View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5973_high_8 (Length: 304)
Name: NF5973_high_8
Description: NF5973
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5973_high_8 |
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Alignment Details
Target: chr6 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 10 - 288
Target Start/End: Complemental strand, 58898 - 58620
Alignment:
| Q |
10 |
gcaaaggctgagtatgatgagtctggaccatcaattgtgcataggaaatgtttctaaattatctgagcaatatggttattgaaggacaagactgctcttt |
109 |
Q |
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| T |
58898 |
gcaaaggctgagtatgatgagtctggaccatcaattgtgcataggaaatgtttctaaattatctgagcaatatggttattgaaggacaagactgctcttt |
58799 |
T |
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| Q |
110 |
tgtaaccctttcattctagcttttgttattctccaggagtttattgtcaaatcatccaattcatcttcattattattatatatgtattgataagnnnnnn |
209 |
Q |
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| T |
58798 |
tgtaaccctttcattctagcttttgttattctccaggagtttattgtcaaatcatccaattcatcttcattattattatatatgtattgataagtttttt |
58699 |
T |
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| Q |
210 |
ngacattcatactgcgtcgaaattagctgagactatcaaatgaactaagcatgtgttcttttcttttgtatgcaaagtt |
288 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
58698 |
tgacattcatactgcgtcgaaattagctgagactatcaaatgaactaagcatgtgttcttttcttttgtatgcaaagtt |
58620 |
T |
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