View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5975_high_3 (Length: 726)
Name: NF5975_high_3
Description: NF5975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5975_high_3 |
 | |
|
| [»] scaffold0257 (1 HSPs) |
| | |
|
| [»] scaffold0922 (1 HSPs) |
| | |
|
| [»] scaffold1147 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0257 (Bit Score: 598; Significance: 0; HSPs: 1)
Name: scaffold0257
Description:
Target: scaffold0257; HSP #1
Raw Score: 598; E-Value: 0
Query Start/End: Original strand, 10 - 708
Target Start/End: Complemental strand, 20325 - 19627
Alignment:
| Q |
10 |
aatatttactgtttttcaattttaccttgtgaactcattagtttcctctgttcgtttgagaaaaatccaaactggatagtgacaataacggtgtttctaa |
109 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20325 |
aatatttactgtttttcaattttaccttgtgaactcattagtttcctctgttcgtttgagaaaaatccaaactggatagtgacaataacggtgtttctaa |
20226 |
T |
|
| Q |
110 |
atagtatctgatcgaatcgaagcattctgacccaacnnnnnnngctaagagattactacaattaaatgcaaacaaaatgaaggcattgctttgctagact |
209 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20225 |
atagtatctgatcgaatcaaagcattctgacccaactttttttgctaagagattactacaattaaatgcaaacaaaatgaaggcattgctttgctagact |
20126 |
T |
|
| Q |
210 |
gcaattgtaaggttctggttgatatataaatgtatgttcgagcaataaataaaatattcaaggataaagaaaatcagggaacttctagaatgcaacgnnn |
309 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
20125 |
gcaattgtaaggttttggttgatatataaatgtatgttcgagcaataaataaaatattcaaggataaagaaaatcagggaactgctagaatgcaacgaaa |
20026 |
T |
|
| Q |
310 |
nnnnntagtctaataaccaataggatcacttaaagcattccgagtttgtaaaatttttgcctcttgttgagtgatgctctgcaaaacagcttcagaggaa |
409 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20025 |
aaaaatagtttaataaccaataggatcacttaaagcaccccgagtttgtaaaatttgtgcctcttgttgagtgatgctctgcaaaacagcttcagaggaa |
19926 |
T |
|
| Q |
410 |
gccaattgatgcttaagatccttcacatgttgcgtcaagatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaaca |
509 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19925 |
gccaattgatgcttaagatccttcacatgttgcgtcaagatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaaca |
19826 |
T |
|
| Q |
510 |
aagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacac |
609 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
19825 |
aagcgcgcttttccacatcatccaaccatttcttatcaaaaccacatttgcgcacatcttgtagtaactcaacaaattcagagtggcttgaacctaacac |
19726 |
T |
|
| Q |
610 |
atccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcataacccttgtatctgctactcaatgaagtgtccttcaaacg |
708 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
19725 |
atccaacacactatgagtttggaggaatttcaatagctcagctaggcaattgtaggcataacccttgtatctgttactcaatgaagtgtccttcaaacg |
19627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 301; Significance: 1e-169; HSPs: 38)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 315 - 699
Target Start/End: Complemental strand, 28187579 - 28187195
Alignment:
| Q |
315 |
tagtctaataaccaataggatcacttaaagcattccgagtttgtaaaatttttgcctcttgttgagtgatgctctgcaaaacagcttcagaggaagccaa |
414 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| |||||| |||||||||| |||||| |||||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
28187579 |
tagtctaatagccaataggatcacttaaagcagcccgagtatgtaaaatttgtgcctcctgttgagtgatgttctgcaaaacagcttcacaggaagccaa |
28187480 |
T |
|
| Q |
415 |
ttgatgcttaagatccttcacatgttgcgtcaagatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcg |
514 |
Q |
| |
|
||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |
|
|
| T |
28187479 |
ttgatgcttaagatcctccacatgttgtgtcaaaatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgtaaaccaggcaacaaagcg |
28187380 |
T |
|
| Q |
515 |
cgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatcca |
614 |
Q |
| |
|
|| ||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
28187379 |
cgtttttcaatatcatccaaccattccttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagagtggcttgaacctaacacatcca |
