View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5975-Insertion-18 (Length: 215)

Name: NF5975-Insertion-18
Description: NF5975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5975-Insertion-18
NF5975-Insertion-18
[»] chr7 (29 HSPs)
chr7 (40-215)||(37786758-37786933)
chr7 (52-215)||(19830423-19830586)
chr7 (51-215)||(19590527-19590691)
chr7 (51-215)||(32004993-32005157)
chr7 (39-215)||(38858633-38858809)
chr7 (52-213)||(4641443-4641604)
chr7 (52-215)||(29100230-29100393)
chr7 (51-215)||(34534170-34534334)
chr7 (51-215)||(35289280-35289444)
chr7 (51-215)||(2659219-2659383)
chr7 (55-211)||(23953112-23953268)
chr7 (51-209)||(19590909-19591068)
chr7 (51-209)||(2658841-2659000)
chr7 (52-215)||(4478079-4478242)
chr7 (51-209)||(38859025-38859184)
chr7 (51-208)||(32004616-32004774)
chr7 (51-207)||(37787153-37787310)
chr7 (51-209)||(19830804-19830962)
chr7 (51-187)||(28583441-28583577)
chr7 (51-209)||(34533793-34533952)
chr7 (51-208)||(35288905-35289063)
chr7 (62-209)||(29099863-29100011)
chr7 (51-191)||(38160953-38161093)
chr7 (52-209)||(4641828-4641983)
chr7 (51-209)||(23952732-23952892)
chr7 (51-190)||(28584326-28584465)
chr7 (183-215)||(32427400-32427432)
chr7 (47-208)||(9393734-9393894)
chr7 (42-94)||(34594576-34594628)
[»] chr1 (42 HSPs)
chr1 (51-214)||(18984121-18984284)
chr1 (51-215)||(50970657-50970821)
chr1 (51-215)||(5540197-5540361)
chr1 (43-215)||(15646574-15646746)
chr1 (52-215)||(15173099-15173262)
chr1 (41-215)||(29869612-29869786)
chr1 (49-215)||(33144298-33144464)
chr1 (51-215)||(29306955-29307119)
chr1 (52-215)||(5962957-5963120)
chr1 (51-215)||(21856422-21856586)
chr1 (51-215)||(8678921-8679084)
chr1 (48-212)||(39154018-39154182)
chr1 (51-214)||(17433218-17433381)
chr1 (51-215)||(9018975-9019139)
chr1 (51-215)||(26859439-26859602)
chr1 (51-215)||(29307320-29307485)
chr1 (48-209)||(21856041-21856203)
chr1 (48-211)||(17433597-17433761)
chr1 (51-209)||(8678543-8678702)
chr1 (51-209)||(39154404-39154563)
chr1 (51-207)||(50970280-50970437)
chr1 (51-209)||(5539818-5539977)
chr1 (51-209)||(29870003-29870162)
chr1 (51-208)||(4636356-4636514)
chr1 (45-209)||(18984503-18984668)
chr1 (57-209)||(33143925-33144078)
chr1 (51-209)||(15173478-15173636)
chr1 (51-213)||(9019343-9019506)
chr1 (51-209)||(15646194-15646353)
chr1 (44-189)||(52268285-52268430)
chr1 (51-166)||(26859061-26859176)
chr1 (51-209)||(5962580-5962739)
chr1 (122-215)||(4636045-4636138)
chr1 (48-165)||(52269177-52269294)
chr1 (51-209)||(17112284-17112442)
chr1 (41-124)||(47826956-47827039)
chr1 (51-135)||(2733416-2733500)
chr1 (57-149)||(47827033-47827125)
chr1 (89-176)||(39843193-39843280)
chr1 (185-215)||(17088520-17088550)
chr1 (85-130)||(50419725-50419770)
chr1 (85-189)||(52235074-52235178)
[»] chr4 (60 HSPs)
chr4 (45-215)||(33109680-33109850)
chr4 (48-215)||(38962198-38962365)
chr4 (40-214)||(4219548-4219722)
chr4 (47-215)||(46193784-46193952)
chr4 (46-215)||(15523613-15523782)
chr4 (51-215)||(12234331-12234495)
chr4 (47-215)||(23494441-23494609)
chr4 (51-215)||(25447615-25447779)
chr4 (51-211)||(11153530-11153690)
chr4 (51-215)||(25937672-25937836)
chr4 (51-215)||(51020799-51020963)
chr4 (52-215)||(22434557-22434718)
chr4 (51-211)||(22170320-22170479)
chr4 (52-215)||(45082435-45082596)
chr4 (52-215)||(54995447-54995609)
chr4 (51-215)||(48526198-48526361)
chr4 (52-215)||(2118675-2118837)
chr4 (51-209)||(22434181-22434340)
chr4 (51-209)||(45082808-45082967)
chr4 (51-211)||(46193407-46193568)
chr4 (51-209)||(25447249-25447408)
chr4 (51-208)||(15523237-15523395)
chr4 (52-209)||(48526565-48526723)
chr4 (51-165)||(23494872-23494986)
chr4 (47-209)||(2118291-2118454)
chr4 (51-209)||(11153148-11153307)
chr4 (51-209)||(12234713-12234872)
chr4 (51-209)||(20470895-20471054)
chr4 (52-209)||(4219943-4220101)
chr4 (52-209)||(54995072-54995230)
chr4 (51-175)||(33109883-33110007)
chr4 (118-215)||(12503815-12503912)
chr4 (40-208)||(25938056-25938225)
chr4 (51-209)||(51021180-51021338)
chr4 (52-209)||(18751602-18751760)
chr4 (51-190)||(48293596-48293735)
chr4 (51-191)||(20958264-20958402)
chr4 (48-163)||(18763951-18764066)
chr4 (52-185)||(16690939-16691072)
chr4 (66-209)||(12503453-12503597)
chr4 (51-190)||(44892552-44892691)
chr4 (51-166)||(35363028-35363144)
chr4 (51-190)||(48294946-48295086)
chr4 (56-187)||(20957196-20957327)
chr4 (67-190)||(43243685-43243807)
chr4 (52-191)||(48713749-48713888)
chr4 (51-185)||(48708297-48708431)
chr4 (67-187)||(43281198-43281317)
chr4 (51-190)||(44890519-44890658)
chr4 (51-185)||(16691481-16691614)
chr4 (46-175)||(10258306-10258435)
chr4 (107-190)||(43242328-43242411)
chr4 (51-114)||(16318256-16318319)
chr4 (158-215)||(18751981-18752038)
chr4 (42-215)||(17503967-17504139)
chr4 (118-190)||(44220781-44220853)
chr4 (51-157)||(55189530-55189636)
chr4 (185-215)||(17504339-17504369)
chr4 (185-215)||(35193443-35193473)
chr4 (51-131)||(35193766-35193846)
[»] chr2 (37 HSPs)
chr2 (37-214)||(26538085-26538262)
chr2 (52-215)||(11090524-11090687)
chr2 (52-215)||(14432145-14432308)
chr2 (51-214)||(239355-239517)
chr2 (51-214)||(22374322-22374485)
chr2 (52-215)||(40815724-40815887)
chr2 (45-215)||(40027136-40027306)
chr2 (52-215)||(8425739-8425902)
chr2 (51-215)||(1978110-1978274)
chr2 (51-215)||(18451210-18451374)
chr2 (51-215)||(43058335-43058499)
chr2 (51-215)||(26538457-26538622)
chr2 (51-215)||(28616615-28616780)
chr2 (55-215)||(3025472-3025631)
chr2 (51-209)||(7446730-7446889)
chr2 (51-209)||(40815347-40815506)
chr2 (51-205)||(7446344-7446497)
chr2 (51-190)||(20444751-20444890)
chr2 (51-209)||(18450832-18450991)
chr2 (48-191)||(15551498-15551641)
chr2 (51-209)||(22374709-22374868)
chr2 (52-209)||(40027524-40027682)
chr2 (51-166)||(28847123-28847238)
chr2 (51-190)||(35779710-35779849)
chr2 (51-190)||(35781067-35781206)
chr2 (41-209)||(28616998-28617167)
chr2 (51-209)||(239736-239895)
chr2 (51-209)||(11090904-11091063)
chr2 (51-190)||(20440436-20440574)
chr2 (51-209)||(43058717-43058875)
chr2 (51-208)||(3025848-3026004)
chr2 (49-190)||(8972237-8972378)
chr2 (51-175)||(1978528-1978652)
chr2 (52-208)||(8425358-8425514)
chr2 (51-209)||(14432525-14432684)
chr2 (49-189)||(15552459-15552598)
chr2 (51-215)||(28143410-28143573)
[»] chr6 (35 HSPs)
chr6 (51-215)||(11276961-11277125)
chr6 (51-215)||(18257139-18257303)
chr6 (51-215)||(10900309-10900473)
chr6 (51-215)||(20741102-20741266)
chr6 (51-215)||(15828020-15828184)
chr6 (51-215)||(1149810-1149975)
chr6 (51-208)||(18505305-18505462)
chr6 (51-215)||(12935536-12935700)
chr6 (51-215)||(31470695-31470859)
chr6 (51-209)||(2319674-2319832)
chr6 (51-215)||(11444989-11445153)
chr6 (51-215)||(28472639-28472802)
chr6 (51-215)||(29859828-29859991)
chr6 (52-213)||(2322600-2322760)
chr6 (52-215)||(10899942-10900106)
chr6 (51-209)||(12935159-12935318)
chr6 (51-212)||(4811374-4811535)
chr6 (40-209)||(11445371-11445541)
chr6 (51-215)||(23074001-23074154)
chr6 (51-209)||(22219737-22219896)
chr6 (51-209)||(23075512-23075671)
chr6 (51-202)||(15827640-15827794)
chr6 (52-209)||(18504922-18505080)
chr6 (40-209)||(31470306-31470476)
chr6 (51-215)||(11276592-11276757)
chr6 (51-209)||(20741485-20741647)
chr6 (47-191)||(29033432-29033577)
chr6 (51-166)||(18257565-18257680)
chr6 (49-191)||(29035040-29035182)
chr6 (52-185)||(3835135-3835268)
chr6 (51-190)||(18296147-18296285)
chr6 (51-175)||(4811675-4811799)
chr6 (51-137)||(1149467-1149553)
chr6 (142-215)||(35163566-35163639)
chr6 (51-105)||(22534214-22534268)
[»] chr5 (45 HSPs)
chr5 (51-215)||(19359138-19359302)
chr5 (42-211)||(29455125-29455294)
chr5 (51-215)||(2865134-2865298)
chr5 (51-215)||(8647440-8647604)
chr5 (51-215)||(18183348-18183512)
chr5 (51-215)||(5819308-5819472)
chr5 (51-211)||(24362219-24362379)
chr5 (41-215)||(15708963-15709136)
chr5 (51-215)||(8460932-8461096)
chr5 (52-215)||(15372252-15372415)
chr5 (51-215)||(14215622-14215786)
chr5 (51-215)||(164570-164734)
chr5 (51-214)||(14463901-14464063)
chr5 (52-209)||(5818932-5819090)
chr5 (52-209)||(18182973-18183131)
chr5 (49-209)||(2864754-2864915)
chr5 (51-209)||(8647822-8647981)
chr5 (51-209)||(19359520-19359679)
chr5 (50-209)||(14215242-14215402)
chr5 (48-214)||(24331940-24332110)
chr5 (55-209)||(24361843-24361997)
chr5 (45-209)||(8461315-8461480)
chr5 (55-209)||(24325218-24325372)
chr5 (51-209)||(24331561-24331722)
chr5 (51-191)||(7349420-7349560)
chr5 (51-215)||(16018591-16018753)
chr5 (52-211)||(16018969-16019129)
chr5 (51-208)||(164193-164350)
chr5 (51-211)||(25000471-25000632)
chr5 (45-209)||(29454736-29454901)
chr5 (71-215)||(25000112-25000256)
chr5 (49-208)||(15371871-15372030)
chr5 (51-175)||(7348561-7348685)
chr5 (51-189)||(4623150-4623286)
chr5 (51-209)||(15709353-15709511)
chr5 (51-169)||(4222147-4222265)
chr5 (55-187)||(6019177-6019309)
chr5 (51-187)||(4219665-4219800)
chr5 (62-188)||(4624631-4624757)
chr5 (51-188)||(6018316-6018452)
chr5 (131-191)||(13814131-13814190)
chr5 (9-48)||(2591264-2591303)
chr5 (131-175)||(14462686-14462730)
chr5 (166-211)||(24325594-24325639)
chr5 (137-209)||(10721873-10721945)
[»] chr3 (57 HSPs)
chr3 (51-215)||(37726931-37727095)
chr3 (51-215)||(20840562-20840726)
chr3 (51-215)||(39555956-39556120)
chr3 (51-211)||(31779035-31779195)
chr3 (52-215)||(5136983-5137146)
chr3 (52-215)||(41046703-41046866)
chr3 (51-215)||(24300935-24301099)
chr3 (48-215)||(25853606-25853773)
chr3 (55-204)||(48452995-48453144)
chr3 (51-215)||(23644464-23644628)
chr3 (51-214)||(32535339-32535506)
chr3 (51-215)||(43973443-43973607)
chr3 (46-215)||(27393956-27394125)
chr3 (51-211)||(26837739-26837898)
chr3 (51-215)||(30104484-30104647)
chr3 (46-214)||(17464871-17465040)
chr3 (53-215)||(22425192-22425354)
chr3 (51-209)||(31778655-31778814)
chr3 (51-209)||(37727314-37727473)
chr3 (51-209)||(43973824-43973983)
chr3 (45-209)||(27393657-27393822)
chr3 (51-209)||(20840945-20841104)
chr3 (51-209)||(25853236-25853395)
chr3 (52-215)||(26274946-26275108)
chr3 (51-209)||(39555580-39555739)
chr3 (52-190)||(25612381-25612519)
chr3 (51-209)||(4275748-4275907)
chr3 (51-209)||(5137365-5137524)
chr3 (39-209)||(30098147-30098318)
chr3 (51-211)||(29801798-29801959)
chr3 (51-209)||(17464493-17464652)
chr3 (52-209)||(26837363-26837521)
chr3 (52-209)||(32534962-32535120)
chr3 (51-191)||(50116812-50116952)
chr3 (51-209)||(22424816-22424975)
chr3 (51-209)||(23644849-23645008)
chr3 (51-170)||(29801358-29801477)
chr3 (52-209)||(26274570-26274728)
chr3 (52-209)||(24300560-24300717)
chr3 (51-190)||(51474737-51474877)
chr3 (51-188)||(23228414-23228550)
chr3 (51-187)||(45965940-45966076)
chr3 (51-189)||(32697106-32697243)
chr3 (52-209)||(41047083-41047239)
chr3 (48-193)||(25420542-25420687)
chr3 (51-163)||(51473430-51473542)
chr3 (51-190)||(37220559-37220698)
chr3 (68-177)||(18010162-18010271)
chr3 (55-190)||(25419150-25419285)
chr3 (127-191)||(23227334-23227398)
chr3 (51-135)||(37222030-37222114)
chr3 (165-211)||(29801532-29801578)
chr3 (154-215)||(55192222-55192283)
chr3 (51-215)||(27200072-27200235)
chr3 (179-215)||(49407925-49407961)
chr3 (142-215)||(37075781-37075854)
chr3 (52-176)||(32695706-32695830)
[»] scaffold0295 (2 HSPs)
scaffold0295 (51-215)||(4795-4959)
scaffold0295 (49-209)||(5179-5336)
[»] chr8 (32 HSPs)
chr8 (51-215)||(19176669-19176833)
chr8 (40-215)||(9930036-9930211)
chr8 (51-208)||(41681136-41681292)
chr8 (42-215)||(12571856-12572030)
chr8 (51-215)||(31133222-31133386)
chr8 (51-215)||(11656457-11656622)
chr8 (51-215)||(44831624-44831788)
chr8 (52-215)||(33328161-33328324)
chr8 (53-215)||(13224645-13224806)
chr8 (51-215)||(9178015-9178178)
chr8 (51-209)||(13225023-13225182)
chr8 (52-209)||(9928912-9929070)
chr8 (51-209)||(19176292-19176451)
chr8 (45-209)||(44831243-44831408)
chr8 (40-209)||(11656841-11657011)
chr8 (52-209)||(12572235-12572393)
chr8 (51-207)||(34540934-34541091)
chr8 (51-209)||(33328524-33328683)
chr8 (51-209)||(41681518-41681677)
chr8 (51-208)||(31133605-31133763)
chr8 (51-209)||(33742924-33743082)
chr8 (96-215)||(33743298-33743417)
chr8 (52-215)||(4630171-4630328)
chr8 (51-203)||(4629799-4629952)
chr8 (51-157)||(11336959-11337065)
chr8 (52-187)||(10918129-10918264)
chr8 (128-190)||(43958264-43958326)
chr8 (51-190)||(8073956-8074094)
chr8 (141-209)||(9177724-9177793)
chr8 (40-80)||(10919700-10919740)
chr8 (51-81)||(9177669-9177699)
chr8 (48-94)||(43958208-43958254)
[»] scaffold0951 (2 HSPs)
scaffold0951 (51-215)||(1669-1833)
scaffold0951 (51-209)||(2051-2210)
[»] scaffold0273 (2 HSPs)
scaffold0273 (51-215)||(4586-4750)
scaffold0273 (88-209)||(4242-4364)
[»] scaffold0007 (3 HSPs)
scaffold0007 (43-215)||(64296-64468)
scaffold0007 (52-164)||(64735-64847)
scaffold0007 (44-215)||(205748-205918)
[»] scaffold0019 (1 HSPs)
scaffold0019 (51-215)||(134052-134216)
[»] scaffold1223 (2 HSPs)
scaffold1223 (48-211)||(752-914)
scaffold1223 (51-212)||(1122-1284)
[»] scaffold0432 (2 HSPs)
scaffold0432 (52-215)||(10252-10414)
scaffold0432 (47-156)||(9930-10039)
[»] scaffold0027 (2 HSPs)
scaffold0027 (51-215)||(42538-42701)
scaffold0027 (52-215)||(42172-42336)
[»] scaffold0176 (2 HSPs)
scaffold0176 (41-211)||(18827-18996)
scaffold0176 (51-146)||(19069-19164)
[»] scaffold0417 (2 HSPs)
scaffold0417 (68-211)||(10640-10783)
scaffold0417 (51-209)||(11007-11166)
[»] scaffold0157 (2 HSPs)
scaffold0157 (118-215)||(16565-16662)
scaffold0157 (66-209)||(16880-17024)
[»] scaffold0113 (1 HSPs)
scaffold0113 (53-175)||(28662-28784)
[»] scaffold0057 (2 HSPs)
scaffold0057 (52-190)||(61862-62000)
scaffold0057 (51-123)||(61030-61102)
[»] scaffold1585 (1 HSPs)
scaffold1585 (51-191)||(569-709)
[»] scaffold0076 (1 HSPs)
scaffold0076 (52-152)||(8451-8551)
[»] scaffold1696 (1 HSPs)
scaffold1696 (53-190)||(454-589)
[»] scaffold0168 (1 HSPs)
scaffold0168 (98-191)||(7691-7784)


Alignment Details
Target: chr7 (Bit Score: 152; Significance: 1e-80; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 40 - 215
Target Start/End: Original strand, 37786758 - 37786933
Alignment:
Q  40 taaaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattat 139  Q
    |||||| ||| |||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37786758 taaaataaaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattat 37786857  T
Q  140 catttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37786858 catttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 37786933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 52 - 215
Target Start/End: Original strand, 19830423 - 19830586
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  19830423 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 19830522  T
Q  152 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19830523 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 19830586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 19590527 - 19590691
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  19590527 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 19590626  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19590627 catttttcatcctaccccccattttattctccaaaaacccagagaaatgacagttttagacctac 19590691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 32005157 - 32004993
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  32005157 cttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcatttttgttg 32005058  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  32005057 catttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctac 32004993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 39 - 215
Target Start/End: Original strand, 38858633 - 38858809
Alignment:
Q  39 gtaaaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaatta 138  Q
    ||||||| ||| |||||| ||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||| | |||||||||||| ||||||||    
T  38858633 gtaaaataaaggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaatta 38858732  T
Q  139 tcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38858733 tcatttttgttgcatttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 38858809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 52 - 213
Target Start/End: Original strand, 4641443 - 4641604
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||| |||||||||||||| |||||||||||||||||||||    
T  4641443 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatcatttttgttgc 4641542  T
Q  152 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacct 213  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  4641543 atttttcgtcctaccccccattttattctccaaaaatgcagagaaatgatagttttagacct 4641604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 52 - 215
Target Start/End: Complemental strand, 29100393 - 29100230
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||| | |||||||||||| |||||||||||||||||||||    
T  29100393 ttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 29100294  T
Q  152 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29100293 attttttgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctac 29100230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 34534334 - 34534170
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||| ||||||||| ||||||||||||  |||||||||||||| |||||||| ||||||| | |||||||||||||||||||||||||||||||||    
T  34534334 cttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcatttttgttg 34534235  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  34534234 catttttcgtcctaccccccattttattctccaaaaaaacagagaaatgacagttttagacctac 34534170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 35289444 - 35289280
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||    
T  35289444 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttggttg 35289345  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||| | ||||||||||||||    
T  35289344 catttttcgtcataccccccattttattctctaaaaacgcagagaaataatagttttagacctac 35289280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 2659383 - 2659219
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||| |||||||||||| |||||||  || ||| |||||||||| ||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  2659383 cttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 2659284  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2659283 catttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 2659219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 55 - 211
Target Start/End: Complemental strand, 23953268 - 23953112
Alignment:
Q  55 attacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatt 154  Q
    |||||| ||||||||||||||||||| | |||||||||||||||||| ||||||| |||| | |||||||||||||||||||||||||||||||||||||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 23953169  T
Q  155 tttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagac 211  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23953168 tttcgtcataccccccattttattctccaaaaacgcagagaaataacagttttagac 23953112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 19591068 - 19590909
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  19591068 cttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 19590969  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  19590968 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 19590909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 51 - 209
Target Start/End: Original strand, 2658841 - 2659000
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  2658841 cttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 2658940  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    ||||||||||| |||| || ||||| |  ||||||||||||||||||||| |||||||||    
T  2658941 catttttcgtcatacctcctattttcaaactccaaaaacgcagagaaatggcagttttag 2659000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 52 - 215
Target Start/End: Complemental strand, 4478242 - 4478079
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    |||| |||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||| | || || |  |||||||||||||||||||||||||    
T  4478242 ttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcatttttgttgc 4478143  T
Q  152 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||| || ||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  4478142 atttttcgtcttatccctcattttattctccaaaaacgcagagaaataacagttttagacctac 4478079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 38859184 - 38859025
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||| | |||||||||||||||| ||||||||||||||||    
T  38859184 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttgttg 38859085  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||| || ||||| |  ||||| |||||||||||||||| ||||||||    
T  38859084 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 38859025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 51 - 208
Target Start/End: Original strand, 32004616 - 32004774
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||| || |||||||||||||||| | ||||||| |||||||||||||||||||||||||    
T  32004616 cttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttg 32004715  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 208  Q
    ||||||||| |||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  32004716 catttttcgccctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 32004774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 51 - 207
Target Start/End: Complemental strand, 37787310 - 37787153
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||| ||||||||||||||||||||||  ||||||||||||||||||||| ||||||||  | ||||||||||| |||||||||||||||||||||    
T  37787310 cttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaattatcatttttgttg 37787211  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttt 207  Q
    |||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||    
T  37787210 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttt 37787153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 19830962 - 19830804
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||    
T  19830962 cttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcatttttgttg 19830863  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    ||||||| |||||||| || ||||| |  ||||| |||| ||||||||||||||||||||    
T  19830862 cattttt-gtcctacctcctattttcaaactccagaaacacagagaaatgacagttttag 19830804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 51 - 187
Target Start/End: Original strand, 28583441 - 28583577
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  |||||| || | |||| |||||||||||||| |||| ||||| |||||||||||||||||||| |||    
T  28583441 cttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatcatttttattg 28583540  T
Q  151 catttttcgtcctaccccccattttattctccaaaaa 187  Q
    ||||||||||||||||||||||||||| |||||||||    
T  28583541 catttttcgtcctaccccccattttatcctccaaaaa 28583577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 51 - 209
Target Start/End: Original strand, 34533793 - 34533952
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| ||| ||||||||| | || |||| |||| ||||||||||||||||||||    
T  34533793 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcatttttgttg 34533892  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||| ||||||||| || ||||| |  |||||||||||||||||||||||| ||||||    
T  34533893 cattttccgtcctacctcctattttcaaactccaaaaacgcagagaaatgacacttttag 34533952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 51 - 208
Target Start/End: Original strand, 35288905 - 35289063
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||||||| |||| ||||||  ||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||    
T  35288905 cttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttg 35289004  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 208  Q
    |||||||||||||||  |  ||||| |  ||||| |||| |||||||||||||||||||    
T  35289005 catttttcgtcctacttcatattttcaaactccagaaacacagagaaatgacagtttta 35289063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 62 - 209
Target Start/End: Original strand, 29099863 - 29100011
Alignment:
