View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5972_low_7 (Length: 453)

Name: NF5972_low_7
Description: NF5972
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5972_low_7
NF5972_low_7
[»] chr3 (57 HSPs)
chr3 (1-437)||(47279052-47279487)
chr3 (37-83)||(30311335-30311381)
chr3 (37-94)||(44743845-44743902)
chr3 (38-82)||(11612329-11612373)
chr3 (30-94)||(14339632-14339696)
chr3 (39-94)||(20501727-20501782)
chr3 (32-83)||(28703405-28703456)
chr3 (31-94)||(40063642-40063705)
chr3 (37-83)||(15048062-15048108)
chr3 (41-83)||(52769984-52770026)
chr3 (30-83)||(2667884-2667937)
chr3 (30-83)||(4222163-4222216)
chr3 (30-83)||(10499110-10499163)
chr3 (38-83)||(39253727-39253772)
chr3 (30-83)||(46518650-46518703)
chr3 (30-83)||(51903879-51903932)
chr3 (38-94)||(12761542-12761598)
chr3 (39-83)||(37051295-37051339)
chr3 (30-90)||(47454611-47454671)
chr3 (37-83)||(10445140-10445186)
chr3 (38-83)||(4844512-4844557)
chr3 (38-83)||(4870208-4870253)
chr3 (37-78)||(7975447-7975488)
chr3 (30-83)||(32651439-32651492)
chr3 (30-83)||(36720403-36720456)
chr3 (38-94)||(5499397-5499453)
chr3 (37-93)||(31520596-31520652)
chr3 (30-81)||(2597223-2597274)
chr3 (44-83)||(3427554-3427593)
chr3 (31-82)||(9557343-9557394)
chr3 (37-83)||(8075128-8075174)
chr3 (49-83)||(14186688-14186722)
chr3 (49-83)||(37788466-37788500)
chr3 (37-83)||(44069787-44069833)
chr3 (37-83)||(54990731-54990777)
chr3 (47-84)||(8170711-8170748)
chr3 (46-83)||(10828734-10828771)
chr3 (38-83)||(11642210-11642255)
chr3 (38-79)||(13808890-13808931)
chr3 (30-83)||(16354893-16354946)
chr3 (47-88)||(17108894-17108935)
chr3 (30-79)||(17554793-17554842)
chr3 (46-83)||(17765165-17765202)
chr3 (46-83)||(19066485-19066522)
chr3 (50-83)||(19154673-19154706)
chr3 (30-83)||(21960573-21960626)
chr3 (30-83)||(27093362-27093415)
chr3 (46-79)||(53412983-53413016)
chr3 (47-79)||(16212977-16213009)
chr3 (37-89)||(16900676-16900728)
chr3 (49-89)||(19716238-19716278)
chr3 (32-64)||(31788990-31789022)
chr3 (47-83)||(33899653-33899689)
chr3 (46-94)||(35111218-35111266)
chr3 (37-89)||(40268518-40268569)
chr3 (30-94)||(47236961-47237025)
chr3 (47-79)||(49452912-49452944)
[»] chr7 (52 HSPs)
chr7 (30-88)||(48771960-48772018)
chr7 (30-83)||(26459411-26459464)
chr7 (30-94)||(11720950-11721014)
chr7 (38-89)||(22760893-22760944)
chr7 (31-94)||(49050481-49050544)
chr7 (30-88)||(15905670-15905727)
chr7 (37-83)||(17041013-17041059)
chr7 (32-81)||(37233575-37233624)
chr7 (30-83)||(43215206-43215259)
chr7 (30-83)||(45709709-45709762)
chr7 (30-86)||(25590633-25590689)
chr7 (30-94)||(43590929-43590993)
chr7 (37-83)||(5934150-5934196)
chr7 (37-83)||(9608630-9608676)
chr7 (37-83)||(9836202-9836248)
chr7 (49-95)||(18056764-18056810)
chr7 (29-83)||(20335832-20335886)
chr7 (37-83)||(29785302-29785348)
chr7 (40-90)||(29916802-29916852)
chr7 (38-83)||(8108611-8108656)
chr7 (38-83)||(21877838-21877883)
chr7 (38-83)||(23552148-23552193)
chr7 (39-88)||(37473645-37473694)
chr7 (30-83)||(39631866-39631919)
chr7 (30-86)||(24513819-24513875)
chr7 (30-86)||(30579357-30579413)
chr7 (30-90)||(37085543-37085603)
chr7 (32-79)||(279959-280005)
chr7 (38-81)||(7801210-7801253)
chr7 (44-83)||(9183192-9183231)
chr7 (49-88)||(25132374-25132413)
chr7 (32-79)||(26703149-26703196)
chr7 (49-88)||(31835233-31835272)
chr7 (30-93)||(42711980-42712043)
chr7 (37-83)||(18363725-18363771)
chr7 (30-76)||(21854570-21854616)
chr7 (38-80)||(41519268-41519310)
chr7 (38-83)||(3174957-3175002)
chr7 (37-78)||(5579240-5579281)
chr7 (38-83)||(15137583-15137628)
chr7 (38-83)||(25655229-25655274)
chr7 (30-83)||(33222392-33222445)
chr7 (37-94)||(38374589-38374646)
chr7 (30-83)||(39499720-39499773)
chr7 (38-75)||(42262104-42262141)
chr7 (37-94)||(48125165-48125221)
chr7 (39-83)||(13106783-13106826)
chr7 (30-74)||(25021345-25021389)
chr7 (37-65)||(34898482-34898510)
chr7 (39-83)||(37693692-37693735)
chr7 (30-70)||(45976937-45976977)
chr7 (38-74)||(48716310-48716346)
[»] chr4 (42 HSPs)
chr4 (30-83)||(38869790-38869843)
chr4 (37-93)||(39509099-39509155)
chr4 (30-83)||(37109352-37109405)
chr4 (32-83)||(23377980-23378031)
chr4 (30-83)||(7949455-7949508)
chr4 (30-90)||(30938213-30938273)
chr4 (37-83)||(37274460-37274506)
chr4 (37-83)||(46329193-46329239)
chr4 (30-83)||(7292799-7292852)
chr4 (38-83)||(28635726-28635771)
chr4 (30-83)||(31759659-31759712)
chr4 (49-94)||(46295138-46295183)
chr4 (30-83)||(49576895-49576948)
chr4 (30-83)||(51250523-51250576)
chr4 (37-89)||(32992641-32992693)
chr4 (32-88)||(37720210-37720266)
chr4 (37-93)||(37980139-37980194)
chr4 (30-94)||(49262674-49262738)
chr4 (49-89)||(56440442-56440482)
chr4 (32-83)||(5450117-5450168)
chr4 (30-89)||(19238572-19238631)
chr4 (37-83)||(2622396-2622442)
chr4 (37-83)||(4249206-4249252)
chr4 (37-83)||(8030205-8030251)
chr4 (38-84)||(12821998-12822044)
chr4 (29-83)||(13265109-13265163)
chr4 (37-86)||(24991553-24991605)
chr4 (37-83)||(31826638-31826684)
chr4 (38-88)||(47044747-47044797)
chr4 (49-94)||(5795399-5795444)
chr4 (42-83)||(7539624-7539665)
chr4 (30-79)||(16581715-16581764)
chr4 (30-83)||(19680789-19680842)
chr4 (30-83)||(24234667-24234720)
chr4 (30-83)||(33619228-33619281)
chr4 (42-83)||(42815695-42815736)
chr4 (38-83)||(43623445-43623490)
chr4 (30-83)||(55427201-55427254)
chr4 (43-79)||(43728430-43728466)
chr4 (30-86)||(46545733-46545789)
chr4 (49-81)||(51622526-51622558)
chr4 (38-94)||(52254394-52254450)
[»] chr1 (50 HSPs)
chr1 (30-83)||(52336775-52336828)
chr1 (31-83)||(15786321-15786373)
chr1 (30-83)||(8177183-8177236)
chr1 (30-83)||(33700774-33700827)
chr1 (30-89)||(19528322-19528381)
chr1 (37-83)||(2799891-2799937)
chr1 (37-83)||(9117148-9117194)
chr1 (30-83)||(31383799-31383852)
chr1 (37-83)||(6122823-6122869)
chr1 (30-83)||(6650617-6650670)
chr1 (30-79)||(9165200-9165249)
chr1 (38-95)||(9964468-9964525)
chr1 (38-83)||(12587300-12587345)
chr1 (30-83)||(36371492-36371545)
chr1 (30-83)||(51703801-51703854)
chr1 (38-83)||(51814524-51814569)
chr1 (47-83)||(3265963-3265999)
chr1 (30-86)||(16893416-16893472)
chr1 (42-90)||(27223124-27223172)
chr1 (30-94)||(30689034-30689098)
chr1 (47-83)||(38947473-38947509)
chr1 (39-83)||(40810498-40810542)
chr1 (39-75)||(41508862-41508898)
chr1 (30-70)||(44046162-44046202)
chr1 (30-94)||(52116771-52116835)
chr1 (32-83)||(4566572-4566623)
chr1 (36-95)||(26232350-26232409)
chr1 (37-99)||(15581127-15581188)
chr1 (38-88)||(16169974-16170024)
chr1 (49-83)||(19940873-19940907)
chr1 (38-83)||(521248-521293)
chr1 (46-83)||(1247151-1247188)
chr1 (38-83)||(8904444-8904489)
chr1 (30-75)||(9643818-9643863)
chr1 (25-94)||(24047092-24047161)
chr1 (38-83)||(24217001-24217045)
chr1 (37-94)||(31605838-31605895)
chr1 (30-83)||(37400296-37400349)
chr1 (49-94)||(43446004-43446049)
chr1 (49-94)||(45266875-45266920)
chr1 (30-87)||(46146264-46146321)
chr1 (37-89)||(952540-952592)
chr1 (47-83)||(1600293-1600329)
chr1 (31-83)||(9879461-9879513)
chr1 (35-83)||(12370190-12370238)
chr1 (37-89)||(17297013-17297065)
chr1 (50-82)||(21392879-21392911)
chr1 (35-95)||(39966120-39966180)
chr1 (38-78)||(47753744-47753784)
chr1 (49-89)||(52029932-52029972)
[»] scaffold0291 (1 HSPs)
scaffold0291 (42-92)||(2462-2512)
[»] scaffold0299 (1 HSPs)
scaffold0299 (30-83)||(11550-11603)
[»] scaffold0194 (1 HSPs)
scaffold0194 (30-83)||(13047-13100)
[»] chr5 (24 HSPs)
chr5 (37-94)||(84853-84910)
chr5 (30-86)||(21549135-21549191)
chr5 (30-93)||(22020853-22020916)
chr5 (30-83)||(30109309-30109362)
chr5 (30-83)||(37258367-37258420)
chr5 (30-83)||(43442218-43442271)
chr5 (30-93)||(30883189-30883252)
chr5 (37-83)||(14285190-14285236)
chr5 (38-83)||(87424-87469)
chr5 (30-79)||(12883862-12883911)
chr5 (38-83)||(16773837-16773882)
chr5 (30-83)||(25627079-25627132)
chr5 (30-83)||(29075803-29075856)
chr5 (30-83)||(34984828-34984881)
chr5 (30-86)||(16436640-16436695)
chr5 (30-94)||(16457832-16457896)
chr5 (30-86)||(18595999-18596055)
chr5 (30-78)||(29692392-29692440)
chr5 (32-83)||(25979194-25979245)
chr5 (49-83)||(3584686-3584720)
chr5 (39-93)||(24895066-24895120)
chr5 (38-75)||(14495814-14495851)
chr5 (47-83)||(17028265-17028301)
chr5 (37-65)||(17761374-17761402)
[»] chr2 (35 HSPs)
chr2 (30-83)||(42327396-42327449)
chr2 (30-94)||(21213791-21213855)
chr2 (30-89)||(37480097-37480156)
chr2 (30-88)||(29503293-29503351)
chr2 (38-83)||(12994377-12994422)
chr2 (38-91)||(39715022-39715075)
chr2 (30-94)||(23052513-23052577)
chr2 (32-83)||(4262303-4262354)
chr2 (30-83)||(12086130-12086183)
chr2 (30-83)||(16918579-16918632)
chr2 (46-83)||(40416391-40416428)
chr2 (47-83)||(21195677-21195713)
chr2 (30-86)||(30410547-30410603)
chr2 (39-83)||(33582004-33582048)
chr2 (47-94)||(17737614-17737661)
chr2 (37-83)||(8192481-8192526)
chr2 (49-83)||(13803536-13803570)
chr2 (37-83)||(14500306-14500352)
chr2 (37-83)||(28194263-28194308)
chr2 (30-83)||(42922436-42922490)
chr2 (38-83)||(3001409-3001454)
chr2 (38-83)||(4438980-4439025)
chr2 (30-83)||(11251109-11251162)
chr2 (38-83)||(19244139-19244184)
chr2 (39-80)||(25637182-25637223)
chr2 (37-94)||(26482122-26482178)
chr2 (38-83)||(28846721-28846766)
chr2 (37-94)||(30359683-30359739)
chr2 (42-83)||(34041589-34041630)
chr2 (49-94)||(41908628-41908673)
chr2 (30-83)||(42602576-42602629)
chr2 (37-89)||(6099514-6099565)
chr2 (30-94)||(7799025-7799089)
chr2 (43-83)||(31573642-31573682)
chr2 (47-79)||(33839265-33839297)
[»] chr8 (35 HSPs)
chr8 (30-93)||(19703478-19703541)
chr8 (30-83)||(968384-968437)
chr8 (30-83)||(3624602-3624655)
chr8 (30-83)||(16852362-16852415)
chr8 (30-83)||(35690065-35690118)
chr8 (30-94)||(2203514-2203578)
chr8 (32-83)||(6569772-6569823)
chr8 (37-83)||(11819805-11819851)
chr8 (37-83)||(27750759-27750805)
chr8 (43-89)||(36205230-36205276)
chr8 (30-79)||(6536542-6536591)
chr8 (30-83)||(18540320-18540373)
chr8 (38-79)||(23361654-23361695)
chr8 (30-83)||(28783082-28783135)
chr8 (30-83)||(29431033-29431086)
chr8 (30-83)||(29858050-29858103)
chr8 (38-89)||(28750600-28750651)
chr8 (51-94)||(28787486-28787529)
chr8 (32-83)||(33017238-33017289)
chr8 (32-83)||(34628666-34628717)
chr8 (37-79)||(26688894-26688936)
chr8 (37-83)||(44780115-44780161)
chr8 (30-79)||(4830509-4830558)
chr8 (30-83)||(7140731-7140784)
chr8 (30-83)||(8485021-8485074)
chr8 (30-83)||(8794346-8794399)
chr8 (30-83)||(11492074-11492127)
chr8 (46-83)||(22193365-22193402)
chr8 (41-86)||(24675510-24675555)
chr8 (30-79)||(30483889-30483938)
chr8 (39-83)||(3305189-3305233)
chr8 (37-89)||(3524396-3524448)
chr8 (30-82)||(12988450-12988502)
chr8 (30-86)||(30774734-30774790)
chr8 (51-83)||(33727874-33727906)
[»] chr6 (21 HSPs)
chr6 (30-93)||(10338165-10338228)
chr6 (38-83)||(6385892-6385937)
chr6 (30-83)||(33549126-33549179)
chr6 (38-81)||(23910114-23910157)
chr6 (37-83)||(20213070-20213116)
chr6 (37-83)||(22107093-22107139)
chr6 (49-86)||(4105092-4105129)
chr6 (30-83)||(12188304-12188357)
chr6 (30-83)||(28363959-28364012)
chr6 (30-83)||(30127422-30127475)
chr6 (31-83)||(14278112-14278164)
chr6 (30-78)||(31622997-31623045)
chr6 (38-93)||(11423596-11423651)
chr6 (30-88)||(14446217-14446275)
chr6 (31-84)||(8639129-8639182)
chr6 (38-83)||(24641191-24641236)
chr6 (31-83)||(11103436-11103488)
chr6 (47-83)||(14199948-14199984)
chr6 (39-83)||(17149586-17149629)
chr6 (30-94)||(21418492-21418556)
chr6 (31-83)||(34786455-34786507)
[»] scaffold0258 (1 HSPs)
scaffold0258 (30-83)||(15324-15377)
[»] scaffold0009 (1 HSPs)
scaffold0009 (30-83)||(19848-19901)
[»] scaffold1367 (1 HSPs)
scaffold1367 (30-83)||(841-894)
[»] scaffold0180 (1 HSPs)
scaffold0180 (30-83)||(19963-20016)
[»] scaffold0002 (1 HSPs)
scaffold0002 (30-79)||(94976-95025)
[»] scaffold0300 (1 HSPs)
scaffold0300 (37-83)||(4369-4415)
[»] scaffold0517 (1 HSPs)
scaffold0517 (30-83)||(7727-7780)
[»] scaffold0126 (1 HSPs)
scaffold0126 (30-83)||(25348-25401)
[»] scaffold0101 (1 HSPs)
scaffold0101 (30-83)||(43333-43386)
[»] scaffold0044 (1 HSPs)
scaffold0044 (38-83)||(92977-93022)
[»] scaffold0021 (1 HSPs)
scaffold0021 (30-86)||(156987-157041)
[»] scaffold0004 (1 HSPs)
scaffold0004 (39-88)||(81560-81609)
[»] scaffold0122 (1 HSPs)
scaffold0122 (30-82)||(6921-6973)
[»] scaffold0032 (1 HSPs)
scaffold0032 (31-83)||(112305-112357)


Alignment Details
Target: chr3 (Bit Score: 343; Significance: 0; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 1 - 437
Target Start/End: Complemental strand, 47279487 - 47279052
Alignment:
Q  1 aacaaactagataattatatactcctcaaggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgctgattc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||    
T  47279487 aacaaactagataattatatactcctcaaggtatttgcttgggatctgggagtgtgctcctccttaaggtctcatgttcgattttccccaatgctaattc 47279388  T
Q  101 nnnnnnngataattatatacgccttttgatcattatcataaacaaaaaacaaattttttattcattgaataactaatttaatctaaattatagactattt 200  Q
