View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5972-Insertion-6 (Length: 637)

Name: NF5972-Insertion-6
Description: NF5972
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5972-Insertion-6
NF5972-Insertion-6
[»] chr6 (18 HSPs)
chr6 (9-620)||(6673624-6674235)
chr6 (506-623)||(4485566-4485684)
chr6 (524-620)||(11936771-11936868)
chr6 (524-620)||(16734804-16734901)
chr6 (522-581)||(15690435-15690494)
chr6 (522-582)||(12591830-12591890)
chr6 (507-582)||(9631198-9631273)
chr6 (506-568)||(1942550-1942612)
chr6 (524-620)||(15361714-15361811)
chr6 (522-582)||(6684091-6684151)
chr6 (537-620)||(11948751-11948835)
chr6 (522-578)||(14669393-14669449)
chr6 (506-629)||(23264491-23264617)
chr6 (506-582)||(29667958-29668036)
chr6 (508-582)||(23904395-23904469)
chr6 (522-570)||(17719778-17719826)
chr6 (513-567)||(4591138-4591192)
chr6 (520-570)||(34374820-34374870)
[»] chr3 (14 HSPs)
chr3 (519-629)||(1613208-1613319)
chr3 (506-582)||(5498459-5498535)
chr3 (506-631)||(16457324-16457450)
chr3 (506-582)||(27259488-27259564)
chr3 (522-620)||(13845989-13846088)
chr3 (524-620)||(7407758-7407855)
chr3 (522-582)||(1627990-1628050)
chr3 (524-580)||(1654575-1654631)
chr3 (506-581)||(9633486-9633561)
chr3 (527-620)||(2550168-2550262)
chr3 (526-582)||(26707860-26707916)
chr3 (507-623)||(27713440-27713554)
chr3 (542-582)||(2943257-2943297)
chr3 (549-582)||(35083000-35083033)
[»] chr2 (9 HSPs)
chr2 (506-621)||(41573374-41573490)
chr2 (524-620)||(31342720-31342817)
chr2 (522-582)||(30267000-30267060)
chr2 (509-631)||(11017441-11017564)
chr2 (522-582)||(7718182-7718242)
chr2 (522-582)||(44920955-44921014)
chr2 (510-582)||(24479137-24479209)
chr2 (522-620)||(15513664-15513763)
chr2 (525-601)||(40016591-40016667)
[»] chr8 (19 HSPs)
chr8 (506-631)||(6403574-6403700)
chr8 (506-620)||(29553610-29553725)
chr8 (524-620)||(25638806-25638903)
chr8 (524-620)||(28249079-28249176)
chr8 (506-620)||(6801834-6801949)
chr8 (522-620)||(17634475-17634574)
chr8 (509-619)||(31347333-31347444)
chr8 (522-580)||(5528740-5528798)
chr8 (527-620)||(45356116-45356210)
chr8 (522-578)||(19369957-19370013)
chr8 (522-578)||(19448445-19448501)
chr8 (522-578)||(19532575-19532631)
chr8 (522-620)||(25637641-25637740)
chr8 (509-616)||(5650953-5651061)
chr8 (526-582)||(29345432-29345488)
chr8 (506-581)||(31369150-31369225)
chr8 (522-578)||(18766914-18766970)
chr8 (506-569)||(19341476-19341540)
chr8 (507-582)||(5000661-5000736)
[»] chr7 (15 HSPs)
chr7 (506-582)||(3234308-3234384)
chr7 (506-572)||(14803113-14803179)
chr7 (506-572)||(15250107-15250173)
chr7 (524-620)||(4685407-4685504)
chr7 (522-582)||(26205458-26205518)
chr7 (522-582)||(26225021-26225081)
chr7 (506-620)||(26608543-26608658)
chr7 (506-620)||(30089716-30089831)
chr7 (522-578)||(9242531-9242587)
chr7 (522-582)||(10022121-10022181)
chr7 (509-582)||(20277403-20277476)
chr7 (506-579)||(26619149-26619221)
chr7 (525-580)||(26621136-26621191)
chr7 (522-582)||(16170268-16170328)
chr7 (506-566)||(29932407-29932467)
[»] chr4 (12 HSPs)
chr4 (510-582)||(24559038-24559110)
chr4 (522-582)||(47066077-47066137)
chr4 (506-620)||(4881073-4881188)
chr4 (527-620)||(43600269-43600363)
chr4 (522-578)||(1684999-1685055)
chr4 (522-582)||(53300348-53300408)
chr4 (522-578)||(1152041-1152097)
chr4 (506-568)||(4923690-4923752)
chr4 (507-582)||(26075293-26075368)
chr4 (512-582)||(4904183-4904253)
chr4 (542-582)||(21539314-21539354)
chr4 (534-582)||(48464049-48464097)
[»] chr1 (15 HSPs)
chr1 (506-620)||(12189933-12190048)
chr1 (522-620)||(16222775-16222874)
chr1 (506-601)||(28636884-28636979)
chr1 (506-582)||(897436-897512)
chr1 (506-582)||(5911707-5911783)
chr1 (522-580)||(51758750-51758808)
chr1 (522-582)||(15214324-15214384)
chr1 (522-582)||(37097383-37097443)
chr1 (534-620)||(13208621-13208708)
chr1 (509-581)||(39368684-39368756)
chr1 (522-579)||(15193916-15193973)
chr1 (510-567)||(18308133-18308190)
chr1 (545-624)||(3399642-3399722)
chr1 (544-582)||(15204613-15204651)
chr1 (501-562)||(17112901-17112962)
[»] scaffold0007 (1 HSPs)
scaffold0007 (506-631)||(8726-8850)
[»] chr5 (21 HSPs)
chr5 (506-582)||(18191892-18191968)
chr5 (506-620)||(9354393-9354508)
chr5 (506-601)||(30786248-30786343)
chr5 (524-620)||(5079068-5079165)
chr5 (506-582)||(9333604-9333680)
chr5 (506-572)||(17535352-17535418)
chr5 (506-582)||(12042220-12042296)
chr5 (522-582)||(17037540-17037600)
chr5 (522-582)||(31069005-31069065)
chr5 (524-620)||(7410823-7410920)
chr5 (506-601)||(19984976-19985071)
chr5 (512-566)||(11833300-11833354)
chr5 (522-578)||(23679438-23679494)
chr5 (522-578)||(23855317-23855373)
chr5 (506-569)||(12004566-12004628)
chr5 (520-566)||(28080095-28080141)
chr5 (506-582)||(31571010-31571086)
chr5 (522-563)||(31406413-31406454)
chr5 (506-582)||(10869419-10869494)
chr5 (506-569)||(30655231-30655295)
chr5 (506-566)||(38450025-38450085)
[»] scaffold0576 (1 HSPs)
scaffold0576 (524-620)||(6698-6795)
[»] scaffold0684 (1 HSPs)
scaffold0684 (522-578)||(794-850)
[»] scaffold0069 (1 HSPs)
scaffold0069 (534-578)||(40745-40789)


Alignment Details
Target: chr6 (Bit Score: 529; Significance: 0; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 529; E-Value: 0
Query Start/End: Original strand, 9 - 620
Target Start/End: Complemental strand, 6674235 - 6673624
Alignment:
Q  9 aaaggagaccctataaagtttgtatcccaagaa-tccttatgttatgagctgctataagattccagaagggtgttgcaaaggacattgaagcaatgttgg 107  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  6674235 aaaggagaccctataaagtttgtatcccaagaaatccttatgttatgagctgctataagattccggaagggtgttgcaaaggatattgaagcaatgttgg 6674136  T
Q  108 agactcccggatgataaacgtatttggcattgggagcgagatggtctatattccgtttgatcagactaccactttcagaaagaggaagagaatatagcta 207  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||| |||||    
T  6674135 agactcccggatgataaacgtatttgggattgggagcgagatggtctatattccgttggatcagcctaccactttcagaaagaggaaaagaatagagcta 6674036  T
Q  208 ccgcggagccgtccaacactaataatgacggactctggagactcttggatgataaacttatttggagttggggtatgctcattcacaatcatagaggact 307  Q
    |||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||| ||    
T  6674035 ccgcggagccctccaacactaatagtgacggactctggagactcctggatgataaacttatttggagtttgggtatgctcattcgcaatcatagagggct 6673936  T
Q  308 cagatggtgtcttaatttggcaaacgaacaaatgtatgagaacctacacattgaacttcatgctgaggttgttgtcaagtgacttcacggcaaactgaat 407  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6673935 cagatggtgtcttaatttggcaaactaacaaatgtatgagaacctacacattgaacttcatgctgaggttgttgtcaagtgacttcatggcaaactgaat 6673836  T
Q  408 ctgtctgagttagataatgtcattgtagattgtcagtgtttgctgtcaaatatacgtaatgctagagtaagctaaataggtagagctaagaacatactct 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6673835 ctgtctgagttagataatgtcattgtagattgtcagtgtttgctgtcaaatatacgtaatgctagagtaagctaaataggtagagctaagaacatactct 6673736  T
Q  508 acaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgttagtaaaac 607  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||    
T  6673735 acaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaa-aaatttagtaacagttcgttaattgttagtaaaac 6673637  T