Q  62 ttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttttcgtc 161  Q
    ||||||||||||||||||||  |||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  29099863 ttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 29099962  T
Q  162 ctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    ||||| || ||||| |  | ||| ||||| ||| |||||||||||||||    
T  29099963 ctacctcctattttcaaaccccagaaacgtagataaatgacagttttag 29100011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 51 - 191
Target Start/End: Original strand, 38160953 - 38161093
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||||||||||| |||||||  ||||||||||| |  |||||||||||||||| | |||||||  ||||||||||||| ||||||||||    
T  38160953 cttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattatttttgttg 38161052  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgca 191  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  38161053 catttttcgtcctactccccattttatcctccaaaaacgca 38161093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 52 - 209
Target Start/End: Complemental strand, 4641983 - 4641828
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||||||||||||||||||||||||  |||||||   |||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4641887  T
Q  152 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    || |||||||||||  || ||||| |  ||| | |||||||||||||||||||||||||    
T  4641886 atatttcgtcctacgtcctattttcaaactctagaaacgcagagaaatgacagttttag 4641828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 51 - 209
Target Start/End: Original strand, 23952732 - 23952892
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtt-tactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgtt 149  Q
    ||||||||||||||||||||||||||||||    ||||||||||| ||||| ||||||||||||| | |||||||||||||||||||||||||||| |||    
T  23952732 cttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttggtt 23952831  T
Q  150 gcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||||  | ||||| |  | ||| |||||||||||||||| ||||||||    
T  23952832 gcatttttcgtcctaccttctattttcaaaccccagaaacgcagagaaatgatagttttag 23952892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 28584465 - 28584326
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||| ||||||||| |||||  || |||||||| ||||| || |||||||||| | |||||||  ||||||||||||||||||||||||    
T  28584465 cttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcatttttgttg 28584366  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgc 190  Q
     |||||||||| ||||||||||||||| ||||||||||||    
T  28584365 tatttttcgtcttaccccccattttatcctccaaaaacgc 28584326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 32427432 - 32427400
Alignment:
Q  183 aaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||||||||||||    
T  32427432 aaaaacgcagagaaatgacagttttagacctac 32427400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 208
Target Start/End: Original strand, 9393734 - 9393894
Alignment:
Q  47 aagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcattttt 146  Q
    |||||||||||||||||||| ||||||  ||||| |   ||||||||| | ||| ||||  ||| ||||  |||||||| |||| | || |||||| |||    
T  9393734 aagacttaattacacttttgatcctcgcattttgatcagctcacgaaaattgtcttgcctctttcaaatcgaacaaaaccgtcc-taaactatcatgttt 9393832  T
Q  147 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagtttta 208  Q
     ||||  |||| |||||||| || |||||   ||||| |||| ||| |||||||||||||||    
T  9393833 tttgctgttttagtcctacctcctattttcaactccagaaacacagtgaaatgacagtttta 9393894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 34594576 - 34594628
Alignment:
Q  42 aaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaa 94  Q
    |||| |||||||||||||||||||||||||||  |||||  | ||||||||||    
T  34594576 aaataaagacttaattacacttttggtcctcgcattttgactaactcacgaaa 34594628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 148; Significance: 3e-78; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 51 - 214
Target Start/End: Original strand, 18984121 - 18984284
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  18984121 cttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 18984220  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagaccta 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  18984221 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgatagttttagaccta 18984284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 50970821 - 50970657
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  50970821 cttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 50970722  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50970721 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 50970657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 5540361 - 5540197
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||| | || ||||||||||||||||||||||||||||||    
T  5540361 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcatttttgttg 5540262  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5540261 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 5540197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 43 - 215
Target Start/End: Complemental strand, 15646746 - 15646574
Alignment:
Q  43 aattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcat 142  Q
    ||||||| |||||||||||||||||||||||||||||||  |||||||||||||| |||| ||||||||||| | |||||||||||||||||||||||||    
T  15646746 aattaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcat 15646647  T
Q  143 ttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15646646 ttttgttgcatttttcgtcctacccccaattttattctccaaaaacgcagagaaatgacagttttagacctac 15646574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 52 - 215
Target Start/End: Original strand, 15173099 - 15173262
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||  ||||||||||| ||||||||||||||||||||||    
T  15173099 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcatttttgttgc 15173198  T
Q  152 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15173199 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 15173262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 41 - 215
Target Start/End: Original strand, 29869612 - 29869786
Alignment:
Q  41 aaaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatc 140  Q
    |||| |||| |||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||     
T  29869612 aaaaataaggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatt 29869711  T
Q  141 atttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29869712 atttttgttgcatttttcgtcctacaccccattttattctccaaaaacgcagagaaatgacagttttagacctac 29869786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 49 - 215
Target Start/End: Complemental strand, 33144464 - 33144298
Alignment:
Q  49 gacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgt 148  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | ||||||| || ||||||| ||||||||||||    
T  33144464 gacttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcatttttgt 33144365  T
Q  149 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33144364 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 33144298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 29306955 - 29307119
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||| ||||||||||||||  ||||||||||||||||| || |||||||||| | |||||||||||||||||||||||||||||||||    
T  29306955 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 29307054  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29307055 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 29307119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 52 - 215
Target Start/End: Complemental strand, 5963120 - 5962957
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||||||||||||||||||||||||  |||||||||||||| || ||||||||||||||| |||||||| ||| |||||||||||||||||||||    
T  5963120 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcatttttgttgc 5963021  T
Q  152 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5963020 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 5962957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 21856586 - 21856422
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  |||||| ||||||| ||||||| |||||||| | |||||||||||||||||| ||||||||||| ||    
T  21856586 cttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgctg 21856487  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21856486 catttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctac 21856422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 8679084 - 8678921
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||| | ||||||| |||| ||||||||||||||||||||    
T  8679084 cttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatcatttttgttg 8678985  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||    
T  8678984 catttttcgtccta-cctccattttattctccaaaaatgcagagaaatgacagttttagacctac 8678921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 48 - 212
Target Start/End: Original strand, 39154018 - 39154182
Alignment:
Q  48 agacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttg 147  Q
    |||||||||||||||||||||| || ||||||||  |||||||||||||| || ||||||||||||| | |||||||||||||| |||||||||||||||    
T  39154018 agacttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcatttttg 39154117  T
Q  148 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacc 212  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  39154118 ttgcatttttcgtcctaccccccattctattctccaaaaacgcatagaaatgacagttttagacc 39154182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 51 - 214
Target Start/End: Original strand, 17433218 - 17433381
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||| ||||||||  |||||| |||||||  | ||||||||||||| | |||||||||||||||||| ||||||||||||||    
T  17433218 cttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttg 17433317  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagaccta 214  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17433318 catttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagaccta 17433381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 9018975 - 9019139
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  |||| ||||||||||| |||||||||||||| | |||||||||||| ||||| ||||||||||||||    
T  9018975 cttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatcatttttgttg 9019074  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||| ||||    
T  9019075 catttttcgtcctaccccccattttattctccaaaaacgcagagaaattatatttttagatctac 9019139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 26859602 - 26859439
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||| ||||||||||||||  |||||||||||||  |||||||||||||||| | ||||| |||||||||||||||||||||||||||    
T  26859602 cttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcatttttgttg 26859503  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||    
T  26859502 catttttcgtcctacccccca-tttattctccaaaaacgcagagaaataatagttttagacctac 26859439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 29307485 - 29307320
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||| ||||||||||||||||||||||   ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  29307485 cttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 29307386  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||||||||    
T  29307385 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctac 29307320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 48 - 209
Target Start/End: Original strand, 21856041 - 21856203
Alignment:
Q  48 agacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttg 147  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  21856041 agacttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 21856140  T
Q  148 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    ||||||||||| ||||| | || ||||| |  ||||| |||||||||||||||||||||||||    
T  21856141 ttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 21856203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 48 - 211
Target Start/End: Complemental strand, 17433761 - 17433597
Alignment:
Q  48 agacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttg 147  Q
    |||||||||||||||||||||||||||||| |||  ||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||    
T  17433761 agacttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 17433662  T
Q  148 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 211  Q
    ||||||||||||||||||| || ||||| |  || || |||||||||||||||||||||||||||    
T  17433661 ttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacagttttagac 17433597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 51 - 209
Target Start/End: Original strand, 8678543 - 8678702
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  8678543 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttg 8678642  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    ||||||||||||||||  | ||||| |  || || ||||||| |||||||||||||||||    
T  8678643 catttttcgtcctacctgctattttcaaacttcagaaacgcaaagaaatgacagttttag 8678702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 39154563 - 39154404
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||    
T  39154563 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttgttg 39154464  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||| || ||||| |  || || |||||||||||||||||| ||||||    
T  39154463 catttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacaattttag 39154404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 51 - 207
Target Start/End: Original strand, 50970280 - 50970437
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||  | |||||||||||||||||||||||||||||||||    
T  50970280 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcatttttgttg 50970379  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttt 207  Q
    ||||||||||||||||  | ||||| |  ||||| |||||||||||||||||||||||    
T  50970380 catttttcgtcctaccttctattttcaaactccagaaacgcagagaaatgacagtttt 50970437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 51 - 209
Target Start/End: Original strand, 5539818 - 5539977
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  5539818 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 5539917  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
     ||||||||||||||| || ||||| |  ||||| ||||||| ||||||| |||||||||    
T  5539918 tatttttcgtcctacctcctattttcaaactccataaacgcatagaaatggcagttttag 5539977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 29870162 - 29870003
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  |||||| ||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||    
T  29870162 cttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttg 29870063  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||| || ||||| |  ||  | |||||||||||||||||||||||||    
T  29870062 catttttcgtcctacctcctattttcaaactttagaaacgcagagaaatgacagttttag 29870003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 51 - 208
Target Start/End: Complemental strand, 4636514 - 4636356
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||| | ||||||||| |||||||||||||||||||||||    
T  4636514 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgttg 4636415  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 208  Q
    |||||||||||| ||| || ||||| |  ||||| |||||||||||||||||| |||||    
T  4636414 catttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaatttta 4636356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 18984668 - 18984503
Alignment:
Q  45 ttaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcattt 144  Q
    ||||| ||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||    
T  18984668 ttaaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 18984569  T
Q  145 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||||||||| || ||||| |  ||| | |||| |||||||||| |||||||||    
T  18984568 ttgttgcatttttcgtcctacctcctattttcaaactctagaaacacagagaaatggcagttttag 18984503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 57 - 209
Target Start/End: Original strand, 33143925 - 33144078
Alignment:
Q  57 tacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttt 156  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||| ||    
T  33143925 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttttttgcatatt 33144024  T
Q  157 tcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||| || ||||| |  ||| | |||||||||||||||||||||||||    
T  33144025 tcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 33144078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 15173636 - 15173478
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||||||||| |||||||| | ||||||| |||||||||||||||||||||||||    
T  15173636 cttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcc-ttttaaaacagaacaaaatggtccttcaattatcatttttgttg 15173538  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||| || ||||| |  ||| | |||||||||||||||||||||||||    
T  15173537 catttttcgtcctacctcctattttcaaactctataaacgcagagaaatgacagttttag 15173478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 51 - 213
Target Start/End: Complemental strand, 9019506 - 9019343
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||||||||||||||||||   ||||||| |||||||| ||||| |||||||| | |||||||||||| ||||||||||||||||||||    
T  9019506 cttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcatttttgttg 9019407  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagacct 213  Q
    |||||||||||||||| || ||||| |  | ||| |||||||||||||| ||||||||||||||    
T  9019406 catttttcgtcctacctcctattttcaaaccccagaaacgcagagaaataacagttttagacct 9019343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 51 - 209
Target Start/End: Original strand, 15646194 - 15646353
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||| ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| | ||||||| ||| |||||||||||||||||||||    
T  15646194 cttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatcatttttgttg 15646293  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||| |  ||||| |  ||||| ||| |||||||||||||||||||||    
T  15646294 catttttcgtcctacctcatattttcaaactccataaatgcagagaaatgacagttttag 15646353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 52268285 - 52268430
Alignment:
Q  44 attaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatt 143  Q
    |||||| |||||||||||||||||||||||| ||||||  | ||||||||| ||||||||||||||||||| | |||||||| ||| |||| ||||||||    
T  52268285 attaaggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcatt 52268384  T
Q  144 tttgttgcatttttcgtcctaccccccattttattctccaaaaacg 189  Q
    ||||||||| |||||||||||||||||||||| | |||||||||||    
T  52268385 tttgttgcacttttcgtcctaccccccattttttcctccaaaaacg 52268430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 51 - 166
Target Start/End: Original strand, 26859061 - 26859176
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||||||||| |||||||||  |||| ||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||    
T  26859061 cttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttg 26859160  T
Q  151 catttttcgtcctacc 166  Q
    ||||||||||||||||    
T  26859161 catttttcgtcctacc 26859176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 51 - 209
Target Start/End: Original strand, 5962580 - 5962739
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||| |||||||||||||||| |||| || ||||||||||||||| |||||||||||| | |||||||||||| ||||| ||||||||||||||    
T  5962580 cttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatcatttttgttg 5962679  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||| ||||| || ||||| |  ||||| |||| ||||| ||||||||||||||    
T  5962680 catttttcgttctacctcctattttcaaactccagaaacacagagtaatgacagttttag 5962739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 122 - 215
Target Start/End: Original strand, 4636045 - 4636138
Alignment:
Q  122 aaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4636045 aaacggtccttcaagtatcatttttgttgcattttttgttctaccccccattttattcttcaaaaacgcagagaaatgacagttttagacctac 4636138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 48 - 165
Target Start/End: Complemental strand, 52269294 - 52269177
Alignment:
Q  48 agacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttg 147  Q
    |||||||||||||||||||||||||||||||||  ||||||| ||||  ||| |||||||||||||| | |||||||  ||| |||| ||||||||||||    
T  52269294 agacttaattacacttttggtcctcgtgttttgacttactcatgaaatcggttctgcccttttaaaacagaacaaaaatgtcattcagttatcatttttg 52269195  T
Q  148 ttgcatttttcgtcctac 165  Q
    ||||| ||||||||||||    
T  52269194 ttgcacttttcgtcctac 52269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 51 - 209
Target Start/End: Original strand, 17112284 - 17112442
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||| ||| ||||||| | |||||| |||| ||||   |||||||||||||| || ||||  |||||||||||||||||||| |||    
T  17112284 cttaattacacttttggttctcatgttttgatctactcatgaaattggtag-gcccttttaaaatagaataaaatagtccttcaattatcatttttattg 17112382  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||| || ||||| |  ||||| ||||||||| |||||| ||||||||    
T  17112383 catttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgatagttttag 17112442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 47826956 - 47827039
Alignment:
Q  41 aaaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaa 124  Q
    |||| ||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||    
T  47826956 aaaaataatacttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaatataacaaaa 47827039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 51 - 135
Target Start/End: Complemental strand, 2733500 - 2733416
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaa 135  Q
    |||||||| |||||||||||| |||||||||  || || ||||| ||||||||||||||||||| | ||||||||||||||||||    
T  2733500 cttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 149
Target Start/End: Complemental strand, 47827125 - 47827033
Alignment:
Q  57 tacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgtt 149  Q
    |||||||||| ||  | ||||||||  ||||||||||| ||||| ||||||||||||| | |||||||  |||||| ||||||||||||||||    
T  47827125 tacacttttgatctccttgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcctttaattatcatttttgtt 47827033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 39843193 - 39843280
Alignment:
Q  89 acgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttta 176  Q
    ||||||||||||||||| |||| ||||  ||||||||||||| |  | |||||| ||| ||||| |||| |||||  |||||||||||    
T  39843193 acgaaactggtcctgcctttttcaaatcgaacaaaacggtccctatactatcatgttttttgcacttttggtccttacccccatttta 39843280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 215
Target Start/End: Complemental strand, 17088550 - 17088520
Alignment:
Q  185 aaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||||||||||    
T  17088550 aaacgcagagaaatgacagttttagacctac 17088520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 50419770 - 50419725
Alignment:
Q  85 actcacgaaactggtcctgcccttttaaaatataacaaaacggtcc 130  Q
    |||||||||| |||||||||| |||||||||  |||||||||||||    
T  50419770 actcacgaaattggtcctgcctttttaaaattgaacaaaacggtcc 50419725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 52235178 - 52235074
Alignment:
Q  85 actcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaa 184  Q
    ||||||||||||| |||||||||||| ||||  ||| || | |||| |  | |||||| ||| ||||| |||| |||||| ||| |||||||  ||||||    
T  52235178 actcacgaaactgatcctgcccttttcaaatcgaacgaagcagtccctatactatcatgtttcttgcaattttggtcctaaccctcattttaccctccaa 52235079  T
Q  185 aaacg 189  Q
    |||||    
T  52235078 aaacg 52235074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 147; Significance: 1e-77; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 45 - 215
Target Start/End: Original strand, 33109680 - 33109850
Alignment:
Q  45 ttaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcattt 144  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||    
T  33109680 ttaagacttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcattt 33109779  T