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47279387 aaaaaaa-ataattatatacgccttttgatcattatcataaacaaaaaacaaattttttattcattgaataactaatttaatctaaattatagactattt 47279289  T
Q  201 acatcaatatagttatagacctgtttgtttcaatcgcatatgccaaacacaatattaacgaccttccttccttnnnnnnntaatattaacgaccttcctt 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||    
T  47279288 acatcaatatagttatagacctgtttgtttcaatcgcatatgccaaacacaatattaacgaccttccttccttaaaaaaaaaatattaacgaccttcctt 47279189  T
Q  301 tcnnnnnnnngaccttgattgtcacatatcaatgtcgtattcttttctttgcacctcgaactcctccaccagtgagatccaactcgataatgcacttttc 400  Q
    ||        |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47279188 tcaaaaaaaagaccttgattatcacatatcaatgtcgtattcttttctttgcacctcgaactcctccaccagtgagatccaactcgataatgcacttttc 47279089  T
Q  401 tttcatatgtatcgttaccatgttagtgcttaccttt 437  Q
    |||||||||||||||||||||||||||||||||||||    
T  47279088 tttcatatgtatcgttaccatgttagtgcttaccttt 47279052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 30311335 - 30311381
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  30311335 gcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgatt 30311381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 44743902 - 44743845
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||| || |||||||    
T  44743902 gcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattatctccagtgc 44743845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 11612329 - 11612373
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgat 82  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  11612329 cttgggagctgggagtgtgctcctccttaaggtctcaggttcgat 11612373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 14339632 - 14339696
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    |||||| ||||||||| |||||||||||||||||| || ||||||||||||||| |||| |||||    
T  14339632 ggtattggcttgggatttgggagtgtgctcctcctcaatgtctcaggttcgattctccctagtgc 14339696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 20501727 - 20501782
Alignment:
Q  39 ttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    |||||| ||| |||||||||||||||||||||||||||||||||| || |||||||    
T  20501727 ttgggacctgagagtgtgctcctccttaaggtctcaggttcgattctctccagtgc 20501782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 28703456 - 28703405
Alignment:
Q  32 tatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||| |||||||||||||||||||||||||| | ||||||||||||||||||    
T  28703456 tattagcttgggatctgggagtgtgctcctcttcaaggtctcaggttcgatt 28703405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 40063642 - 40063705
Alignment:
Q  31 gtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    ||||| |||||||||||| |||| |||||||||||||||||||| |||||||| || |||||||    
T  40063642 gtattggcttgggatctgagagtatgctcctccttaaggtctcaagttcgattctctccagtgc 40063705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 15048108 - 15048062
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||    
T  15048108 gcttgggatctgggaatgtgctcctcctcaaggtctcaggttcgatt 15048062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 41 - 83
Target Start/End: Complemental strand, 52770026 - 52769984
Alignment:
Q  41 gggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  52770026 gggatctgggagtgtgctcctccttgaggtctcaggttcgatt 52769984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 2667884 - 2667937
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||||||||    
T  2667884 ggtattggcttgggatctgggagtgtgctcttcctcgaggtctcaggttcgatt 2667937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 4222163 - 4222216
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||||||||||||||||||||||| || |||| ||||||||||    
T  4222163 ggtattggcttgggatctgggagtgtgctcctcctcaaagtcttaggttcgatt 4222216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 10499163 - 10499110
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| ||||||||||||||||| ||||| ||||| |||||||||||||||||    
T  10499163 ggtattggcttgggatctgggagtctgctcttccttgaggtctcaggttcgatt 10499110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 39253727 - 39253772
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||    
T  39253727 cttgggatctgggagtgtgctcctcttcaaggtctcaggttcgatt 39253772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 46518650 - 46518703
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||||||||||||||||||||||| ||||| ||||||| ||||    
T  46518650 ggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggtttgatt 46518703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 51903932 - 51903879
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| ||||||||||||||||||||||||||||   ||||||||||||||||    
T  51903932 ggtattggcttgggatctgggagtgtgctcctcctcgtggtctcaggttcgatt 51903879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 12761542 - 12761598
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    ||||||| ||||||||||| |||||||| || |||||||||||||||||||| ||||    
T  12761542 cttgggacctgggagtgtgttcctccttgagctctcaggttcgattttccccggtgc 12761598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 37051339 - 37051295
Alignment:
Q  39 ttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||||||||||||| |||||||||| |||||||||||||||    
T  37051339 ttgggatctgggagtgtgttcctccttaaagtctcaggttcgatt 37051295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 47454671 - 47454611
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttcccca 90  Q
    |||||| ||||| ||||| ||||||||||||||||  ||||||||||||||||| ||||||    
T  47454671 ggtattggcttgagatcttggagtgtgctcctcctcgaggtctcaggttcgattctcccca 47454611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 10445186 - 10445140
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||| |||||||||||||||||||  |||||||||||||||||    
T  10445186 gcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgatt 10445140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 4844557 - 4844512
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||||||||||||||||||||||  |||||||||| ||||||    
T  4844557 cttgggatctgggagtgtgctcctcctcgaggtctcaggatcgatt 4844512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 4870253 - 4870208
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||||||||||||||||||||||  |||||||||| ||||||    
T  4870253 cttgggatctgggagtgtgctcctcctcgaggtctcaggatcgatt 4870208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 7975447 - 7975488
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggtt 78  Q
    |||||||||||||||||||||||||||| ||||||| |||||    
T  7975447 gcttgggatctgggagtgtgctcctcctcaaggtcttaggtt 7975488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 32651492 - 32651439
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||| ||||||||||||||||||| ||| |||||| |||||||    
T  32651492 ggtattggcttgggacctgggagtgtgctcctcctcaagatctcagattcgatt 32651439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 36720403 - 36720456
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| ||||||||| ||||||||||||||||||  |||| ||||||||||||    
T  36720403 ggtattggcttgggatatgggagtgtgctcctcctcgaggtttcaggttcgatt 36720456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 5499453 - 5499397
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    |||| |||||| ||||||||||||||||||||||| |||||| ||| ||||| ||||    
T  5499453 cttgagatctgagagtgtgctcctccttaaggtctaaggttctattctccccggtgc 5499397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 31520652 - 31520596
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtg 93  Q
    ||||||||||||||||||||||||||||  |||||| ||||| |||| || ||||||    
T  31520652 gcttgggatctgggagtgtgctcctcctcgaggtcttaggtttgattctctccagtg 31520596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 81
Target Start/End: Complemental strand, 2597274 - 2597223
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcga 81  Q
    |||||| |||| |||| | ||||||||||||||||| |||||||||||||||    
T  2597274 ggtattggcttcggatttaggagtgtgctcctccttgaggtctcaggttcga 2597223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 83
Target Start/End: Complemental strand, 3427593 - 3427554
Alignment:
Q  44 atctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  3427593 atctgggagtgtgctcctcctcaaggtctcagattcgatt 3427554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 9557343 - 9557394
Alignment:
Q  31 gtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgat 82  Q
    ||||| |||||||||||| |||||||||||||||  || |||||||||||||    
T  9557343 gtattggcttgggatctgagagtgtgctcctcctcgagatctcaggttcgat 9557394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 8075174 - 8075128
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||  |||||||||||||||||| ||||| ||||||||||||    
T  8075174 gcttgggacttgggagtgtgctcctcctcaaggtttcaggttcgatt 8075128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 83
Target Start/End: Original strand, 14186688 - 14186722
Alignment:
Q  49 ggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||||||||||| ||||||||||||||||||    
T  14186688 ggagtgtgctcctcctcaaggtctcaggttcgatt 14186722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 83
Target Start/End: Complemental strand, 37788500 - 37788466
Alignment:
Q  49 ggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||||||||||| ||||||||||||||||||    
T  37788500 ggagtgtgctcctcctcaaggtctcaggttcgatt 37788466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 44069787 - 44069833
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||| ||||| |||||||||||||||| ||||||||||||| ||||    
T  44069787 gcttgagatcttggagtgtgctcctcctcaaggtctcaggtttgatt 44069833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 54990731 - 54990777
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||| || |||| ||||||||||| ||||||||||||||||||    
T  54990731 gcttgggaccttggagcgtgctcctcctcaaggtctcaggttcgatt 54990777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 84
Target Start/End: Original strand, 8170711 - 8170748
Alignment:
Q  47 tgggagtgtgctcctccttaaggtctcaggttcgattt 84  Q
    ||||||||||||||| || |||||||||||||||||||    
T  8170711 tgggagtgtgctcctactcaaggtctcaggttcgattt 8170748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 10828771 - 10828734
Alignment:
Q  46 ctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  10828771 ctgggagtatgctcctacttaaggtctcaggttcgatt 10828734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 11642255 - 11642210
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||||| || |||| ||||||| ||||||||||||||||||    
T  11642255 cttgggatctgagattgtgatcctcctcaaggtctcaggttcgatt 11642210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 13808931 - 13808890
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttc 79  Q
    |||||||||||| ||||||||||||||  |||||||||||||    
T  13808931 cttgggatctggcagtgtgctcctcctctaggtctcaggttc 13808890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 16354946 - 16354893
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||| | ||| ||||||||||||||| | ||||||||||||||||    
T  16354946 ggtattggcttggaacctgtgagtgtgctcctcctcagggtctcaggttcgatt 16354893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 17108935 - 17108894
Alignment:
Q  47 tgggagtgtgctcctccttaaggtctcaggttcgattttccc 88  Q
    |||||||||||||||||| ||||||||||||| |||| ||||    
T  17108935 tgggagtgtgctcctcctcaaggtctcaggtttgattctccc 17108894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 17554793 - 17554842
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttc 79  Q
    |||||| |||||||| |||||||||||||| |||| |||| |||||||||    
T  17554793 ggtattggcttgggacctgggagtgtgctcttcctcaagggctcaggttc 17554842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 83
Target Start/End: Original strand, 17765165 - 17765202
Alignment:
Q  46 ctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  17765165 ctgggagtgtgctcctcctcaagatctcaggttcgatt 17765202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 83
Target Start/End: Original strand, 19066485 - 19066522
Alignment:
Q  46 ctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  19066485 ctgggagtgtgctcctcctcaagatctcaggttcgatt 19066522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 83
Target Start/End: Original strand, 19154673 - 19154706
Alignment:
Q  50 gagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||||||||| ||||||||||||||||||    
T  19154673 gagtgtgctcctcctaaaggtctcaggttcgatt 19154706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 21960573 - 21960626
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||| ||| |||||||||||||||  ||||||||| |||||||    
T  21960573 ggtattggcttgggacctgagagtgtgctcctcctcgaggtctcagattcgatt 21960626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 27093415 - 27093362
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||| |  |||||||||||||||||| ||||||||||||| ||||    
T  27093415 ggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggtttgatt 27093362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 79