Q  608 ccgtgttactaaa 620  Q
    |||||||||||||    
T  6673636 ccgtgttactaaa 6673624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 506 - 623
Target Start/End: Complemental strand, 4485684 - 4485566
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gtaa 604  Q
    |||||||||||||||||| ||||| ||||||||||||| |||||||||||| |||||| |||||| |||||||||||  | |||  ||||||||| ||||    
T  4485684 ctacaacataattaagatctagtatcagttgaaaaatgcaactaaatcaaggaaaatggtactaattaaatttagtaatatttgaataattgttaggtaa 4485585  T
Q  605 aacccgtgttactaaatag 623  Q
    |  |||||||| |||||||    
T  4485584 agtccgtgttattaaatag 4485566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 524 - 620
Target Start/End: Complemental strand, 11936868 - 11936771
Alignment:
Q  524 ttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgttag-taaaacccgtgttactaaa 620  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| | || |||   ||||||||| |||| ||||||||||||||    
T  11936868 ttagtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttagataaagcccgtgttactaaa 11936771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 524 - 620
Target Start/End: Original strand, 16734804 - 16734901
Alignment:
Q  524 ttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gtaaaacccgtgttactaaa 620  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| | || |||   |||||||| ||||| ||||||||||||||    
T  16734804 ttagtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacatttgaacaattgttaggtaaagcccgtgttactaaa 16734901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 522 - 581
Target Start/End: Original strand, 15690435 - 15690494
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagt 581  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  15690435 atttagtaacatttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagt 15690494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 522 - 582
Target Start/End: Original strand, 12591830 - 12591890
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||| ||| |||||||||||    
T  12591830 atttagtaacacttgaaaattgtaactaaatcaagaaaaatgttagtaattaaatttagta 12591890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 507 - 582
Target Start/End: Complemental strand, 9631273 - 9631198
Alignment:
Q  507 tacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    |||||||||||| ||||||||||||| ||||||| | | ||||||||||||| || |||||||| |||||||||||    
T  9631273 tacaacataattgagatttagtaacacttgaaaactattactaaatcaagaagaacgttactaagtaaatttagta 9631198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 506 - 568
Target Start/End: Original strand, 1942550 - 1942612
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttact 568  Q
    |||||||||||||||||||| |||||| |||| || ||||||||||||||||||||| |||||    
T  1942550 ctacaacataattaagatttggtaacatttgataattgtaactaaatcaagaaaaatattact 1942612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 524 - 620
Target Start/End: Original strand, 15361714 - 15361811
Alignment:
Q  524 ttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gtaaaacccgtgttactaaa 620  Q
    ||||||||| || |||| ||||||||||||||||||||||||||||| ||||||||| | || |||   |||||||| ||||| || |||||||||||    
T  15361714 ttagtaacacttaaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaggtaaagccggtgttactaaa 15361811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 522 - 582
Target Start/End: Original strand, 6684091 - 6684151
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||||||||| || |||| ||||||| ||||||||||||||||||||| |||||||||||    
T  6684091 atttagtaacacttaaaaattgtaacttaatcaagaaaaatgttactaattaaatttagta 6684151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 537 - 620
Target Start/End: Complemental strand, 11948835 - 11948751
Alignment:
Q  537 aaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgttag-taaaacccgtgttactaaa 620  Q
    |||| ||||||||||||||||||||||||||||| ||||||||| | || |||   ||||||||| |||| ||||||||||||||    
T  11948835 aaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttagataaagcccgtgttactaaa 11948751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 522 - 578
Target Start/End: Complemental strand, 14669449 - 14669393
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaattt 578  Q
    |||||| |||| ||||||| ||||||||||||||||||||||||||||| |||||||    
T  14669449 atttagcaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaattt 14669393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 506 - 629
Target Start/End: Complemental strand, 23264617 - 23264491
Alignment:
Q  506 ctacaacataattaagatttagtaacagt--tgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gt 602  Q
    ||||||||||||| |||| |||||| | |  |||||| ||| ||||||||||||||| ||||||||| ||||||||||| || | |   |||||||| ||    
T  23264617 ctacaacataattgagatctagtaagaatattgaaaattgttactaaatcaagaaaattgttactaattaaatttagtaacattcgaacaattgttaggt 23264518  T
Q  603 aaaacccgtgttactaaatagcatcag 629  Q
    |||| ||||||||||||| ||| ||||    
T  23264517 aaaatccgtgttactaaagagcttcag 23264491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 506 - 582
Target Start/End: Complemental strand, 29668036 - 29667958
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatc--aagaaaaatgttactaaataaatttagta 582  Q
    ||||||||||||| |||| | |||||| ||||||| |||||| |||||  ||||||||||||||||| |||||||||||    
T  29668036 ctacaacataattgagatcttgtaacaattgaaaattgtaacgaaatcaaaagaaaaatgttactaattaaatttagta 29667958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 508 - 582
Target Start/End: Complemental strand, 23904469 - 23904395
Alignment:
Q  508 acaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||||||||| |||| |||||||| ||||||| ||  ||||||| |||||||| |||||||||| |||||||||    
T  23904469 acaacataattgagatctagtaacacttgaaaattgctactaaatgaagaaaaaagttactaaatcaatttagta 23904395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 522 - 570
Target Start/End: Complemental strand, 17719826 - 17719778
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaa 570  Q
    |||||| |||| ||||||| |||||||||||||||||||||||||||||    
T  17719826 atttagcaacacttgaaaattgtaactaaatcaagaaaaatgttactaa 17719778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 567
Target Start/End: Original strand, 4591138 - 4591192
Alignment:
Q  513 ataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttac 567  Q
    |||||||| ||||||||||| ||||||| | | ||||||||||||||||||||||    
T  4591138 ataattaacatttagtaacatttgaaaattattactaaatcaagaaaaatgttac 4591192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 520 - 570
Target Start/End: Original strand, 34374820 - 34374870
Alignment:
Q  520 agatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaa 570  Q
    ||||| ||||||| || |||||||||| |||||||||||||||||||||||    
T  34374820 agattaagtaacaattaaaaaatgtaattaaatcaagaaaaatgttactaa 34374870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 2e-32; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 519 - 629
Target Start/End: Complemental strand, 1613319 - 1613208
Alignment:
Q  519 aagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gtaaaacccgtgttact 617  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||   |||| ||| ||||| ||| |||||||    
T  1613319 aagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtaacagttgaccaatttttaggtaaagcccctgttact 1613220  T
Q  618 aaatagcatcag 629  Q
    ||||||| ||||    
T  1613219 aaatagcttcag 1613208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 506 - 582
Target Start/End: Original strand, 5498459 - 5498535
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||    
T  5498459 ctacaacataattgagatttagtaacaattaaaaaatgtaactaaatcaagaaaaatgttactaattaaatttagta 5498535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 506 - 631
Target Start/End: Complemental strand, 16457450 - 16457324
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gtaa 604  Q
    ||||||||| ||| ||||| |  |||| ||||||| ||||||||||||||||||||||||||||| ||||||||||| || |||   |||||||| ||||    
T  16457450 ctacaacatgattgagattcaacaacaattgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagtaacatttgagcaattgttaggtaa 16457351  T
Q  605 aacccgtgttactaaatagcatcagta 631  Q
    | | |||||||||||| ||| ||||||    
T  16457350 agctcgtgttactaaaaagcttcagta 16457324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 506 - 582
Target Start/End: Complemental strand, 27259564 - 27259488
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||||||||||| ||||||||||||| ||||||| | | ||||||||||| ||||||||||||| |||||||||||    
T  27259564 ctacaacataattgagatttagtaacaattgaaaactattactaaatcaagcaaaatgttactaattaaatttagta 27259488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 522 - 620
Target Start/End: Original strand, 13845989 - 13846088
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gtaaaacccgtgttactaaa 620  Q
    |||||| |||| ||||||| ||||||||||||||||||||||||||||| ||||||||| | || |||   |||||||| ||||| ||||||||||||||    
T  13845989 atttagcaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaggtaaagcccgtgttactaaa 13846088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 524 - 620
Target Start/End: Complemental strand, 7407855 - 7407758
Alignment:
Q  524 ttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gtaaaacccgtgttactaaa 620  Q
    ||||||||| ||||||| ||||||||||||||||||||| ||||||| ||||||||| | || |||   |||||||| ||||| ||||||||||||||    
T  7407855 ttagtaacacttgaaaattgtaactaaatcaagaaaaatattactaattaaatttagcaacacttgaacaattgttaggtaaagcccgtgttactaaa 7407758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 522 - 582
Target Start/End: Complemental strand, 1628050 - 1627990
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||||||||| ||||||| ||||||||||||||||||||| ||||||| |||||||||||    
T  1628050 atttagtaacacttgaaaattgtaactaaatcaagaaaaatattactaattaaatttagta 1627990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 524 - 580
Target Start/End: Original strand, 1654575 - 1654631
Alignment:
Q  524 ttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttag 580  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||    
T  1654575 ttagtaacaattgaaaattgtaactaaatcaagaaaaatgttactaattaaatttag 1654631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 506 - 581
Target Start/End: Complemental strand, 9633561 - 9633486
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagt 581  Q
    ||||||||||||| ||||||||||||| ||||||| | | |||||||| | |||||||||||||| ||||||||||    
T  9633561 ctacaacataattgagatttagtaacacttgaaaactattactaaatcgaaaaaaatgttactaattaaatttagt 9633486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 527 - 620
Target Start/End: Original strand, 2550168 - 2550262
Alignment:
Q  527 gtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gtaaaacccgtgttactaaa 620  Q
    |||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| | || |||   |||||||| ||||| || |||||||||||    
T  2550168 gtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaggtaaagcctgtgttactaaa 2550262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 526 - 582
Target Start/End: Original strand, 26707860 - 26707916
Alignment:
Q  526 agtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||||| |||||||  || ||||||||||||||||||||||||| |||||||||||    
T  26707860 agtaacatttgaaaatggttactaaatcaagaaaaatgttactaattaaatttagta 26707916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 507 - 623
Target Start/End: Complemental strand, 27713554 - 27713440
Alignment:
Q  507 tacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gtaaa 605  Q
    |||| ||||||| ||||||||||||| || |||||||||||||| ||   ||||| |||||||| ||||||||||| || ||   ||||||||| | |||    
T  27713554 tacagcataattgagatttagtaacatttaaaaaatgtaactaattc---aaaaaagttactaattaaatttagtaacatttaaataattgttaggcaaa 27713458  T
Q  606 acccgtgttactaaatag 623  Q
    |||  |||||||||||||    
T  27713457 acctatgttactaaatag 27713440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 542 - 582
Target Start/End: Complemental strand, 2943297 - 2943257
Alignment:
Q  542 tgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||| ||||||||||||||||||||||| |||||||||||    
T  2943297 tgtaattaaatcaagaaaaatgttactaattaaatttagta 2943257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 549 - 582
Target Start/End: Original strand, 35083000 - 35083033
Alignment:
Q  549 aaatcaagaaaaatgttactaaataaatttagta 582  Q
    |||||||||||||||||| |||||||||||||||    
T  35083000 aaatcaagaaaaatgttagtaaataaatttagta 35083033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 7e-26; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 506 - 621
Target Start/End: Original strand, 41573374 - 41573490
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gtaa 604  Q
    |||||||| |||| ||||||||||||| |  |||||||||||||||||||||||||||||||||| ||||||||||| |||||    |||||||| ||||    
T  41573374 ctacaacaaaattgagatttagtaacattcaaaaaatgtaactaaatcaagaaaaatgttactaattaaatttagtaacagttaaacaattgttaggtaa 41573473  T
Q  605 aacccgtgttactaaat 621  Q
    | |||||||||||||||    
T  41573474 accccgtgttactaaat 41573490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 524 - 620
Target Start/End: Complemental strand, 31342817 - 31342720
Alignment:
Q  524 ttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgttag-taaaacccgtgttactaaa 620  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| | || |||   ||||||||| |||| ||||||||||||||    
T  31342817 ttagtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttagataaagcccgtgttactaaa 31342720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 522 - 582
Target Start/End: Original strand, 30267000 - 30267060
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||| ||| |||||||||||    
T  30267000 atttagtaacacttgaaaattgtaactaaatcaagaaaaatgttagtaattaaatttagta 30267060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 509 - 631
Target Start/End: Original strand, 11017441 - 11017564
Alignment:
Q  509 caacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gtaaaac 607  Q
    |||||||||| |||| |||||||| |||||||  || ||||||| ||||||| ||||||||| ||||||||||| || |||   |||||||| |||||      
T  11017441 caacataattgagatctagtaacaattgaaaaccgttactaaataaagaaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagt 11017540  T