Q  145 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33109780 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 33109850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 48 - 215
Target Start/End: Complemental strand, 38962365 - 38962198
Alignment:
Q  48 agacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttg 147  Q
    ||||||||||||| ||||||||||||||||||||| || ||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||    
T  38962365 agacttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttg 38962266  T
Q  148 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38962265 ttgcatttttcgtcctaccccccattttattcttcaaaaacgcagagaaatgacagttttagacctac 38962198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 40 - 214
Target Start/End: Original strand, 4219548 - 4219722
Alignment:
Q  40 taaaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattat 139  Q
    |||||| | |||||||||||| ||||||||||||||||||||  |||||||||||||||||||||| |||||||||| |||||||| |||||||||||||    
T  4219548 taaaatgatgacttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattat 4219647  T
Q  140 catttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagaccta 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4219648 catttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaaaccta 4219722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 47 - 215
Target Start/End: Complemental strand, 46193952 - 46193784
Alignment:
Q  47 aagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcattttt 146  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  46193952 aagacttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 46193853  T
Q  147 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
     |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  46193852 attgcatttttcgtcctaccccccattttattctccaaaaacgtagagaattgacagttttagacctac 46193784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 46 - 215
Target Start/End: Complemental strand, 15523782 - 15523613
Alignment:
Q  46 taagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttt 145  Q
    |||| ||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| | ||||||| |||||||||| |||||||||    
T  15523782 taaggcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcatttt 15523683  T
Q  146 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15523682 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagacctac 15523613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 12234331 - 12234495
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  12234331 cttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 12234430  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  12234431 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttaaacctac 12234495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 47 - 215
Target Start/End: Original strand, 23494441 - 23494609
Alignment:
Q  47 aagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcattttt 146  Q
    |||||||||||||| ||||||||||||||||||||  ||||||||||||| ||||||||||||||||| | |||||| ||||||||||||||||||||||    
T  23494441 aagacttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcattttt 23494540  T
Q  147 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
     |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23494541 attgcatttttcgtcctaccccccattttattctccaaacacgcagagaaatgacagttttagacctac 23494609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 25447779 - 25447615
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  25447779 cttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttg 25447680  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  25447679 catttttcgtcctaccctccattttattctccaaaaacgcagagaaattacagttttagacctac 25447615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 51 - 211
Target Start/End: Complemental strand, 11153690 - 11153530
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||| | ||||||||| |||||||||||||||||||||||    
T  11153690 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcatttttgttg 11153591  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagac 211  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  11153590 catttttcgtcctaccctccattttattctccaaaaacgcagagaaataacagttttagac 11153530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 25937672 - 25937836
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||| |||||||||||||||||| |  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  25937672 cttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 25937771  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25937772 cattttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctac 25937836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 51020799 - 51020963
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||| ||||| |||||||| | | |||| ||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||    
T  51020799 cttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgttg 51020898  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  51020899 catttttcgtcctaccccccattttattcttcaaaaacgtagagaaatgacagttttagacctac 51020963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 52 - 215
Target Start/End: Complemental strand, 22434718 - 22434557
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||| ||||||||||||||||||||  |||||||||||||||||||||| |||||||  | |||||||||||| |||||||||||||||||||||    
T  22434718 ttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaac-agaacaaaacggtcattcaattatcatttttgttgc 22434620  T
Q  152 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22434619 atttttcgtcctaccccc-attttattctccaaaaacgcagagaaatgacagttttagacctac 22434557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 51 - 211
Target Start/End: Complemental strand, 22170479 - 22170320
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||||||||||||||||||   |||| |||||| || ||||||| |||||||| | |||||||||||| ||||||||||||||||||||    
T  22170479 cttaattacacttttggtcctcgtgttttgacctactgacgaaattg-tcctgcctttttaaaacaaaacaaaacggtcattcaattatcatttttgttg 22170381  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagac 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22170380 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagac 22170320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 52 - 215
Target Start/End: Original strand, 45082435 - 45082596
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    |||||||| ||||||||| |||||||||||| |||||||||| |||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45082435 ttaattacgcttttggtcatcgtgttttggtctactcacgaa-ctggttttgcccttttaaaatagaacaaaacggtccttcaattatcatttttgttgc 45082533  T
Q  152 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  45082534 atttttcgtccta-cccccattttattctccaaaaacacagagaaatgacaattttagacctac 45082596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 52 - 215
Target Start/End: Complemental strand, 54995609 - 54995447
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||||||||||||||||||||||||  |||||||||||||| || ||||||||||||||| |||||||||||||||||| ||||| |||||||||    
T  54995609 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatca-ttttgttgc 54995511  T
Q  152 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||| |||||||||||||||| ||||||||| |||||||| ||||||||||||||    
T  54995510 atttttcgtcctaacccccattttattctctaaaaacgcaaagaaatgatagttttagacctac 54995447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 48526198 - 48526361
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||| |||||||||||   |||||| ||||||||  |||||||||||||| | |||||||||||||||||||||||||||||||||    
T  48526198 cttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 48526297  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  48526298 catttttcgtccta-cccccattttattctccaaaaatgcagagaaatgacagttttagatctac 48526361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 52 - 215
Target Start/End: Complemental strand, 2118837 - 2118675
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    |||||||||||||||||| |||||||||||  | |||| ||||||||||||  |||||||||| |||||||||||||| |||||||||||||||||||||    
T  2118837 ttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcatttttgttgc 2118738  T
Q  152 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||    
T  2118737 atttttcgtcctac-ccccattttattctccaaaaacgcagagaaataatagttttagacctac 2118675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 51 - 209
Target Start/End: Original strand, 22434181 - 22434340
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  22434181 cttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 22434280  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
     ||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  22434281 tatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 22434340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 45082967 - 45082808
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  45082967 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 45082868  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||| || ||||| |  ||| | |||||||||||||||||||||||||    
T  45082867 catttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 45082808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 51 - 211
Target Start/End: Original strand, 46193407 - 46193568
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||| | ||||||| |||||||||||||||||||||||||    
T  46193407 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttgttg 46193506  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 211  Q
    |||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||||    
T  46193507 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagac 46193568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 51 - 209
Target Start/End: Original strand, 25447249 - 25447408
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  25447249 cttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 25447348  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||| || ||||| |  ||||| |||||||||||||||||| ||||||    
T  25447349 catttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacaattttag 25447408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 51 - 208
Target Start/End: Original strand, 15523237 - 15523395
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||| |||    
T  15523237 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattattttttttg 15523336  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 208  Q
    |||||||||||||||| || ||||| |  ||| | ||||||||||||||||||||||||    
T  15523337 catttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagtttta 15523395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 52 - 209
Target Start/End: Complemental strand, 48526723 - 48526565
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||| |||||||||    
T  48526723 ttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcacttttgttgc 48526624  T
Q  152 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    ||||||||||||||| || ||||| |  ||||| |||| ||||||||||||||||||||    
T  48526623 atttttcgtcctacctcctattttcaaactccataaacacagagaaatgacagttttag 48526565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 51 - 165
Target Start/End: Complemental strand, 23494986 - 23494872
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  23494986 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 23494887  T
Q  151 catttttcgtcctac 165  Q
    |||||||||||||||    
T  23494886 catttttcgtcctac 23494872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 2118291 - 2118454
Alignment:
Q  47 aagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcattttt 146  Q
    ||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||||||||||    
T  2118291 aagacttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatcattttt 2118390  T
Q  147 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||||||| || ||||| |  || || ||||||||||||||  |||||||||    
T  2118391 gttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaattgcagttttag 2118454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 51 - 209
Target Start/End: Original strand, 11153148 - 11153307
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||| ||||||||||||||||||||||  ||||||| ||| ||||| ||||||||||||||| || ||||||||||||||||||||||||||||||    
T  11153148 cttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgttg 11153247  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||| || ||||| |  | ||| |||||||||||||||||||||||||    
T  11153248 catttttcgtcctacctcctattttcaaaccccagaaacgcagagaaatgacagttttag 11153307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 12234872 - 12234713
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||| ||||||||||||||||||||||  |||||||||||||| || ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  12234872 cttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 12234773  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||| || ||||| |  | ||| ||| |||||||||||||||||||||    
T  12234772 catttttcgtcctacctcctattttcaaaccccagaaatgcagagaaatgacagttttag 12234713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 20471054 - 20470895
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  |||| |||||||||||| | ||||||||||| | |||||||||||| ||||||||||||||||||||    
T  20471054 cttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 20470955  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||| || ||||| |  ||||| |||||||||||||||| ||||||||    
T  20470954 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 20470895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 52 - 209
Target Start/End: Complemental strand, 4220101 - 4219943
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||||||||||||||||||||||||  |||||||||||||| |||||| ||||||||| | ||||||| |||| |||||||||||||||||||||    
T  4220101 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcatttttgttgc 4220002  T
Q  152 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    ||||||||||||||| || ||||| |  || ||||||||||||||||| ||||||||||    
T  4220001 atttttcgtcctacctcctattttcaaacttcaaaaacgcagagaaataacagttttag 4219943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 52 - 209
Target Start/End: Original strand, 54995072 - 54995230
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||||||||||||||||||| ||||  ||||||||||||| ||||| ||||||||||| | ||||||||||||||||||||||||||||||||||    
T  54995072 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 54995171  T
Q  152 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    ||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  54995172 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 54995230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 51 - 175
Target Start/End: Complemental strand, 33110007 - 33109883
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||| ||||||||  | ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33110007 cttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttg 33109908  T
Q  151 catttttcgtcctaccccccatttt 175  Q
    |||||||||||||||| || |||||    
T  33109907 catttttcgtcctacctcctatttt 33109883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 118 - 215
Target Start/End: Complemental strand, 12503912 - 12503815
Alignment:
Q  118 aacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12503912 aacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 12503815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 40 - 208
Target Start/End: Complemental strand, 25938225 - 25938056
Alignment:
Q  40 taaaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattat 139  Q
    |||||| ||| ||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||| | |||||||| |||||||||||||    
T  25938225 taaaataaaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattat 25938126  T
Q  140 catttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 208  Q
    |||||||||||||||||| |||||||| || ||||| |  ||||| |||| || ||||||| ||||||||    
T  25938125 catttttgttgcattttttgtcctacctcctattttcaaactccagaaacacaaagaaatggcagtttta 25938056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 51021338 - 51021180
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||| ||||||||||||||  ||||||||||| ||||||||||||||||||| | ||||||||||||||| |||||||| ||||||||    
T  51021338 cttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatca-ttttgttg 51021240  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||| || ||||| |  ||||| ||||||||||||||| || ||||||    
T  51021239 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcaattttag 51021180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 52 - 209
Target Start/End: Original strand, 18751602 - 18751760
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||||||||||||||||||||||||  ||||||  ||||||||| ||||||||||||| | |||||||||||||||||| |||||||||||||||    
T  18751602 ttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcatttttgttgc 18751701  T
Q  152 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    ||||||||||| ||| || ||||| |  ||||| ||||||||| ||||| |||||||||    
T  18751702 atttttcgtcccacctcctattttcaaactccagaaacgcagaaaaatggcagttttag 18751760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 48293596 - 48293735
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||||||||||||||||||| |||||||||||| || ||||| |  ||||||| | |||||||  || |||||||||||||||||||||    
T  48293596 cttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcatttttgttg 48293695  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgc 190  Q
    |||||||| |||| ||| ||||||||||||||||||||||    
T  48293696 catttttcatcctgccctccattttattctccaaaaacgc 48293735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 51 - 191
Target Start/End: Complemental strand, 20958402 - 20958264
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||| |||||||| ||||||  ||||||||||| ||||||||||||||||||| | ||||||   ||||||||||||||||||||||||    
T  20958402 cttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcatttttgttg 20958303  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgca 191  Q
    ||||||| |||||| |||||||||||| |||||||||||||    
T  20958302 cattttt-gtccta-cccccattttatcctccaaaaacgca 20958264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 18764066 - 18763951
Alignment:
Q  48 agacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttg 147  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||| || |||||||||| | ||||||| |||| ||||| |||||||||||    
T  18764066 agacttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatcatttttg 18763967  T
Q  148 ttgcatttttcgtcct 163  Q
    ||||||||||||||||    
T  18763966 ttgcatttttcgtcct 18763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 52 - 185
Target Start/End: Original strand, 16690939 - 16691072
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||| |||||||||| |||||||| | ||||||||||| ||||||||||  ||||||| | |||||||   ||||||||||||||||||||||||    
T  16690939 ttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcatttttgttgc 16691038  T
Q  152 atttttcgtcctaccccccattttattctccaaa 185  Q
    |||||||||||||||||| ||||||| |||||||    
T  16691039 atttttcgtcctacccccgattttatcctccaaa 16691072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 66 - 209
Target Start/End: Original strand, 12503453 - 12503597
Alignment:
Q  66 ggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttttcgtcctac 165  Q
    |||||||||||||||  ||||||||||||||| ||| ||| |||||||| | |||||||  |||||||||||||||||||||||||||||||||||||||    
T  12503453 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 12503552  T
Q  166 cccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    | || ||||| |  ||||| |||||||||||||| ||||||||||    
T  12503553 ctcctattttcaaactccagaaacgcagagaaattacagttttag 12503597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 44892691 - 44892552
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||| | |||||||||||||||||||   ||||||||||| |||| ||||| |||||||| | |||||||| ||| |||||||||  |||||||||    
T  44892691 cttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattatattttttgttg 44892592  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgc 190  Q
    ||||||||||||||||| ||||||||| ||||||||||||    
T  44892591 catttttcgtcctaccctccattttatcctccaaaaacgc 44892552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 51 - 166
Target Start/End: Complemental strand, 35363144 - 35363028
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgccctttt-aaaatataacaaaacggtccttcaattatcatttttgtt 149  Q
    |||||||||||||||| ||||||||||||||  |||||||||||||||| |||| ||||| |||| | |||||||||||| |||||||||||||||||||    
T  35363144 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaattatcatttttgtt 35363045  T
Q  150 gcatttttcgtcctacc 166  Q
    ||||||||||| |||||    
T  35363044 gcatttttcgttctacc 35363028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 48295086 - 48294946
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||| |||||||| |||||||||| | ||||||||||| ||||| ||||  ||||||| | |||||||  ||| ||||||||||||||||||||    
T  48295086 cttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcatttttgttg 48294987  T
Q  151 cattttt-cgtcctaccccccattttattctccaaaaacgc 190  Q
    ||||||| ||||||||||||||||||||  |||||||||||    
T  48294986 catttttccgtcctaccccccattttatcttccaaaaacgc 48294946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 56 - 187
Target Start/End: Original strand, 20957196 - 20957327
Alignment:
Q  56 ttacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcattt 155  Q
    ||||| |||||||||||| ||||||| |||||||||||| ||||| | | ||||||||| | |||||||  ||||||||||||||| |||||||||||||    
T  20957196 ttacatttttggtcctcgagttttggcttactcacgaaaatggtcatactcttttaaaacacaacaaaattgtccttcaattatcaattttgttgcattt 20957295  T
Q  156 ttcgtcctaccccccattttattctccaaaaa 187  Q
    |||||| ||| ||||||||||||||| |||||    
T  20957296 ttcgtcatactccccattttattctcaaaaaa 20957327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 67 - 190
Target Start/End: Complemental strand, 43243807 - 43243685
Alignment:
Q  67 gtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacc 166  Q
    |||||||||||||||  ||||||||||| ||||| ||||||||||||| | |||||||  || |||||||||||||||||||||||||||| |||||||     
T  43243807 gtcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgttcttcaattatcatttttgttgcattttttgtcctac- 43243709  T
Q  167 ccccattttattctccaaaaacgc 190  Q
    ||||||||||| ||||||||||||    
T  43243708 ccccattttatcctccaaaaacgc 43243685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 52 - 191
Target Start/End: Complemental strand, 48713888 - 48713749
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||||||||  | |||||||||| |  |||||| |||| ||||| ||| ||||||||| | |||||||  |||||||||||||||||||||||||    
T  48713888 ttaattacacttttaattctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcatttttgttgc 48713789  T
Q  152 atttttcgtcctaccccccattttattctccaaaaacgca 191  Q
    |||||||||||| ||| ||||||||| |||||||||||||    
T  48713788 atttttcgtcctcccctccattttatcctccaaaaacgca 48713749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 51 - 185
Target Start/End: Original strand, 48708297 - 48708431
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||||||||  |||||||||  ||  ||||||| || |||||||||||||||| | |||||||| ||||||||||||||||||||||||    
T  48708297 cttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaacacaacaaaactgtccttcaattatcatttttgttg 48708396  T
Q  151 catttttcgtcctaccccccattttattctccaaa 185  Q
    ||||| |  ||||||| | |||||||| |||||||    
T  48708397 catttataatcctaccactcattttatcctccaaa 48708431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 67 - 187
Target Start/End: Complemental strand, 43281317 - 43281198
Alignment:
Q  67 gtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacc 166  Q
    |||||||||||||||  ||||||||||| ||||| |||| |||||||| | |||||||  || |||||||||| ||||||||||||||||||||||||||    