Target Start/End: Original strand, 53412983 - 53413016
Alignment:
Q  46 ctgggagtgtgctcctccttaaggtctcaggttc 79  Q
    ||||||||||||||||||| ||||||||||||||    
T  53412983 ctgggagtgtgctcctcctcaaggtctcaggttc 53413016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 79
Target Start/End: Complemental strand, 16213009 - 16212977
Alignment:
Q  47 tgggagtgtgctcctccttaaggtctcaggttc 79  Q
    |||||||||||||||||||||||||||| ||||    
T  16213009 tgggagtgtgctcctccttaaggtctcaagttc 16212977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 16900728 - 16900676
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttcccc 89  Q
    |||||||| || |||||||||||||| | ||||||||| |||||||| |||||    
T  16900728 gcttgggaccttggagtgtgctcctcgtcaaggtctcatgttcgattctcccc 16900676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 89
Target Start/End: Original strand, 19716238 - 19716278
Alignment:
Q  49 ggagtgtgctcctccttaaggtctcaggttcgattttcccc 89  Q
    |||||||||||||||| |||||||| ||||||||| |||||    
T  19716238 ggagtgtgctcctcctcaaggtctctggttcgattctcccc 19716278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 64
Target Start/End: Complemental strand, 31789022 - 31788990
Alignment:
Q  32 tatttgcttgggatctgggagtgtgctcctcct 64  Q
    |||| ||||||||||||||||||||||||||||    
T  31789022 tattggcttgggatctgggagtgtgctcctcct 31788990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 83
Target Start/End: Original strand, 33899653 - 33899689
Alignment:
Q  47 tgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||||||||||||  |||||||||||||||||    
T  33899653 tgggagtgtgctcctcctctaggtctcaggttcgatt 33899689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 35111218 - 35111266
Alignment:
Q  46 ctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    |||||||||||||| ||||  |||||||| ||||||||||||| |||||    
T  35111218 ctgggagtgtgctcatcctcgaggtctcatgttcgattttccctagtgc 35111266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 40268518 - 40268569
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttcccc 89  Q
    |||||||| || |||||| ||||||| |||||||||||||||||||| |||||    
T  40268518 gcttgggaccttggagtgggctcctc-ttaaggtctcaggttcgattctcccc 40268569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 47237025 - 47236961
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    |||||| | |||||| | ||||||||||||||| | ||||||||| |||||||| ||||| ||||    
T  47237025 ggtattggtttgggacccgggagtgtgctcctcttcaaggtctcatgttcgattctccccggtgc 47236961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 79
Target Start/End: Original strand, 49452912 - 49452944
Alignment:
Q  47 tgggagtgtgctcctccttaaggtctcaggttc 79  Q
    |||||||||||||||||| ||||||||||||||    
T  49452912 tgggagtgtgctcctcctcaaggtctcaggttc 49452944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 48771960 - 48772018
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccc 88  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  48771960 ggtattggcttgggatctgggagtgtgctcctccttgaggtctcaggttcgattatccc 48772018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 26459464 - 26459411
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||||||    
T  26459464 ggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgatt 26459411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 11721014 - 11720950
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    |||||| |||||||| |||||| |||||||||||||||||| |||| ||||||| ||||||||||    
T  11721014 ggtattggcttgggacctgggaatgtgctcctccttaaggtatcagattcgattctccccagtgc 11720950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 22760893 - 22760944
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttcccc 89  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||| |||||    
T  22760893 cttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctcccc 22760944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 49050544 - 49050481
Alignment:
Q  31 gtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    ||||| |||||||||||| |||||| ||||||||| ||||||||||||||||| ||||| ||||    
T  49050544 gtattagcttgggatctgcgagtgtactcctccttgaggtctcaggttcgattctccccggtgc 49050481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 15905727 - 15905670
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccc 88  Q
    |||||| |||||||| |||||||||||||||||||| ||||||||||||||||| ||||    
T  15905727 ggtattggcttgggacctgggagtgtgctcctcctt-aggtctcaggttcgattctccc 15905670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 17041059 - 17041013
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||    
T  17041059 gcttgggatctggaagtgtgctcctcctcaaggtctcaggttcgatt 17041013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 37233624 - 37233575
Alignment:
Q  32 tatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcga 81  Q
    |||| ||||||||| |||||||||||||||||||||||||||||| ||||    
T  37233624 tattggcttgggatgtgggagtgtgctcctccttaaggtctcagggtcga 37233575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 43215206 - 43215259
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||| || |||||||||||||||| ||||||||||||||||||    
T  43215206 ggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgatt 43215259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 45709762 - 45709709
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||||||| |||||||||||||||  |||||||||||||||||    
T  45709762 ggtattagcttgggatctgagagtgtgctcctcctcgaggtctcaggttcgatt 45709709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 25590633 - 25590689
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttc 86  Q
    |||||| ||||| ||||||||||||||||||||||  ||||||| ||||||||||||    
T  25590633 ggtattggcttgagatctgggagtgtgctcctcctcgaggtctcgggttcgattttc 25590689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 43590929 - 43590993
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    |||||| ||||||||  |||||||||||||||||| || ||||||||||||||| |||| |||||    
T  43590929 ggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcgattctccctagtgc 43590993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 5934150 - 5934196
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||||||||||||||||||||||| |||| ||| ||||||||    
T  5934150 gcttgggatctgggagtgtgctcctccttgaggtttcatgttcgatt 5934196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 9608676 - 9608630
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||||    
T  9608676 gcttgggatctgggagtgtcctcctcctcaagatctcaggttcgatt 9608630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 9836248 - 9836202
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||||    
T  9836248 gcttgggatctgggagtgtcctcctcctcaagatctcaggttcgatt 9836202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 95
Target Start/End: Complemental strand, 18056810 - 18056764
Alignment:
Q  49 ggagtgtgctcctccttaaggtctcaggttcgattttccccagtgct 95  Q
    |||||||||||||||| |||||||||||||||||| ||||| |||||    
T  18056810 ggagtgtgctcctcctgaaggtctcaggttcgattctccccggtgct 18056764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 20335886 - 20335832
Alignment:
Q  29 aggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||| ||||||||  ||||||||||||||||||  |||||||||||||||||    
T  20335886 aggtattggcttgggacttgggagtgtgctcctcctcgaggtctcaggttcgatt 20335832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 29785348 - 29785302
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||||||    
T  29785348 gcttgggatctggaagtgtgctcctcctcaaggtctcatgttcgatt 29785302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 29916852 - 29916802
Alignment:
Q  40 tgggatctgggagtgtgctcctccttaaggtctcaggttcgattttcccca 90  Q
    ||||||||  ||||||||||||||| |||||||||||||||||| ||||||    
T  29916852 tgggatctaagagtgtgctcctcctcaaggtctcaggttcgattctcccca 29916802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 8108611 - 8108656
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||| |||||||| |||||||||| |||||||||||||||||    
T  8108611 cttgggatatgggagtgcgctcctccttgaggtctcaggttcgatt 8108656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 21877838 - 21877883
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||| ||||||| ||||||||||||||||||||| ||||||||    
T  21877838 cttgggacctgggagggtgctcctccttaaggtctcacgttcgatt 21877883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 23552148 - 23552193
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  23552148 cttgggacctgggagtgtgctcctcctcaaggtctcaagttcgatt 23552193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 37473645 - 37473694
Alignment:
Q  39 ttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccc 88  Q
    ||||||||| ||||| ||||||||||| ||||||||||||||||| ||||    
T  37473645 ttgggatctaggagtttgctcctccttgaggtctcaggttcgattctccc 37473694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 39631866 - 39631919
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||| ||||||||  ||||||||| ||||||||||||||||||    
T  39631866 ggtattggcttgggacctgggagtaagctcctcctcaaggtctcaggttcgatt 39631919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 24513819 - 24513875
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttc 86  Q
    |||||| ||||| ||| ||||||||| || |||||| ||||||||||||||||||||    
T  24513819 ggtattggcttgagatttgggagtgtacttctccttgaggtctcaggttcgattttc 24513875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 30579357 - 30579413
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttc 86  Q
    |||||| ||||| || |||||||||| | |||||| |||||||||||||||||||||    
T  30579357 ggtattggcttgagacctgggagtgtccacctcctcaaggtctcaggttcgattttc 30579413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 37085603 - 37085543
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttcccca 90  Q
    |||||| ||||||||| ||||||||||||| ||||  |||| |||||||||||| ||||||    
T  37085603 ggtattggcttgggatttgggagtgtgctcatcctcgaggtttcaggttcgattctcccca 37085543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 280005 - 279959
Alignment:
Q  32 tatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttc 79  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||||||    
T  280005 tattggcttgggat-tgggagtgtactcctccttaaggtctcaggttc 279959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 81
Target Start/End: Original strand, 7801210 - 7801253
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcga 81  Q
    ||||||| ||||||||||||||||| | ||||||||||||||||    
T  7801210 cttgggacctgggagtgtgctcctcttcaaggtctcaggttcga 7801253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 83
Target Start/End: Complemental strand, 9183231 - 9183192
Alignment:
Q  44 atctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||||||||||||||| || |||||||||||||||    
T  9183231 atctgggagtgtgctcctcctcaaagtctcaggttcgatt 9183192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 88
Target Start/End: Complemental strand, 25132413 - 25132374
Alignment:
Q  49 ggagtgtgctcctccttaaggtctcaggttcgattttccc 88  Q
    ||||||||||||| ||||||||||||||||||||| ||||    
T  25132413 ggagtgtgctccttcttaaggtctcaggttcgattctccc 25132374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 26703149 - 26703196
Alignment:
Q  32 tatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttc 79  Q
    |||| ||||||||||||||||||||||||| ||  |||||||||||||    
T  26703149 tattggcttgggatctgggagtgtgctccttctcgaggtctcaggttc 26703196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 88
Target Start/End: Original strand, 31835233 - 31835272
Alignment:
Q  49 ggagtgtgctcctccttaaggtctcaggttcgattttccc 88  Q
    |||||||||||||||| |||||||||||||||||| ||||    
T  31835233 ggagtgtgctcctcctcaaggtctcaggttcgattatccc 31835272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 42711980 - 42712043
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtg 93  Q
    |||||| |||||| |  |||||||||||||||||| ||||||||| |||||||| |||| ||||    
T  42711980 ggtattagcttggtacatgggagtgtgctcctcctcaaggtctcatgttcgattctccctagtg 42712043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 18363725 - 18363771
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||| ||| |||||||||||||||||| ||||||||||||| ||||    
T  18363725 gcttgagatttgggagtgtgctcctcctcaaggtctcaggtttgatt 18363771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 21854570 - 21854616
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcagg 76  Q
    |||||| ||| |||||||||||||||||||||||| || ||||||||    
T  21854570 ggtattggctagggatctgggagtgtgctcctcctcaaagtctcagg 21854616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 80
Target Start/End: Complemental strand, 41519310 - 41519268
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcg 80  Q
    |||||||| | |||||||||||||||| |||||||||||||||    
T  41519310 cttgggatttaggagtgtgctcctcctcaaggtctcaggttcg 41519268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 3174957 - 3175002
