||||||||||||||    
T  49452944 gaacctgagaccttgaggaggagcacactccca 49452912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 358 - 416
Target Start/End: Complemental strand, 48772018 - 48771960
Alignment:
Q  358 gggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  48772018 gggataatcgaacctgagacctcaaggaggagcacactcccagatcccaagccaatacc 48771960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 26459411 - 26459464
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||| ||||||    
T  26459411 aatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaatacc 26459464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 352 - 416
Target Start/End: Original strand, 11720950 - 11721014
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||| ||||||| |||| |||||||||||||||||| |||||| |||||||| ||||||    
T  11720950 gcactggggagaatcgaatctgataccttaaggaggagcacattcccaggtcccaagccaatacc 11721014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 357 - 408
Target Start/End: Complemental strand, 22760944 - 22760893
Alignment:
Q  357 ggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    ||||| |||||||||||||||||| ||||||||||||||||||| |||||||    
T  22760944 ggggagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaag 22760893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 415
Target Start/End: Original strand, 49050481 - 49050544
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatac 415  Q
    |||| ||||| ||||||||||||||||| ||||||||| |||||| |||||||||||| |||||    
T  49050481 gcaccggggagaatcgaacctgagacctcaaggaggagtacactcgcagatcccaagctaatac 49050544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 358 - 416
Target Start/End: Original strand, 15905670 - 15905727
Alignment:
Q  358 gggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||| ||||||||||||||||| |||||||||||||||||||| |||||||| ||||||    
T  15905670 gggagaatcgaacctgagacct-aaggaggagcacactcccaggtcccaagccaatacc 15905727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 363 - 409
Target Start/End: Original strand, 17041013 - 17041059
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||    
T  17041013 aatcgaacctgagaccttgaggaggagcacacttccagatcccaagc 17041059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 365 - 414
Target Start/End: Original strand, 37233575 - 37233624
Alignment:
Q  365 tcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaata 414  Q
    |||| |||||||||||||||||||||||||||||| ||||||||| ||||    
T  37233575 tcgaccctgagaccttaaggaggagcacactcccacatcccaagccaata 37233624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 43215259 - 43215206
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||||| |||||||||||||||| || |||||||| ||||||    
T  43215259 aatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaatacc 43215206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 45709709 - 45709762
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||||  ||||||||||||||| |||||||||||| ||||||    
T  45709709 aatcgaacctgagacctcgaggaggagcacactctcagatcccaagctaatacc 45709762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 416
Target Start/End: Complemental strand, 25590689 - 25590633
Alignment:
Q  360 gaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||| |||||||  |||||||||||||||||||||| ||||| ||||||    
T  25590689 gaaaatcgaacccgagacctcgaggaggagcacactcccagatctcaagccaatacc 25590633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 416
Target Start/End: Complemental strand, 43590993 - 43590929
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||| |||| ||||||||||||||| || ||||||||||||||||||  |||||||| ||||||    
T  43590993 gcactagggagaatcgaacctgagacattgaggaggagcacactcccaagtcccaagccaatacc 43590929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 409
Target Start/End: Complemental strand, 5934196 - 5934150
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||||||| ||| |||| |||||||||||||||||||||||||||||    
T  5934196 aatcgaacatgaaacctcaaggaggagcacactcccagatcccaagc 5934150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 409
Target Start/End: Original strand, 9608630 - 9608676
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||||||||||||| ||| |||||||| |||||||||||||||||||    
T  9608630 aatcgaacctgagatcttgaggaggaggacactcccagatcccaagc 9608676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 409
Target Start/End: Original strand, 9836202 - 9836248
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||||||||||||| ||| |||||||| |||||||||||||||||||    
T  9836202 aatcgaacctgagatcttgaggaggaggacactcccagatcccaagc 9836248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 397
Target Start/End: Original strand, 18056764 - 18056810
Alignment:
Q  351 agcactggggaaaatcgaacctgagaccttaaggaggagcacactcc 397  Q
    ||||| ||||| |||||||||||||||||| ||||||||||||||||    
T  18056764 agcaccggggagaatcgaacctgagaccttcaggaggagcacactcc 18056810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 417
Target Start/End: Original strand, 20335832 - 20335886
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacct 417  Q
    |||||||||||||||||  ||||||||||||||||||  |||||||| |||||||    
T  20335832 aatcgaacctgagacctcgaggaggagcacactcccaagtcccaagccaatacct 20335886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 409
Target Start/End: Original strand, 29785302 - 29785348
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||||||| ||||||||| |||||||||||||| |||||||||||||    
T  29785302 aatcgaacatgagaccttgaggaggagcacacttccagatcccaagc 29785348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 406
Target Start/End: Original strand, 29916802 - 29916852
Alignment:
Q  356 tggggaaaatcgaacctgagaccttaaggaggagcacactcccagatccca 406  Q
    |||||| |||||||||||||||||| |||||||||||||||  ||||||||    
T  29916802 tggggagaatcgaacctgagaccttgaggaggagcacactcttagatccca 29916852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 8108656 - 8108611
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    ||||||||||||||||| |||||||||| |||||||| ||||||||    
T  8108656 aatcgaacctgagacctcaaggaggagcgcactcccatatcccaag 8108611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 21877883 - 21877838
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||||||| ||||||||||||||||||||| ||||||| |||||||    
T  21877883 aatcgaacgtgagaccttaaggaggagcaccctcccaggtcccaag 21877838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 23552193 - 23552148
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||||||| ||||||||| ||||||||||||||||||| |||||||    
T  23552193 aatcgaacttgagaccttgaggaggagcacactcccaggtcccaag 23552148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 358 - 407
Target Start/End: Complemental strand, 37473694 - 37473645
Alignment:
Q  358 gggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaa 407  Q
    |||| ||||||||||||||||| ||||||||||| ||||| |||||||||    
T  37473694 gggagaatcgaacctgagacctcaaggaggagcaaactcctagatcccaa 37473645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 39631919 - 39631866
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||||| |||||||||  |||||||| |||||||| ||||||    
T  39631919 aatcgaacctgagaccttgaggaggagcttactcccaggtcccaagccaatacc 39631866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 416
Target Start/End: Complemental strand, 24513875 - 24513819
Alignment:
Q  360 gaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||||||| |||||| || ||||||||| ||| ||||| ||||||    
T  24513875 gaaaatcgaacctgagacctcaaggagaagtacactcccaaatctcaagccaatacc 24513819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 416
Target Start/End: Complemental strand, 30579413 - 30579357
Alignment:
Q  360 gaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||||||||||||||||||| |||||| | |||||||||| || ||||| ||||||    
T  30579413 gaaaatcgaacctgagaccttgaggaggtggacactcccaggtctcaagccaatacc 30579357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 416
Target Start/End: Original strand, 37085543 - 37085603
Alignment:
Q  356 tggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||| |||||||||||| ||||  |||| ||||||||||||| ||||||||| ||||||    
T  37085543 tggggagaatcgaacctgaaacctcgaggatgagcacactcccaaatcccaagccaatacc 37085603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 414
Target Start/End: Original strand, 279959 - 280005
Alignment:
Q  367 gaacctgagaccttaaggaggagcacactcccagatcccaagcaaata 414  Q
    ||||||||||||||||||||||| ||||||||| ||||||||| ||||    
T  279959 gaacctgagaccttaaggaggagtacactccca-atcccaagccaata 280005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 408
Target Start/End: Complemental strand, 7801253 - 7801210
Alignment:
Q  365 tcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||||||||||||||| | ||||||||||||||||| |||||||    
T  7801253 tcgaacctgagaccttgaagaggagcacactcccaggtcccaag 7801210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 402
Target Start/End: Original strand, 9183192 - 9183231
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagat 402  Q
    ||||||||||||||| || |||||||||||||||||||||    
T  9183192 aatcgaacctgagactttgaggaggagcacactcccagat 9183231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 397
Target Start/End: Original strand, 25132374 - 25132413
Alignment:
Q  358 gggaaaatcgaacctgagaccttaaggaggagcacactcc 397  Q
    |||| ||||||||||||||||||||| |||||||||||||    
T  25132374 gggagaatcgaacctgagaccttaagaaggagcacactcc 25132413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 414
Target Start/End: Complemental strand, 26703196 - 26703149
Alignment:
Q  367 gaacctgagaccttaaggaggagcacactcccagatcccaagcaaata 414  Q
    |||||||||||||  || ||||||||||||||||||||||||| ||||    
T  26703196 gaacctgagacctcgagaaggagcacactcccagatcccaagccaata 26703149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 397
Target Start/End: Complemental strand, 31835272 - 31835233
Alignment:
Q  358 gggaaaatcgaacctgagaccttaaggaggagcacactcc 397  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  31835272 gggataatcgaacctgagaccttgaggaggagcacactcc 31835233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 416
Target Start/End: Complemental strand, 42712043 - 42711980
Alignment:
Q  353 cactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||| |||| |||||||| ||||||||| ||||||||||||||||||  | |||||| ||||||    
T  42712043 cactagggagaatcgaacatgagaccttgaggaggagcacactcccatgtaccaagctaatacc 42711980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 409
Target Start/End: Complemental strand, 18363771 - 18363725
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||| ||||||||||||| |||||||||||||||||| ||| |||||    
T  18363771 aatcaaacctgagaccttgaggaggagcacactcccaaatctcaagc 18363725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 416
Target Start/End: Complemental strand, 21854616 - 21854570
Alignment:
Q  370 cctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||| || |||||||||||||||||||||||| ||| ||||||    
T  21854616 cctgagactttgaggaggagcacactcccagatccctagccaatacc 21854570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 366 - 408
Target Start/End: Original strand, 41519268 - 41519310
Alignment:
Q  366 cgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    ||||||||||||||| |||||||||||||||| | ||||||||    
T  41519268 cgaacctgagaccttgaggaggagcacactcctaaatcccaag 41519310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 3175002 - 3174957
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||||||||||||||||  ||  |||||||||||||||||||||||    
T  3175002 aatcgaacctgagacctcgagatggagcacactcccagatcccaag 3174957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 409
Target Start/End: Original strand, 5579240 - 5579281
Alignment:
Q  368 aacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    ||||||||||||| |||||||||||||||| || ||||||||    
T  5579240 aacctgagaccttgaggaggagcacactccaaggtcccaagc 5579281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 15137628 - 15137583
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||| ||||||||||||| |||||||||||||||| | ||||||||    
T  15137628 aatctaacctgagaccttgaggaggagcacactcctaaatcccaag 15137583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 408
Target Start/End: Original strand, 25655229 - 25655274
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||||||||||| ||||| ||||||| ||||||| |||||||||||    