T  43281317 gtcctcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattat-atttttgttgcatttttcgtcctacc 43281219  T
Q  167 ccccattttattctccaaaaa 187  Q
    ||||||||||| ||| |||||    
T  43281218 ccccattttatcctcaaaaaa 43281198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 44890519 - 44890658
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||| |||||||||| ||||||||   || |||||||| ||||| ||||||||||||| | |||||||   ||||| ||||||  |||||||||    
T  44890519 cttaattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaacaaaaatatcctttaattatattttttgttg 44890618  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgc 190  Q
    |||||||| || ||||||||||||||| ||| ||||||||    
T  44890619 catttttcatcataccccccattttatcctcaaaaaacgc 44890658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 185
Target Start/End: Complemental strand, 16691614 - 16691481
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||| |||  ||||||||   ||||||||||| ||||||||||  ||||||  |||||||||  |||||| |||||| ||||||||||    
T  16691614 cttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctgcctctttaaac-ataacaaaattgtcctttaattattatttttgttg 16691516  T
Q  151 catttttcgtcctaccccccattttattctccaaa 185  Q
    ||||||||||| |||| |||||||||| |||||||    
T  16691515 catttttcgtcatacctcccattttatcctccaaa 16691481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 10258435 - 10258306
Alignment:
Q  46 taagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttt 145  Q
    |||| ||||||||||||||||||||||||||| |||  |||||| |||| ||||||||||||||||||| | |  ||||  ||  |||||||||||||||    
T  10258435 taaggcttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacagattaaaattgtttttcaattatcatttt 10258336  T
Q  146 tgttgcatttttcgtcctaccccccatttt 175  Q
    ||||||| |||| ||| ||||||| |||||    
T  10258335 tgttgcagttttagtcttaccccctatttt 10258306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 107 - 190
Target Start/End: Original strand, 43242328 - 43242411
Alignment:
Q  107 ttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgc 190  Q
    |||||||| | |||||||||||| |||||||||||||||| ||||||||||||||||||| || |||||||  |||||||||||    
T  43242328 ttttaaaacagaacaaaacggtcattcaattatcattttttttgcatttttcgtcctacctccaattttatcatccaaaaacgc 43242411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 16318319 - 16318256
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaa 114  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||| ||||||||||||||||    
T  16318319 cttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaa 16318256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 18752038 - 18751981
Alignment:
Q  158 cgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||    
T  18752038 cgtcctaccccctattttattctccaaaaatgcagagaaataacagttttagacctac 18751981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 215
Target Start/End: Original strand, 17503967 - 17504139
Alignment:
Q  42 aaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatca 141  Q
    |||||||| |||||||| ||| ||||||||||  |||||     ||||||||| ||||||||||  ||| ||||  |||| ||| |||||  || |||||    
T  17503967 aaattaaggcttaattatactgttggtcctcgcattttgaccatctcacgaaaatggtcctgcctctttcaaatggaacataaccgtccta-aactatca 17504065  T
Q  142 tttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    | ||| ||||| |||| |||||||| || |||||   ||||| ||||| |||||||||||||||||||||||||    
T  17504066 tgttttttgcagttttagtcctacctcctattttcaactccagaaacgtagagaaatgacagttttagacctac 17504139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 44220853 - 44220781
Alignment:
Q  118 aacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgc 190  Q
    |||||||  |||||||| |||||||||||||| |||||||||| |||||||  ||||||| ||||||||||||    
T  44220853 aacaaaattgtccttcatttatcatttttgtttcatttttcgttctacccctaattttatcctccaaaaacgc 44220781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 51 - 157
Target Start/End: Original strand, 55189530 - 55189636
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||| | ||||| |||||||||||||   || |||  ||| ||||  ||||||||||||||| |||||||  ||| ||||||||||||||||| |     
T  55189530 cttaattatatttttgatcctcgtgttttgacctattcataaaaatggttatgcccttttaaaatagaacaaaattgtctttcaattatcatttttgcta 55189629  T
Q  151 cattttt 157  Q
    |||||||    
T  55189630 cattttt 55189636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 215
Target Start/End: Complemental strand, 17504369 - 17504339
Alignment:
Q  185 aaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||||||||||    
T  17504369 aaacgcagagaaatgacagttttagacctac 17504339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 215
Target Start/End: Original strand, 35193443 - 35193473
Alignment:
Q  185 aaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||||||||||    
T  35193443 aaacgcagagaaatgacagttttagacctac 35193473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 131
Target Start/End: Complemental strand, 35193846 - 35193766
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtcct 131  Q
    ||||||||||||||||||||| |  ||||| |   ||||||||| ||||||||||  ||| |||| ||||||||| |||||    
T  35193846 cttaattacacttttggtccttgcattttgataagctcacgaaaatggtcctgcctctttcaaatctaacaaaaccgtcct 35193766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 146; Significance: 4e-77; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 37 - 214
Target Start/End: Original strand, 26538085 - 26538262
Alignment:
Q  37 ttgtaaaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaat 136  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| | |||||| ||||||||||||    
T  26538085 ttgtaaaattaaggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaat 26538184  T
Q  137 tatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagaccta 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  26538185 tatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaataacagttttagaccta 26538262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 52 - 215
Target Start/End: Original strand, 11090524 - 11090687
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  11090524 ttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 11090623  T
Q  152 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11090624 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 11090687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 52 - 215
Target Start/End: Original strand, 14432145 - 14432308
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14432145 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgttgc 14432244  T
Q  152 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14432245 atttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 14432308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 51 - 214
Target Start/End: Original strand, 239355 - 239517
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||||||| |||||||||||  |||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||    
T  239355 cttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgttg 239453  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagaccta 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  239454 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagaccta 239517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 51 - 214
Target Start/End: Original strand, 22374322 - 22374485
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  22374322 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 22374421  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagaccta 214  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  22374422 catttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgatagttttagaccta 22374485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 52 - 215
Target Start/End: Complemental strand, 40815887 - 40815724
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||  ||||||||||||| | |||||||||| |||||||||||||||||||||||    
T  40815887 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcatttttgttgc 40815788  T
Q  152 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40815787 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 40815724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 45 - 215
Target Start/End: Original strand, 40027136 - 40027306
Alignment:
Q  45 ttaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcattt 144  Q
    ||||| ||||||||||||||||||| |||||||||||  ||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||    
T  40027136 ttaaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 40027235  T
Q  145 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  40027236 ttgttgcattttttgtcctaccctccattttattctccaaaaacgcagagaaatgacagttttagacctac 40027306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 52 - 215
Target Start/End: Complemental strand, 8425902 - 8425739
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||||||||||| || |||||||||| ||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  8425902 ttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttgc 8425803  T
Q  152 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8425802 atttttcgtcttacccccaattttattctccaaaaacgcagagaaatgacagttttagacctac 8425739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 1978110 - 1978274
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||| |||||||||| |||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  1978110 cttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 1978209  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1978210 cattttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctac 1978274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 18451374 - 18451210
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||| | |||||||  ||||||||| ||||||||||||||    
T  18451374 cttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcatttttgttg 18451275  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18451274 catttttcttcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 18451210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 43058335 - 43058499
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||| ||||||||||||||   |||||| |||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||    
T  43058335 cttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttg 43058434  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  43058435 catttttcgttctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctac 43058499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 26538622 - 26538457
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||    
T  26538622 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcatttttgttg 26538523  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||||||||||||| |  | ||| |||||||||||||||||||||||||||||||    
T  26538522 catttttcgtcctaccccccattttcaaaccccagaaacgcagagaaatgacagttttagacctac 26538457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 28616615 - 28616780
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  28616615 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 28616714  T
Q  151 catttttcgtcctaccccccattttattctcc-aaaaacgcagagaaatgacagttttagacctac 215  Q
    || ||||||||||||||||||||||||| ||| ||||||||||||||||  |||||||||||||||    
T  28616715 caattttcgtcctaccccccattttattatccaaaaaacgcagagaaatagcagttttagacctac 28616780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 55 - 215
Target Start/End: Original strand, 3025472 - 3025631
Alignment:
Q  55 attacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatt 154  Q
    |||||| ||||||||||||||||||||  ||||||||||||||||||||| ||||||||| | |||||||||||||||||| ||||||||||||||||||    
T  3025472 attacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatt 3025571  T
Q  155 tttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  3025572 tttcgtccta-cccccattttattctcaaaaaacgcaaagaaatgacagttttagacctac 3025631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 7446889 - 7446730
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||| ||||| |||||||||||||  |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  7446889 cttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 7446790  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  7446789 catttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 7446730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 51 - 209
Target Start/End: Original strand, 40815347 - 40815506
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  40815347 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatcatttttgttg 40815446  T
Q  151 catttttcgtcctacccccca-ttttattctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||| || | |||||  ||||| |||||||||||||||||||||||||    
T  40815447 catttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttag 40815506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 51 - 205
Target Start/End: Original strand, 7446344 - 7446497
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||| ||||||||||||||| |||||| |||| ||||||||||||||||||| | |||||||||||| |||||||||||||||| |||    
T  7446344 cttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttattg 7446443  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagtt 205  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  7446444 catttttcgtcata-cccccattttattctccaaaaacgcagagaaatgacagtt 7446497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 20444751 - 20444890
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||    
T  20444751 cttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcatttttgttg 20444850  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgc 190  Q
    || |||||||||||||||||||||||| ||||||||||||    
T  20444851 cagttttcgtcctaccccccattttatcctccaaaaacgc 20444890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 51 - 209
Target Start/End: Original strand, 18450832 - 18450991
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||| |||    
T  18450832 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcattttttttg 18450931  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    ||||||| |||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  18450932 catttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 18450991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 48 - 191
Target Start/End: Original strand, 15551498 - 15551641
Alignment:
Q  48 agacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttg 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||| | |||||||  |||||||| ||||||||||||    
T  15551498 agacttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttg 15551597  T
Q  148 ttgcatttttcgtcctaccccccattttattctccaaaaacgca 191  Q
    ||||||||||||||| |||| ||||||||| |||||||||||||    
T  15551598 ttgcatttttcgtccaaccctccattttatcctccaaaaacgca 15551641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 22374868 - 22374709
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  22374868 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 22374769  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||| || ||||| |  ||| | ||| |||||||||||||||||||||    
T  22374768 catttttcgtcctacctcctattttcaaactctagaaatgcagagaaatgacagttttag 22374709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 52 - 209
Target Start/End: Complemental strand, 40027682 - 40027524
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||| | |||||||||||| |||||||||||||||||||||    
T  40027682 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 40027583  T
Q  152 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    ||||||||||||||| || ||||| |  ||||| |||||||| |||||| |||||||||    
T  40027582 atttttcgtcctacctcctattttcaaactccataaacgcagtgaaatggcagttttag 40027524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 51 - 166
Target Start/End: Complemental strand, 28847238 - 28847123
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||    
T  28847238 cttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattatcatttttgttg 28847139  T
Q  151 catttttcgtcctacc 166  Q
    ||||||||||||||||    
T  28847138 catttttcgtcctacc 28847123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 35779710 - 35779849
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||||||||||||||||||   ||||||||||| |||||||||| |||||||| | |||||||  ||||||||||||||||||||||||    
T  35779710 cttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatcatttttgttg 35779809  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgc 190  Q
    ||||||| ||||||||||||||||||| ||||||||||||    
T  35779810 cattttttgtcctaccccccattttatcctccaaaaacgc 35779849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 35781206 - 35781067
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||| ||||||||||||||  ||||||||||| ||||| ||||||||||||| | ||||||||  |||||||||||||||||||||||    
T  35781206 cttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgttg 35781107  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgc 190  Q
    |||||||||||||| |||||||||||| ||||||||||||    
T  35781106 catttttcgtcctaacccccattttatcctccaaaaacgc 35781067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 41 - 209
Target Start/End: Complemental strand, 28617167 - 28616998
Alignment:
Q  41 aaaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatc 140  Q
    ||||| ||| |||||||||||||||||||||||||||||||  |||||||||||||||| ||| |||||||||| | ||||||| |||||||||||||||    
T  28617167 aaaatgaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatc 28617068  T
Q  141 atttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    ||||||||||||||||||||| |||| || ||||| |  ||||| ||||||||||||||  |||||||||    
T  28617067 atttttgttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatagcagttttag 28616998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 239895 - 239736
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||| ||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||| | ||||||| |||||||||||||||||||||||||    
T  239895 cttagttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttg 239796  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    | ||||||||| |||| || ||||| |  ||||| ||||||||||||||| |||||||||    
T  239795 cgtttttcgtcatacctcctattttcaaactccagaaacgcagagaaatggcagttttag 239736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 11091063 - 11090904
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||| ||||||    
T  11091063 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattattgttg 11090964  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
     ||||||||||||| | || ||||| |  ||||| ||||||||| |||||||| ||||||    
T  11090963 tatttttcgtcctatctcctattttcaaactccagaaacgcagataaatgacaattttag 11090904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 20440574 - 20440436
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||| | |||||||||||| |||| |||||||||||||||    
T  20440574 cttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagttatcatttttgttg 20440475  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgc 190  Q
    || ||||||||||| |||||| ||||| ||||||||||||    
T  20440474 cagttttcgtcctatccccca-tttatcctccaaaaacgc 20440436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 43058875 - 43058717
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||| ||||||||||||||  ||||||||||||||||||||| ||||||||| | ||||||| |||||||||||||||| ||||||||    
T  43058875 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatca-ttttgttg 43058777  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||    
T  43058776 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 43058717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 51 - 208
Target Start/End: Complemental strand, 3026004 - 3025848
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||| |||||||||||||||||||| |||||||||||| |||| |||||||||||||| | |||||||||||||||||||||| ||||||||||    
T  3026004 cttaattaca-ttttggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaattattatttttgttg 3025907  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 208  Q
    |||||||||||||||| || ||||| |  ||||| ||| ||||||||||||||||||||    
T  3025906 catttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 3025848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 49 - 190
Target Start/End: Original strand, 8972237 - 8972378
Alignment:
Q  49 gacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgt 148  Q
    |||||||||||||||||||||||||||||||||  | ||||||||| ||||| |||||||| |||| | |||||||  ||| ||||||||||||||||||    
T  8972237 gacttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatcatttttgt 8972336  T
Q  149 tgcatttttcgtcctaccccccattttattctccaaaaacgc 190  Q
    |||||||||||| |||||||| ||||||| ||||||||||||    
T  8972337 tgcatttttcgttctaccccctattttatcctccaaaaacgc 8972378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 51 - 175
Target Start/End: Complemental strand, 1978652 - 1978528
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||| | |||||||| ||||||||||||||||||||||||    
T  1978652 cttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttgttg 1978553  T
Q  151 catttttcgtcctaccccccatttt 175  Q
    ||||||| |||||||| || |||||    
T  1978552 cattttttgtcctacctcctatttt 1978528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 52 - 208
Target Start/End: Original strand, 8425358 - 8425514
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    |||||||||||||||||||| |||||||||  ||||||||||| ||||| | || |||||||| | ||||||||||| ||||||||||||||| ||||||    
T  8425358 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggt-cttcaattatcatttgtgttgc 8425456  T
Q  152 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 208  Q
    ||||||||||||||| || ||||| |  ||||| ||| ||||||||||||||||||||    
T  8425457 atttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 8425514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 14432684 - 14432525
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||| ||||||||||||||||||||  |||||| |||||||||| |||| |||||||| | || |||| ||| |||||||||| ||||||||||    
T  14432684 cttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattatttttgttg 14432585  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||| ||||||| || ||||| |  ||| | |||||||||||||||||||||||||    
T  14432584 catttttcatcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 14432525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 49 - 189
Target Start/End: Complemental strand, 15552598 - 15552459
Alignment:
Q  49 gacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgt 148  Q
    ||||||||||||||||||||| |  ||||||||  ||||||||||| || ||| |||||||||||| | |||||||  ||| ||||||||||||||||||    
T  15552598 gacttaattacacttttggtcataatgttttggcctactcacgaaaatgatcc-gcccttttaaaacagaacaaaattgtcattcaattatcatttttgt 15552500  T
Q  149 tgcatttttcgtcctaccccccattttattctccaaaaacg 189  Q
    || |||||||||||||||| |||||||   |||||||||||    
T  15552499 tgtatttttcgtcctaccctccattttgccctccaaaaacg 15552459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 28143573 - 28143410
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||| |||||||||||||||  |||||     ||||||||| ||||||||||  ||| ||||  |||||||  |||| | || |||||| ||| |||    
T  28143573 cttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatgttt-ttg 28143475  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    || |||| |||||||  || |||||   ||||| |||||||||||||||||||||||||||||||    
T  28143474 cagttttagtcctacgtcctattttcaactccagaaacgcagagaaatgacagttttagacctac 28143410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 145; Significance: 2e-76; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 11277125 - 11276961
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||    
T  11277125 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttg 11277026  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11277025 catttttcgtcctaccccccattttattctccaaaaacgaagagaaatgacagttttagacctac 11276961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 18257139 - 18257303
