View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5974_high_6 (Length: 307)
Name: NF5974_high_6
Description: NF5974
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5974_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 44114796 - 44115050
Alignment:
| Q |
1 |
tattcaaattcctataattatagaatattaattagaaaacgtgtnnnnnnngatttgggtactgcaatagacacaattaagaattgcgatgatcaagctt |
100 |
Q |
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| T |
44114796 |
tattcaaattcctataactatagaatattaattagaaaacgtgtaaaaaaagatttgggtactgcaatagacacaattaagaattgcgatgatcaagctt |
44114895 |
T |
|
| Q |
101 |
ctattcacattggaatattattcatttttgggttcagttaagattttataattgctatttagtttccaatgtgaataattaactctggtttcaaagtggg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44114896 |
ctattcacattggaatattattcatttttgggttcagttaagattttataattgctatttagtttccaatgtgaataattaactctggtttcaaagtggg |
44114995 |
T |
|
| Q |
201 |
attttatggtgctttatatctcagtcttgaaacataaagatctgattgatcgttt |
255 |
Q |
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||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44114996 |
attttctggtgctttatatctcagtcttgaaacataaagatctgattgatcgttt |
44115050 |
T |
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