T  25655229 aatcgaacctgaaaccttgaggaggatcacactcacagatcccaag 25655274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 33222445 - 33222392
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||||| |||| ||| ||||| |||| |||||||| ||||||    
T  33222445 aatcgaacctgagaccttgaggatgagtacacttccaggtcccaagccaatacc 33222392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 38374589 - 38374646
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||| ||||| |||||||||| ||||||| |||||||||||||||  || ||||||||    
T  38374589 gcaccggggagaatcgaacctaagaccttgaggaggagcacactctaaggtcccaagc 38374646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 39499720 - 39499773
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||| ||||||||||| ||||| ||||||| ||| |||||||| ||||||    
T  39499720 aatcgaacatgagaccttaaagaggaacacactcacaggtcccaagccaatacc 39499773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 42262104 - 42262141
Alignment:
Q  371 ctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  42262104 ctgagacctttaggaggagcacactctcagatcccaag 42262141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 48125165 - 48125221
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||| ||||||||| ||||||||||||||  ||||||||||||||| || ||||||||    
T  48125165 gcaccggggaaaattgaacctgagacctt-cggaggagcacactccaaggtcccaagc 48125221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 407
Target Start/End: Original strand, 13106783 - 13106826
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaa 407  Q
    |||||||||||||||||| |||||||| ||||| |||||||||||    
T  13106783 aatcgaacctgagaccttgaggaggagtacact-ccagatcccaa 13106826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 416
Target Start/End: Original strand, 25021345 - 25021389
Alignment:
Q  372 tgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||| || ||||||||||||||||||| |||||||| ||||||    
T  25021345 tgagactttgaggaggagcacactcccaggtcccaagccaatacc 25021389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 381 - 409
Target Start/End: Original strand, 34898482 - 34898510
Alignment:
Q  381 aaggaggagcacactcccagatcccaagc 409  Q
    |||||||||||||||||||||||||||||    
T  34898482 aaggaggagcacactcccagatcccaagc 34898510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 407
Target Start/End: Original strand, 37693692 - 37693735
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaa 407  Q
    ||||||||||||||| ||||| ||||||||||||| |||||||||    
T  37693692 aatcgaacctgagacattaag-aggagcacactccaagatcccaa 37693735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 416
Target Start/End: Original strand, 45976937 - 45976977
Alignment:
Q  376 accttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||||||||||||||||||||||| || ||||| ||||||    
T  45976937 accttaaggaggagcacactcccaggtcacaagccaatacc 45976977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 408
Target Start/End: Complemental strand, 48716346 - 48716310
Alignment:
Q  372 tgagaccttaaggaggagcacactcccagatcccaag 408  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  48716346 tgagaccttaaggaggaacacactcccagattccaag 48716310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 5e-17; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 38869843 - 38869790
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  38869843 aatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatacc 38869790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 353 - 409
Target Start/End: Complemental strand, 39509155 - 39509099
Alignment:
Q  353 cactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    ||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||    
T  39509155 cactggggagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagc 39509099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 37109352 - 37109405
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||| ||||||    
T  37109352 aatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaatacc 37109405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 363 - 414
Target Start/End: Complemental strand, 23378031 - 23377980
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaata 414  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||| ||||    
T  23378031 aatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaata 23377980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 7949455 - 7949508
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||||| |||||||||||||||| || |||||||| ||||||    
T  7949455 aatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaatacc 7949508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 416
Target Start/End: Original strand, 30938213 - 30938273
Alignment:
Q  356 tggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||| |||||||||||||||||  |||||||||||||||| ||||||||| | ||||||    
T  30938213 tggggagaatcgaacctgagacctcgaggaggagcacactccaagatcccaaaccaatacc 30938273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 409
Target Start/End: Original strand, 37274460 - 37274506
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  37274460 aatcgaacctaagaccttgaggaggagcacactcccaggtcccaagc 37274506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 409
Target Start/End: Complemental strand, 46329239 - 46329193
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  46329239 aatcgaacctgataccttgaggaggagcacactcccaggtcccaagc 46329193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 7292799 - 7292852
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||||||||||||| || ||||||||||||||||||| | |||||| ||||||    
T  7292799 aatcgaacctgagactttgaggaggagcacactcccaggttccaagccaatacc 7292852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 28635771 - 28635726
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||    
T  28635771 aatcgaacctaagacctccaggaggagcacactcccagatcccaag 28635726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 31759659 - 31759712
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||||| |||||||||| ||||||||||||||||||  |||||||| ||||||    
T  31759659 aatcgaatctgagaccttgaggaggagcacactcccaagtcccaagccaatacc 31759712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 397
Target Start/End: Complemental strand, 46295183 - 46295138
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcc 397  Q
    |||| ||||| |||||||||||||||||| ||||||||||||||||    
T  46295183 gcaccggggagaatcgaacctgagaccttgaggaggagcacactcc 46295138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 49576895 - 49576948
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||||| ||||||||||||||||||  ||| |||| ||||||    
T  49576895 aatcgaacctgagaccttgaggaggagcacactcccaagtccaaagccaatacc 49576948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 51250523 - 51250576
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||| ||||| ||| ||| |||||||||||||||||||||||| ||||||    
T  51250523 aatcgaacttgagatcttgaggcggagcacactcccagatcccaagccaatacc 51250576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 409
Target Start/End: Complemental strand, 32992693 - 32992641
Alignment:
Q  357 ggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    ||||| |||||||| ||||||||| |||||||||||||||| || ||||||||    
T  32992693 ggggagaatcgaacttgagaccttgaggaggagcacactccaaggtcccaagc 32992641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 358 - 414
Target Start/End: Original strand, 37720210 - 37720266
Alignment:
Q  358 gggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaata 414  Q
    |||| ||||||||||| |||||| |||||| |||||||||||| |||||||| ||||    
T  37720210 gggagaatcgaacctgggaccttgaggaggggcacactcccaggtcccaagccaata 37720266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 409
Target Start/End: Original strand, 37980139 - 37980194
Alignment:
Q  353 cactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    ||||||||| |||||||||||||||||| | |||||||||||||| || ||||||||    
T  37980139 cactggggagaatcgaacctgagaccttga-gaggagcacactccaaggtcccaagc 37980194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 416
Target Start/End: Original strand, 49262674 - 49262738
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||| ||||||||||||||||| ||  |||||||||||| ||  |||||||| ||||||    
T  49262674 gcactggggagaatcgaacctgagacctcaacaaggagcacactctcaagtcccaagcgaatacc 49262738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 397
Target Start/End: Complemental strand, 56440482 - 56440442
Alignment:
Q  357 ggggaaaatcgaacctgagaccttaaggaggagcacactcc 397  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  56440482 ggggagaatcgaaccggagaccttaaggaggagcacactcc 56440442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 414
Target Start/End: Complemental strand, 5450168 - 5450117
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaata 414  Q
    ||||||| |||| ||||| ||||||||||||||||||||| |||||| ||||    
T  5450168 aatcgaatctgaaaccttgaggaggagcacactcccagattccaagccaata 5450117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 416
Target Start/End: Original strand, 19238572 - 19238631
Alignment:
Q  357 ggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||| ||||||||| |||||||  ||||||||||||||||||  |||||||| ||||||    
T  19238572 ggggagaatcgaacccgagacctcgaggaggagcacactcccaagtcccaagccaatacc 19238631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 409
Target Start/End: Original strand, 2622396 - 2622442
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    ||||||||||||||| |  ||||||||||||||||||| ||||||||    
T  2622396 aatcgaacctgagacatggaggaggagcacactcccaggtcccaagc 2622442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 409
Target Start/End: Complemental strand, 4249252 - 4249206
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||| ||||||||||||| |||||||||||||||| | |||||||||    
T  4249252 aatcaaacctgagaccttgaggaggagcacactccaaaatcccaagc 4249206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 409
Target Start/End: Original strand, 8030205 - 8030251
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||||||| ||||||||| ||||||||||||||||||  ||||||||    
T  8030205 aatcgaacttgagaccttgaggaggagcacactcccaagtcccaagc 8030251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 408
Target Start/End: Complemental strand, 12822044 - 12821998
Alignment:
Q  362 aaatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||||||| |||||||||| |  ||||||||||||||||||||||||    
T  12822044 aaatcgaatctgagaccttgaacaggagcacactcccagatcccaag 12821998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 417
Target Start/End: Original strand, 13265109 - 13265163
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacct 417  Q
    ||||||| |||| ||| |||||||||||||| |||||| |||||||| |||||||    
T  13265109 aatcgaatctgaaaccataaggaggagcacattcccaggtcccaagccaatacct 13265163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 409
Target Start/End: Complemental strand, 24991605 - 24991553
Alignment:
Q  360 gaaaatcgaacctgagaccttaaggaggag---cacactcccagatcccaagc 409  Q
    ||||||||||||||||||||| ||||||||   |||||||||||||| |||||    
T  24991605 gaaaatcgaacctgagaccttgaggaggagcaacacactcccagatctcaagc 24991553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 409
Target Start/End: Complemental strand, 31826684 - 31826638
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||||||| ||||||||| ||||||||||||||| || |||||||||    
T  31826684 aatcgaacttgagaccttgaggaggagcacactcgcaaatcccaagc 31826638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 47044797 - 47044747
Alignment:
Q  358 gggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||| |||||||||||||||||  |||||||||| |||| |||||||||||    
T  47044797 gggagaatcgaacctgagacctcgaggaggagcaaactctcagatcccaag 47044747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 397
Target Start/End: Original strand, 5795399 - 5795444
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcc 397  Q
    |||||||||| |||| ||||||||||||| |||||||||| |||||    
T  5795399 gcactggggagaatcaaacctgagaccttgaggaggagcatactcc 5795444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 404
Target Start/End: Complemental strand, 7539665 - 7539624
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcc 404  Q
    |||||||||||||||||| || ||||||| ||||||||||||    
T  7539665 aatcgaacctgagaccttgagaaggagcatactcccagatcc 7539624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 416
Target Start/End: Complemental strand, 16581764 - 16581715
Alignment:
Q  367 gaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||| |||||||||| |||||||| | |||||| ||||||    
T  16581764 gaacctgagaccttgaggaggagcagactcccaggttccaagccaatacc 16581715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 19680789 - 19680842
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||| ||||||| |||| |||||||||||||  |||||||| ||||||    
T  19680789 aatcgaacctaagaccttgaggaagagcacactcccaagtcccaagcgaatacc 19680842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 24234720 - 24234667
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||| ||||||||| |||| |||||||||||||  |||||||| ||||||    
T  24234720 aatcgaacttgagaccttcaggatgagcacactcccaagtcccaagccaatacc 24234667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 33619281 - 33619228
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||| |||||| |||||||| ||| ||||||||||| |||| ||||||    
T  33619281 aatcgaacctaagacctcaaggaggaccacgctcccagatcctaagccaatacc 33619228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 404
Target Start/End: Original strand, 42815695 - 42815736
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcc 404  Q
    |||||||| |||||||||||||| || |||||||||||||||    
T  42815695 aatcgaacatgagaccttaaggaagaacacactcccagatcc 42815736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 408
Target Start/End: Original strand, 43623445 - 43623490
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    ||||||||||||||| | |||||||||||||||||| |||| ||||    
T  43623445 aatcgaacctgagacttcaaggaggagcacactccctgatctcaag 43623490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 55427201 - 55427254
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||||  || ||||||| |||||||| |||||||| ||||||    
T  55427201 aatcgaacctgagacctcgagcaggagcagactcccaggtcccaagccaatacc 55427254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 403
Target Start/End: Complemental strand, 43728466 - 43728430
Alignment:
Q  367 gaacctgagaccttaaggaggagcacactcccagatc 403  Q
    ||||||||||| || ||||||||||||||||||||||    
T  43728466 gaacctgagactttgaggaggagcacactcccagatc 43728430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 416
Target Start/End: Complemental strand, 46545789 - 46545733
Alignment:
Q  360 gaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||| |||||| ||| ||||||||||||||| ||| || ||||| ||||||    
T  46545789 gaaaatcgaatctgagatcttgaggaggagcacactctcaggtctcaagccaatacc 46545733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 397
Target Start/End: Complemental strand, 51622558 - 51622526
Alignment:
Q  365 tcgaacctgagaccttaaggaggagcacactcc 397  Q
    |||||||||||||||| ||||||||||||||||    
T  51622558 tcgaacctgagaccttgaggaggagcacactcc 51622526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 408
Target Start/End: Original strand, 52254394 - 52254450
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    ||||||| || |||| ||||||| |||| |||||||||||||||| || ||||||||    
T  52254394 gcactggagagaatctaacctgaaacctcaaggaggagcacactctcatatcccaag 52254450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 5e-17; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 52336775 - 52336828
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  52336775 aatcgaacctgagatcttaaggaggagcacactcccagatcccaagccaatacc 52336828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 363 - 415
Target Start/End: Original strand, 15786321 - 15786373
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatac 415  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  15786321 aatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatac 15786373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 8177183 - 8177236
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||| ||||||    
T  8177183 aatcgaacctgaaaccttgaggaggagcacactcccagatcccaagccaatacc 8177236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 33700774 - 33700827
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||| ||||||    
T  33700774 aatcgaacctgagaccttgaggaggagcacactcccagattccaagccaatacc 33700827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 357 - 416
Target Start/End: Original strand, 19528322 - 19528381
Alignment:
Q  357 ggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||| |||||||||||||||||| |||||||||||||||  ||||||||||| ||||||    
T  19528322 ggggagaatcgaacctgagaccttgaggaggagcacactcatagatcccaagccaatacc 19528381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 363 - 409
Target Start/End: Complemental strand, 2799937 - 2799891
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||    
T  2799937 aatcgaacctgagaccttgaggaggagcacactcccagatctcaagc 2799891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 363 - 409
Target Start/End: Complemental strand, 9117194 - 9117148
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||    
T  9117194 aatcgaacctgagacctcaaggaggagcacacttccagatcccaagc 9117148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 31383799 - 31383852
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||||||||||||||  |||||||||||||||||||| |||||||| ||||||    
T  31383799 aatcgaacctgagaccccaaggaggagcacactcccaggtcccaagccaatacc 31383852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 409
Target Start/End: Complemental strand, 6122869 - 6122823
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||||||||||||||||| ||||||||||||||||||  ||||||||    
T  6122869 aatcgaacctgagaccttgaggaggagcacactcccaagtcccaagc 6122823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 6650670 - 6650617
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||||||||||||| || |||||||||| |||||| |||||||||| ||||||    
T  6650670 aatcgaacctgagacattgaggaggagcatactccccgatcccaagccaatacc 6650617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 367 - 416
Target Start/End: Original strand, 9165200 - 9165249
Alignment:
Q  367 gaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||||||||| || ||||||||||||||||||| |||||||| ||||||    
T  9165200 gaacctgagactttgaggaggagcacactcccaggtcccaagccaatacc 9165249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 351 - 408
Target Start/End: Complemental strand, 9964525 - 9964468
Alignment:
Q  351 agcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||||||| || |||| |||||||||| || |||| ||||||||||||||||||||||    
T  9964525 agcactggagataatcaaacctgagacattgaggaagagcacactcccagatcccaag 9964468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 12587345 - 12587300
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||||||||||||||||  ||||||||||||||| |||||||||||    
T  12587345 aatcgaacctgagacctcgaggaggagcacactcacagatcccaag 12587300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 36371545 - 36371492
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||| ||||||| ||||||||||||||||||| | |||||| ||||||    
T  36371545 aatcgaacctcagaccttgaggaggagcacactcccaggttccaagccaatacc 36371492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 51703854 - 51703801
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||| || || ||||||||||||||||||||| |||||| ||||||    
T  51703854 aatcgaacctgaaactttgaggaggagcacactcccagattccaagccaatacc 51703801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 51814569 - 51814524
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||||||||||||||||| ||||||||||||||| |||||| ||||    
T  51814569 aatcgaacctgagaccttgaggaggagcacactctcagatctcaag 51814524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 399
Target Start/End: Complemental strand, 3265999 - 3265963
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactccca 399  Q
    |||||||||||||||||| ||||||||||||||||||    
T  3265999 aatcgaacctgagaccttgaggaggagcacactccca 3265963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 416
Target Start/End: Complemental strand, 16893472 - 16893416
Alignment:
Q  360 gaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||||||||||||||||||  |||||||| ||||||||| ||| ||||| ||||||    
T  16893472 gaaaatcgaacctgagacctcgaggaggagtacactcccaaatctcaagccaatacc 16893416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 404
Target Start/End: Original strand, 27223124 - 27223172
Alignment:
Q  356 tggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcc 404  Q
    |||||| |||||||||||||||||| | || ||||||||||||||||||    
T  27223124 tggggagaatcgaacctgagaccttgaagaagagcacactcccagatcc 27223172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 416
Target Start/End: Complemental strand, 30689098 - 30689034
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||| ||| |||| |||||||| ||||||||||| |||||||| ||| |||| ||||||    
T  30689098 gcactggggagaattgaacatgagacctcaaggaggagcaaactcccaggtcctaagccaatacc 30689034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 399
Target Start/End: Original strand, 38947473 - 38947509
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactccca 399  Q
    |||||||||||||||||| ||||||||||||||||||    
T  38947473 aatcgaacctgagaccttgaggaggagcacactccca 38947509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 407
Target Start/End: Complemental strand, 40810542 - 40810498
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaa 407  Q
    |||||||||||||||||| | ||||| ||||||||||||||||||    
T  40810542 aatcgaacctgagaccttgaagaggaacacactcccagatcccaa 40810498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 407
Target Start/End: Complemental strand, 41508898 - 41508862
Alignment:
Q  371 ctgagaccttaaggaggagcacactcccagatcccaa 407  Q
    |||||||||| ||||||||||||||||||||||||||    
T  41508898 ctgagaccttgaggaggagcacactcccagatcccaa 41508862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 416
Target Start/End: Original strand, 44046162 - 44046202
Alignment:
Q  376 accttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||| |||||||||||||||||||||||||||| ||||||    
T  44046162 accttgaggaggagcacactcccagatcccaagccaatacc 44046202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 416
Target Start/End: Original strand, 52116771 - 52116835
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||| |||| ||| ||||||||||| || ||||||||||||||||||  |||||||| ||||||    
T  52116771 gcactagggagaattgaacctgagacattgaggaggagcacactcccaagtcccaagccaatacc 52116835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 414
Target Start/End: Complemental strand, 4566623 - 4566572
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaata 414  Q
    |||||||||||||||| | ||||||||||||||||||| | |||||| ||||    
T  4566623 aatcgaacctgagaccctgaggaggagcacactcccaggttccaagccaata 4566572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 410
Target Start/End: Original strand, 26232350 - 26232409
Alignment:
Q  351 agcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagca 410  Q
    |||||||| || ||| ||||||||||||| |||||||||||||||| |||| | ||||||    
T  26232350 agcactggagagaattgaacctgagacctcaaggaggagcacactctcagacctcaagca 26232409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 409
Target Start/End: Original strand, 15581127 - 15581188
Alignment:
Q  347 aatcagcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    ||||||||| ||||| ||| |||||||||||||| | |||||||||||||| || ||||||||    
T  15581127 aatcagcaccggggagaattgaacctgagaccttta-gaggagcacactccaaggtcccaagc 15581188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 408
Target Start/End: Original strand, 16169974 - 16170024
Alignment:
Q  358 gggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||| |||||||||||| ||||| ||||||| ||||||||||| |||||||    
T  16169974 gggagaatcgaacctgaaaccttgaggaggaacacactcccaggtcccaag 16170024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 397
Target Start/End: Original strand, 19940873 - 19940907
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcc 397  Q
    |||| ||||||||||||||||||||||||||||||    
T  19940873 aatcaaacctgagaccttaaggaggagcacactcc 19940907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 521293 - 521248
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    ||||||||||||||| |||||||||||||||| |||| ||| ||||    
T  521293 aatcgaacctgagactttaaggaggagcacacccccaaatctcaag 521248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 400
Target Start/End: Complemental strand, 1247188 - 1247151
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccag 400  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  1247188 aatcgaacctgagaccttgaggaggagtacactcccag 1247151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 8904489 - 8904444