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  18257139 cttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 18257238  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18257239 catttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 18257303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 10900473 - 10900309
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  10900473 cttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 10900374  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10900373 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 10900309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 20741102 - 20741266
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | ||||||| |||||||||| ||||||||||||||    
T  20741102 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcatttttgttg 20741201  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20741202 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 20741266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 15828184 - 15828020
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| | ||||||||||| | |||||||||||||||||||||||||||||||||    
T  15828184 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcatttttgttg 15828085  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15828084 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctac 15828020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 1149975 - 1149810
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||||||||||||||||| |  |||||| |||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  1149975 cttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattaccatttttgttg 1149876  T
Q  151 catttttcgtcctaccccccattttattctcca-aaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1149875 catttttcgtcctaccccccattttattctccaaaaaacgcagagaaatgacagttttagacctac 1149810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 51 - 208
Target Start/End: Complemental strand, 18505462 - 18505305
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  18505462 cttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcatttttgttg 18505363  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagtttta 208  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  18505362 catttttcgtcctaccccccattttattctccaacaacgaagagaaatgacagtttta 18505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 12935700 - 12935536
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||| || ||||| | ||||||||||||||||||||||||||||||||     
T  12935700 cttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcatttttgtta 12935601  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  12935600 catttttcgtcctaccccccattttattctccataaacacagagaaatgacagttttagacctac 12935536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 31470859 - 31470695
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||||||||| ||||||| |  |||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||    
T  31470859 cttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 31470760  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  31470759 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacaattttagatctac 31470695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 51 - 209
Target Start/End: Original strand, 2319674 - 2319832
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||| ||||||||||||||||||||  ||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  2319674 cttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 2319773  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 209  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  2319774 catttttcgtcctaccccccattttattctccagaaacgcagagaaatgatagttttag 2319832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 11444989 - 11445153
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  |||||||||| |||||||||||| ||||||| | || |||| |||||||||||||||||||||||||    
T  11444989 cttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatcatttttgttg 11445088  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||    
T  11445089 catttttcgtcctaccctccattttattctctaaaaacacagagaaatgacagttttagacctac 11445153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 28472639 - 28472802
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||   |||||||||| |||||||||| |||||||| | ||||||| |||| ||||||||||||||||||||    
T  28472639 cttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttttgttg 28472738  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28472739 catttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttagacctac 28472802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 29859828 - 29859991
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||   |||||||||| |||||||||| |||||||| | ||||||| |||| ||||||||||||||||||||    
T  29859828 cttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttttgttg 29859927  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29859928 catttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttagacctac 29859991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 52 - 213
Target Start/End: Complemental strand, 2322760 - 2322600
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    |||||||||||||||||| |||||||||||| ||||||||||||| ||| |||| |||||||| | ||||||||||||||||||||||||||||||||||    
T  2322760 ttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 2322661  T
Q  152 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacct 213  Q
    ||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||    
T  2322660 atttttcgtcctacccctcattttattctcc-aaaacacagagaaatgacagttttagacct 2322600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 52 - 215
Target Start/End: Original strand, 10899942 - 10900106
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    |||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  10899942 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10900041  T
Q  152 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||||||||    
T  10900042 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctac 10900106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 51 - 209
Target Start/End: Original strand, 12935159 - 12935318
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  12935159 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 12935258  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  12935259 catttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 12935318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 51 - 212
Target Start/End: Original strand, 4811374 - 4811535
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||||||||  || ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||     
T  4811374 cttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgttt 4811473  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacc 212  Q
    ||||||||||| |||||||||||||||||| |||||||||||| |||| |||||||||||||    
T  4811474 catttttcgtcttaccccccattttattcttcaaaaacgcagataaataacagttttagacc 4811535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 40 - 209
Target Start/End: Complemental strand, 11445541 - 11445371
Alignment:
Q  40 taaaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattat 139  Q
    ||||||| || |||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||| | ||||||||||||||||||||||    
T  11445541 taaaatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattat 11445442  T
Q  140 catttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    ||||||||||||||||||||||||||| || ||||| |  ||| | |||||||||||||||||||||||||    
T  11445441 catttttgttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 11445371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 23074001 - 23074154
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||               
T  23074001 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattat----------- 23074089  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  23074090 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctac 23074154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 22219896 - 22219737
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  22219896 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 22219797  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||| ||||| || ||||| |  ||||| |||| ||||||||||||||||||||    
T  22219796 catttttcgttctacctcctattttcaaactccagaaactcagagaaatgacagttttag 22219737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 23075671 - 23075512
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  23075671 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 23075572  T
Q  151 catttttcgtcctacccccca-ttttattctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||| ||||| || | |||||  ||||||||| |||||||||||||||||||||    
T  23075571 catttttcgttctacctcctatttttaaactccaaaaatgcagagaaatgacagttttag 23075512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 51 - 202
Target Start/End: Original strand, 15827640 - 15827794
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaa--acggtccttcaattatcatttttgt 148  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||| ||||||||||||    
T  15827640 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatcatttttgt 15827739  T
Q  149 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgaca 202  Q
    |||||||||||||||||| || ||||| |  ||||| ||||||||| ||||||||    
T  15827740 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgaca 15827794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 52 - 209
Target Start/End: Original strand, 18504922 - 18505080
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||| | ||||||||||| |||||||||||||||||||| |    
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatcatttttgtttc 18505021  T
Q  152 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    ||||||||||||||| || ||||| |  ||| | ||| | |||||||||||||||||||    
T  18505022 atttttcgtcctacctcctattttcaaactctagaaatgtagagaaatgacagttttag 18505080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 40 - 209
Target Start/End: Original strand, 31470306 - 31470476
Alignment:
Q  40 taaaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattat 139  Q
    |||| ||||| |||||||||||||||| ||||||||||||||  ||||||||||||||||| ||| ||||||||| | |||||||| ||| |||||||||    
T  31470306 taaacttaaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattat 31470405  T
Q  140 catttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
     |||||||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||    
T  31470406 tatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 31470476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 11276592 - 11276757
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||| ||| |||| ||||||||||| |||||| ||||||| |||| ||||||||||| | ||||||| |||||||||||| |||||||||||     
T  11276592 cttaattacacgtttagtccgcgtgttttggtctactcatgaaactgatcctacccttttaaaacagaacaaaatggtccttcaattgtcatttttgttt 11276691  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||| || ||||| |  ||||||||||||||||||||||||||||||| |||||    
T  11276692 catttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcctac 11276757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 20741647 - 20741485
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcat---ttttg 147  Q
    |||||||||||| ||||||||||||||||||  |||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||   ||||     
T  20741647 cttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttttttt 20741548  T
Q  148 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    ||||||||||||||||||| || ||||| |  ||||| |||||||||||||||||| ||||||    
T  20741547 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttag 20741485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 47 - 191
Target Start/End: Original strand, 29033432 - 29033577
Alignment:
Q  47 aagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcattttt 146  Q
    |||||||||||||||||||||||||||| ||||||  | ||||||||| ||||||||||||||||||| | |||||||| |||||||| |||||||||||    
T  29033432 aagacttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcattttt 29033531  T
Q  147 gttgcatttttcgtcctaccccccattttatt-ctccaaaaacgca 191  Q
    ||||||  |||| |||||||||||||||| || |||||||||||||    
T  29033532 gttgcacatttcatcctaccccccatttttttcctccaaaaacgca 29033577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 51 - 166
Target Start/End: Complemental strand, 18257680 - 18257565
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||| |||||||||||||||||||||   ||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||     
T  18257680 cttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgtta 18257581  T
Q  151 catttttcgtcctacc 166  Q
    ||||||||||||||||    
T  18257580 catttttcgtcctacc 18257565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 49 - 191
Target Start/End: Complemental strand, 29035182 - 29035040
Alignment:
Q  49 gacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgt 148  Q
    ||||||||||||||||| ||||||||||||| |  ||||||||||| ||||  ||||||||||||| | |||||||  |||||| | |||||||||||||    
T  29035182 gacttaattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaacaaaattgtcctttagttatcatttttgt 29035083  T
Q  149 tgcatttttcgtcctaccccccattttattctccaaaaacgca 191  Q
    |||||||||||||| |||| ||||||| | |||||||||||||    
T  29035082 tgcatttttcgtcccaccctccattttttcctccaaaaacgca 29035040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 52 - 185
Target Start/End: Complemental strand, 3835268 - 3835135
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    |||||||||||||||||||  ||||||||   ||||||||||| ||||||||||  ||||||| | |||||||  |||||| ||||||||||||||| ||    
T  3835268 ttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcatttttgtggc 3835169  T
Q  152 atttttcgtcctaccccccattttattctccaaa 185  Q
    |||||||||||||||||||||||||| |||||||    
T  3835168 atttttcgtcctaccccccattttatcctccaaa 3835135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 18296147 - 18296285
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||| | |||| ||||||||||||||  |||||||| ||| || |  ||||||||||||| | |||||||| |||||||| |||||||||||||||    
T  18296147 cttaattataattttagtcctcgtgttttgacttactcacaaaattgatattgcccttttaaaacagaacaaaaccgtccttcatttatcatttttgttg 18296246  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgc 190  Q
    |||||||||||||| |||||||||||| ||||||||||||    
T  18296247 catttttcgtccta-cccccattttatcctccaaaaacgc 18296285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 51 - 175
Target Start/End: Complemental strand, 4811799 - 4811675
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||| ||||||| ||||||||||||||  |||||| ||||||| || |||  |||||||| | |||||||||||||||||||||||||||||||||    
T  4811799 cttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcatttttgttg 4811700  T
Q  151 catttttcgtcctaccccccatttt 175  Q
    |||||||| || |||| || |||||    
T  4811699 catttttcatcatacctcctatttt 4811675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 1149467 - 1149553
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaatt 137  Q
    |||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||| | ||||||| ||||||||||||    
T  1149467 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaatt 1149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 35163639 - 35163566
Alignment:
Q  142 tttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||| ||||| |||| |||||||| || |||||   |||||||||| |||||||||||||||||||| |||||    
T  35163639 ttttttttgcagttttagtcctacctcctattttcaactccaaaaacacagagaaatgacagttttaggcctac 35163566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 105
Target Start/End: Complemental strand, 22534268 - 22534214
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcc 105  Q
    |||||||||||||||||||||||| |||||    |||||||||| ||||||||||    
T  22534268 cttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtcctgcc 22534214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 145; Significance: 2e-76; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 19359138 - 19359302
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19359138 cttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcatttttgttg 19359237  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19359238 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttctagacctac 19359302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 42 - 211
Target Start/End: Complemental strand, 29455294 - 29455125
Alignment:
Q  42 aaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatca 141  Q
    |||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||    
T  29455294 aaattaaggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatca 29455195  T
Q  142 tttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagac 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  29455194 tttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagac 29455125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 2865298 - 2865134
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||     
T  2865298 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttt 2865199  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2865198 catttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctac 2865134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 8647440 - 8647604
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||| | ||||||| |||||||||||||||||||||||||    
T  8647440 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcatttttgttg 8647539  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8647540 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 8647604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 18183512 - 18183348
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  18183512 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 18183413  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  18183412 catttttcgtcctacccctcattttattctccaaaaacgcagagaaataacagttttagacctac 18183348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 5819472 - 5819308
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  5819472 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 5819373  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  5819372 catttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagatctac 5819308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 51 - 211
Target Start/End: Complemental strand, 24362379 - 24362219
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||||||||||    
T  24362379 cttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcatttttgttg 24362280  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagac 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24362279 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagac 24362219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 41 - 215
Target Start/End: Original strand, 15708963 - 15709136
Alignment:
Q  41 aaaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatc 140  Q
    |||||| || ||||||||||||||||||||| |||||||||  ||||||||||||||||  ||||||||||||| | |||||||||||||||||||||||    
T  15708963 aaaatttaggcttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatc 15709062  T
Q  141 atttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15709063 atttttgttgcatatttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttagacctac 15709136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 8460932 - 8461096
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||| ||||||||||| |||| ||||||  ||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  8460932 cttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 8461031  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8461032 catttttcgtcataccccccattttattctccaaaaatgcagagaaatgacagttttagacctac 8461096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 52 - 215
Target Start/End: Complemental strand, 15372415 - 15372252
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||    
T  15372415 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 15372316  T
Q  152 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||| || ||||  ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15372315 attttttgttctacatcccattttattttccaaaaacgcagagaaatgacagttttagacctac 15372252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 14215786 - 14215622
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||| |||||||||||||||||||   |||||||||||||| |||||||||||||||| | |||||||||||||||||| ||||||||||||||    
T  14215786 cttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttg 14215687  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14215686 catttttcgtcttaacccccattttattctccaaaaacgtagagaaatgacagttttagacctac 14215622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 164734 - 164570
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||| | ||||| ||||| ||||||||   |||||| ||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  164734 cttaattataattttgatcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 164635  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  164634 cattttttgtcctaccccccattttattctccaaaaatgtagagaaatgacagttttagacctac 164570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 51 - 214
Target Start/End: Complemental strand, 14464063 - 14463901
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||| |||||||||||||||  |||||||||||||  |  || |||||||||||| ||||||||| ||||||||||||||||||| |||    
T  14464063 cttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatcatttttattg 14463964  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagaccta 214  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  14463963 catttttcgtccta-ccccaattttattctccaaaaacgcagagaaatgacagttttagaccta 14463901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 52 - 209
Target Start/End: Original strand, 5818932 - 5819090
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||    
T  5818932 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 5819031  T
Q  152 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||| |||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  5819032 atttttcgtcttacctcctattttcaaactccagaaacgcagagaaatgacagttttag 5819090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 52 - 209
Target Start/End: Original strand, 18182973 - 18183131
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    |||||||||||||||||| |||||||||||  ||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  18182973 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18183072  T
Q  152 atttttcgtcctacccccca-ttttattctccaaaaacgcagagaaatgacagttttag 209  Q
    ||||||||||||||| || | |||||| | ||| |||||||||||||||||||||||||    
T  18183073 atttttcgtcctacctcctatttttataccccagaaacgcagagaaatgacagttttag 18183131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 49 - 209
Target Start/End: Original strand, 2864754 - 2864915
Alignment:
Q  49 gacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgt 148  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||| || || ||||||||||||| |||||||||||||||||||||||||||||||||    
T  2864754 gacttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcatttttgt 2864853  T
Q  149 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  2864854 tgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 2864915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 8647981 - 8647822
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  8647981 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 8647882  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    ||||||||||| ||||  | ||||| |  ||||| |||||||||||||||||||||||||    
T  8647881 catttttcgtcataccttctattttcaaactccataaacgcagagaaatgacagttttag 8647822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 19359679 - 19359520
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  19359679 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 19359580  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