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||||||||||||||||||  ||  |||||||||||||||||    
T  3174957 cttgggatctgggagtgtgctccatctcgaggtctcaggttcgatt 3175002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 5579281 - 5579240
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggtt 78  Q
    |||||||| || |||||||||||||||| |||||||||||||    
T  5579281 gcttgggaccttggagtgtgctcctcctcaaggtctcaggtt 5579240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 15137583 - 15137628
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||| | |||||||||||||||| ||||||||||||| ||||    
T  15137583 cttgggatttaggagtgtgctcctcctcaaggtctcaggttagatt 15137628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 25655274 - 25655229
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||||| ||||||| ||||||| ||||| ||||||||||||    
T  25655274 cttgggatctgtgagtgtgatcctcctcaaggtttcaggttcgatt 25655229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 33222392 - 33222445
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||| |||| ||||| ||| |||| ||||||||||||||||||    
T  33222392 ggtattggcttgggacctggaagtgtactcatcctcaaggtctcaggttcgatt 33222445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 38374646 - 38374589
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    |||||||| ||  ||||||||||||||| ||||||| |||||||||| ||||| ||||    
T  38374646 gcttgggaccttagagtgtgctcctcctcaaggtcttaggttcgattctccccggtgc 38374589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 39499773 - 39499720
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||| ||| ||||||| ||||| ||||||||||| ||||||||    
T  39499773 ggtattggcttgggacctgtgagtgtgttcctctttaaggtctcatgttcgatt 39499720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 42262141 - 42262104
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcag 75  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  42262141 cttgggatctgagagtgtgctcctcctaaaggtctcag 42262104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 48125221 - 48125165
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    |||||||| || |||||||||||||||  |||||||||||||| ||||||||| ||||    
T  48125221 gcttgggaccttggagtgtgctcctccg-aaggtctcaggttcaattttccccggtgc 48125165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 13106826 - 13106783
Alignment:
Q  39 ttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||||| ||||| |||||||| ||||||||||||||||||    
T  13106826 ttgggatctgg-agtgtactcctcctcaaggtctcaggttcgatt 13106783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 25021389 - 25021345
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctca 74  Q
    |||||| |||||||| ||||||||||||||||||| || ||||||    
T  25021389 ggtattggcttgggacctgggagtgtgctcctcctcaaagtctca 25021345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 65
Target Start/End: Complemental strand, 34898510 - 34898482
Alignment:
Q  37 gcttgggatctgggagtgtgctcctcctt 65  Q
    |||||||||||||||||||||||||||||    
T  34898510 gcttgggatctgggagtgtgctcctcctt 34898482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 37693735 - 37693692
Alignment:
Q  39 ttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||| ||||||||||||| ||||| |||||||||||||||    
T  37693735 ttgggatcttggagtgtgctcct-cttaatgtctcaggttcgatt 37693692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 70
Target Start/End: Complemental strand, 45976977 - 45976937
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggt 70  Q
    |||||| ||||| || |||||||||||||||||||||||||    
T  45976977 ggtattggcttgtgacctgggagtgtgctcctccttaaggt 45976937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 48716310 - 48716346
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctca 74  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  48716310 cttggaatctgggagtgtgttcctccttaaggtctca 48716346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 5e-17; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 38869790 - 38869843
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  38869790 ggtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgatt 38869843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 39509099 - 39509155
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtg 93  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||    
T  39509099 gcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctccccagtg 39509155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 37109405 - 37109352
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||||||    
T  37109405 ggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgatt 37109352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 23377980 - 23378031
Alignment:
Q  32 tatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||| |||||||| ||||||||||||||||||| ||||||||||||||||||    
T  23377980 tattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgatt 23378031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 7949508 - 7949455
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||| || |||||||||||||||| ||||||||||||||||||    
T  7949508 ggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgatt 7949455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 30938273 - 30938213
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttcccca 90  Q
    |||||| | ||||||||| ||||||||||||||||  ||||||||||||||||| ||||||    
T  30938273 ggtattggtttgggatcttggagtgtgctcctcctcgaggtctcaggttcgattctcccca 30938213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 37274506 - 37274460
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||| ||||||||||||||||||| ||||||| ||||||||||    
T  37274506 gcttgggacctgggagtgtgctcctcctcaaggtcttaggttcgatt 37274460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 46329193 - 46329239
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||| ||||||||||||||||||| ||||| ||||||||||||    
T  46329193 gcttgggacctgggagtgtgctcctcctcaaggtatcaggttcgatt 46329239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 7292852 - 7292799
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||| | ||||||||||||||||||| || |||||||||||||||    
T  7292852 ggtattggcttggaacctgggagtgtgctcctcctcaaagtctcaggttcgatt 7292799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 28635726 - 28635771
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||||||||||||||||||||||  |||||| ||||||||||    
T  28635726 cttgggatctgggagtgtgctcctcctggaggtcttaggttcgatt 28635771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 31759712 - 31759659
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| ||||||||  |||||||||||||||||| |||||||||| |||||||    
T  31759712 ggtattggcttgggacttgggagtgtgctcctcctcaaggtctcagattcgatt 31759659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 46295138 - 46295183
Alignment:
Q  49 ggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    |||||||||||||||| |||||||||||||||||| ||||| ||||    
T  46295138 ggagtgtgctcctcctcaaggtctcaggttcgattctccccggtgc 46295183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 49576948 - 49576895
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||| |||  |||||||||||||||||| ||||||||||||||||||    
T  49576948 ggtattggctttggacttgggagtgtgctcctcctcaaggtctcaggttcgatt 49576895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 51250576 - 51250523
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||||||||||||||||||| ||| ||| ||||| ||||||||    
T  51250576 ggtattggcttgggatctgggagtgtgctccgcctcaagatctcaagttcgatt 51250523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 32992641 - 32992693
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttcccc 89  Q
    |||||||| || |||||||||||||||| ||||||||| |||||||| |||||    
T  32992641 gcttgggaccttggagtgtgctcctcctcaaggtctcaagttcgattctcccc 32992693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 37720266 - 37720210
Alignment:
Q  32 tatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccc 88  Q
    |||| |||||||| |||||||||||| |||||| |||||| ||||||||||| ||||    
T  37720266 tattggcttgggacctgggagtgtgcccctcctcaaggtcccaggttcgattctccc 37720210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 37980194 - 37980139
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtg 93  Q
    |||||||| || |||||||||||||| | |||||||||||||||||| |||||||||    
T  37980194 gcttgggaccttggagtgtgctcctc-tcaaggtctcaggttcgattctccccagtg 37980139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 49262738 - 49262674
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    |||||| ||||||||  || ||||||||||||  || ||||||||||||||||| ||||||||||    
T  49262738 ggtattcgcttgggacttgagagtgtgctccttgttgaggtctcaggttcgattctccccagtgc 49262674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 89
Target Start/End: Original strand, 56440442 - 56440482
Alignment:
Q  49 ggagtgtgctcctccttaaggtctcaggttcgattttcccc 89  Q
    ||||||||||||||||||||||||| ||||||||| |||||    
T  56440442 ggagtgtgctcctccttaaggtctccggttcgattctcccc 56440482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 5450117 - 5450168
Alignment:
Q  32 tatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||| |||||| ||||||||||||||||||||| ||||| |||| |||||||    
T  5450117 tattggcttggaatctgggagtgtgctcctcctcaaggtttcagattcgatt 5450168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 19238631 - 19238572
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttcccc 89  Q
    |||||| ||||||||  ||||||||||||||||||  ||||||| ||||||||| |||||    
T  19238631 ggtattggcttgggacttgggagtgtgctcctcctcgaggtctcgggttcgattctcccc 19238572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 2622442 - 2622396
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||| |||||||||||||||||||  | |||||||||||||||    
T  2622442 gcttgggacctgggagtgtgctcctcctccatgtctcaggttcgatt 2622396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 4249206 - 4249252
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||| | |||||||||||||||| ||||||||||||| ||||    
T  4249206 gcttgggattttggagtgtgctcctcctcaaggtctcaggtttgatt 4249252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 8030251 - 8030205
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||  |||||||||||||||||| ||||||||| ||||||||    
T  8030251 gcttgggacttgggagtgtgctcctcctcaaggtctcaagttcgatt 8030205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 12821998 - 12822044
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgattt 84  Q
    ||||||||||||||||||||||||  | |||||||||| ||||||||    
T  12821998 cttgggatctgggagtgtgctcctgttcaaggtctcagattcgattt 12822044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 13265163 - 13265109
Alignment:
Q  29 aggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||| |||||||| |||||| |||||||||||||| ||| |||| |||||||    
T  13265163 aggtattggcttgggacctgggaatgtgctcctccttatggtttcagattcgatt 13265109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 24991553 - 24991605
Alignment:
Q  37 gcttgggatctgggagtgtg---ctcctccttaaggtctcaggttcgattttc 86  Q
    ||||| ||||||||||||||   |||||||| |||||||||||||||||||||    
T  24991553 gcttgagatctgggagtgtgttgctcctcctcaaggtctcaggttcgattttc 24991605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 31826638 - 31826684
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||| || ||||||||||||||| ||||||||| ||||||||    
T  31826638 gcttgggatttgcgagtgtgctcctcctcaaggtctcaagttcgatt 31826684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 47044747 - 47044797
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccc 88  Q
    ||||||||||| |||| ||||||||||  ||||||||||||||||| ||||    
T  47044747 cttgggatctgagagtttgctcctcctcgaggtctcaggttcgattctccc 47044797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 94
Target Start/End: Complemental strand, 5795444 - 5795399
Alignment:
Q  49 ggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    ||||| |||||||||| ||||||||||||| |||| ||||||||||    
T  5795444 ggagtatgctcctcctcaaggtctcaggtttgattctccccagtgc 5795399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 83
Target Start/End: Original strand, 7539624 - 7539665
Alignment:
Q  42 ggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||||||| ||||||| || ||||||||||||||||||    
T  7539624 ggatctgggagtatgctccttctcaaggtctcaggttcgatt 7539665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 16581715 - 16581764
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttc 79  Q
    |||||| |||||| | |||||||| |||||||||| ||||||||||||||    
T  16581715 ggtattggcttggaacctgggagtctgctcctcctcaaggtctcaggttc 16581764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 19680842 - 19680789
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| ||||||||  ||||||||||||| |||| ||||||| ||||||||||    
T  19680842 ggtattcgcttgggacttgggagtgtgctcttcctcaaggtcttaggttcgatt 19680789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 24234667 - 24234720
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| ||||||||  ||||||||||||| |||| ||||||||| ||||||||    