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||||||| ||||||||| ||||||||||||||| || ||||||||    
T  8904489 aatcgaacttgagaccttgaggaggagcacactcacatatcccaag 8904444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 9643818 - 9643863
Alignment:
Q  371 ctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||| |||| || |||||||||||||||||||| ||||||    
T  9643818 ctgagaccttgaggatgaacacactcccagatcccaagccaatacc 9643863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 421
Target Start/End: Original strand, 24047092 - 24047161
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaataccttgag 421  Q
    |||||||||| |||||||| ||| ||||  ||||||||||||||||||  || ||||| |||||| ||||    
T  24047092 gcactggggagaatcgaacttgaaacctcgaggaggagcacactcccaagtctcaagccaataccatgag 24047161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 24217045 - 24217001
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||||||||||||||||| || ||||||||||||| ||||||||||    
T  24217045 aatcgaacctgagaccttgag-aggagcacactccaagatcccaag 24217001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 31605838 - 31605895
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||| ||||| |||||||| ||||||||| |||||||||||||| | || ||||||||    
T  31605838 gcaccggggagaatcgaacttgagaccttgaggaggagcacacttcaaggtcccaagc 31605895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 37400349 - 37400296
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||| ||||||||||||||||||||||||  ||| || ||||| ||||||    
T  37400349 aatcgaacttgagaccttaaggaggagcacactttcaggtctcaagccaatacc 37400296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 397
Target Start/End: Complemental strand, 43446049 - 43446004
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcc 397  Q
    |||| ||||| |||||||| ||||||||| ||||||||||||||||    
T  43446049 gcaccggggagaatcgaacatgagaccttgaggaggagcacactcc 43446004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 397
Target Start/End: Complemental strand, 45266920 - 45266875
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcc 397  Q
    |||| ||||| |||||||||||||||||| |||||||||| |||||    
T  45266920 gcaccggggagaatcgaacctgagaccttgaggaggagcaaactcc 45266875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 416
Target Start/End: Original strand, 46146264 - 46146321
Alignment:
Q  359 ggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||||| ||||||||||| || | | |||||||| ||||||||||||||| ||||||    
T  46146264 ggaaaattgaacctgagactttgaaggggagcacattcccagatcccaagctaatacc 46146321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 409
Target Start/End: Complemental strand, 952592 - 952540
Alignment:
Q  357 ggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    ||||| |||| |||||||||| || |||| |||||||||||||| ||||||||    
T  952592 ggggagaatctaacctgagactttgaggatgagcacactcccaggtcccaagc 952540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 399
Target Start/End: Original strand, 1600293 - 1600329
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactccca 399  Q
    |||||||||||| || |||||||||||||||||||||    
T  1600293 aatcgaacctgaaactttaaggaggagcacactccca 1600329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 415
Target Start/End: Complemental strand, 9879513 - 9879461
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatac 415  Q
    ||||||| ||||||||| ||||| ||| |||||| |||||||||||| |||||    
T  9879513 aatcgaatctgagacctcaaggaagagtacactctcagatcccaagccaatac 9879461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 411
Target Start/End: Complemental strand, 12370238 - 12370190
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaa 411  Q
    |||| ||| ||||||||  ||||||||||||||||||| ||||||||||    
T  12370238 aatcaaacatgagacctcgaggaggagcacactcccaggtcccaagcaa 12370190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 409
Target Start/End: Complemental strand, 17297065 - 17297013
Alignment:
Q  357 ggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    ||||| |||| ||| ||||||||| |||||||||||||||| || ||||||||    
T  17297065 ggggagaatcaaacatgagaccttgaggaggagcacactccaaggtcccaagc 17297013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 396
Target Start/End: Complemental strand, 21392911 - 21392879
Alignment:
Q  364 atcgaacctgagaccttaaggaggagcacactc 396  Q
    ||||||||||||||||| |||||||||||||||    
T  21392911 atcgaacctgagaccttgaggaggagcacactc 21392879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 411
Target Start/End: Complemental strand, 39966180 - 39966120
Alignment:
Q  351 agcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaa 411  Q
    ||||| ||||| || ||||||||||||||| |||||||| ||||||| || |||| |||||    
T  39966180 agcaccggggagaaacgaacctgagaccttgaggaggagtacactccaaggtccctagcaa 39966120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 408
Target Start/End: Complemental strand, 47753784 - 47753744
Alignment:
Q  368 aacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    ||||||||||||| |||||||||||| ||| ||||||||||    
T  47753784 aacctgagaccttgaggaggagcacagtcctagatcccaag 47753744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 397
Target Start/End: Original strand, 52029932 - 52029972
Alignment:
Q  357 ggggaaaatcgaacctgagaccttaaggaggagcacactcc 397  Q
    ||||| |||||||||||||||||| || |||||||||||||    
T  52029932 ggggagaatcgaacctgagaccttgagaaggagcacactcc 52029972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 354 - 404
Target Start/End: Original strand, 2462 - 2512
Alignment:
Q  354 actggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcc 404  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  2462 actggggagaatcgaacctgagaccttgaggaggagcacactcccagatcc 2512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 11603 - 11550
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||||  |||||||||||||||||||||||||||| ||||||    
T  11603 aatcgaacctgagacctcgaggaggagcacactcccagatcccaagccaatacc 11550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 13047 - 13100
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||| ||||||    
T  13047 aatcgaacctgagaccttgaggaggagcacactcccagatctcaagccaatacc 13100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 84910 - 84853
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||| ||||| |||||||| ||||||||| ||||||||||||||||||||||||||||    
T  84910 gcaccggggagaatcgaacttgagaccttgaggaggagcacactcccagatcccaagc 84853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 360 - 416
Target Start/End: Original strand, 21549135 - 21549191
Alignment:
Q  360 gaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||||||||| |||||| |||||||||||||||||||||| |||||||| ||||||    
T  21549135 gaaaatcgaacttgagactttaaggaggagcacactcccaggtcccaagccaatacc 21549191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 416
Target Start/End: Original strand, 22020853 - 22020916
Alignment:
Q  353 cactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||| || ||||||| ||||||| | ||||||||||||||||||||||||||||| ||||||    
T  22020853 cactggagagaatcgaatctgagacttcaaggaggagcacactcccagatcccaagctaatacc 22020916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 30109309 - 30109362
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||||||||||||||| |||||||||||||||||||| || ||||| ||||||    
T  30109309 aatcgaacctgagacctcaaggaggagcacactcccaggtcacaagccaatacc 30109362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 37258367 - 37258420
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||| ||||| |||||||||||||||| ||||||||||| ||||||    
T  37258367 aatcgaacctgaaaccttgaggaggagcacactcctagatcccaagctaatacc 37258420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 43442271 - 43442218
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||||| |||||||||||||||||||||| ||| | ||||||    
T  43442271 aatcgaacctgagaccttgaggaggagcacactcccagatctcaaaccaatacc 43442218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 416
Target Start/End: Original strand, 30883189 - 30883252
Alignment:
Q  353 cactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||| || ||| |||| ||||||||| ||||||||||||||||||| |||||||| ||||||    
T  30883189 cactggtgagaattgaacttgagaccttgaggaggagcacactcccaggtcccaagccaatacc 30883252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 409
Target Start/End: Complemental strand, 14285236 - 14285190
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||||||||||||||||| ||||||||||||||||||| | ||||||    
T  14285236 aatcgaacctgagaccttgaggaggagcacactcccaggttccaagc 14285190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 408
Target Start/End: Original strand, 87424 - 87469
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||| ||||||||||||| ||||||||||||||||||||| |||||    
T  87424 aatcaaacctgagaccttgaggaggagcacactcccagattccaag 87469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 367 - 416
Target Start/End: Complemental strand, 12883911 - 12883862
Alignment:
Q  367 gaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||| |||||||| ||||||||||||||||||||||||||| | ||||||    
T  12883911 gaacatgagacctcaaggaggagcacactcccagatcccaacctaatacc 12883862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 16773882 - 16773837
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||||||||||||||||  ||||||||||||||||||| |||||||    
T  16773882 aatcgaacctgagacctcgaggaggagcacactcccaggtcccaag 16773837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 25627132 - 25627079
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||||| ||||||||||||||||||  | |||||| ||||||    
T  25627132 aatcgaacctgagaccttgaggaggagcacactcccaagttccaagccaatacc 25627079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 29075856 - 29075803
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||| ||||| ||  |||||||||||||||||||||||||||| ||||||    
T  29075856 aatcgaacatgagatctcgaggaggagcacactcccagatcccaagccaatacc 29075803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 34984881 - 34984828
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||| ||||||| ||||||||||||||||||| | |||||| ||||||    
T  34984881 aatcgaacctaagaccttgaggaggagcacactcccaggttccaagccaatacc 34984828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 416
Target Start/End: Complemental strand, 16436695 - 16436640
Alignment:
Q  360 gaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||||||||| ||||||||| |||||||||||||||| || |||||||| ||||||    
T  16436695 gaaaatcgaacatgagaccttgaggaggagcacactccaag-tcccaagccaatacc 16436640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 416
Target Start/End: Complemental strand, 16457896 - 16457832
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||| ||||| ||| |||| ||||||||| |||||||||||||||| || |||||||| ||||||    
T  16457896 gcaccggggagaattgaacatgagaccttgaggaggagcacactccaaggtcccaagccaatacc 16457832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 416
Target Start/End: Original strand, 18595999 - 18596055
Alignment:
Q  360 gaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||||||||||| ||||||| |||||||||||| |||||| || ||||| ||||||    
T  18595999 gaaaatcgaacctaagaccttgaggaggagcacattcccaggtcacaagccaatacc 18596055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 416
Target Start/End: Original strand, 29692392 - 29692440
Alignment:
Q  368 aacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||| || |||||||||||||||||||||||||| | ||||||    
T  29692392 aacctgagactttgaggaggagcacactcccagatcccaatccaatacc 29692440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 414
Target Start/End: Complemental strand, 25979245 - 25979194
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaata 414  Q
    |||||||||||||||||| |||||||| ||||||||| || |||||| ||||    
T  25979245 aatcgaacctgagaccttgaggaggagaacactcccaaattccaagccaata 25979194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 397
Target Start/End: Original strand, 3584686 - 3584720
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcc 397  Q
    |||| ||||||||||||||||||||||||||||||    
T  3584686 aatcaaacctgagaccttaaggaggagcacactcc 3584720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 407
Target Start/End: Complemental strand, 24895120 - 24895066
Alignment:
Q  353 cactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaa 407  Q
    |||| ||||||||||||||||||| ||| |||||||||| ||||| || ||||||    