     ||||||||||||||| || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  19359579 gatttttcgtcctacctcctattttcaaactccagaaacgtagagaaatggcagttttag 19359520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 50 - 209
Target Start/End: Original strand, 14215242 - 14215402
Alignment:
Q  50 acttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgtt 149  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||  | ||||||||||| | ||||||| ||||||||| ||||||||||||||    
T  14215242 acttaattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatcatttttgtt 14215341  T
Q  150 gcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    ||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  14215342 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 14215402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 24332110 - 24331940
Alignment:
Q  48 agacttaattacactttt-ggtcctcgtgttttggtttactcacgaaactggtcctgccctttt-aaaatataacaaaacggtccttcaattatcatttt 145  Q
    |||||||||||||||||| |||| || ||||||||  |||||||||||||| ||||||| |||| |||| | |||||||||||||| |||||||||||||    
T  24332110 agacttaattacactttttggtcatcatgttttggcatactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcatttt 24332011  T
Q  146 t-gttgcattttt-cgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagaccta 214  Q
    | ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24332010 ttgttgcattttttcgtcctaccccccattctattctccaaaaacgcagagaaatgacagttttagaccta 24331940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 55 - 209
Target Start/End: Original strand, 24361843 - 24361997
Alignment:
Q  55 attacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatt 154  Q
    |||||||||||||||| | ||||||||  ||| |||||||||| || ||||||| ||||| | ||||||| |||||||||| ||||||||||||||||||    
T  24361843 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgttgcatt 24361942  T
Q  155 tttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 209  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  24361943 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24361997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 8461480 - 8461315
Alignment:
Q  45 ttaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcattt 144  Q
    ||||| |||||||||||||||||||||||||||||||  |||||||||||||| |||||| ||||||||| | |||||||||||||||||||||||||||    
T  8461480 ttaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcattt 8461381  T
Q  145 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    ||| ||||||||||||| |||| || ||||| |  ||||| |||||||||||||||||| ||||||    
T  8461380 ttgctgcatttttcgtcatacctcctattttcaaactccagaaacgcagagaaatgacaattttag 8461315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 55 - 209
Target Start/End: Original strand, 24325218 - 24325372
Alignment:
Q  55 attacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatt 154  Q
    |||||||||||||||| | ||||||||  ||| |||||||||| || ||||||| ||||| | ||||||| |||||||||| |||||||||||| |||||    
T  24325218 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgtcgcatt 24325317  T
Q  155 tttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 209  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  24325318 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24325372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 51 - 209
Target Start/End: Original strand, 24331561 - 24331722
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatc--atttttgt 148  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||   |||||||    
T  24331561 cttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctattttttgt 24331660  T
Q  149 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||| ||||| | || ||||| |  ||||| |||||||||||||||||||||||||    
T  24331661 tgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 24331722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 51 - 191
Target Start/End: Complemental strand, 7349560 - 7349420
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||| | ||||||||  ||||||| |||||||||||||||    
T  7349560 cttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcatttttgttg 7349461  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgca 191  Q
    || ||||| |||||||||||||||| | |||||||||||||    
T  7349460 cacttttcatcctaccccccattttttcctccaaaaacgca 7349420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 16018591 - 16018753
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||||||| |||||||||||  || |||||||| || || ||||||||||||||| |||||||||||||||||||||| |||||| |||    
T  16018591 cttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattat-atttttattg 16018689  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||| ||||||| ||||||||||||||||||||||   ||| |||||||||||||||||||||    
T  16018690 cattttccgtccta-cccccattttattctccaaaaatatagaaaaatgacagttttagacctac 16018753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 52 - 211
Target Start/End: Complemental strand, 16019129 - 16018969
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||||||||||||||| ||||||||  ||||||||||| ||||||||| ||||||||||| || |||| ||| |||||||||||||||||||||     
T  16019129 ttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcatttttgttgt 16019030  T
Q  152 atttttcgtcctacccccca-ttttattctccaaaaacgcagagaaatgacagttttagac 211  Q
    ||||||||||||||| || | |||||  ||||| |||||||||||||||||||||||||||    
T  16019029 atttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttagac 16018969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 51 - 208
Target Start/End: Original strand, 164193 - 164350
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||| || | |||||||||||| ||||||||||| ||||||||    
T  164193 cttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatca-ttttgttg 164291  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 208  Q
    |||||||||||||||| || ||||| |  ||||| |||||||||||||||||| |||||    
T  164292 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaatttta 164350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 51 - 211
Target Start/End: Complemental strand, 25000632 - 25000471
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||||||| || ||||||||  ||||||||||| ||||| ||  ||||||||| | ||||||| |||| ||||||||||||||||||||    
T  25000632 cttaattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatcatttttgttg 25000533  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 211  Q
    |||||||||||| ||| || ||||| |  |||||||||||||||||||||||||||||||||    
T  25000532 catttttcgtcccacctcctattttcaaactccaaaaacgcagagaaatgacagttttagac 25000471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 29454736 - 29454901
Alignment:
Q  45 ttaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcattt 144  Q
    ||||| ||||||| ||||||||||| | |||||||||  ||||||||||| ||||| ||||||||||||| | ||||||||||||||| |||||||||||    
T  29454736 ttaaggcttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattatcattt 29454835  T
Q  145 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    ||| |||||||||||||||||| || ||||| |  ||||| |||||||||||||||| ||||||||    
T  29454836 ttgctgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 29454901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 71 - 215
Target Start/End: Original strand, 25000112 - 25000256
Alignment:
Q  71 tcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacccccc 170  Q
    |||||||||||  ||||||||||  ||||| |||||| |||||| | || |||| ||||||| ||||||||||||| |||||||||| ||||||||||||    
T  25000112 tcgtgttttggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatcatttttattgcattttttgtcctacccccc 25000211  T
Q  171 attttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  25000212 attttattctccaaaaacgtagagaaatgacagttttagatctac 25000256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 49 - 208
Target Start/End: Original strand, 15371871 - 15372030
Alignment:
Q  49 gacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgt 148  Q
    |||||||||||||||||| ||||||| ||||||| ||||||||||  ||||||||||||||||||| | ||||||| |||||||||||||||||||||||    
T  15371871 gacttaattacacttttgatcctcgtattttggtctactcacgaat-tggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 15371969  T
Q  149 tgcatttttcgtcctaccccccattt-tattctccaaaaacgcagagaaatgacagtttta 208  Q
    |||||||||||||| ||| || ||||  |  ||| | |||||||||||||||| |||||||    
T  15371970 tgcatttttcgtcccacctcctatttgcaaactctagaaacgcagagaaatgatagtttta 15372030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 51 - 175
Target Start/End: Original strand, 7348561 - 7348685
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||| ||||||||||| |||||| || ||||||||||| ||||| ||||||||||||| | ||||||||  ||||||  |||||||||||||||    
T  7348561 cttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttatcatttttgttg 7348660  T
Q  151 catttttcgtcctaccccccatttt 175  Q
    || ||||||||||||||||||||||    
T  7348661 cacttttcgtcctaccccccatttt 7348685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 51 - 189
Target Start/End: Original strand, 4623150 - 4623286
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||||||| ||||||||||  |||||||||||| ||||||||||  ||||||| | |||||||  |||||||||||||||||||| | |    
T  4623150 cttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattatcatttttatgg 4623249  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacg 189  Q
    |||||| |||||||  ||||||||||| |||||||||||    
T  4623250 cattttccgtccta--ccccattttatcctccaaaaacg 4623286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 15709511 - 15709353
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||||||| | |||||||||  |||||| |||||| ||| |||||||| |||| | ||||||||||||||| | ||||||||| |||||    
T  15709511 cttaattacacttttggtcattgtgttttggcctactcatgaaactagtcatgcccttt-aaaacagaacaaaacggtcctttagttatcatttctgttg 15709413  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||| || ||||| |  ||||| || ||||||||||||||||||||||    
T  15709412 catttttcgtcctacctcctattttcaaactccataagcgcagagaaatgacagttttag 15709353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 51 - 169
Target Start/End: Complemental strand, 4222265 - 4222147
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  | ||||||||| ||||| ||||||||||||| | |||||||  ||| |||| ||||||||||| |||    
T  4222265 cttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcatttttattg 4222166  T
Q  151 catttttcgtcctaccccc 169  Q
    |||||||||||||||||||    
T  4222165 catttttcgtcctaccccc 4222147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 55 - 187
Target Start/End: Complemental strand, 6019309 - 6019177
Alignment:
Q  55 attacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcat- 153  Q
    |||||| |||||||| || |||||||| | ||||||||||||| || ||| ||||||||| | |||||||| ||| || ||||||||||||||||||||     
T  6019309 attacatttttggtcatcatgttttggct-actcacgaaactgatcttgctcttttaaaacagaacaaaactgtcttttaattatcatttttgttgcatt 6019211  T
Q  154 ttttcgtcctaccccccattttattctccaaaaa 187  Q
    ||||||||||||| |||||||||| |||||||||    
T  6019210 ttttcgtcctacctcccattttatcctccaaaaa 6019177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 51 - 187
Target Start/End: Original strand, 4219665 - 4219800
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||| ||||||||||||||  || | || ||| ||||| |||| |||||||| | ||||||   |||||| | |||||||||||||||    
T  4219665 cttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagttatcatttttgttg 4219764  T
Q  151 catttttcgtcctaccccccattttattctccaaaaa 187  Q
    |||||||||||||| |||||||||||| |||||||||    
T  4219765 catttttcgtccta-cccccattttatcctccaaaaa 4219800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 62 - 188
Target Start/End: Complemental strand, 4624757 - 4624631
Alignment:
Q  62 ttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttttcgtc 161  Q
    |||| |||||||||||||    ||||||||||| ||||| || |  ||||||| ||||||||||  || |||||||||||||| ||||||||||||||||    
T  4624757 ttttcgtcctcgtgttttaacctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgtc 4624658  T
Q  162 ctaccccccattttattctccaaaaac 188  Q
    |||||||||||||||| || |||||||    
T  4624657 ctaccccccattttatccttcaaaaac 4624631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 51 - 188
Target Start/End: Original strand, 6018316 - 6018452
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||| ||||||| ||||||||||| | ||||||||||||||||| || |||||||||| | |||||||   | |||||||||||||||||||||    
T  6018316 cttaattacatttttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaacaaaattat-cttcaattatcatttttgttg 6018414  T
Q  151 catttttcgtcctaccccccattttattctccaaaaac 188  Q
    || |||| ||||||||| | |||||   ||||||||||    
T  6018415 cagttttagtcctaccctctattttcacctccaaaaac 6018452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 13814190 - 13814131
Alignment:
Q  131 ttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgca 191  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||    
T  13814190 ttcaattatcatttttgttgcacttttcgtcctac-ccccattttatcctccaaaaacgca 13814131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 2591264 - 2591303
Alignment:
Q  9 ctagctacatgatattattagctcaatattgtaaaattaa 48  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2591264 ctagctacatgatattattagctcaatattgtaaaattaa 2591303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 14462686 - 14462730
Alignment:
Q  131 ttcaattatcatttttgttgcatttttcgtcctaccccccatttt 175  Q
    |||||||||||||||||||||||||||||||||||| || |||||    
T  14462686 ttcaattatcatttttgttgcatttttcgtcctacctcctatttt 14462730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 24325639 - 24325594
Alignment:
Q  166 cccccattttattctccaaaaacgcagagaaatgacagttttagac 211  Q
    |||||||||||||||||| ||   ||||||||||||||||||||||    
T  24325639 cccccattttattctccagaagtacagagaaatgacagttttagac 24325594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 209
Target Start/End: Original strand, 10721873 - 10721945
Alignment:
Q  137 tatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||| ||| ||||| |||| |||||||| || |||||   ||||| ||||| |||||||||||||||||||    
T  10721873 tatcatgttttttgcagttttagtcctacctcctattttcaactccagaaacgtagagaaatgacagttttag 10721945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 145; Significance: 2e-76; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 37726931 - 37727095
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||| | || ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37726931 cttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttg 37727030  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37727031 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 37727095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 20840562 - 20840726
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  20840562 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatcatttttgttg 20840661  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  20840662 catttttcgtcctaccccccattttattctccttaaacgcagagaaatgacagttttagacctac 20840726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 39556120 - 39555956
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||| ||||    
T  39556120 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttcgttg 39556021  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39556020 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 39555956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 51 - 211
Target Start/End: Complemental strand, 31779195 - 31779035
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  31779195 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 31779096  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagac 211  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  31779095 catttttcgtcccaccccccattttattctccaaaaacgcagagaaatgtcagttttagac 31779035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 52 - 215
Target Start/End: Original strand, 5136983 - 5137146
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||||||||||||||||||||||||   |||||||||| ||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  5136983 ttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 5137082  T
Q  152 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5137083 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 5137146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 52 - 215
Target Start/End: Original strand, 41046703 - 41046866
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||||||||||||||||||||||||  || | |||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  41046703 ttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41046802  T
Q  152 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41046803 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 41046866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 24301099 - 24300935
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||| |||||||||| |||||||| | |||||||||||||||| | ||||||||||||||    
T  24301099 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcatttttgttg 24301000  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24300999 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 24300935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 48 - 215
Target Start/End: Complemental strand, 25853773 - 25853606
Alignment:
Q  48 agacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttg 147  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||||||||||| || | |||||||| | ||||||| ||||||||||||||||||||||    
T  25853773 agacttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttg 25853674  T
Q  148 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25853673 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctac 25853606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 55 - 204
Target Start/End: Original strand, 48452995 - 48453144
Alignment:
Q  55 attacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatt 154  Q
    ||||||||||||||| |||||||||||  |||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||    
T  48452995 attacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 48453094  T
Q  155 tttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48453095 tttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagt 48453144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 23644464 - 23644628
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||| ||||||  ||||||||||| |||||||||| |||||||| | |||||||| ||||||||||||||||||||||||    
T  23644464 cttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcatttttgttg 23644563  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  23644564 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctac 23644628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 51 - 214
Target Start/End: Complemental strand, 32535506 - 32535339
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatc-----atttt 145  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||     |||||    
T  32535506 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattaaatttt 32535407  T
Q  146 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagaccta 214  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  32535406 tgttgcatttttcgtccta-cccccattttattctccaaaaacgcagagaaatgatagttttagaccta 32535339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 43973443 - 43973607
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||||||||||||||||||   ||||||||||| || |  ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  43973443 cttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 43973542  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  43973543 catttttcgtcctaccccccattttattctccaaaaacgcagataaataacagttttagacctac 43973607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 46 - 215
Target Start/End: Complemental strand, 27394125 - 27393956
Alignment:
Q  46 taagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttt 145  Q
    |||| |||||||||||||||||||||||||||||||  |||||||||||  ||||||||| |||||||| | ||||||||| ||||||||||||||||||    
T  27394125 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcatttt 27394026  T
Q  146 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||| | |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  27394025 tgttgcattttccatcctacccccaattttattctccaaaaacgcagagaaataacagttttagacctac 27393956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 51 - 211
Target Start/End: Complemental strand, 26837898 - 26837739
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  |||| ||||||||||| ||||||||| |||||| |||||||||||| ||||| ||||||||||||||    
T  26837898 cttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgcccttt-aaaatagaacaaaacggtcattcaagtatcatttttgttg 26837800  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagac 211  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26837799 cattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagac 26837739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 30104484 - 30104647
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||||||||||||||||||   ||||||||||| ||||||||||||||||||| | || | ||||||||||||||||||||||||||||    
T  30104484 cttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcatttttgttg 30104583  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||    
T  30104584 catttttcgtccta-cccccattttattatctaaaaacgcagagaaatgacagttttagacctac 30104647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 46 - 214
Target Start/End: Complemental strand, 17465040 - 17464871
Alignment:
Q  46 taagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttt 145  Q
    |||| |||||||||| ||||||||||||||||||||  ||| || ||||||||||   ||||||||||||| ||||||||||||||||||||||||||||    
T  17465040 taaggcttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtccttcaattatcatttt 17464941  T
Q  146 tgttgcat-ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagaccta 214  Q
    |||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  17464940 tgttgcatttttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagaccta 17464871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 53 - 215
Target Start/End: Complemental strand, 22425354 - 22425192
Alignment:
Q  53 taattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgca 152  Q
    |||||||||||||||||||||||||| ||  |||||||||| |||||| ||||||| ||||| | ||||||||||| |||||||||||||||||||||||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgca 22425255  T
Q  153 tttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | | ||||||| ||||    
T  22425254 tttttcgtcctaccccccattttattctccaaaaacgcagagaaattagatttttagatctac 22425192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 51 - 209
Target Start/End: Original strand, 31778655 - 31778814
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| | ||||||||||||||||  |||||||||||||||    
T  31778655 cttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcatttttgttg 31778754  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  31778755 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 31778814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 37727473 - 37727314
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||    
T  37727473 cttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttg 37727374  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  37727373 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 37727314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 43973983 - 43973824
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  43973983 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 43973884  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||| || ||||| || | ||| |||||||||||||||||||||||||    
T  43973883 catttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 43973824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 27393657 - 27393822
Alignment:
Q  45 ttaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcattt 144  Q
    ||||| ||||||||||||||||||||||||||||||   ||||||| |||||||||||||| |||||||| | |||||||||||||||||||||||||||    
T  27393657 ttaaggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcattt 27393756  T