T  24234667 ggtattggcttgggacttgggagtgtgctcatcctgaaggtctcaagttcgatt 24234720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 33619228 - 33619281
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||| ||||||||||| ||| |||||||| |||||| ||||||||||    
T  33619228 ggtattggcttaggatctgggagcgtggtcctccttgaggtcttaggttcgatt 33619281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 83
Target Start/End: Complemental strand, 42815736 - 42815695
Alignment:
Q  42 ggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||||||||| || |||||||||||||| ||||||||    
T  42815736 ggatctgggagtgtgttcttccttaaggtctcatgttcgatt 42815695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 43623490 - 43623445
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||| |||| |||||||||||||||||| | |||||||||||||||    
T  43623490 cttgagatcagggagtgtgctcctccttgaagtctcaggttcgatt 43623445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 55427254 - 55427201
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||| |||||||| ||||||| ||  |||||||||||||||||    
T  55427254 ggtattggcttgggacctgggagtctgctcctgctcgaggtctcaggttcgatt 55427201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 43728430 - 43728466
Alignment:
Q  43 gatctgggagtgtgctcctccttaaggtctcaggttc 79  Q
    |||||||||||||||||||||| || |||||||||||    
T  43728430 gatctgggagtgtgctcctcctcaaagtctcaggttc 43728466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 46545733 - 46545789
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttc 86  Q
    |||||| ||||| || ||| ||||||||||||||| ||| |||||| ||||||||||    
T  46545733 ggtattggcttgagacctgagagtgtgctcctcctcaagatctcagattcgattttc 46545789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 81
Target Start/End: Original strand, 51622526 - 51622558
Alignment:
Q  49 ggagtgtgctcctccttaaggtctcaggttcga 81  Q
    |||||||||||||||| ||||||||||||||||    
T  51622526 ggagtgtgctcctcctcaaggtctcaggttcga 51622558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 52254450 - 52254394
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    |||||||| || |||||||||||||||| |||| ||||||| |||| || |||||||    
T  52254450 cttgggatatgagagtgtgctcctccttgaggtttcaggttagattctctccagtgc 52254394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 5e-17; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 52336828 - 52336775
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  52336828 ggtattggcttgggatctgggagtgtgctcctccttaagatctcaggttcgatt 52336775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 15786373 - 15786321
Alignment:
Q  31 gtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  15786373 gtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgatt 15786321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 8177236 - 8177183
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||||||||||||||||||||||| ||||| ||||||||||||    
T  8177236 ggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggttcgatt 8177183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 33700827 - 33700774
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||| ||||||||||||||||||||| ||||||||||||||||||    
T  33700827 ggtattggcttggaatctgggagtgtgctcctcctcaaggtctcaggttcgatt 33700774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 19528381 - 19528322
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttcccc 89  Q
    |||||| |||||||||||  ||||||||||||||| |||||||||||||||||| |||||    
T  19528381 ggtattggcttgggatctatgagtgtgctcctcctcaaggtctcaggttcgattctcccc 19528322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 2799891 - 2799937
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||    
T  2799891 gcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgatt 2799937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 9117148 - 9117194
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||    
T  9117148 gcttgggatctggaagtgtgctcctccttgaggtctcaggttcgatt 9117194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 31383852 - 31383799
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||| ||||||||||||||||||||  ||||||||||||||||    
T  31383852 ggtattggcttgggacctgggagtgtgctcctccttggggtctcaggttcgatt 31383799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 6122823 - 6122869
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||  |||||||||||||||||| ||||||||||||||||||    
T  6122823 gcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgatt 6122869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 6650617 - 6650670
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||||| |||||| |||||||||| || |||||||||||||||    
T  6650617 ggtattggcttgggatcggggagtatgctcctcctcaatgtctcaggttcgatt 6650670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 9165249 - 9165200
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttc 79  Q
    |||||| |||||||| ||||||||||||||||||| || |||||||||||    
T  9165249 ggtattggcttgggacctgggagtgtgctcctcctcaaagtctcaggttc 9165200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 9964468 - 9964525
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgct 95  Q
    |||||||||||||||||||||| |||| || |||||||||| |||| || ||||||||    
T  9964468 cttgggatctgggagtgtgctcttcctcaatgtctcaggtttgattatctccagtgct 9964525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 12587300 - 12587345
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||||| |||||||||||||||  |||||||||||||||||    
T  12587300 cttgggatctgtgagtgtgctcctcctcgaggtctcaggttcgatt 12587345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 36371492 - 36371545
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||| | ||||||||||||||||||| ||||||| ||||||||||    
T  36371492 ggtattggcttggaacctgggagtgtgctcctcctcaaggtctgaggttcgatt 36371545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 51703801 - 51703854
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||| ||||||||||||||||||||| || || ||||||||||||    
T  51703801 ggtattggcttggaatctgggagtgtgctcctcctcaaagtttcaggttcgatt 51703854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 51814524 - 51814569
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||| |||||| ||||||||||||||| ||||||||||||||||||    
T  51814524 cttgagatctgagagtgtgctcctcctcaaggtctcaggttcgatt 51814569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 83
Target Start/End: Original strand, 3265963 - 3265999
Alignment:
Q  47 tgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||||||||||||| ||||||||||||||||||    
T  3265963 tgggagtgtgctcctcctcaaggtctcaggttcgatt 3265999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 16893416 - 16893472
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttc 86  Q
    |||||| ||||| ||| ||||||||| ||||||||  ||||||||||||||||||||    
T  16893416 ggtattggcttgagatttgggagtgtactcctcctcgaggtctcaggttcgattttc 16893472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 27223172 - 27223124
Alignment:
Q  42 ggatctgggagtgtgctcctccttaaggtctcaggttcgattttcccca 90  Q
    |||||||||||||||||| || | |||||||||||||||||| ||||||    
T  27223172 ggatctgggagtgtgctcttcttcaaggtctcaggttcgattctcccca 27223124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 30689034 - 30689098
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    |||||| |||| ||| |||||||| ||||||||||| |||||||| |||| ||| ||||||||||    
T  30689034 ggtattggcttaggacctgggagtttgctcctccttgaggtctcatgttcaattctccccagtgc 30689098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 38947509 - 38947473
Alignment:
Q  47 tgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||||||||||||| ||||||||||||||||||    
T  38947509 tgggagtgtgctcctcctcaaggtctcaggttcgatt 38947473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 40810498 - 40810542
Alignment:
Q  39 ttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||||||||||||| ||||| | ||||||||||||||||||    
T  40810498 ttgggatctgggagtgtgttcctcttcaaggtctcaggttcgatt 40810542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 41508862 - 41508898
Alignment:
Q  39 ttgggatctgggagtgtgctcctccttaaggtctcag 75  Q
    |||||||||||||||||||||||||| ||||||||||    
T  41508862 ttgggatctgggagtgtgctcctcctcaaggtctcag 41508898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 70
Target Start/End: Complemental strand, 44046202 - 44046162
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggt 70  Q
    |||||| |||||||||||||||||||||||||||| |||||    
T  44046202 ggtattggcttgggatctgggagtgtgctcctcctcaaggt 44046162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 52116835 - 52116771
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    |||||| ||||||||  |||||||||||||||||| || ||||||||||| ||| |||| |||||    
T  52116835 ggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcaattctccctagtgc 52116771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 4566572 - 4566623
Alignment:
Q  32 tatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||| |||||| | ||||||||||||||||||| | ||||||||||||||||    
T  4566572 tattggcttggaacctgggagtgtgctcctcctcagggtctcaggttcgatt 4566623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 95
Target Start/End: Complemental strand, 26232409 - 26232350
Alignment:
Q  36 tgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgct 95  Q
    |||||| | |||| |||||||||||||||| ||||||||||||| ||| || ||||||||    
T  26232409 tgcttgaggtctgagagtgtgctcctccttgaggtctcaggttcaattctctccagtgct 26232350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 15581188 - 15581127
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgctgatt 99  Q
    |||||||| || |||||||||||||| | |||||||||||||| ||| ||||| |||||||||    
T  15581188 gcttgggaccttggagtgtgctcctc-taaaggtctcaggttcaattctccccggtgctgatt 15581127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 16170024 - 16169974
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccc 88  Q
    ||||||| ||||||||||| ||||||| ||||| |||||||||||| ||||    
T  16170024 cttgggacctgggagtgtgttcctcctcaaggtttcaggttcgattctccc 16169974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 83
Target Start/End: Complemental strand, 19940907 - 19940873
Alignment:
Q  49 ggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||||||||||||||||||||||||| ||||    
T  19940907 ggagtgtgctcctccttaaggtctcaggtttgatt 19940873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 521248 - 521293
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||| ||| |||| |||||||||||||||| |||||||||||||||    
T  521248 cttgagatttgggggtgtgctcctccttaaagtctcaggttcgatt 521293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 83
Target Start/End: Original strand, 1247151 - 1247188
Alignment:
Q  46 ctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  1247151 ctgggagtgtactcctcctcaaggtctcaggttcgatt 1247188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 8904444 - 8904489
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||| || ||||||||||||||| ||||||||| ||||||||    
T  8904444 cttgggatatgtgagtgtgctcctcctcaaggtctcaagttcgatt 8904489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 9643863 - 9643818
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcag 75  Q
    |||||| |||||||||||||||||||| || |||| ||||||||||    
T  9643863 ggtattggcttgggatctgggagtgtgttcatcctcaaggtctcag 9643818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 24047161 - 24047092
Alignment:
Q  25 ctcaaggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    |||| |||||| ||||| ||  ||||||||||||||||||  |||| ||| |||||||| ||||||||||    
T  24047161 ctcatggtattggcttgagacttgggagtgtgctcctcctcgaggtttcaagttcgattctccccagtgc 24047092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 24217001 - 24217045
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||||| ||||||||||||| || ||||||||||||||||||    
T  24217001 cttgggatcttggagtgtgctcct-ctcaaggtctcaggttcgatt 24217045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 31605895 - 31605838
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    |||||||| || | |||||||||||||| ||||||||| |||||||| ||||| ||||    
T  31605895 gcttgggaccttgaagtgtgctcctcctcaaggtctcaagttcgattctccccggtgc 31605838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 37400296 - 37400349
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| ||||| || |||  |||||||||||||||||||||||| ||||||||    
T  37400296 ggtattggcttgagacctgaaagtgtgctcctccttaaggtctcaagttcgatt 37400349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 43446004 - 43446049
Alignment:
Q  49 ggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    |||||||||||||||| ||||||||| |||||||| ||||| ||||    
T  43446004 ggagtgtgctcctcctcaaggtctcatgttcgattctccccggtgc 43446049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 45266875 - 45266920
Alignment:
Q  49 ggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    ||||| |||||||||| |||||||||||||||||| ||||| ||||    