Q  608 ccgtgttactaaatagcatcagta 631  Q
    ||||||||||||| ||| ||||||    
T  11017541 ccgtgttactaaaaagcttcagta 11017564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 522 - 582
Target Start/End: Original strand, 7718182 - 7718242
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||||||| | ||||||| ||||||||||||||||||||| ||||||| |||||||||||    
T  7718182 atttagtaatacttgaaaattgtaactaaatcaagaaaaatattactaattaaatttagta 7718242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 522 - 582
Target Start/End: Original strand, 44920955 - 44921014
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||||||||| ||||||| |||||||||||||| |||||||||||||| |||||||||||    
T  44920955 atttagtaacacttgaaaattgtaactaaatcaa-aaaaatgttactaattaaatttagta 44921014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 510 - 582
Target Start/End: Original strand, 24479137 - 24479209
Alignment:
Q  510 aacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||||||| |||| |||||||| ||||||| | | |||||||||||| || ||||||||| |||||||||||    
T  24479137 aacataattgagatatagtaacacttgaaaattattactaaatcaagataactgttactaattaaatttagta 24479209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 522 - 620
Target Start/End: Original strand, 15513664 - 15513763
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gtaaaacccgtgttactaaa 620  Q
    ||||||||||| || |||| ||||| ||||||||||||||||||||||  ||||||| ||| || |||   |||||||| ||||| | ||||||||||||    
T  15513664 atttagtaacaattaaaaattgtaagtaaatcaagaaaaatgttactagttaaattttgtaacacttgaacaattgttaggtaaagctcgtgttactaaa 15513763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 525 - 601
Target Start/End: Original strand, 40016591 - 40016667
Alignment:
Q  525 tagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgttag 601  Q
    |||||||| ||||||| | | | ||||||||| ||||||||||| | ||||||||||| || |||  ||||||||||    
T  40016591 tagtaacacttgaaaattattattaaatcaagtaaaatgttactgattaaatttagtaacatttgaataattgttag 40016667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 1e-24; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 506 - 631
Target Start/End: Original strand, 6403574 - 6403700
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gtaa 604  Q
    ||||||||| ||||||||||||||||| ||||||  ||||||||||| ||||||||||||||||| ||||||||||| || |||   |||||||| ||||    
T  6403574 ctacaacatgattaagatttagtaacaattgaaatttgtaactaaattaagaaaaatgttactaattaaatttagtaacatttgagcaattgttaggtaa 6403673  T
Q  605 aacccgtgttactaaatagcatcagta 631  Q
    | ||||||||| |||| ||| ||||||    
T  6403674 agcccgtgttattaaaaagcttcagta 6403700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 506 - 620
Target Start/End: Original strand, 29553610 - 29553725
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgttag-taa 604  Q
    ||||||||| ||| ||||||||||||| ||||||| |||||| |||||||||||||||||||||| ||||||||| | || |||   ||||||||| |||    
T  29553610 ctacaacatgattgagatttagtaacaattgaaaattgtaaccaaatcaagaaaaatgttactaattaaatttagcaacatttgagcaattgttagttaa 29553709  T
Q  605 aacccgtgttactaaa 620  Q
    | | ||||||||||||    
T  29553710 agcgcgtgttactaaa 29553725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 524 - 620
Target Start/End: Original strand, 25638806 - 25638903
Alignment:
Q  524 ttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gtaaaacccgtgttactaaa 620  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| | || |||   |||||||| ||||||||| ||||||||||    
T  25638806 ttagtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaggtaaaacccatgttactaaa 25638903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 524 - 620
Target Start/End: Complemental strand, 28249176 - 28249079
Alignment:
Q  524 ttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gtaaaacccgtgttactaaa 620  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| | || |||   |||||||| ||||| ||||||||||||||    
T  28249176 ttagtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaggtaaagcccgtgttactaaa 28249079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 506 - 620
Target Start/End: Complemental strand, 6801949 - 6801834
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gtaa 604  Q
    ||||||||||  | ||||||||||||| ||||||| | | |||||||||| |||||||||||||| ||||||||||| ||||||   |||||||| ||||    
T  6801949 ctacaacatagatgagatttagtaacacttgaaaactattactaaatcaataaaaatgttactaattaaatttagtaacagttgaacaattgttaggtaa 6801850  T
Q  605 aacccgtgttactaaa 620  Q
    | ||| ||||||||||    
T  6801849 agcccctgttactaaa 6801834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 522 - 620
Target Start/End: Complemental strand, 17634574 - 17634475
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gtaaaacccgtgttactaaa 620  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||| || || |||   ||||| || ||||| ||||||||||||||    
T  17634574 atttagtaacatttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttaataacacttgaacaattgataggtaaagcccgtgttactaaa 17634475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 509 - 619
Target Start/End: Original strand, 31347333 - 31347444
Alignment:
Q  509 caacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgttag-taaaac 607  Q
    |||||| ||| | ||||||||||| ||||||| |||||| ||||||||||||||| |||||| ||||||||||| || ||| | ||||||||| |||| |    
T  31347333 caacatgattgaaatttagtaacaattgaaaattgtaaccaaatcaagaaaaatgctactaattaaatttagtaacatttgatcaattgttagataaatc 31347432  T
Q  608 ccgtgttactaa 619  Q
    | ||||||||||    
T  31347433 ctgtgttactaa 31347444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 522 - 580
Target Start/End: Original strand, 5528740 - 5528798
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttag 580  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||    
T  5528740 atttagtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttag 5528798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 527 - 620
Target Start/End: Complemental strand, 45356210 - 45356116
Alignment:
Q  527 gtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gtaaaacccgtgttactaaa 620  Q
    |||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| | || |||   |||||||| ||||| ||||||||||||||    
T  45356210 gtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaggtaaagcccgtgttactaaa 45356116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 522 - 578
Target Start/End: Complemental strand, 19370013 - 19369957
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaattt 578  Q
    |||||| |||| ||||||| ||||||||||||||||||||||||||||| |||||||    
T  19370013 atttagcaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaattt 19369957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 522 - 578
Target Start/End: Original strand, 19448445 - 19448501
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaattt 578  Q
    |||||| |||| ||||||| ||||||||||||||||||||||||||||| |||||||    
T  19448445 atttagcaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaattt 19448501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 522 - 578
Target Start/End: Complemental strand, 19532631 - 19532575