T  24895120 cactagggaaaatcgaacctgagagcttgaggaggagcatactccaaggtcccaa 24895066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 14495814 - 14495851
Alignment:
Q  371 ctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||||||||  |||||||||||||||||||||||||||    
T  14495814 ctgagacctcgaggaggagcacactcccagatcccaag 14495851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 399
Target Start/End: Original strand, 17028265 - 17028301
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactccca 399  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  17028265 aatcaaacctgagaccttgaggaggagcacactccca 17028301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 381 - 409
Target Start/End: Original strand, 17761374 - 17761402
Alignment:
Q  381 aaggaggagcacactcccagatcccaagc 409  Q
    |||||||||||||||||||||||||||||    
T  17761374 aaggaggagcacactcccagatcccaagc 17761402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 42327396 - 42327449
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||| ||||||    
T  42327396 aatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaatacc 42327449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 352 - 416
Target Start/End: Complemental strand, 21213855 - 21213791
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||| ||||| ||||||||||||||||| |||||||| ||||||||||| |||||||| ||||||    
T  21213855 gcaccggggagaatcgaacctgagacctcaaggaggaacacactcccaggtcccaagccaatacc 21213791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 357 - 416
Target Start/End: Complemental strand, 37480156 - 37480097
Alignment:
Q  357 ggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||| |||||||| ||||||    
T  37480156 ggggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaatacc 37480097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 358 - 416
Target Start/End: Complemental strand, 29503351 - 29503293
Alignment:
Q  358 gggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||| |||||||||||||||||| ||||||||||||||||||| |||||| | ||||||    
T  29503351 gggagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaaaccaatacc 29503293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 408
Target Start/End: Original strand, 12994377 - 12994422
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||    
T  12994377 aatcgaacttgagaccttaaggaggagcacactcccaggtcccaag 12994422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 355 - 408
Target Start/End: Complemental strand, 39715075 - 39715022
Alignment:
Q  355 ctggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    ||||||| |||||||||||||||||  ||||||||||||||||||| |||||||    
T  39715075 ctggggagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaag 39715022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 416
Target Start/End: Original strand, 23052513 - 23052577
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||| |||| |||||||||||||||||| ||||| ||||||||||||  |||||||| ||||||    
T  23052513 gcactagggagaatcgaacctgagaccttgaggagaagcacactcccaagtcccaagccaatacc 23052577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 363 - 414
Target Start/End: Original strand, 4262303 - 4262354
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaata 414  Q
    |||||||||||||||||| |||||||||||||| |||| |||||||| ||||    
T  4262303 aatcgaacctgagaccttgaggaggagcacactgccaggtcccaagccaata 4262354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 12086130 - 12086183
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||||||| |||||||| |||||||||||||| |||| |||||||| ||||||    
T  12086130 aatcgaacccgagaccttgaggaggagcacacttccaggtcccaagccaatacc 12086183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 16918579 - 16918632
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||| ||||| ||||||| |||||||||||||||||||||||||| | ||||||    
T  16918579 aatccaacctaagaccttgaggaggagcacactcccagatcccaaaccaatacc 16918632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 400
Target Start/End: Original strand, 40416391 - 40416428
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccag 400  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  40416391 aatcgaacctgagaccttaaggaggagcatactcccag 40416428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 399
Target Start/End: Original strand, 21195677 - 21195713
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactccca 399  Q
    |||||||||||||||||| ||||||||||||||||||    
T  21195677 aatcgaacctgagaccttgaggaggagcacactccca 21195713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 416
Target Start/End: Original strand, 30410547 - 30410603
Alignment:
Q  360 gaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||||||||| |||| |||| |||||||||||||||| || |||||||| ||||||    
T  30410547 gaaaatcgaacatgagtccttgaggaggagcacactcctaggtcccaagccaatacc 30410603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 407
Target Start/End: Complemental strand, 33582048 - 33582004
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaa 407  Q
    ||||||||||||||||| |||||||||||||||| ||| ||||||    
T  33582048 aatcgaacctgagacctcaaggaggagcacactctcaggtcccaa 33582004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 399
Target Start/End: Original strand, 17737614 - 17737661
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactccca 399  Q
    ||||| |||| |||||||| ||||||||| ||||||||||||||||||    
T  17737614 gcactagggataatcgaacatgagaccttgaggaggagcacactccca 17737661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 409
Target Start/End: Original strand, 8192481 - 8192526
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||||||||||||||||| || ||||||||||||| |||||||||||    
T  8192481 aatcgaacctgagaccttgag-aggagcacactccaagatcccaagc 8192526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 397
Target Start/End: Complemental strand, 13803570 - 13803536
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcc 397  Q
    |||||||||||||||||| ||||||||||||||||    
T  13803570 aatcgaacctgagaccttgaggaggagcacactcc 13803536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 409
Target Start/End: Complemental strand, 14500352 - 14500306
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    ||||||| |||||||||  |||||||||||||||||||||| |||||    
T  14500352 aatcgaatctgagacctagaggaggagcacactcccagatctcaagc 14500306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 409
Target Start/End: Original strand, 28194263 - 28194308
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||||||||| |||||||||| ||||||||||||| |||||||||||    
T  28194263 aatcgaacctaagaccttaag-aggagcacactccaagatcccaagc 28194308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 42922490 - 42922436
Alignment:
Q  363 aatcgaacctgagacctta-aggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||||||||||||||||  ||||||||||||||||||| | |||||| ||||||    
T  42922490 aatcgaacctgagacctttgaggaggagcacactcccaggttccaagccaatacc 42922436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 3001454 - 3001409
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||||||||||||| || ||||||||||||||||| ||||| ||||    
T  3001454 aatcgaacctgagatctcaaggaggagcacactcctagatctcaag 3001409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 408
Target Start/End: Original strand, 4438980 - 4439025
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||||||| || |||||| ||||||||||||||| |||||||||||    
T  4438980 aatcgaacatgcgaccttgaggaggagcacactctcagatcccaag 4439025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 11251162 - 11251109
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||| ||||||||||||| |||||||||||||| |||  |||||||| ||||||    
T  11251162 aatcaaacctgagaccttgaggaggagcacacttccaagtcccaagccaatacc 11251109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 19244184 - 19244139
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    ||||||||||||||||||  |||||||||||||| ||| |||||||    
T  19244184 aatcgaacctgagaccttggggaggagcacactctcaggtcccaag 19244139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 407
Target Start/End: Complemental strand, 25637223 - 25637182
Alignment:
Q  366 cgaacctgagaccttaaggaggagcacactcccagatcccaa 407  Q
    ||||||||||||||  || |||||||||||||||||||||||    
T  25637223 cgaacctgagacctcgagaaggagcacactcccagatcccaa 25637182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 26482178 - 26482122
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||||| ||| |||||||||||||||||| | |||||||||||||| || ||||||||    
T  26482178 gcactgaggagaatcgaacctgagaccttga-gaggagcacactcctaggtcccaagc 26482122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 28846766 - 28846721
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    ||||||||||||||| |  ||||||||||||||||||| |||||||    
T  28846766 aatcgaacctgagacatcgaggaggagcacactcccaggtcccaag 28846721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 30359739 - 30359683
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||||||||| |||||||  ||||||||| |||||||||||||||| || ||||||||    
T  30359739 gcactggggagaatcgaaa-tgagaccttgaggaggagcacactccaaggtcccaagc 30359683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 404
Target Start/End: Original strand, 34041589 - 34041630
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcc 404  Q
    |||| ||||||||||||| ||||||||||||||| |||||||    
T  34041589 aatcaaacctgagaccttgaggaggagcacactctcagatcc 34041630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 397
Target Start/End: Original strand, 41908628 - 41908673
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcc 397  Q
    |||| ||||| |||||||| ||||||||| ||||||||||||||||    
T  41908628 gcaccggggataatcgaacttgagaccttgaggaggagcacactcc 41908673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 42602629 - 42602576
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||| ||||| ||||||| || |||||||||||||||| |||||||| ||||||    
T  42602629 aatcaaacctaagaccttgagaaggagcacactcccaggtcccaagccaatacc 42602576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 409
Target Start/End: Original strand, 6099514 - 6099565
Alignment:
Q  357 ggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    ||||| |||||||||||||||||| | |||||||||||||| || ||||||||    
T  6099514 ggggagaatcgaacctgagaccttga-gaggagcacactccaaggtcccaagc 6099565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 416
Target Start/End: Original strand, 7799025 - 7799089
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||||| || ||||||| |||||| ||  ||||||||||||||||||  |||||||| ||||||    
T  7799025 gcactggagagaatcgaatctgagatctcgaggaggagcacactcccaagtcccaagccaatacc 7799089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 403
Target Start/End: Original strand, 31573642 - 31573682
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatc 403  Q
    ||||||||||||||| | |||||||||||||||| ||||||    
T  31573642 aatcgaacctgagacatcaaggaggagcacactctcagatc 31573682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 399
Target Start/End: Original strand, 33839265 - 33839297
Alignment:
Q  367 gaacctgagaccttaaggaggagcacactccca 399  Q
    |||||||||||||| ||||||||||||||||||    
T  33839265 gaacctgagaccttgaggaggagcacactccca 33839297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 416
Target Start/End: Original strand, 19703478 - 19703541
Alignment:
Q  353 cactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||| |||| |||||||||||||||||| ||||||||||||||| ||| |||||||| ||||||    
T  19703478 cactagggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaatacc 19703541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 968437 - 968384
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||||  ||||||||||||||||||| |||||||| ||||||    
T  968437 aatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaatacc 968384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 3624655 - 3624602
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||||| | ||||||||||||||||| |||||||| ||||||    
T  3624655 aatcgaacctgagaccttgaagaggagcacactcccaggtcccaagccaatacc 3624602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 16852415 - 16852362
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||||  ||||||||||||||||||| |||||||| ||||||    
T  16852415 aatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaatacc 16852362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 35690065 - 35690118
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||||| |||||||||| || |||||||||||||| ||||||    