Q  145 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    ||||||||||||||||||||||||| ||||| |  | ||| |||||||||||||||||||||||||    
T  27393757 ttgttgcatttttcgtcctaccccctattttcaaaccccagaaacgcagagaaatgacagttttag 27393822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 20841104 - 20840945
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||| ||||||||||||  |||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||    
T  20841104 cttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttg 20841005  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||    
T  20841004 catttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 20840945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 51 - 209
Target Start/End: Original strand, 25853236 - 25853395
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25853236 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatcatttttgttg 25853335  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||| ||||| || ||||| |  ||||| |||||||||||||| ||||||||||    
T  25853336 catttttcgttctacctcctattttcaaactccagaaacgcagagaaataacagttttag 25853395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 52 - 215
Target Start/End: Complemental strand, 26275108 - 26274946
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||| | |||||| ||| ||||||||   ||||||||||||||||||| ||||||||||| | || |||||||||| ||||||||||||||||||||    
T  26275108 ttaattataattttggcccttgtgttttgacctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatcatttttgttgc 26275009  T
Q  152 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
     |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26275008 -tttttcgtcctaccccccattttattctccaaaaccgcagagaaatgacagttttagacctac 26274946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 51 - 209
Target Start/End: Original strand, 39555580 - 39555739
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||| | ||||||| |||||||||||||||||||||||||    
T  39555580 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcatttttgttg 39555679  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||| ||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  39555680 catttttcgttctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 39555739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 52 - 190
Target Start/End: Complemental strand, 25612519 - 25612381
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    |||||||||||||||||||||||||||||   ||||||||||| ||||||||||||||||||||| |||||||| ||| || ||||||||||||||||||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcatttttgttgc 25612420  T
Q  152 atttttcgtcctaccccccattttattctccaaaaacgc 190  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  25612419 atttttcgtcctaccccccattttatcctccaaaaacgc 25612381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 4275907 - 4275748
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| ||| ||||||||| | ||||||||||||||| |||||||||||||||||    
T  4275907 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcatttttgttg 4275808  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||    
T  4275807 catttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 4275748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 5137524 - 5137365
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  |||||| ||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  5137524 cttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 5137425  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    ||||||| |||||| | || ||||| |  ||||| |||||||||||||||||||||||||    
T  5137424 catttttagtcctatctcctattttcaaactccagaaacgcagagaaatgacagttttag 5137365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 39 - 209
Target Start/End: Complemental strand, 30098318 - 30098147
Alignment:
Q  39 gtaaaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaatta 138  Q
    |||||| |||| ||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||| | ||||||| |||||||||||||    
T  30098318 gtaaaaataaggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaatta 30098219  T
Q  139 tcatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||||||||||||||| || ||||| |  || || ||||||||||| |||||||||||||    
T  30098218 tcatttttgttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagatatgacagttttag 30098147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 51 - 211
Target Start/End: Complemental strand, 29801959 - 29801798
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||| ||||||| ||||||  ||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  29801959 cttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttg 29801860  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 211  Q
    |||||||||||| ||| || ||||| |  ||||| |||||||||||||||||| ||||||||    
T  29801859 catttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttagac 29801798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 51 - 209
Target Start/End: Original strand, 17464493 - 17464652
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  || || ||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  17464493 cttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 17464592  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||| || ||||| |  ||||| ||||| | |||||||||||||||||    
T  17464593 catttttcgtcctacctcctattttcaaactccagaaacgtaaagaaatgacagttttag 17464652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 52 - 209
Target Start/End: Original strand, 26837363 - 26837521
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||| |||||||||| || ||||||  ||||||||||| |||||||||||||||| || ||||| ||||||||||||||||||||||||||||||    
T  26837363 ttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatcatttttgttgc 26837462  T
Q  152 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    ||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  26837463 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 26837521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 52 - 209
Target Start/End: Original strand, 32534962 - 32535120
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||||||||||||||||||||||||  ||||||||||| |||||||||| |||||||| | ||||||||||||||||||||||||||||||||||    
T  32534962 ttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 32535061  T
Q  152 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    ||||||||||||||| || ||||| |  ||| | || | ||||||||||||||||||||    
T  32535062 atttttcgtcctacctcctattttcaaactctagaatcacagagaaatgacagttttag 32535120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 51 - 191
Target Start/End: Complemental strand, 50116952 - 50116812
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||| |||||||||||||  |||||||||||| ||||| ||||||||| ||| | |||||||||||| |||| |||||||||||||||    
T  50116952 cttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttgttg 50116853  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgca 191  Q
    || |||||||||||||||||||||| | |||||||||||||    
T  50116852 caattttcgtcctaccccccattttttcctccaaaaacgca 50116812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 51 - 209
Target Start/End: Original strand, 22424816 - 22424975
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||| |||||||||  |  |||| ||||||||||| ||| |||||||||| | |||||||||||||||||||||||||||||||||    
T  22424816 cttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 22424915  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||| || ||||| |  ||||| ||| |||||||||||||||||||||    
T  22424916 catttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttag 22424975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 23645008 - 23644849
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||| ||||||||||||||||||||||  ||||||||||| ||||||| ||||||||||| | |||||||||||| ||||||||||||||||||||    
T  23645008 cttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 23644909  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||| ||||||| || ||||| |  ||| |  ||||||||||||||||||||||||    
T  23644908 catttttcatcctacctcctattttcaaactctagtaacgcagagaaatgacagttttag 23644849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 51 - 170
Target Start/End: Original strand, 29801358 - 29801477
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||||||| |||||||||||  ||||||| ||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||    
T  29801358 cttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttg 29801457  T
Q  151 catttttcgtcctacccccc 170  Q
    ||||||||||| ||||||||    
T  29801458 catttttcgtcttacccccc 29801477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 52 - 209
Target Start/End: Original strand, 26274570 - 26274728
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||| ||||| |||| || ||||||  ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  26274570 ttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 26274669  T
Q  152 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||| |||| || ||||| |  ||||| ||||||||  |||||||||||||||    
T  26274670 atttttcgtcatacctcctattttcaaactccagaaacgcagttaaatgacagttttag 26274728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 52 - 209
Target Start/End: Original strand, 24300560 - 24300717
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||| |||||||| ||||||||||| ||| ||||||||||||||||| |||||||||| | || |||||||| ||||||||||||||||||||||    
T  24300560 ttaattacatttttggtc-tcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattatcatttttgttgc 24300658  T
Q  152 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    | ||||||||| ||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  24300659 aattttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacagttttag 24300717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 51474877 - 51474737
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||| | ||||||||||  ||||||||||| ||||| ||||||||||||| |||||||||  |||||| | |||||||||||||||    
T  51474877 cttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttttaaaacataacaaaattgtcctttagttatcatttttgttg 51474778  T
Q  151 catttttcgtcctacccccca-ttttattctccaaaaacgc 190  Q
    ||||||||||||||||||| | |||||| ||||||||||||    
T  51474777 catttttcgtcctacccccaatttttatcctccaaaaacgc 51474737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 51 - 188
Target Start/End: Complemental strand, 23228550 - 23228414
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||| ||||||||||  ||||||||||| || || |||||||||||||   |||||||  |||||||||||||||||||| |||    
T  23228550 cttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaacg-aacaaaattgtccttcaattatcatttttattg 23228452  T
Q  151 catttttcgtcctaccccccattttattctccaaaaac 188  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  23228451 catttttcgtcctacctcccattttatcctccaaaaac 23228414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 51 - 187
Target Start/End: Original strand, 45965940 - 45966076
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||  |  |||||| ||||||||| |||||||||  ||||||| |||||||||| |||||    
T  45965940 cttaattacacttttggtcctcgtgttttggcatactcacgaagttaatcctgctcttttaaaacataacaaaaatgtccttcgattatcatttgtgttg 45966039  T
Q  151 catttttcgtcctaccccccattttattctccaaaaa 187  Q
    |||||||||| ||| |||||||||| | |||||||||    
T  45966040 catttttcgttctaacccccattttctcctccaaaaa 45966076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 51 - 189
Target Start/End: Complemental strand, 32697243 - 32697106
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||| | |||||||||||||||||| |  ||||||||||| | |||  |||||||||||| | |||||||  || |||||||||||||||||||||    
T  32697243 cttaattatatttttggtcctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaacaaaattgtgcttcaattatcatttttgttg 32697144  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacg 189  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  32697143 catttttcgtcctac-ccccattttatcctccaaaaacg 32697106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 52 - 209
Target Start/End: Complemental strand, 41047239 - 41047083
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||||||| | || || ||||||||  |||||||||||||||| ||| |||||||||| | || |||||| ||||||||||||||||||||||||    
T  41047239 ttaattacactttcg-tcttcatgttttggcctactcacgaaactggttctgtccttttaaaacagaataaaacg-tccttcaattatcatttttgttgc 41047142  T
Q  152 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    ||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||    
T  41047141 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 41047083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 48 - 193
Target Start/End: Complemental strand, 25420687 - 25420542
Alignment:
Q  48 agacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttg 147  Q
    ||||||||||||||||||| || |||| |||||   ||||||||||| || ||  |||||||||||||| || ||||  ||||||||||||| |||||||    
T  25420687 agacttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattatttttg 25420588  T
Q  148 ttgcatttttcgtcctaccccccattttattctccaaaaacgcaga 193  Q
    |||||||||||||| ||||||||||||||| || |||||| |||||    
T  25420587 ttgcatttttcgtcataccccccattttatccttcaaaaatgcaga 25420542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 51 - 163
Target Start/End: Original strand, 51473430 - 51473542
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||| | |||||||  |||||||  |||||||||||||||    
T  51473430 cttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatcatttttgttg 51473529  T
Q  151 catttttcgtcct 163  Q
    || |||| |||||    
T  51473530 cacttttggtcct 51473542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 37220559 - 37220698
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||| ||||||  ||||||| | |  | || ||| ||||||||| | || ||||  |||||||| |||||||||||||||    
T  37220559 cttaattacacttttggtcctcgtattttggcctactcacaatatcgatcatgctcttttaaaacagaataaaattgtccttcagttatcatttttgttg 37220658  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgc 190  Q
    || |||||||||||||| ||||||||| ||||||||||||    
T  37220659 cacttttcgtcctaccctccattttatcctccaaaaacgc 37220698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 18010271 - 18010162
Alignment:
Q  68 tcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccc 167  Q
    ||||| |||||| || ||||||||||| |||| | |||||||||||| | |||||||  ||  ||||||||||||||||||||||||||||||||| |||    
T  18010271 tcctcctgttttcgtctactcacgaaaatggttccgcccttttaaaacagaacaaaattgttattcaattatcatttttgttgcatttttcgtcctgccc 18010172  T
Q  168 cccattttat 177  Q
     |||||||||    
T  18010171 tccattttat 18010162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 55 - 190
Target Start/End: Original strand, 25419150 - 25419285
Alignment:
Q  55 attacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtcc-ttcaattatca-tttttgttgca 152  Q
    |||| |||||||||| ||||||||| | |||||||||||| | || |||||||||||||| | |||||||| |||| ||||||||||| ||||| |||||    
T  25419150 attatacttttggtcttcgtgttttagcttactcacgaaattagttctgcccttttaaaacagaacaaaactgtcctttcaattatcatttttttttgca 25419249  T
Q  153 tttttcgtcctaccccccattttattctccaaaaacgc 190  Q
     |||| |||||  |||||||||||  ||||||||||||    
T  25419250 gttttagtccttacccccatttta--ctccaaaaacgc 25419285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 23227334 - 23227398
Alignment:
Q  127 gtccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgca 191  Q
    ||||| ||||| ||||||||||||||||||||||||| | ||||||||||| |||||||||||||    
T  23227334 gtcctccaattttcatttttgttgcatttttcgtccttctccccattttatcctccaaaaacgca 23227398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 51 - 135
Target Start/End: Complemental strand, 37222114 - 37222030
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaa 135  Q
    ||||||||||||||||||||||||||||||   ||||||| ||| |||||||||| |||||||| | ||||||||  ||||||||    
T  37222114 cttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaaccatccttcaa 37222030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 165 - 211
Target Start/End: Original strand, 29801532 - 29801578
Alignment:
Q  165 ccccccattttattctccaaaaacgcagagaaatgacagttttagac 211  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||    
T  29801532 ccccccattttattcttcaaaaatgcagagaaatgacagttttagac 29801578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 215
Target Start/End: Original strand, 55192222 - 55192283
Alignment:
Q  154 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||| |||||||| || |||||   ||||| |||||||||||||||||||||||||||||||    
T  55192222 ttttagtcctacctcctattttcaactccagaaacgcagagaaatgacagttttagacctac 55192283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 27200235 - 27200072
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||||||||| |  |||||     ||||||||| |||| |||||  ||| ||||  ||||| || |||||  || |||||| ||| |||    
T  27200235 cttaattacacttttggtccttgcattttgaccagctcacgaaaatggttctgcctctttcaaatcgaacaataccgtccta-aactatcatgttttttg 27200137  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    || |||| ||| |||| || |||||   ||||| ||||||||||||||||||| |||||||||||    
T  27200136 cagttttagtcatacctcctattttcaactccagaaacgcagagaaatgacaggtttagacctac 27200072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 49407925 - 49407961
Alignment:
Q  179 ctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||| ||||||||||||    
T  49407925 ctccaaaaacgcagagaaatgacaattttagacctac 49407961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 215
Target Start/End: Original strand, 37075781 - 37075854
Alignment:
Q  142 tttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||| ||||| |||| |||||||| |  |||||   ||||| ||||||||||||||||| |||||||||||||    
T  37075781 ttttttttgcagttttagtcctacctcttattttcaactccagaaacgcagagaaatgaccgttttagacctac 37075854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 176
Target Start/End: Original strand, 32695706 - 32695830
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||| ||||||||||| | ||||||  |||| |||||| || |  || | |||||||| | |||||||  ||||| | ||||| |||||||||||    
T  32695706 ttaattacatttttggtcctcatattttggcctacttacgaaattgattatgtctttttaaaacagaacaaaattgtcctacgattattatttttgttgc 32695805  T
Q  152 atttttcgtcctaccccccatttta 176  Q
    | |||| |||||  ||| |||||||    
T  32695806 aattttagtccttaccctcatttta 32695830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 141; Significance: 4e-74; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 4795 - 4959
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  4795 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 4894  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4895 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctac 4959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 49 - 209
Target Start/End: Complemental strand, 5336 - 5179
Alignment:
Q  49 gacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgt 148  Q
    |||||||||||||||||||||||||||||||||  || |||||||||||||| || |||||||||| | || ||||||||  ||||||||||||||||||    
T  5336 gacttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcatttttgt 5237  T
Q  149 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||    || ||||| |  ||||| ||||||||| |||||||||||||||    
T  5236 tgcatttttcgtcct----cctattttcaaactccagaaacgcagaaaaatgacagttttag 5179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 141; Significance: 4e-74; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 19176833 - 19176669
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  19176833 cttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 19176734  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  19176733 catttttcgtcctaccccccattttattctccaaaaacgcagacaaatgacagttttagacctac 19176669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 40 - 215
Target Start/End: Complemental strand, 9930211 - 9930036
Alignment:
Q  40 taaaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattat 139  Q
    |||||| ||| |||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||    
T  9930211 taaaataaaggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactat 9930112  T
Q  140 catttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  9930111 catttttgttgcatttttcgtcctaccccccattttattctccaaaagcgcagagaaatgatagttttagacctac 9930036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 51 - 208
Target Start/End: Original strand, 41681136 - 41681292
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  41681136 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 41681235  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagtttta 208  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41681236 catttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagtttta 41681292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 42 - 215
Target Start/End: Original strand, 12571856 - 12572030
Alignment:
Q  42 aaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatca 141  Q
    ||||| || |||||||||||||||||||||||||||||||  |||||||||||||||| || ||||||||||| | |||||||||||| |||||||||||    
T  12571856 aaatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatca 12571955  T
Q  142 tttttgttgcatttttcgtcct-accccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12571956 tttttgttgcatttttcgtcctaaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 12572030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 31133222 - 31133386
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||||||||||||||||||   |||||||||||||||||| |||||||||||| | |||||||| ||||||||| ||||||||||||||    
T  31133222 cttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatcatttttgttg 31133321  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  31133322 catttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctac 31133386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 11656457 - 11656622
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||   ||||||||||||||||||||| |||||||||||    
T  11656457 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccatttttgttg 11656556  T
Q  151 catttttcgtcctaccccccattttattctcc-aaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  11656557 catttttcgtcctaccccccattttattctccaaaaaacgcagagaaatggcagttttagacctac 11656622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 44831788 - 44831624
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||| ||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||| | |||||||||||  ||||||||||||||||||||    
T  44831788 cttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattatcatttttgttg 44831689  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44831688 catttttggtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctac 44831624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 52 - 215
Target Start/End: Original strand, 33328161 - 33328324
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||||||||||||||||||||||||  |||||||||||||| || ||||||||||||| | |||||||||||||||||| |||||||||||||||    
T  33328161 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 33328260  T
Q  152 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||    
T  33328261 atttttcgtcctaccctcgattttattctccaaaaacgcaaagaaatgacagttttagacctac 33328324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 53 - 215
Target Start/End: Original strand, 13224645 - 13224806
Alignment:
Q  53 taattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgca 152  Q
    ||||||||||||||||| |||||||||||  ||||||||||||||||| ||||||||||||| | ||||||||  ||||||||||||||||||||||| |    
T  13224645 taattacacttttggtcttcgtgttttggcctactcacgaaactggtc-tgcccttttaaaacagaacaaaacaatccttcaattatcatttttgttgaa 13224743  T
Q  153 tttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13224744 tttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 13224806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 9178178 - 9178015
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  |||||||||||||| || |||||| |||||| | |||||||||||||||||| ||||||||||||||    