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaattt 578  Q
    |||||| |||| ||||||| ||||||||||||||||||||||||||||| |||||||    
T  19532631 atttagcaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaattt 19532575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 522 - 620
Target Start/End: Original strand, 25637641 - 25637740
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gtaaaacccgtgttactaaa 620  Q
    ||||||||||| ||||||| ||||||||||| ||||||| ||||||||| ||||||||| | || | |   |||||||| ||||| ||||||||||||||    
T  25637641 atttagtaacacttgaaaattgtaactaaattaagaaaactgttactaattaaatttagcaacactcgaacaattgttaggtaaagcccgtgttactaaa 25637740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 509 - 616
Target Start/End: Complemental strand, 5651061 - 5650953
Alignment:
Q  509 caacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gtaaaac 607  Q
    |||||||||| || || ||||||| ||||||| | | ||||||||||||||||||||||||| | ||||||| | || |||   |||||||| |||||||    
T  5651061 caacataattgagtttcagtaacacttgaaaactattactaaatcaagaaaaatgttactaattcaatttagcaacatttgaacaattgttaggtaaaac 5650962  T
Q  608 ccgtgttac 616  Q
    || ||||||    
T  5650961 ccttgttac 5650953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 526 - 582
Target Start/End: Original strand, 29345432 - 29345488
Alignment:
Q  526 agtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||||| | ||||| ||||||||||||||||||||| ||||||| |||||||||||    
T  29345432 agtaacactcgaaaattgtaactaaatcaagaaaaatattactaattaaatttagta 29345488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 506 - 581
Target Start/End: Complemental strand, 31369225 - 31369150
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagt 581  Q
    |||||||| | || ||||||| ||||| |||||||||| |||||||||| || |||||||||||| ||| ||||||    
T  31369225 ctacaacaaagttgagatttaataacatttgaaaaatgaaactaaatcacgataaatgttactaattaagtttagt 31369150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 522 - 578
Target Start/End: Original strand, 18766914 - 18766970
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaattt 578  Q
    |||||| |||| ||||||| ||||||||||||||||||||| ||| ||| |||||||    
T  18766914 atttagcaacacttgaaaattgtaactaaatcaagaaaaatattattaattaaattt 18766970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 506 - 569
Target Start/End: Complemental strand, 19341540 - 19341476
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaa-aaatgttacta 569  Q
    ||||||||||  ||||||||||||||| || |||| |||||||||||||| || |||||||||||    
T  19341540 ctacaacatatataagatttagtaacaattcaaaattgtaactaaatcaaaaataaatgttacta 19341476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 582
Target Start/End: Original strand, 5000661 - 5000736
Alignment:
Q  507 tacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    |||||||||||| |||| |||| ||| ||||||| ||| |||| ||||  |||| ||||||||| |||||||||||    
T  5000661 tacaacataattgagatctagttacaattgaaaattgttactacatcatcaaaattgttactaattaaatttagta 5000736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 2e-23; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 506 - 582
Target Start/End: Original strand, 3234308 - 3234384
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||| |||||||||    
T  3234308 ctacagcataattaagatttagtaacagttgaaaaatgtaactaaataaaaaaaaatggtactaaattaatttagta 3234384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 506 - 572
Target Start/End: Complemental strand, 14803179 - 14803113
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaat 572  Q
    |||||||| |||| |||| ||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  14803179 ctacaacaaaattgagatctagtaacggttgaaaaatgtaactaaatcaagaaaaatgttgctaaat 14803113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 506 - 572
Target Start/End: Complemental strand, 15250173 - 15250107
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaat 572  Q
    |||||||| |||| |||| ||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  15250173 ctacaacaaaattgagatctagtaacggttgaaaaatgtaactaaatcaagaaaaatgttgctaaat 15250107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 524 - 620
Target Start/End: Complemental strand, 4685504 - 4685407
Alignment:
Q  524 ttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gtaaaacccgtgttactaaa 620  Q
    ||||||||| ||||||| ||||||||||||||||||||||||| ||| ||||||||| | || |||   |||||||| ||||| ||||| ||||||||    
T  4685504 ttagtaacacttgaaaattgtaactaaatcaagaaaaatgttagtaattaaatttagcaacacttgaacaattgttaggtaaagcccgtattactaaa 4685407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 522 - 582
Target Start/End: Complemental strand, 26205518 - 26205458
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||||| ||| ||||||| | ||||||||||||||||||||||||||| |||||||||||    
T  26205518 atttagtgacacttgaaaattataactaaatcaagaaaaatgttactaattaaatttagta 26205458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 522 - 582
Target Start/End: Complemental strand, 26225081 - 26225021
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||| ||||| ||||||| |||||||||||||||||||||| |||||| |||||||||||    
T  26225081 atttaataacacttgaaaattgtaactaaatcaagaaaaatgatactaattaaatttagta 26225021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 506 - 620
Target Start/End: Complemental strand, 26608658 - 26608543
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgttag-taa 604  Q
    ||||||||||||| | || |||||||| ||||||| ||| |  |||||||||||||||||||| | ||||||||||| || |||   ||||||||| |||    
T  26608658 ctacaacataattgacatctagtaacatttgaaaattgttatgaaatcaagaaaaatgttactgattaaatttagtaacatttgaacaattgttagataa 26608559  T
Q  605 aacccgtgttactaaa 620  Q
    | ||| ||||||||||    
T  26608558 agcccatgttactaaa 26608543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 506 - 620
Target Start/End: Original strand, 30089716 - 30089831
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgttagtaaa 605  Q
    |||||| |||||| | || |||||||| ||||||| ||| ||||||||||||||||||||||| | || |||||||| || |||   ||||||||| |||    
T  30089716 ctacaaaataattgacatctagtaacacttgaaaactgttactaaatcaagaaaaatgttactgattatatttagtaacatttgaacaattgttaggaaa 30089815  T
Q  606 a-cccgtgttactaaa 620  Q
    | ||| ||||||||||    
T  30089816 agcccatgttactaaa 30089831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 522 - 578
Target Start/End: Complemental strand, 9242587 - 9242531
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaattt 578  Q
    |||||| |||| ||||||| ||||||||||||||||||| ||||||||| |||||||    
T  9242587 atttagcaacacttgaaaattgtaactaaatcaagaaaattgttactaattaaattt 9242531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 522 - 582
Target Start/End: Original strand, 10022121 - 10022181
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||||||||| ||||||| |||||||||||||  |||||||||||||| ||| |||||||    
T  10022121 atttagtaacaattgaaaattgtaactaaatcagaaaaaatgttactaattaagtttagta 10022181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 509 - 582
Target Start/End: Complemental strand, 20277476 - 20277403
Alignment:
Q  509 caacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||||||||| ||  |||||||| | ||||| |||||||||||||| |||||| ||| ||| |||||||||||    