T  35690065 aatcgaacctgagaccttgaggaggagcaaacacccagatcccaagccaatacc 35690118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 416
Target Start/End: Complemental strand, 2203578 - 2203514
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||| ||||| ||| || ||||||||||| ||||||||||||||||||| |||||||| ||||||    
T  2203578 gcaccggggagaattgaccctgagaccttgaggaggagcacactcccaggtcccaagccaatacc 2203514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 363 - 414
Target Start/End: Original strand, 6569772 - 6569823
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaata 414  Q
    |||||||| ||| |||| ||||||||||||||||||||||||||||| ||||    
T  6569772 aatcgaacatgaaacctaaaggaggagcacactcccagatcccaagccaata 6569823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 409
Target Start/End: Complemental strand, 11819851 - 11819805
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||||||||||||||||| ||||||||||||||||||  ||||||||    
T  11819851 aatcgaacctgagaccttgaggaggagcacactcccaagtcccaagc 11819805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 409
Target Start/End: Complemental strand, 27750805 - 27750759
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||||||||||||||||| ||||||||||||||||||  ||||||||    
T  27750805 aatcgaacctgagaccttgaggaggagcacactcccaagtcccaagc 27750759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 403
Target Start/End: Complemental strand, 36205276 - 36205230
Alignment:
Q  357 ggggaaaatcgaacctgagaccttaaggaggagcacactcccagatc 403  Q
    ||||| |||||||| ||||||||| ||||||||||||||||||||||    
T  36205276 ggggagaatcgaacatgagaccttgaggaggagcacactcccagatc 36205230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 367 - 416
Target Start/End: Complemental strand, 6536591 - 6536542
Alignment:
Q  367 gaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||| |||||||||||||||| || |||||||| ||||||    
T  6536591 gaacctgagaccttgaggaggagcacactcctaggtcccaagccaatacc 6536542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 18540373 - 18540320
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||||| ||||| || |||||||||| |||||||| ||||||    
T  18540373 aatcgaacctgagaccttgaggagaagtacactcccaggtcccaagccaatacc 18540320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 367 - 408
Target Start/End: Original strand, 23361654 - 23361695
Alignment:
Q  367 gaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  23361654 gaacctgagaccttgaggaggagcacactcccatatcccaag 23361695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 28783135 - 28783082
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||| ||||||||| ||||||||||||||||||| || ||||| ||||||    
T  28783135 aatcgaacatgagaccttgaggaggagcacactcccaggtctcaagccaatacc 28783082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 29431086 - 29431033
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||||||||||| ||| |||||||||||||||||||  |||||||| ||||||    
T  29431086 aatcgaacctgaggcctcaaggaggagcacactcccaagtcccaagccaatacc 29431033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 29858050 - 29858103
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||||  ||||||||||||||||| | |||||||| ||||||    
T  29858050 aatcgaacctgagacctcgaggaggagcacactccctggtcccaagccaatacc 29858103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 408
Target Start/End: Complemental strand, 28750651 - 28750600
Alignment:
Q  357 ggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    ||||| |||||||||  ||||||||||||||||| ||||||||||| |||||    
T  28750651 ggggagaatcgaaccgaagaccttaaggaggagcgcactcccagattccaag 28750600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 395
Target Start/End: Original strand, 28787486 - 28787529
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacact 395  Q
    |||||||||| |||| ||||||||||||| ||||||||||||||    
T  28787486 gcactggggagaatcaaacctgagaccttgaggaggagcacact 28787529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 414
Target Start/End: Complemental strand, 33017289 - 33017238
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaata 414  Q
    |||||||||||||||||| |||||||||||||| |||| | |||||| ||||    
T  33017289 aatcgaacctgagaccttgaggaggagcacacttccaggttccaagccaata 33017238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 414
Target Start/End: Complemental strand, 34628717 - 34628666
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaata 414  Q
    ||||||||||||||| || ||||| | |||||||||||||||||||| ||||    
T  34628717 aatcgaacctgagactttgaggagaaacacactcccagatcccaagccaata 34628666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 409
Target Start/End: Complemental strand, 26688936 - 26688894
Alignment:
Q  367 gaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||||||||||||| |||||||||||||||| || ||||||||    
T  26688936 gaacctgagaccttgaggaggagcacactccaaggtcccaagc 26688894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 409
Target Start/End: Original strand, 44780115 - 44780161
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||| ||||||||||||| ||||||||||||||||||  ||||||||    
T  44780115 aatcaaacctgagaccttgaggaggagcacactcccaagtcccaagc 44780161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 416
Target Start/End: Complemental strand, 4830558 - 4830509
Alignment:
Q  367 gaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||  ||||||| ||||||| |||||||||| ||||||||    
T  4830558 gaacctgagacctcgaggaggaacacactctcagatcccaaacaaatacc 4830509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 7140784 - 7140731
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||||| |||||| ||  ||||||||||||| |||||||||||||| ||||||    
T  7140784 aatcgaatctgagagctcgaggaggagcacacacccagatcccaagccaatacc 7140731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 8485074 - 8485021
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||  |||||||| || ||||||||||||| ||| |||||||||||||||    
T  8485074 aatcgaaaatgagacctcaaagaggagcacactcacaggtcccaagcaaatacc 8485021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 8794346 - 8794399
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||| | |||||||||||||| |||| | |||||| ||||||    
T  8794346 aatcgaacctgagaccctgaggaggagcacacttccaggttccaagccaatacc 8794399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 11492074 - 11492127
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||| ||||||  || ||||||||||||||||||| ||||| ||||||    
T  11492074 aatcgaacctaagacctcgagaaggagcacactcccagatctcaagccaatacc 11492127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 400
Target Start/End: Original strand, 22193365 - 22193402
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccag 400  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  22193365 aatcgaacctaagaccttgaggaggagcacactcccag 22193402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 405
Target Start/End: Original strand, 24675510 - 24675555
Alignment:
Q  360 gaaaatcgaacctgagaccttaaggaggagcacactcccagatccc 405  Q
    |||||||||| |||||||||| || |||||||||||| ||||||||    
T  24675510 gaaaatcgaatctgagaccttgagaaggagcacactctcagatccc 24675555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 416
Target Start/End: Original strand, 30483889 - 30483938
Alignment:
Q  367 gaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||  | |||||||||||||||||| ||||||||| ||||||    
T  30483889 gaacctgagactctgaggaggagcacactcccatatcccaagccaatacc 30483938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 407
Target Start/End: Original strand, 3305189 - 3305233
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaa 407  Q
    |||||||  ||||||||| ||||||||||| ||||||||||||||    
T  3305189 aatcgaatttgagaccttgaggaggagcacgctcccagatcccaa 3305233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 409
Target Start/End: Original strand, 3524396 - 3524448
Alignment:
Q  357 ggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    ||||| ||| |||||| ||||||| |||||||||||||||| || ||||||||    
T  3524396 ggggagaattgaacctaagaccttgaggaggagcacactccaaggtcccaagc 3524448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 416
Target Start/End: Complemental strand, 12988502 - 12988450
Alignment:
Q  364 atcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||||||||| ||||| |||||||||||||| |||| | |||||| ||||||    
T  12988502 atcgaacctgaaaccttgaggaggagcacacttccaggttccaagccaatacc 12988450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 416
Target Start/End: Original strand, 30774734 - 30774790
Alignment:
Q  360 gaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||| |||||||||  ||||||| |||||| ||||||||||| | ||||||    
T  30774734 gaaaatcgaatctgagacctcgaggaggaacacacttccagatcccaaaccaatacc 30774790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 33727874 - 33727906
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacact 395  Q
    |||||||||||||||||| ||||||||||||||    
T  33727874 aatcgaacctgagaccttgaggaggagcacact 33727906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 416
Target Start/End: Original strand, 10338165 - 10338228
Alignment:
Q  353 cactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||||||  |||||||||||||||||| |||||||||||||||| || |||||||| ||||||    
T  10338165 cactggggggaatcgaacctgagaccttgaggaggagcacactcctaggtcccaagccaatacc 10338228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 6385937 - 6385892
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||    
T  6385937 aatcgaacctgagaccttaaggaggagcacagtcccaggtcccaag 6385892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 33549179 - 33549126
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||||  ||||||||||||||||||| |||||||| ||||||    
T  33549179 aatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaatacc 33549126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 365 - 408
Target Start/End: Original strand, 23910114 - 23910157
Alignment:
Q  365 tcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||||||||||||||| ||||||||||||||||||| |||||||    
T  23910114 tcgaacctgagaccttgaggaggagcacactcccaggtcccaag 23910157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 409
Target Start/End: Complemental strand, 20213116 - 20213070
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    ||||||||||||||| || ||||||||||||||||||| ||||||||    
T  20213116 aatcgaacctgagacattgaggaggagcacactcccaggtcccaagc 20213070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 409
Target Start/End: Complemental strand, 22107139 - 22107093
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    ||||||||||||||| || ||||||||||||||||||| ||||||||    
T  22107139 aatcgaacctgagacattgaggaggagcacactcccaggtcccaagc 22107093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 360 - 397
Target Start/End: Complemental strand, 4105129 - 4105092
Alignment:
Q  360 gaaaatcgaacctgagaccttaaggaggagcacactcc 397  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  4105129 gaaaatcgaacctgagatcttaaggaggagcacactcc 4105092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 12188304 - 12188357
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||| ||| ||||| ||||||||||||||||||| |||||||| ||||||    
T  12188304 aatcgaacttgaaaccttgaggaggagcacactcccaggtcccaagccaatacc 12188357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 28364012 - 28363959
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||||| |||||||||| ||||||||||||||| |||||||||| | ||||||    
T  28364012 aatcgaatctgagaccttgaggaggagcacactcgcagatcccaaaccaatacc 28363959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 30127475 - 30127422
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||||  | |||||||||||||||||| ||||||| ||||||    
T  30127475 aatcgaacctgagacctcgaagaggagcacactcccagaccccaagccaatacc 30127422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 415
Target Start/End: Original strand, 14278112 - 14278164
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatac 415  Q
    |||| ||||||||||||||||||||||| ||||||||| ||| |||| |||||    
T  14278112 aatcaaacctgagaccttaaggaggagcgcactcccaggtccaaagccaatac 14278164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 416
Target Start/End: Original strand, 31622997 - 31623045
Alignment:
Q  368 aacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||||||||||  ||||||||||||||||||| |||||||| ||||||    
T  31622997 aacctgagacctcgaggaggagcacactcccaggtcccaagccaatacc 31623045  T