T  45266875 ggagtttgctcctcctcaaggtctcaggttcgattctccccggtgc 45266920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 46146321 - 46146264
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttcc 87  Q
    |||||| ||||||||||||||| |||||||| | | || ||||||||||| |||||||    
T  46146321 ggtattagcttgggatctgggaatgtgctccccttcaaagtctcaggttcaattttcc 46146264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 952540 - 952592
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttcccc 89  Q
    |||||||| |||||||||||||| |||| || |||||||||| |||| |||||    
T  952540 gcttgggacctgggagtgtgctcatcctcaaagtctcaggttagattctcccc 952592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 1600329 - 1600293
Alignment:
Q  47 tgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||||||||||||||| || ||||||||||||    
T  1600329 tgggagtgtgctcctccttaaagtttcaggttcgatt 1600293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 9879461 - 9879513
Alignment:
Q  31 gtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||| |||||||||||| |||||| ||| ||||| ||||||||| |||||||    
T  9879461 gtattggcttgggatctgagagtgtactcttccttgaggtctcagattcgatt 9879513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 12370190 - 12370238
Alignment:
Q  35 ttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||||| |||||||||||||||||||  |||||||| ||| ||||    
T  12370190 ttgcttgggacctgggagtgtgctcctcctcgaggtctcatgtttgatt 12370238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 17297013 - 17297065
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttcccc 89  Q
    |||||||| || |||||||||||||||| ||||||||| ||| |||| |||||    
T  17297013 gcttgggaccttggagtgtgctcctcctcaaggtctcatgtttgattctcccc 17297065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 21392879 - 21392911
Alignment:
Q  50 gagtgtgctcctccttaaggtctcaggttcgat 82  Q
    ||||||||||||||| |||||||||||||||||    
T  21392879 gagtgtgctcctcctcaaggtctcaggttcgat 21392911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 39966120 - 39966180
Alignment:
Q  35 ttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgct 95  Q
    ||||| |||| || ||||||| |||||||| ||||||||||||||| || ||||| |||||    
T  39966120 ttgctagggaccttggagtgtactcctcctcaaggtctcaggttcgtttctccccggtgct 39966180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 47753744 - 47753784
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggtt 78  Q
    |||||||||| ||| |||||||||||| |||||||||||||    
T  47753744 cttgggatctaggactgtgctcctcctcaaggtctcaggtt 47753784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 89
Target Start/End: Complemental strand, 52029972 - 52029932
Alignment:
Q  49 ggagtgtgctcctccttaaggtctcaggttcgattttcccc 89  Q
    ||||||||||||| || |||||||||||||||||| |||||    
T  52029972 ggagtgtgctccttctcaaggtctcaggttcgattctcccc 52029932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 2512 - 2462
Alignment:
Q  42 ggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagt 92  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  2512 ggatctgggagtgtgctcctcctcaaggtctcaggttcgattctccccagt 2462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 11550 - 11603
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| ||||||||||||||||||||||||||||  |||||||||||||||||    
T  11550 ggtattggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgatt 11603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 13100 - 13047
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| ||||| |||||||||||||||||||||| ||||||||||||||||||    
T  13100 ggtattggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgatt 13047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 84853 - 84910
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||| ||||| ||||    
T  84853 gcttgggatctgggagtgtgctcctcctcaaggtctcaagttcgattctccccggtgc 84910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 21549191 - 21549135
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttc 86  Q
    |||||| |||||||| |||||||||||||||||||||| |||||| |||||||||||    
T  21549191 ggtattggcttgggacctgggagtgtgctcctccttaaagtctcaagttcgattttc 21549135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 22020916 - 22020853
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtg 93  Q
    |||||| ||||||||||||||||||||||||||||| | ||||||| ||||||| || ||||||    
T  22020916 ggtattagcttgggatctgggagtgtgctcctccttgaagtctcagattcgattctctccagtg 22020853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 30109362 - 30109309
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| ||||| || |||||||||||||||||||| |||||||||||||||||    
T  30109362 ggtattggcttgtgacctgggagtgtgctcctccttgaggtctcaggttcgatt 30109309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 37258420 - 37258367
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| ||||||||||| |||||||||||||||| ||||| ||||||||||||    
T  37258420 ggtattagcttgggatctaggagtgtgctcctcctcaaggtttcaggttcgatt 37258367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 43442218 - 43442271
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| | ||| |||||||||||||||||||||| ||||||||||||||||||    
T  43442218 ggtattggtttgagatctgggagtgtgctcctcctcaaggtctcaggttcgatt 43442271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 30883252 - 30883189
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtg 93  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||| |||| ||| || ||||||    
T  30883252 ggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaagttcaattctcaccagtg 30883189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 14285190 - 14285236
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| | ||||||||||||||||||| ||||||||||||||||||    
T  14285190 gcttggaacctgggagtgtgctcctcctcaaggtctcaggttcgatt 14285236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 87469 - 87424
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||| ||||||||||||||||||||| ||||||||||||| ||||    
T  87469 cttggaatctgggagtgtgctcctcctcaaggtctcaggtttgatt 87424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 12883862 - 12883911
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttc 79  Q
    |||||| | ||||||||||||||||||||||||||| |||||||| ||||    
T  12883862 ggtattaggttgggatctgggagtgtgctcctccttgaggtctcatgttc 12883911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 16773837 - 16773882
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||| |||||||||||||||||||  |||||||||||||||||    
T  16773837 cttgggacctgggagtgtgctcctcctcgaggtctcaggttcgatt 16773882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 25627079 - 25627132
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||| |  |||||||||||||||||| ||||||||||||||||||    
T  25627079 ggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgatt 25627132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 29075803 - 29075856
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| ||||||||||||||||||||||||||||  || ||||| ||||||||    
T  29075803 ggtattggcttgggatctgggagtgtgctcctcctcgagatctcatgttcgatt 29075856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 34984828 - 34984881
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||| | ||||||||||||||||||| ||||||| ||||||||||    
T  34984828 ggtattggcttggaacctgggagtgtgctcctcctcaaggtcttaggttcgatt 34984881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 16436640 - 16436695
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttc 86  Q
    |||||| |||||||| || |||||||||||||||| ||||||||| |||||||||||    
T  16436640 ggtattggcttggga-cttggagtgtgctcctcctcaaggtctcatgttcgattttc 16436695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 16457832 - 16457896
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    |||||| |||||||| || |||||||||||||||| ||||||||| |||| ||| ||||| ||||    
T  16457832 ggtattggcttgggaccttggagtgtgctcctcctcaaggtctcatgttcaattctccccggtgc 16457896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 18596055 - 18595999
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttc 86  Q
    |||||| ||||| || |||||| |||||||||||| ||||||| |||||||||||||    
T  18596055 ggtattggcttgtgacctgggaatgtgctcctcctcaaggtcttaggttcgattttc 18595999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 29692440 - 29692392
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggtt 78  Q
    |||||| | |||||||||||||||||||||||||| || ||||||||||    
T  29692440 ggtattggattgggatctgggagtgtgctcctcctcaaagtctcaggtt 29692392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 25979194 - 25979245
Alignment:
Q  32 tatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||| |||||| || ||||||||| |||||||| ||||||||||||||||||    
T  25979194 tattggcttggaatttgggagtgttctcctcctcaaggtctcaggttcgatt 25979245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 83
Target Start/End: Complemental strand, 3584720 - 3584686
Alignment:
Q  49 ggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||||||||||||||||||||||||| ||||    
T  3584720 ggagtgtgctcctccttaaggtctcaggtttgatt 3584686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 24895066 - 24895120
Alignment:
Q  39 ttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtg 93  Q
    |||||| || ||||| |||||||||| ||| ||||||||||||||||||| ||||    
T  24895066 ttgggaccttggagtatgctcctcctcaagctctcaggttcgattttccctagtg 24895120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 14495851 - 14495814
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcag 75  Q
    |||||||||||||||||||||||||||  |||||||||    
T  14495851 cttgggatctgggagtgtgctcctcctcgaggtctcag 14495814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 17028301 - 17028265
Alignment:
Q  47 tgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  17028301 tgggagtgtgctcctcctcaaggtctcaggtttgatt 17028265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 65
Target Start/End: Complemental strand, 17761402 - 17761374
Alignment:
Q  37 gcttgggatctgggagtgtgctcctcctt 65  Q
    |||||||||||||||||||||||||||||    
T  17761402 gcttgggatctgggagtgtgctcctcctt 17761374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 42327449 - 42327396
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||||||    
T  42327449 ggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgatt 42327396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 21213791 - 21213855
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    |||||| |||||||| ||||||||||| |||||||| ||||||||||||||||| ||||| ||||    
T  21213791 ggtattggcttgggacctgggagtgtgttcctccttgaggtctcaggttcgattctccccggtgc 21213855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 37480097 - 37480156
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttcccc 89  Q
    |||||| |||||||| ||| ||||||||||||||| |||||||||||||||||| |||||    
T  37480097 ggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctcccc 37480156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 29503293 - 29503351
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccc 88  Q
    |||||| | |||||| ||||||||||||||||||| |||||||||||||||||| ||||    
T  29503293 ggtattggtttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctccc 29503351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 12994422 - 12994377
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||    
T  12994422 cttgggacctgggagtgtgctcctccttaaggtctcaagttcgatt 12994377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 39715022 - 39715075
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccag 91  Q
    ||||||| |||||||||||||||||||  ||||||||||||||||| |||||||    
T  39715022 cttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctccccag 39715075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 23052577 - 23052513
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    |||||| ||||||||  |||||||||||| ||||| |||||||||||||||||| |||| |||||    
T  23052577 ggtattggcttgggacttgggagtgtgcttctcctcaaggtctcaggttcgattctccctagtgc 23052513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 4262354 - 4262303
Alignment:
Q  32 tatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||| |||||||| |||| |||||||||||||| ||||||||||||||||||    
T  4262354 tattggcttgggacctggcagtgtgctcctcctcaaggtctcaggttcgatt 4262303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 12086183 - 12086130
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||| |||| |||||||||||||| |||||||| |||||||||    
T  12086183 ggtattggcttgggacctggaagtgtgctcctcctcaaggtctcgggttcgatt 12086130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 16918632 - 16918579
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| | |||||||||||||||||||||||||| ||||||| ||||| ||||    
T  16918632 ggtattggtttgggatctgggagtgtgctcctcctcaaggtcttaggttggatt 16918579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 40416428 - 40416391
Alignment:
Q  46 ctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||| |||||||||||||||||||||||||||||    