T  20277476 caacataattatgaactagtaacactcgaaaattgtaactaaatcaaaaaaaatattattaattaaatttagta 20277403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 506 - 579
Target Start/End: Complemental strand, 26619221 - 26619149
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaattta 579  Q
    ||||||||||||| | || |||||||| ||||||  ||| ||||||||||||||||||||||| | ||||||||    
T  26619221 ctacaacataattgacatctagtaacacttgaaat-tgttactaaatcaagaaaaatgttactgattaaattta 26619149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 525 - 580
Target Start/End: Complemental strand, 26621191 - 26621136
Alignment:
Q  525 tagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttag 580  Q
    |||||||| ||||||| ||| ||||||| ||||||||||||||| | |||||||||    
T  26621191 tagtaacacttgaaaattgttactaaattaagaaaaatgttactgattaaatttag 26621136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 522 - 582
Target Start/End: Original strand, 16170268 - 16170328
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    |||||| |||| ||||||| |||||| ||||||  |||| ||||||||| |||||||||||    
T  16170268 atttagcaacacttgaaaattgtaaccaaatcacaaaaagtgttactaattaaatttagta 16170328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 566
Target Start/End: Complemental strand, 29932467 - 29932407
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgtta 566  Q
    |||||||||||||  | |||||||||| ||||||||| | ||||||||  |||||||||||    
T  29932467 ctacaacataattgcgttttagtaacatttgaaaaatattactaaatcgcgaaaaatgtta 29932407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 2e-23; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 510 - 582
Target Start/End: Complemental strand, 24559110 - 24559038
Alignment:
Q  510 aacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||    
T  24559110 aacataattgagatttagtaacaattaaaaaatgtaactaaatcaagaaaaatgttactaattaaatttagta 24559038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 522 - 582
Target Start/End: Complemental strand, 47066137 - 47066077
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||| ||| |||||||||||    
T  47066137 atttagtaacacttgaaaattgtaactaaatcaagaaaaatgttagtaattaaatttagta 47066077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 506 - 620
Target Start/End: Complemental strand, 4881188 - 4881073
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gtaa 604  Q
    ||||||||||||| | ||  ||||||| ||||||| ||| ||||||||||||||||||||||| | |||||||||||  | |||  ||||||||| ||||    
T  4881188 ctacaacataattgacatccagtaacacttgaaaattgttactaaatcaagaaaaatgttactgattaaatttagtaatatttgtataattgttaggtaa 4881089  T
Q  605 aacccgtgttactaaa 620  Q
    |  |||||||||||||    
T  4881088 agtccgtgttactaaa 4881073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 527 - 620
Target Start/End: Original strand, 43600269 - 43600363
Alignment:
Q  527 gtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gtaaaacccgtgttactaaa 620  Q
    |||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| |  | |||   |||||||| ||||| ||||||||||||||    
T  43600269 gtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaaaacttgaacaattgttaggtaaagcccgtgttactaaa 43600363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 522 - 578
Target Start/End: Complemental strand, 1685055 - 1684999
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaattt 578  Q
    |||||| |||| ||||||| ||||||||||||||||||||||||||||| |||||||    
T  1685055 atttagcaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaattt 1684999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 522 - 582
Target Start/End: Original strand, 53300348 - 53300408
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||||||||| ||||||| ||||| ||||||||||||||||||| ||| |||||||||||    
T  53300348 atttagtaacacttgaaaattgtaattaaatcaagaaaaatgttagtaattaaatttagta 53300408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 522 - 578
Target Start/End: Original strand, 1152041 - 1152097
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaattt 578  Q
    |||||| |||| ||||||| ||||||||||| ||||||||||||||||| |||||||    
T  1152041 atttagcaacacttgaaaattgtaactaaattaagaaaaatgttactaattaaattt 1152097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 568
Target Start/End: Complemental strand, 4923752 - 4923690
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttact 568  Q
    ||||||||||||||| ||  ||||||| || |||| ||| |||||||||||||||||||||||    
T  4923752 ctacaacataattaacatccagtaacacttaaaaattgttactaaatcaagaaaaatgttact 4923690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 582
Target Start/End: Complemental strand, 26075368 - 26075293
Alignment:
Q  507 tacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    |||||||||||| | || || ||||| ||||||| ||| |||| ||||||||||  |||||||| |||||||||||    
T  26075368 tacaacataattgaaatctaataacaattgaaaattgttactagatcaagaaaatggttactaagtaaatttagta 26075293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 512 - 582
Target Start/End: Complemental strand, 4904253 - 4904183
Alignment:
Q  512 cataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||||||| ||  ||||||| || |||| ||| ||||||||| ||||||||||||| | |||||||||||    
T  4904253 cataattaacatccagtaacacttaaaaattgttactaaatcatgaaaaatgttactgattaaatttagta 4904183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 542 - 582
Target Start/End: Complemental strand, 21539354 - 21539314
Alignment:
Q  542 tgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||||||||||||| ||||||||||| | |||||||||||    
T  21539354 tgtaactaaatcaaggaaaatgttactgattaaatttagta 21539314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 534 - 582
Target Start/End: Original strand, 48464049 - 48464097
Alignment:
Q  534 ttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||||| ||| ||||||| || |||||||||||||| |||||||||||    
T  48464049 ttgaaaattgttactaaataaataaaaatgttactaattaaatttagta 48464097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 7e-23; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 506 - 620
Target Start/End: Original strand, 12189933 - 12190048
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gtaa 604  Q
    ||||||||||||| ||| |||| |||| || |||||||||||||||||||||||||| ||||||| ||||||||||| || |||   |||||||| ||||    
T  12189933 ctacaacataattgagaattagaaacaattaaaaaatgtaactaaatcaagaaaaatattactaattaaatttagtaacatttgaacaattgttaggtaa 12190032  T
Q  605 aacccgtgttactaaa 620  Q
    | ||||||||||||||    
T  12190033 agcccgtgttactaaa 12190048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 522 - 620
Target Start/End: Original strand, 16222775 - 16222874
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gtaaaacccgtgttactaaa 620  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||  |||||||||| || |||  ||||||||| ||||| ||||||||||||||    
T  16222775 atttagtaacatttgaaaattgtaactaaatcaagaaaaatgttactaataaaatttagtaacacttgaataattgttaggtaaagcccgtgttactaaa 16222874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 28636884 - 28636979
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgttag 601  Q