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Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 408
Target Start/End: Complemental strand, 11423651 - 11423596
Alignment:
Q  353 cactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||||| ||||||||||||||||||||  ||||| |||| ||||||| ||||||||    
T  11423651 cactggagaaaatcgaacctgagacctcgaggagaagcatactcccaaatcccaag 11423596  T

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Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 416
Target Start/End: Complemental strand, 14446275 - 14446217
Alignment:
Q  358 gggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||| |||||||||||||| || ||||| ||||||||| ||||||||||| | ||||||    
T  14446275 gggagaatcgaacctgagatctaaaggaagagcacacttccagatcccaaacgaatacc 14446217  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 8639182 - 8639129
Alignment:
Q  362 aaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatac 415  Q
    |||||||| |||||||||| |||||||||||| | ||||||| ||||| |||||    
T  8639182 aaatcgaagctgagaccttgaggaggagcacatttccagatctcaagccaatac 8639129  T

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Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 408
Target Start/End: Original strand, 24641191 - 24641236
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||||||||| | ||||  |||||||||||||||||||||||||||    
T  24641191 aatcgaaccttaaacctcgaggaggagcacactcccagatcccaag 24641236  T

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Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 415
Target Start/End: Original strand, 11103436 - 11103488
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatac 415  Q
    ||||||| | ||||||||||||||||||||||| |||  |||||||| |||||    
T  11103436 aatcgaatcggagaccttaaggaggagcacactaccaagtcccaagcgaatac 11103488  T