T  9178178 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatcatttttgttg 9178079  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||| || || |||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  9178078 catttttcatctta-cccccattttattctcaaaaaacgcagagaaatgacaattttagacctac 9178015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 13225182 - 13225023
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  13225182 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 13225083  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||    
T  13225082 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 13225023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 52 - 209
Target Start/End: Original strand, 9928912 - 9929070
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 9929011  T
Q  152 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    ||||||||||||||| ||  |||| |  ||||| ||||||||||||||| |||||||||    
T  9929012 atttttcgtcctacctccttttttcaaactccagaaacgcagagaaatgtcagttttag 9929070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 51 - 209
Target Start/End: Original strand, 19176292 - 19176451
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  19176292 cttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 19176391  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||| ||| || ||||| |  ||||| |||||||||||||||||| ||||||    
T  19176392 catttttcgtccgacctcctattttcaaactccagaaacgcagagaaatgacaattttag 19176451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 44831243 - 44831408
Alignment:
Q  45 ttaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcattt 144  Q
    ||||| |||||||||||||||||||||| ||||||||  ||||||||||| ||||||||||||||||||| | |||||||||||||||| ||||||||||    
T  44831243 ttaaggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcattt 44831342  T
Q  145 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||||||||| || ||||| |  ||||| |||||||||||||||| ||||||||    
T  44831343 ttgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgatagttttag 44831408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 40 - 209
Target Start/End: Complemental strand, 11657011 - 11656841
Alignment:
Q  40 taaaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattat 139  Q
    |||||| ||| |||||||||||||||||||||||||||||||  |||||||||||||||||| | |||||||||| | ||||||| ||||||||||||||    
T  11657011 taaaataaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattat 11656912  T
Q  140 catttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    ||||||||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||  |||||||||    
T  11656911 catttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatagcagttttag 11656841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 52 - 209
Target Start/End: Complemental strand, 12572393 - 12572235
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||| ||| ||||||||| | ||||||||||||||||||||||||||||||||||    
T  12572393 ttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12572294  T
Q  152 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    ||||||||||||||| || ||||| |  ||||| ||||||||||||||  |||||||||    
T  12572293 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaattgcagttttag 12572235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 51 - 207
Target Start/End: Complemental strand, 34541091 - 34540934
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||    
T  34541091 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttgttg 34540992  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttt 207  Q
    |||||||||||||||| || ||||| |  ||  | |||||||||||||||| ||||||    
T  34540991 catttttcgtcctacctcctattttcaaacttaagaaacgcagagaaatgatagtttt 34540934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 33328683 - 33328524
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||| ||| ||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  33328683 cttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcatttttgttg 33328584  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||| ||| |||||||| |  ||||| ||||||||||||||| |||||||||    
T  33328583 catttttcgtcccacctcccattttcaaactccagaaacgcagagaaatggcagttttag 33328524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 41681677 - 41681518
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  || |||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||    
T  41681677 cttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 41681578  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    ||||||||||||||||  | ||||| |  ||||| |||||||||||||||  ||||||||    
T  41681577 catttttcgtcctacctgctattttcaaactccagaaacgcagagaaatggtagttttag 41681518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 51 - 208
Target Start/End: Complemental strand, 31133763 - 31133605
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||| | |||||||||||||||||||||| ||||||||||    
T  31133763 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgttg 31133664  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 208  Q
    ||||||||||| |||| || ||||| |  ||||| ||| ||||||||||||| ||||||    
T  31133663 catttttcgtcatacctcctattttcaaactccagaaatgcagagaaatgacggtttta 31133605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 51 - 209
Target Start/End: Original strand, 33742924 - 33743082
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||| | ||| |||||||| ||||||||||||||||| ||    
T  33742924 cttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaac-aaacggtctttcaattatcatttttgatg 33743022  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||| || ||||| || | ||| |||||||||||||||||||||||||    
T  33743023 catttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 33743082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 96 - 215
Target Start/End: Complemental strand, 33743417 - 33743298
Alignment:
Q  96 tggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagaga 195  Q
    |||| ||||| |||||||| | |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33743417 tggttctgcctttttaaaacagaacaaaacggtttttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagaga 33743318  T
Q  196 aatgacagttttagacctac 215  Q
    ||| ||||||||||||||||    
T  33743317 aataacagttttagacctac 33743298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 52 - 215
Target Start/End: Complemental strand, 4630328 - 4630171
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||||||||| || |||||||||||  ||||||||||| |||||||||  |||||||| | || | |||||||||||||||||      ||||||    
T  4630328 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaattat------tgttgc 4630235  T
Q  152 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  4630234 atttttcatcctaccccccattttattctccaaaaacgcagaaaaatgacagttttagacctac 4630171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 51 - 203
Target Start/End: Original strand, 4629799 - 4629952
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||| |||||||  | ||||||||||||  || |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||    
T  4629799 cttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtcattcaattatcatttttattg 4629898  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacag 203  Q
    ||||||||||| |||| || ||||| |  ||||| ||||||| |||||||||||    
T  4629899 catttttcgtcttacctcctattttcaaactccagaaacgcaaagaaatgacag 4629952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 11337065 - 11336959
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||||||| ||||||||||| |||||||||||| |||||| |||||||||||| | || ||||||||| ||||||||||||||||||||    
T  11337065 cttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcatttttgttg 11336966  T
Q  151 cattttt 157  Q
    |||||||    
T  11336965 cattttt 11336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 52 - 187
Target Start/End: Original strand, 10918129 - 10918264
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||| |||| |||||||||||||| | ||||||||||| ||||| ||||   |||||| | | |||||  ||||||||| |||||||||||||||    
T  10918129 ttaattacattttttgtcctcgtgttttgatctactcacgaaattggtcttgcctccttaaaacagagcaaaattgtccttcaaatatcatttttgttgc 10918228  T
Q  152 atttttcgtcctaccccccattttattctccaaaaa 187  Q
    ||||||| || ||||||||||||||| |||||||||    
T  10918229 atttttcatcataccccccattttatcctccaaaaa 10918264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 128 - 190
Target Start/End: Original strand, 43958264 - 43958326
Alignment:
Q  128 tccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgc 190  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  43958264 tccttcaattatcatttttgttgcatttttcgtcctaccctctattttattctccaaaaacgc 43958326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 8074094 - 8073956
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||| ||| ||||||||||||||||||||||  || |||||||| || || || |||||||||| | |||||||   |||||||||||||| ||||||||    
T  8074094 cttagttatacttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaatcatccttcaattatca-ttttgttg 8073996  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgc 190  Q
    |||||| ||||  | |||||||||||  ||||||||||||    
T  8073995 cattttacgtcaaaacccccattttaccctccaaaaacgc 8073956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 209
Target Start/End: Original strand, 9177724 - 9177793
Alignment:
Q  141 atttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||||| ||| ||| |||||||| |  ||||| ||||| |||||||||||||||||||    
T  9177724 atttttgttgcatttttcatcccacctcccattttcaaactccagaaacgaagagaaatgacagttttag 9177793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 10919740 - 10919700
Alignment:
Q  40 taaaattaagacttaattacacttttggtcctcgtgttttg 80  Q
    |||||||||| |||||||| |||||||||||||||||||||    
T  10919740 taaaattaaggcttaattatacttttggtcctcgtgttttg 10919700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 81
Target Start/End: Original strand, 9177669 - 9177699
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttgg 81  Q
    |||||||||||||||||||||||||||||||    
T  9177669 cttaattacacttttggtcctcgtgttttgg 9177699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 43958208 - 43958254
Alignment:
Q  48 agacttaattacacttttggtcctcgtgttttggtttactcacgaaa 94  Q
    ||||||||||| |||||||||| |||||||||| | |||||||||||    
T  43958208 agacttaattatacttttggtcttcgtgttttgatctactcacgaaa 43958254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 137; Significance: 1e-71; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 1669 - 1833
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||| | ||||||| | |||||||||||||||||||||||    
T  1669 cttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatcatttttgttg 1768  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1769 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 1833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 2210 - 2051
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  2210 cttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 2111  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||| || ||||| |  ||||| |||||||||||||||| ||||||||    
T  2110 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 2051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 137; Significance: 1e-71; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 4750 - 4586
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||    
T  4750 cttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcatttttgttg 4651  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4650 catttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctac 4586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 88 - 209
Target Start/End: Original strand, 4242 - 4364
Alignment:
Q  88 cacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-attctccaaaa 186  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||| |  ||| ||||    
T  4242 cacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacctcctattttcaaactctaaaa 4341  T
Q  187 acgcagagaaatgacagttttag 209  Q
    | |||||||||||||||||||||    
T  4342 atgcagagaaatgacagttttag 4364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 137; Significance: 1e-71; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 43 - 215
Target Start/End: Original strand, 64296 - 64468
Alignment:
Q  43 aattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcat 142  Q
    ||||||| ||||||||||||||||||||||||||||||   |||||||||||||| ||||| |||||||||| | |||||||||||||||||||||||||    
T  64296 aattaaggcttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatcat 64395  T
Q  143 ttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  64396 ttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 64468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 52 - 164
Target Start/End: Complemental strand, 64847 - 64735
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||||||||||||    
T  64847 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattatcatttttgttgc 64748  T
Q  152 atttttcgtccta 164  Q
    |||||||||||||    
T  64747 atttttcgtccta 64735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 44 - 215
Target Start/End: Complemental strand, 205918 - 205748
Alignment:
Q  44 attaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatt 143  Q
    |||||| ||||||||||||||| ||||||   |||||    |||||||||| ||||||||||  ||| ||||  |||||||| |||| | || ||||||     
T  205918 attaagtcttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatg 205819  T
Q  144 tttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||| ||||| |||| |||||||  || |||||   ||||||||||||||||||||| |||||||||||||||    
T  205818 ttt-ttgcagttttagtcctacgtcctattttcaactccaaaaacgcagagaaatggcagttttagacctac 205748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 129; Significance: 6e-67; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 134216 - 134052
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| ||| ||||||||||| | | ||||||||| ||||||||||| |||||||||||    
T  134216 cttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacatttttgttg 134117  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  134116 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 134052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 128; Significance: 2e-66; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 48 - 211
Target Start/End: Original strand, 752 - 914
Alignment:
Q  48 agacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttg 147  Q
    |||||||||||||||||||||| |||||||||||  ||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||| |||||    
T  752 agacttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttg 850  T
Q  148 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagac 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  851 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagac 914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 51 - 212
Target Start/End: Complemental strand, 1284 - 1122
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  1284 cttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 1185  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagacc 212  Q
    ||| |||||||||||| || ||||| |  | ||| ||||||||| ||||| ||||||||||||    
T  1184 catctttcgtcctacctcctattttcaaaccccagaaacgcagaaaaatggcagttttagacc 1122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 120; Significance: 1e-61; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 52 - 215
Target Start/End: Complemental strand, 10414 - 10252
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||  | ||||||||||| | ||||||||||||||||||||||||||||||||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10315  T
Q  152 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||| |||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  10314 atttttcgtcctac-ccccattttattctccaaaaattcagagaaatgacagttttaaacctac 10252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 47 - 156
Target Start/End: Original strand, 9930 - 10039
Alignment:
Q  47 aagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcattttt 146  Q
    |||| ||||||||| |||||||||||||||||| |  || ||||||||||| || ||||||||||| ||| ||||||| |||||||||||||||| ||||    
T  9930 aagatttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtccttcaattatcaatttt 10029  T
Q  147 gttgcatttt 156  Q
    ||| ||||||    
T  10030 gttacatttt 10039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 118; Significance: 2e-60; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 42701 - 42538
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||| |||||||| |||||||||||||| |||||| ||||||| | |||||||||||||| | ||||||||||||||||| ||||||||||||||     
T  42701 cttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcatttttgttt 42602  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  42601 catttttcgtcctac-ccccattttattctccaaaaacgcagagaaatgacagttttagacctac 42538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 52 - 215
Target Start/End: Original strand, 42172 - 42336
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    |||||||||||||| || ||||||||||||| || ||||||||||| ||||||| |||||||| | |||||||||||| |||||||||||||||||||||    
T  42172 ttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatcatttttgttgc 42271  T
Q  152 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||| ||| |||| || ||||| |  || || |||||||||||||||||||||||||||||||    
T  42272 attttttgtcatacctcctattttcaaacttcagaaacgcagagaaatgacagttttagacctac 42336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 115; Significance: 1e-58; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 41 - 211
Target Start/End: Original strand, 18827 - 18996
Alignment:
Q  41 aaaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatc 140  Q
    ||||| ||| ||| |||||||||||||||||  ||||||||  ||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||    
T  18827 aaaataaaggcttcattacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatc 18926  T
Q  141 atttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagac 211  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  18927 atttttgttgcatttttcatccta-cccccattttattctccaaaaacgcagagaaataacagttttagac 18996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 51 - 146
Target Start/End: Complemental strand, 19164 - 19069
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcattttt 146  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||    
T  19164 cttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 108; Significance: 2e-54; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 68 - 211
Target Start/End: Original strand, 10640 - 10783
Alignment:
Q  68 tcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccc 167  Q
    ||||||||||||||  |||||| |||||||||||||||||||||||| | |||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  10640 tcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctaccc 10739  T
Q  168 cccattttattctccaaaaacgcagagaaatgacagttttagac 211  Q
     ||||||||||||||||||| |||||||||||||||||||||||    
T  10740 tccattttattctccaaaaatgcagagaaatgacagttttagac 10783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 11166 - 11007
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11166 cttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttg 11067  T
Q  151 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    |||||||||||||||| || ||||| |  ||| | ||||||||||||||  |||||||||    
T  11066 catttttcgtcctacctcctattttcaaactcgagaaacgcagagaaattgcagttttag 11007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 118 - 215
Target Start/End: Original strand, 16565 - 16662
Alignment:
Q  118 aacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 215  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16565 aacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctac 16662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 66 - 209
Target Start/End: Complemental strand, 17024 - 16880
Alignment:
Q  66 ggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttttcgtcctac 165  Q
    |||||||||||||||  ||||||||||||||| ||| ||| |||||||| | |||||||  |||||||||||||||||||||||||||||||||||||||    
T  17024 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 16925  T
Q  166 cccccatttt-attctccaaaaacgcagagaaatgacagttttag 209  Q
    | || ||||| |  ||||| |||||||||||||| ||||||||||    
T  16924 ctcctattttcaaactccagaaacgcagagaaattacagttttag 16880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 53 - 175
Target Start/End: Complemental strand, 28784 - 28662
Alignment:
Q  53 taattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgca 152  Q
    ||||||||||||||||| |||||||||||  |||| |||||||||||| ||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  28784 taattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgca 28685  T
Q  153 tttttcgtcctaccccccatttt 175  Q
     |||||||||| |||||||||||    
T  28684 gttttcgtccttccccccatttt 28662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 52 - 190
Target Start/End: Complemental strand, 62000 - 61862
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    ||||||||||||||| ||||||||||||||| ||||||||||| ||||||| ||||||||||||| |||||||   || ||||| |||||||||||||      
T  62000 ttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatcatttttgttat 61901  T
Q  152 atttttcgtcctaccccccattttattctccaaaaacgc 190  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  61900 atttttcgtcctaccccccattttgtcctccaaaaacgc 61862  T

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Target: scaffold0057; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 61030 - 61102
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaa 123  Q
    ||||| |||||||||| ||||||||||||||  ||||||||||| || ||||||| |||||||||| ||||||    
T  61030 cttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgccattttaaaatagaacaaa 61102  T

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Target: scaffold1585 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 51 - 191
Target Start/End: Original strand, 569 - 709
Alignment:
Q  51 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 150  Q
    |||||||||||||||| ||||||||||||||  ||||||||||| || || ||||||||||||| | |||||||| ||||||||||||||||||||||||    
T  569 cttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatcatttttgttg 668  T
Q  151 catttttcgtcctaccccccattttattctccaaaaacgca 191  Q
     ||||||||||  ||| ||||||| || |||||||||||||    
T  669 tatttttcgtctcacctcccatttgatcctccaaaaacgca 709  T

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Target: scaffold0076 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 52 - 152
Target Start/End: Complemental strand, 8551 - 8451
Alignment:
Q  52 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 151  Q
    |||||||||||||||||| || ||||||||| |||| |||||||||||||| ||||||||||| | | ||||||||||||||||||||||||||||||||    
T  8551 ttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatcatttttgttgc 8452  T
Q  152 a 152  Q
    |    
T  8451 a 8451  T

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Target: scaffold1696 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 53 - 190
Target Start/End: Original strand, 454 - 589
Alignment:
Q  53 taattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgca 152  Q
    |||||||| |||||||| |||||||||||  ||||||||||| ||||| ||  ||||||||| | |||| ||  ||||||||||||||||||||||||||    
T  454 taattaca-ttttggtcttcgtgttttggcctactcacgaaaatggtcatgatcttttaaaacaaaacataatcgtccttcaattatcatttttgttgca 552  T
Q  153 tttttcgtcctaccccccattttattctccaaaaacgc 190  Q
    |||||||||||| | |||||||||| ||| ||||||||    
T  553 tttttcgtccta-cacccattttatcctcaaaaaacgc 589  T

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Target: scaffold0168 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 98 - 191
Target Start/End: Complemental strand, 7784 - 7691
Alignment:
Q  98 gtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgca 191  Q
    ||||| ||||||||||| | |||||||| ||| |||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  7784 gtccttcccttttaaaacagaacaaaactgtcgttcagttatcatttttgttgcatttttcgtcctaccccctattttatcctccaaaaacgca 7691  T

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