    |||||||||||||||||| |||||||| || |||| ||||||||||||||||||||||||||||| | ||||||||| || |||  ||||||||||    
T  28636884 ctacaacataattaagatctagtaacatttaaaaattgtaactaaatcaagaaaaatgttactaattcaatttagtaacatttgaataattgttag 28636979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 506 - 582
Target Start/End: Original strand, 897436 - 897512
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    |||||||||||||||||| |||| ||||||||||| ||| ||||||| |||||||||||| |||| |||||||||||    
T  897436 ctacaacataattaagatatagttacagttgaaaattgttactaaatgaagaaaaatgttcctaattaaatttagta 897512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 506 - 582
Target Start/End: Complemental strand, 5911783 - 5911707
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||||||| |||| ||| |||||||| ||||||| | ||||||||||||||||||||||||| | |||||||||||    
T  5911783 ctacaacatgattatgatatagtaacacttgaaaattttaactaaatcaagaaaaatgttactgattaaatttagta 5911707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 522 - 580
Target Start/End: Original strand, 51758750 - 51758808
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttag 580  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||| ||| |||||||||    
T  51758750 atttagtaacatttgaaaattgtaactaaatcaagaaaaatgttagtaattaaatttag 51758808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 522 - 582
Target Start/End: Original strand, 15214324 - 15214384
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||||||||| ||||||| || |||||||||||||||||| ||||||| |||||||||||    
T  15214324 atttagtaacacttgaaaattgcaactaaatcaagaaaaattttactaattaaatttagta 15214384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 522 - 582
Target Start/End: Complemental strand, 37097443 - 37097383
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||| |  ||||||||||    
T  37097443 atttagtaacacttgaaaattgtaactaaatcaagaaaaatgttactgataaaatttagta 37097383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 534 - 620
Target Start/End: Original strand, 13208621 - 13208708
Alignment:
Q  534 ttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gtaaaacccgtgttactaaa 620  Q
    ||||||| ||||| ||||| ||||||||||||||||| ||||||||||| || |||    ||||||| ||||||||||||||||||||    
T  13208621 ttgaaaattgtaattaaattaagaaaaatgttactaattaaatttagtaccacttgaaccattgttaggtaaaacccgtgttactaaa 13208708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 509 - 581
Target Start/End: Complemental strand, 39368756 - 39368684
Alignment:
Q  509 caacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagt 581  Q
    |||||||||| | || |||||||   |||||||||| ||||||||||||||||||||||||| |||| |||||    
T  39368756 caacataattgacatctagtaacccatgaaaaatgttactaaatcaagaaaaatgttactaattaaaattagt 39368684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 522 - 579
Target Start/End: Original strand, 15193916 - 15193973
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaattta 579  Q
    ||||||||||| |||||||  | ||| |||||||||||||||||||||| ||||||||    
T  15193916 atttagtaacacttgaaaatagcaacgaaatcaagaaaaatgttactaattaaattta 15193973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 510 - 567
Target Start/End: Original strand, 18308133 - 18308190
Alignment:
Q  510 aacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttac 567  Q
    ||||||||| | || |||||||| ||||||| ||| ||||||||||||||||||||||    
T  18308133 aacataattgacatctagtaacatttgaaaattgttactaaatcaagaaaaatgttac 18308190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 545 - 624
Target Start/End: Original strand, 3399642 - 3399722
Alignment:
Q  545 aactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gtaaaacccgtgttactaaatagc 624  Q
    |||||||||| ||||||||||||||| ||||||||||| || |||   |||||||| |||||| |  ||||||||||||||    
T  3399642 aactaaatcatgaaaaatgttactaattaaatttagtaacatttgaacaattgttaggtaaaatctatgttactaaatagc 3399722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 544 - 582
Target Start/End: Original strand, 15204613 - 15204651
Alignment:
Q  544 taactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  15204613 taactaaatcaagaaaaatgttgctaactaaatttagta 15204651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 501 - 562
Target Start/End: Original strand, 17112901 - 17112962
Alignment:
Q  501 atactctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaat 562  Q
    |||| ||||||||||||| | || |||||| | ||||||| ||| |||||||||||||||||    
T  17112901 atacactacaacataattgaaatctagtaataattgaaaattgttactaaatcaagaaaaat 17112962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 506 - 631
Target Start/End: Original strand, 8726 - 8850
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgttagtaaa 605  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||| ||| ||||| || ||    |||| || |  ||    
T  8726 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaat-aaacaaaatgttactaaatgaatatagtaacatttaaccaattatttggcaa 8824  T
Q  606 acccgtgttactaaatagcatcagta 631  Q
    |||| |||||||||||||| ||||||    
T  8825 acccctgttactaaatagcttcagta 8850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 4e-21; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 506 - 582
Target Start/End: Complemental strand, 18191968 - 18191892
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    |||||| |||||| ||||||||||||| ||||||| ||||||||||| ||||||||||||||||| |||||||||||    
T  18191968 ctacaaaataattgagatttagtaacaattgaaaattgtaactaaattaagaaaaatgttactaattaaatttagta 18191892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 506 - 620
Target Start/End: Complemental strand, 9354508 - 9354393
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gtaa 604  Q
    ||||||||| ||| ||||||||||||| ||||||| ||||||| ||||||||||||||||||||| |||||||| || || |||   |||||||| ||||    
T  9354508 ctacaacatgattgagatttagtaacaattgaaaattgtaactgaatcaagaaaaatgttactaattaaatttaataacatttgagcaattgttaggtaa 9354409  T
Q  605 aacccgtgttactaaa 620  Q
    | ||| ||||||||||    
T  9354408 agcccatgttactaaa 9354393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 30786248 - 30786343
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgttag 601  Q
    |||||||||||||||||| |||||||| ||||||| ||||||| ||||||||||||||||||| | | ||||||||| || |||  ||||||||||    
T  30786248 ctacaacataattaagatctagtaacacttgaaaattgtaacttaatcaagaaaaatgttactgattcaatttagtaacatttgaataattgttag 30786343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 524 - 620
Target Start/End: Complemental strand, 5079165 - 5079068
Alignment:
Q  524 ttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gtaaaacccgtgttactaaa 620  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| | || |||   |||||||| ||||| ||||||||||||||    
T  5079165 ttagtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaggtaaagcccgtgttactaaa 5079068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 506 - 582
Target Start/End: Complemental strand, 9333680 - 9333604
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||||||| ||| |||||| |||||| ||||||| |||||| |||||||||||||||||||||| |||||||||||    
T  9333680 ctacaacatgattgagattttgtaacaattgaaaattgtaacaaaatcaagaaaaatgttactaattaaatttagta 9333604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 506 - 572