T  40416428 ctgggagtatgctcctccttaaggtctcaggttcgatt 40416391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 21195713 - 21195677
Alignment:
Q  47 tgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||||||||||||| ||||||||||||||||||    
T  21195713 tgggagtgtgctcctcctcaaggtctcaggttcgatt 21195677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 30410603 - 30410547
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttc 86  Q
    |||||| |||||||| || |||||||||||||||| |||| |||| |||||||||||    
T  30410603 ggtattggcttgggacctaggagtgtgctcctcctcaaggactcatgttcgattttc 30410547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 33582004 - 33582048
Alignment:
Q  39 ttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| ||| |||||||||||||||| |||||||||||||||||    
T  33582004 ttgggacctgagagtgtgctcctccttgaggtctcaggttcgatt 33582048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 17737661 - 17737614
Alignment:
Q  47 tgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    |||||||||||||||||| ||||||||| |||||||| |||| |||||    
T  17737661 tgggagtgtgctcctcctcaaggtctcatgttcgattatccctagtgc 17737614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 8192526 - 8192481
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||    
T  8192526 gcttgggatcttggagtgtgctcct-ctcaaggtctcaggttcgatt 8192481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 83
Target Start/End: Original strand, 13803536 - 13803570
Alignment:
Q  49 ggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||||||||||| ||||||||||||||||||    
T  13803536 ggagtgtgctcctcctcaaggtctcaggttcgatt 13803570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 14500306 - 14500352
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||| ||||||||||||||||||||||  ||||||||| |||||||    
T  14500306 gcttgagatctgggagtgtgctcctcctctaggtctcagattcgatt 14500352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 28194308 - 28194263
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||||| ||||||||||||| |||||||||| ||||||||||    
T  28194308 gcttgggatcttggagtgtgctcct-cttaaggtcttaggttcgatt 28194263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 42922436 - 42922490
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctcct-taaggtctcaggttcgatt 83  Q
    |||||| |||||| | |||||||||||||||||||  ||||||||||||||||||    
T  42922436 ggtattggcttggaacctgggagtgtgctcctcctcaaaggtctcaggttcgatt 42922490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 3001409 - 3001454
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||| ||||| ||||||||||||||||| || ||||||||||||||    
T  3001409 cttgagatctaggagtgtgctcctccttgagatctcaggttcgatt 3001454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 4439025 - 4438980
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||||| ||||||||||||||| |||||| || ||||||||    
T  4439025 cttgggatctgagagtgtgctcctcctcaaggtcgcatgttcgatt 4438980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 11251109 - 11251162
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| ||||||||  ||| |||||||||||||| ||||||||||||| ||||    
T  11251109 ggtattggcttgggacttggaagtgtgctcctcctcaaggtctcaggtttgatt 11251162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 19244139 - 19244184
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||| ||| ||||||||||||||  ||||||||||||||||||    
T  19244139 cttgggacctgagagtgtgctcctccccaaggtctcaggttcgatt 19244184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 80
Target Start/End: Original strand, 25637182 - 25637223
Alignment:
Q  39 ttgggatctgggagtgtgctcctccttaaggtctcaggttcg 80  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  25637182 ttgggatctgggagtgtgctccttctcgaggtctcaggttcg 25637223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 26482122 - 26482178
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    |||||||| || |||||||||||||| | |||||||||||||||||| ||| ||||||    
T  26482122 gcttgggacctaggagtgtgctcctc-tcaaggtctcaggttcgattctcctcagtgc 26482178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 28846721 - 28846766
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||| |||||||||||||||||||  | |||||||||||||||    
T  28846721 cttgggacctgggagtgtgctcctcctcgatgtctcaggttcgatt 28846766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 30359683 - 30359739
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    |||||||| || |||||||||||||||| |||||||||  ||||||| ||||||||||    
T  30359683 gcttgggaccttggagtgtgctcctcctcaaggtctca-tttcgattctccccagtgc 30359739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 83
Target Start/End: Complemental strand, 34041630 - 34041589
Alignment:
Q  42 ggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||| ||||||||||||||| ||||||||||||| ||||    
T  34041630 ggatctgagagtgtgctcctcctcaaggtctcaggtttgatt 34041589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 94
Target Start/End: Complemental strand, 41908673 - 41908628
Alignment:
Q  49 ggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    |||||||||||||||| ||||||||| |||||||| ||||| ||||    
T  41908673 ggagtgtgctcctcctcaaggtctcaagttcgattatccccggtgc 41908628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 42602576 - 42602629
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||| |||||||||||||||| || ||||||| ||||| ||||    
T  42602576 ggtattggcttgggacctgggagtgtgctccttctcaaggtcttaggtttgatt 42602629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 6099565 - 6099514
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttcccc 89  Q
    |||||||| || |||||||||||||| | |||||||||||||||||| |||||    
T  6099565 gcttgggaccttggagtgtgctcctc-tcaaggtctcaggttcgattctcccc 6099514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 7799089 - 7799025
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    |||||| ||||||||  ||||||||||||||||||  || |||||| ||||||| || |||||||    
T  7799089 ggtattggcttgggacttgggagtgtgctcctcctcgagatctcagattcgattctctccagtgc 7799025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 31573682 - 31573642
Alignment:
Q  43 gatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||||||||||| | |||||||||||||||    
T  31573682 gatctgagagtgtgctcctccttgatgtctcaggttcgatt 31573642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 79
Target Start/End: Complemental strand, 33839297 - 33839265
Alignment:
Q  47 tgggagtgtgctcctccttaaggtctcaggttc 79  Q
    |||||||||||||||||| ||||||||||||||    
T  33839297 tgggagtgtgctcctcctcaaggtctcaggttc 33839265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 19703541 - 19703478
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtg 93  Q
    |||||| |||||||| ||| ||||||||||||||| |||||||||||||||||| |||| ||||    
T  19703541 ggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctccctagtg 19703478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 968384 - 968437
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||| |||||||||||||||||||  |||||||||||||||||    
T  968384 ggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgatt 968437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 3624602 - 3624655
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||| ||||||||||||||||| | ||||||||||||||||||    
T  3624602 ggtattggcttgggacctgggagtgtgctcctcttcaaggtctcaggttcgatt 3624655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 16852362 - 16852415
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||| |||||||||||||||||||  |||||||||||||||||    
T  16852362 ggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgatt 16852415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 35690118 - 35690065
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||||||||| || |||||||||| ||||||||||||||||||    
T  35690118 ggtattggcttgggatctgggtgtttgctcctcctcaaggtctcaggttcgatt 35690065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 2203514 - 2203578
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||| || ||| ||||| ||||    
T  2203514 ggtattggcttgggacctgggagtgtgctcctcctcaaggtctcagggtcaattctccccggtgc 2203578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 6569823 - 6569772
Alignment:
Q  32 tatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||| ||||||||||||||||||||||||||||| |||| ||| ||||||||    
T  6569823 tattggcttgggatctgggagtgtgctcctcctttaggtttcatgttcgatt 6569772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 11819805 - 11819851
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||  |||||||||||||||||| ||||||||||||||||||    
T  11819805 gcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgatt 11819851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 27750759 - 27750805
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||  |||||||||||||||||| ||||||||||||||||||    
T  27750759 gcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgatt 27750805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 89
Target Start/End: Original strand, 36205230 - 36205276
Alignment:
Q  43 gatctgggagtgtgctcctccttaaggtctcaggttcgattttcccc 89  Q
    |||||||||||||||||||||| ||||||||| |||||||| |||||    
T  36205230 gatctgggagtgtgctcctcctcaaggtctcatgttcgattctcccc 36205276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 6536542 - 6536591
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttc 79  Q
    |||||| |||||||| || |||||||||||||||| ||||||||||||||    
T  6536542 ggtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttc 6536591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 18540320 - 18540373
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||| |||||||||| || ||||| ||||||||||||||||||    
T  18540320 ggtattggcttgggacctgggagtgtacttctcctcaaggtctcaggttcgatt 18540373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 23361695 - 23361654
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttc 79  Q
    |||||||| |||||||||||||||||| ||||||||||||||    
T  23361695 cttgggatatgggagtgtgctcctcctcaaggtctcaggttc 23361654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 28783082 - 28783135
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| ||||| || ||||||||||||||||||| ||||||||| ||||||||    
T  28783082 ggtattggcttgagacctgggagtgtgctcctcctcaaggtctcatgttcgatt 28783135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 29431033 - 29431086
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| ||||||||  ||||||||||||||||||| ||| |||||||||||||    
T  29431033 ggtattggcttgggacttgggagtgtgctcctccttgaggcctcaggttcgatt 29431086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 29858103 - 29858050
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||| | |||||||||||||||||  |||||||||||||||||    
T  29858103 ggtattggcttgggaccagggagtgtgctcctcctcgaggtctcaggttcgatt 29858050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 28750600 - 28750651
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttcccc 89  Q
    ||||| ||||||||||| |||||||||||||||||  ||||||||| |||||    
T  28750600 cttggaatctgggagtgcgctcctccttaaggtcttcggttcgattctcccc 28750651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 94
Target Start/End: Complemental strand, 28787529 - 28787486
Alignment:
Q  51 agtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  28787529 agtgtgctcctcctcaaggtctcaggtttgattctccccagtgc 28787486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 33017238 - 33017289
Alignment:
Q  32 tatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||| |||||| | |||| |||||||||||||| ||||||||||||||||||    
T  33017238 tattggcttggaacctggaagtgtgctcctcctcaaggtctcaggttcgatt 33017289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 34628666 - 34628717
Alignment:
Q  32 tatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||| |||||||||||||||||||| | ||||| || |||||||||||||||    
T  34628666 tattggcttgggatctgggagtgtgtttctcctcaaagtctcaggttcgatt 34628717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 79
Target Start/End: Original strand, 26688894 - 26688936
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttc 79  Q
    |||||||| || |||||||||||||||| ||||||||||||||    
T  26688894 gcttgggaccttggagtgtgctcctcctcaaggtctcaggttc 26688936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 44780161 - 44780115
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||  |||||||||||||||||| ||||||||||||| ||||    
T  44780161 gcttgggacttgggagtgtgctcctcctcaaggtctcaggtttgatt 44780115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 4830509 - 4830558
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttc 79  Q
    |||||||| |||||||||| ||||||| |||||||  |||||||||||||    
T  4830509 ggtatttgtttgggatctgagagtgtgttcctcctcgaggtctcaggttc 4830558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 7140731 - 7140784
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||||||||| |||||||||||||  || |||||| |||||||    
T  7140731 ggtattggcttgggatctgggtgtgtgctcctcctcgagctctcagattcgatt 7140784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 8485021 - 8485074