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Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 399
Target Start/End: Original strand, 14199948 - 14199984
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactccca 399  Q
    ||||||| |||||||||| ||||||||||||||||||    
T  14199948 aatcgaatctgagaccttgaggaggagcacactccca 14199984  T

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Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 407
Target Start/End: Original strand, 17149586 - 17149629
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaa 407  Q
    |||||||||||||||||| || ||||||||||||| |||||||||    
T  17149586 aatcgaacctgagaccttgag-aggagcacactccaagatcccaa 17149629  T

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Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 416
Target Start/End: Complemental strand, 21418556 - 21418492
Alignment:
Q  352 gcactggggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||| |||| |||||||| |||||| |  ||||||||||||||||||  |||||||| ||||||    
T  21418556 gcactagggagaatcgaacttgagacatggaggaggagcacactcccaagtcccaagccaatacc 21418492  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 415
Target Start/End: Original strand, 34786455 - 34786507
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatac 415  Q
    |||||||| |||||| |  || ||||||||||||||||||||||||| |||||    
T  34786455 aatcgaacttgagacttcgagaaggagcacactcccagatcccaagccaatac 34786507  T

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Target: scaffold0258 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 15324 - 15377
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||||  ||||||||||||||||||| |||||||| ||||||    
T  15324 aatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaatacc 15377  T

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Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 19848 - 19901
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||| |||||||| ||||||||||| ||||||||||||||||| ||||||    
T  19848 aatcgaacttgagacctcaaggaggagcagactcccagatcccaagccaatacc 19901  T

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Target: scaffold1367 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 841 - 894
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    ||||||||||||||| |  |||||||||||| ||||||||||||||| ||||||    
T  841 aatcgaacctgagacttcgaggaggagcacattcccagatcccaagccaatacc 894  T

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Target: scaffold0180 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 19963 - 20016
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||||| |||||||||| |||||||| | |||||| ||||||    
T  19963 aatcgaacctgagaccttgaggaggagcatactcccaggttccaagccaatacc 20016  T

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Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 367 - 416
Target Start/End: Original strand, 94976 - 95025
Alignment:
Q  367 gaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||| ||||||||||||||||||| | |||||| ||||||    
T  94976 gaacctgagaccttgaggaggagcacactcccaggttccaagccaatacc 95025  T

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Target: scaffold0300 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 409
Target Start/End: Complemental strand, 4415 - 4369
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagc 409  Q
    |||||||||| | |||||||| ||||||||||||||| |||||||||    
T  4415 aatcgaacctaaaaccttaagaaggagcacactcccaaatcccaagc 4369  T

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Target: scaffold0517 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 7727 - 7780
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||| ||||||||||||||||||||||||  ||| || ||||| ||||||    
T  7727 aatcgaacttgagaccttaaggaggagcacactttcaggtctcaagccaatacc 7780  T

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Target: scaffold0126 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 25348 - 25401
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||||| || |||||||||||||||  || ||||| ||||||    
T  25348 aatcgaacctgagaccttgagaaggagcacactcccaagtctcaagccaatacc 25401  T

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Target: scaffold0101 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 43333 - 43386
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||| |||||||||||| |||| ||||||||||  |||||||| ||||||    
T  43333 aatcgaacatgagaccttaagaaggaacacactcccaagtcccaagccaatacc 43386  T

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Target: scaffold0044 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 93022 - 92977
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaag 408  Q
    |||||||||| |||||| |||||||| ||||||||||||| |||||    
T  93022 aatcgaacctcagacctcaaggaggatcacactcccagattccaag 92977  T

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Target: scaffold0021 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 416
Target Start/End: Original strand, 156987 - 157041
Alignment:
Q  360 gaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||||  |||  |||||||||||||||||||||| ||||| ||||||    
T  156987 gaaaatcgaacctga--cctcgaggaggagcacactcccagatctcaagccaatacc 157041  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 407
Target Start/End: Original strand, 81560 - 81609
Alignment:
Q  358 gggaaaatcgaacctgagaccttaaggaggagcacactcccagatcccaa 407  Q
    |||| ||||||| |||||||||| |||||||||||||| |||||| ||||    
T  81560 gggagaatcgaatctgagaccttgaggaggagcacacttccagattccaa 81609  T

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Target: scaffold0122 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 416
Target Start/End: Original strand, 6921 - 6973
Alignment:
Q  364 atcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatacc 416  Q
    |||||||||||||| || |||||||||||||||||   |||||||| ||||||    
T  6921 atcgaacctgagactttgaggaggagcacactccccagtcccaagccaatacc 6973  T

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Target: scaffold0032 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 415
Target Start/End: Complemental strand, 112357 - 112305
Alignment:
Q  363 aatcgaacctgagaccttaaggaggagcacactcccagatcccaagcaaatac 415  Q
    |||||||||| |||||| || ||||| ||||||||||||| |||||| |||||    
T  112357 aatcgaacctcagacctcaaagaggaccacactcccagattccaagccaatac 112305  T

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