Target Start/End: Original strand, 17535352 - 17535418
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaat 572  Q
    |||||||| |||| |||| ||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  17535352 ctacaacaaaattgagatctagtaacggttgaaaaatgtaactaaatcaagaaaaatgttgctaaat 17535418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 506 - 582
Target Start/End: Complemental strand, 12042296 - 12042220
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||||||||||||||||  ||||| | ||||||| ||||||||||||||||||||||||||| | | |||||||||    
T  12042296 ctacaacataattaagatccagtaatatttgaaaattgtaactaaatcaagaaaaatgttactgattcaatttagta 12042220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 522 - 582
Target Start/End: Original strand, 17037540 - 17037600
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||||||||| |||||||  |||||||||||||||||||||||||||| |||||||||||    
T  17037540 atttagtaacacttgaaaatcgtaactaaatcaagaaaaatgttactaattaaatttagta 17037600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 522 - 582
Target Start/End: Complemental strand, 31069065 - 31069005
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||||||||| || |||| ||||||||||||||||||||||||||||| |||||||||||    
T  31069065 atttagtaacacttaaaaattgtaactaaatcaagaaaaatgttactaattaaatttagta 31069005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 524 - 620
Target Start/End: Original strand, 7410823 - 7410920
Alignment:
Q  524 ttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gtaaaacccgtgttactaaa 620  Q
    ||||||||| || |||| |||||||||||||| |||||||||||||| ||||||||| | || |||   |||||||| ||||| ||||||||||||||    
T  7410823 ttagtaacatttcaaaattgtaactaaatcaaaaaaaatgttactaattaaatttagcaacacttgaacaattgttaggtaaagcccgtgttactaaa 7410920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 19984976 - 19985071
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgttag 601  Q
    |||||||||||||| ||  |||||||| | |||||  |||||||||||||| ||||||||||||| || |||||||| || |||  ||||||||||    
T  19984976 ctacaacataattatgaactagtaacactcgaaaatggtaactaaatcaaggaaaatgttactaattagatttagtaacatttgaataattgttag 19985071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 512 - 566
Target Start/End: Complemental strand, 11833354 - 11833300
Alignment:
Q  512 cataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgtta 566  Q
    ||||||| ||||||||||||| |||| |||||||||||||||| |||||||||||    
T  11833354 cataattgagatttagtaacatttgacaaatgtaactaaatcatgaaaaatgtta 11833300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 522 - 578
Target Start/End: Original strand, 23679438 - 23679494
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaattt 578  Q
    |||||| |||| ||||||| ||||||||||||||||||||||||| ||| |||||||    
T  23679438 atttagcaacacttgaaaattgtaactaaatcaagaaaaatgttattaattaaattt 23679494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 522 - 578
Target Start/End: Complemental strand, 23855373 - 23855317
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaattt 578  Q
    |||||| |||| ||||||| ||||||||||||||||||||||||| ||| |||||||    
T  23855373 atttagcaacacttgaaaattgtaactaaatcaagaaaaatgttattaattaaattt 23855317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 506 - 569
Target Start/End: Complemental strand, 12004628 - 12004566
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttacta 569  Q
    ||||||||||||| | ||||||||||| ||||||  | ||||||||||||||||||||||||||    
T  12004628 ctacaacataattgaaatttagtaacaattgaaat-tctaactaaatcaagaaaaatgttacta 12004566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 520 - 566
Target Start/End: Original strand, 28080095 - 28080141
Alignment:
Q  520 agatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgtta 566  Q
    ||||||||||||| || |||||||||| |||||||||||||||||||    
T  28080095 agatttagtaacatttaaaaaatgtaattaaatcaagaaaaatgtta 28080141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 506 - 582
Target Start/End: Original strand, 31571010 - 31571086
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||||||||||| | || |||||||| ||||||| ||| | |||| |||||||||||||||| | |||| ||||||    
T  31571010 ctacaacataattgacatctagtaacacttgaaaattgttattaaaacaagaaaaatgttactgattaaaattagta 31571086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 522 - 563
Target Start/End: Complemental strand, 31406454 - 31406413
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatg 563  Q
    |||||| |||| ||||||| ||||||||||||||||||||||    
T  31406454 atttagcaacatttgaaaattgtaactaaatcaagaaaaatg 31406413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 582
Target Start/End: Original strand, 10869419 - 10869494
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagta 582  Q
    ||||||||||||| |||| |||  ||| || |||| |||| |||||||| ||||| ||||||||| |||||||||||    
T  10869419 ctacaacataattgagatctagatacaattaaaaattgta-ctaaatcatgaaaattgttactaattaaatttagta 10869494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 569
Target Start/End: Complemental strand, 30655295 - 30655231
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaa-aaatgttacta 569  Q
    ||||||||||  | ||||||||||||| || |||| |||||||||||||| || |||||||||||    
T  30655295 ctacaacatatatgagatttagtaacacttcaaaattgtaactaaatcaaaaacaaatgttacta 30655231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 566
Target Start/End: Complemental strand, 38450085 - 38450025
Alignment:
Q  506 ctacaacataattaagatttagtaacagttgaaaaatgtaactaaatcaagaaaaatgtta 566  Q
    ||||||||||||| | || ||||||||  |||||| ||| || ||||||||||||||||||    
T  38450085 ctacaacataattgacatctagtaacacatgaaaattgttaccaaatcaagaaaaatgtta 38450025  T

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Target: scaffold0576 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 524 - 620
Target Start/End: Original strand, 6698 - 6795
Alignment:
Q  524 ttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtagcagttggttaattgtta-gtaaaacccgtgttactaaa 620  Q
    ||||||||| || |||| ||||||||||||||||||||||||||||| ||||||||| | || |||   |||||||| ||||| || |||||||||||    
T  6698 ttagtaacacttaaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaggtaaagccggtgttactaaa 6795  T

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Target: scaffold0684 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 522 - 578
Target Start/End: Complemental strand, 850 - 794
Alignment:
Q  522 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaattt 578  Q
    |||||| |||| ||||||| ||||||||||||||||||| ||||||||| |||||||    
T  850 atttagcaacacttgaaaattgtaactaaatcaagaaaattgttactaattaaattt 794  T

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Target: scaffold0069 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 534 - 578
Target Start/End: Complemental strand, 40789 - 40745
Alignment:
Q  534 ttgaaaaatgtaactaaatcaagaaaaatgttactaaataaattt 578  Q
    ||||||| ||||||||||||||||||| ||||||||| |||||||    
T  40789 ttgaaaattgtaactaaatcaagaaaattgttactaattaaattt 40745  T

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