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||||||||| ||| ||||||||||||| || ||||||||  |||||||    
T  8485021 ggtatttgcttgggacctgtgagtgtgctcctctttgaggtctcattttcgatt 8485074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 8794399 - 8794346
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||| | |||| |||||||||||||| | ||||||||||||||||    
T  8794399 ggtattggcttggaacctggaagtgtgctcctcctcagggtctcaggttcgatt 8794346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 11492127 - 11492074
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| ||||| ||||||||||||||||||| ||  |||||| ||||||||||    
T  11492127 ggtattggcttgagatctgggagtgtgctccttctcgaggtcttaggttcgatt 11492074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 22193402 - 22193365
Alignment:
Q  46 ctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  22193402 ctgggagtgtgctcctcctcaaggtcttaggttcgatt 22193365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 24675555 - 24675510
Alignment:
Q  41 gggatctgggagtgtgctcctccttaaggtctcaggttcgattttc 86  Q
    |||||||| |||||||||||| || |||||||||| ||||||||||    
T  24675555 gggatctgagagtgtgctccttctcaaggtctcagattcgattttc 24675510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 30483938 - 30483889
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttc 79  Q
    |||||| ||||||||| |||||||||||||||||| |  |||||||||||    
T  30483938 ggtattggcttgggatatgggagtgtgctcctcctcagagtctcaggttc 30483889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 3305233 - 3305189
Alignment:
Q  39 ttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||||||||| ||||||||||| |||||||||  |||||||    
T  3305233 ttgggatctgggagcgtgctcctcctcaaggtctcaaattcgatt 3305189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 3524448 - 3524396
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttcccc 89  Q
    |||||||| || |||||||||||||||| ||||||| |||||| ||| |||||    
T  3524448 gcttgggaccttggagtgtgctcctcctcaaggtcttaggttcaattctcccc 3524396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 12988450 - 12988502
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgat 82  Q
    |||||| |||||| | |||| |||||||||||||| ||||| |||||||||||    
T  12988450 ggtattggcttggaacctggaagtgtgctcctcctcaaggtttcaggttcgat 12988502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 30774790 - 30774734
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttc 86  Q
    |||||| | ||||||||||| |||||| |||||||  ||||||||| ||||||||||    
T  30774790 ggtattggtttgggatctggaagtgtgttcctcctcgaggtctcagattcgattttc 30774734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 83
Target Start/End: Complemental strand, 33727906 - 33727874
Alignment:
Q  51 agtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||||||||| ||||||||||||||||||    
T  33727906 agtgtgctcctcctcaaggtctcaggttcgatt 33727874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 10338228 - 10338165
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtg 93  Q
    |||||| |||||||| || |||||||||||||||| ||||||||||||||||||  ||||||||    
T  10338228 ggtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcgattccccccagtg 10338165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 6385892 - 6385937
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||    
T  6385892 cttgggacctgggactgtgctcctccttaaggtctcaggttcgatt 6385937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 33549126 - 33549179
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||| |||||||||||||||||||  |||||||||||||||||    
T  33549126 ggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgatt 33549179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 81
Target Start/End: Complemental strand, 23910157 - 23910114
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcga 81  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||    
T  23910157 cttgggacctgggagtgtgctcctcctcaaggtctcaggttcga 23910114  T

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Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 20213070 - 20213116
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||| ||||||||||||||||||| || |||||||||||||||    
T  20213070 gcttgggacctgggagtgtgctcctcctcaatgtctcaggttcgatt 20213116  T

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Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 22107093 - 22107139
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||| ||||||||||||||||||| || |||||||||||||||    
T  22107093 gcttgggacctgggagtgtgctcctcctcaatgtctcaggttcgatt 22107139  T

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Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 4105092 - 4105129
Alignment:
Q  49 ggagtgtgctcctccttaaggtctcaggttcgattttc 86  Q
    |||||||||||||||||||| |||||||||||||||||    
T  4105092 ggagtgtgctcctccttaagatctcaggttcgattttc 4105129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 12188357 - 12188304
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||| ||||||||||||||||||| ||||| ||| ||||||||    
T  12188357 ggtattggcttgggacctgggagtgtgctcctcctcaaggtttcaagttcgatt 12188304  T

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Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 28363959 - 28364012
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| | |||||||||| ||||||||||||||| |||||||||| |||||||    
T  28363959 ggtattggtttgggatctgcgagtgtgctcctcctcaaggtctcagattcgatt 28364012  T

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Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 30127422 - 30127475
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| ||||||| |||||||||||||||||| |  |||||||||||||||||    
T  30127422 ggtattggcttggggtctgggagtgtgctcctcttcgaggtctcaggttcgatt 30127475  T

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Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 14278164 - 14278112
Alignment:
Q  31 gtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||| |||| ||| ||||||||| ||||||||||||||||||||||| ||||    
T  14278164 gtattggctttggacctgggagtgcgctcctccttaaggtctcaggtttgatt 14278112  T

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Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 31623045 - 31622997
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggtt 78  Q
    |||||| |||||||| |||||||||||||||||||  ||||||||||||    
T  31623045 ggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggtt 31622997  T

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Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 11423596 - 11423651
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtg 93  Q
    |||||||| ||||||| |||| |||||  |||||||||||||||||||| ||||||    
T  11423596 cttgggatttgggagtatgcttctcctcgaggtctcaggttcgattttctccagtg 11423651  T

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Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 14446217 - 14446275
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccc 88  Q
    |||||| | ||||||||||| ||||||||| ||||| || |||||||||||||| ||||    
T  14446217 ggtattcgtttgggatctggaagtgtgctcttcctttagatctcaggttcgattctccc 14446275  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 8639129 - 8639182
Alignment:
Q  31 gtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattt 84  Q
    ||||| ||||| ||||||| | |||||||||||| |||||||||| ||||||||    
T  8639129 gtattggcttgagatctggaaatgtgctcctcctcaaggtctcagcttcgattt 8639182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 24641236 - 24641191
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||||||||||||||||||||||  |||| | ||||||||||    
T  24641236 cttgggatctgggagtgtgctcctcctcgaggtttaaggttcgatt 24641191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 11103488 - 11103436
Alignment:
Q  31 gtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||| ||||||||  ||| ||||||||||||||||||||||| | |||||||    
T  11103488 gtattcgcttgggacttggtagtgtgctcctccttaaggtctccgattcgatt 11103436  T

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Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 14199984 - 14199948
Alignment:
Q  47 tgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||||||||||||||| |||||||||| |||||||    
T  14199984 tgggagtgtgctcctcctcaaggtctcagattcgatt 14199948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 17149629 - 17149586
Alignment:
Q  39 ttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||| ||||||||||||| || ||||||||||||||||||    
T  17149629 ttgggatcttggagtgtgctcct-ctcaaggtctcaggttcgatt 17149586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 21418492 - 21418556
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccccagtgc 94  Q
    |||||| ||||||||  ||||||||||||||||||  | |||||| |||||||| |||| |||||    
T  21418492 ggtattggcttgggacttgggagtgtgctcctcctccatgtctcaagttcgattctccctagtgc 21418556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 34786507 - 34786455
Alignment:
Q  31 gtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||| ||||||||||||||||||||||||| ||  | |||||| ||||||||    
T  34786507 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgatt 34786455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 15377 - 15324
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||||| |||||||||||||||||||  |||||||||||||||||    
T  15377 ggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgatt 15324  T

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Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 19901 - 19848
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||    
T  19901 ggtattggcttgggatctgggagtctgctcctccttgaggtctcaagttcgatt 19848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 894 - 841
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| ||||||||||||||| ||||||||||||  | |||||||||||||||    
T  894 ggtattggcttgggatctgggaatgtgctcctcctcgaagtctcaggttcgatt 841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 20016 - 19963
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| |||||| | |||||||| |||||||||| ||||||||||||||||||    
T  20016 ggtattggcttggaacctgggagtatgctcctcctcaaggtctcaggttcgatt 19963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 95025 - 94976
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttc 79  Q
    |||||| |||||| | ||||||||||||||||||| ||||||||||||||    
T  95025 ggtattggcttggaacctgggagtgtgctcctcctcaaggtctcaggttc 94976  T

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Target: scaffold0300 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 4369 - 4415
Alignment:
Q  37 gcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||||||| ||||||||||||||| |||||||| | ||||||||||    
T  4369 gcttgggatttgggagtgtgctccttcttaaggttttaggttcgatt 4415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 7780 - 7727
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| ||||| || |||  |||||||||||||||||||||||| ||||||||    
T  7780 ggtattggcttgagacctgaaagtgtgctcctccttaaggtctcaagttcgatt 7727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 25401 - 25348
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| ||||| ||  ||||||||||||||| || ||||||||||||||||||    
T  25401 ggtattggcttgagacttgggagtgtgctccttctcaaggtctcaggttcgatt 25348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 43386 - 43333
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    |||||| ||||||||  |||||||||| |||| |||||||||||| ||||||||    
T  43386 ggtattggcttgggacttgggagtgtgttccttcttaaggtctcatgttcgatt 43333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 92977 - 93022
Alignment:
Q  38 cttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||| ||||||||||||| |||||||| |||||| ||||||||||    
T  92977 cttggaatctgggagtgtgatcctccttgaggtctgaggttcgatt 93022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 157041 - 156987
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttc 86  Q
    |||||| ||||| ||||||||||||||||||||||  |||  |||||||||||||||    
T  157041 ggtattggcttgagatctgggagtgtgctcctcctcgagg--tcaggttcgattttc 156987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 81609 - 81560
Alignment:
Q  39 ttgggatctgggagtgtgctcctccttaaggtctcaggttcgattttccc 88  Q
    |||| |||||| |||||||||||||| |||||||||| ||||||| ||||    
T  81609 ttggaatctggaagtgtgctcctcctcaaggtctcagattcgattctccc 81560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 6973 - 6921
Alignment:
Q  30 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgat 82  Q
    |||||| ||||||||   ||||||||||||||||| || ||||||||||||||    
T  6973 ggtattggcttgggactggggagtgtgctcctcctcaaagtctcaggttcgat 6921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 112305 - 112357
Alignment:
Q  31 gtatttgcttgggatctgggagtgtgctcctccttaaggtctcaggttcgatt 83  Q
    ||||| |||||| ||||||||||||| ||||| || |||||| ||||||||||    
T  112305 gtattggcttggaatctgggagtgtggtcctctttgaggtctgaggttcgatt 112357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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