28187280 |
T |
|
| Q |
615 |
acacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcataacccttgtatctgctactcaatgaagtgtc |
699 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
28187279 |
acacactatgagtttggaggaatttcaatagctcagctaggcagttgtaggcataacccttgtatctgttactcaatgaagtgtc |
28187195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 315 - 702
Target Start/End: Original strand, 17743718 - 17744105
Alignment:
| Q |
315 |
tagtctaataaccaataggatcacttaaagcattccgagtttgtaaaatttttgcctcttgttgagtgatgctctgcaaaacagcttcagaggaagccaa |
414 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
17743718 |
tagtctaatagccaataggatcacttaaagcagctcgagtttgtaaaatttgtgcctcctgttgagtgatgttctgcaaaacagcttcagaggaatccaa |
17743817 |
T |
|
| Q |
415 |
ttgatgcttaagatccttcacatgttgcgtcaagatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcg |
514 |
Q |
| |
|
|||||||||||||||| |||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
17743818 |
ttgatgcttaagatccatcacatgttgtgtcaaaatatgttttgagtccaacaatttttgcaatgcatcttgagagacttgtaaaccaggaaacaaagcg |
17743917 |
T |
|
| Q |
515 |
cgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatcca |
614 |
Q |
| |
|
|||||||| ||| ||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||| | |||||||||||||||||||| |
|
|
| T |
17743918 |
cgcttttcaacaccatccaaccatttcttatcaaaaggaaatctgcgcacatcttgtaataactcgacaaattcagagttgcttgaacctaacacatcca |
17744017 |
T |
|
| Q |
615 |
acacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcataacccttgtatctgctactcaatgaagtgtcctt |
702 |
Q |
| |
|
|||||||| | ||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
17744018 |
acacactacgagtttgaaggaatttcaatagctcagctaggcaattgtaggcataacccttgtatctgttactcaatgaagtgtcctt |
17744105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 315 - 702
Target Start/End: Original strand, 19045038 - 19045425
Alignment:
| Q |
315 |
tagtctaataaccaataggatcacttaaagcattccgagtttgtaaaatttttgcctcttgttgagtgatgctctgcaaaacagcttcagaggaagccaa |
414 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
19045038 |
tagtctaatagccaataggatcacttaaagcagctcgagtttgtaaaatttgtgcctcctgttgagtgatgttctgcaaaacagcttcagaggaatccaa |
19045137 |
T |
|
| Q |
415 |
ttgatgcttaagatccttcacatgttgcgtcaagatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcg |
514 |
Q |
| |
|
|||||||||||||||| |||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
19045138 |
ttgatgcttaagatccatcacatgttgtgtcaaaatatgttttgagtccaacaatttttgcaatgcatcttgagagacttgtaaaccaggaaacaaagcg |
19045237 |
T |
|
| Q |
515 |
cgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatcca |
614 |
Q |
| |
|
|||||||| ||| ||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||| | |||||||||||||||||||| |
|
|
| T |
19045238 |
cgcttttcaacaccatccaaccatttcttatcaaaaggaaatctgcgcacatcttgtaataactcgacaaattcagagttgcttgaacctaacacatcca |
19045337 |
T |
|
| Q |
615 |
acacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcataacccttgtatctgctactcaatgaagtgtcctt |
702 |
Q |
| |
|
|||||||| | ||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
19045338 |
acacactacgagtttgaaggaatttcaatagctcagctaggcaattgtaggcataacccttgtatctgttactcaatgaagtgtcctt |
19045425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 326 - 699
Target Start/End: Complemental strand, 28163558 - 28163185
Alignment:
| Q |
326 |
ccaataggatcacttaaagcattccgagtttgtaaaatttttgcctcttgttgagtgatgctctgcaaaacagcttcagaggaagccaattgatgcttaa |
425 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28163558 |
ccaataggatcacttaaagcagcccgagtttgtaaaatttgtgcctcctgttgagtgatgttctgcaaaacagcttcagaggaagccaattgatgcttaa |
28163459 |
T |
|
| Q |
426 |
gatccttcacatgttgcgtcaagatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccac |
525 |
Q |
| |
|
||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| | |
|
|
| T |
28163458 |
gatccgccacatgttgagtcaaaatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgtaaaccaggcaacaaagcgcgcttttcgat |
28163359 |
T |
|
| Q |
526 |
atcatccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgg |
625 |
Q |
| |
|
|||||||||||||| ||||| ||| |||| |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
28163358 |
atcatccaaccattccttatgaaatggaaatctgcgtgcatcttgtagtaactcaacaaattcagagtggcttgaacctaacacatccaacacactatga |
28163259 |
T |
|
| Q |
626 |
gtttggaggaatttcaatagatcagctaggcagttgtaggcataacccttgtatctgctactcaatgaagtgtc |
699 |
Q |
| |
|
|||||||||||||||||||| || ||||| || ||||||| |||||||||||||||| |||||||||||||||| |
|
|
| T |
28163258 |
gtttggaggaatttcaatagctccgctagacaattgtaggtataacccttgtatctgttactcaatgaagtgtc |
28163185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 412 - 708
Target Start/End: Complemental strand, 28058008 - 28057712
Alignment:
| Q |
412 |
caattgatgcttaagatccttcacatgttgcgtcaagatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaa |
511 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |
|
|
| T |
28058008 |
caattgatgcttaagatcctccacatgttgagtcaaaatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgtaaaccaggcaacaaa |
28057909 |
T |
|
| Q |
512 |
gcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacat |
611 |
Q |
| |
|
|||| ||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
28057908 |
acgcgtttttcaatatcatccaaccattccttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagagtggcttgaacctaacacat |
28057809 |
T |
|
| Q |
612 |
ccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcataacccttgtatctgctactcaatgaagtgtccttcaaacg |
708 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
28057808 |
ccaacacactatgagtttggaggaatttcaatagctcagctaggcaattgtaggcataacccttgtatctgttactcaatgaagtgtccttcaaacg |
28057712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 412 - 708
Target Start/End: Complemental strand, 28068433 - 28068137
Alignment:
| Q |
412 |
caattgatgcttaagatccttcacatgttgcgtcaagatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaa |
511 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |
|
|
| T |
28068433 |
caattgatgcttaagatcctccacatgttgagtcaaaatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgtaaaccaggcaacaaa |
28068334 |
T |
|
| Q |
512 |
gcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacat |
611 |
Q |
| |
|
|||| ||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
28068333 |
acgcgtttttcaatatcatccaaccattccttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagagtggcttgaacctaacacat |
28068234 |
T |
|
| Q |
612 |
ccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcataacccttgtatctgctactcaatgaagtgtccttcaaacg |
708 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
28068233 |
ccaacacactatgagtttggaggaatttcaatagctcagctaggcaattgtaggcataacccttgtatctgttactcaatgaagtgtccttcaaacg |
28068137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 315 - 700
Target Start/End: Complemental strand, 11422143 - 11421759
Alignment:
| Q |
315 |
tagtctaataaccaataggatcacttaaagcattccgagtttgtaaaatttttgcctcttgttgagtgatgctctgcaaaacagcttcagaggaagccaa |
414 |
Q |
| |
|
|||| ||||| || |||||||||||||||||| |||||||| ||||| || |||||| || |||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
11422143 |
tagtttaatagccgataggatcacttaaagcag-ccgagtttctaaaaattgtgcctcctgctgagtgatgctctgtaaaacagcttcggaggaagccaa |
11422045 |
T |
|
| Q |
415 |
ttgatgcttaagatccttcacatgttgcgtcaagatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcg |
514 |
Q |
| |
|
||||||||||||||||| ||| ||||| ||||| |||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
11422044 |
ttgatgcttaagatcctccacgtgttgagtcaaaatgtattttgagttcaacaatttttgcaatgcatcttgagagacttgtaaaccaggaaacaaagcg |
11421945 |
T |
|
| Q |
515 |
cgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatcca |
614 |
Q |
| |
|
|||||||| ||| |||||||||||| || |||||| |||| | ||||||||||||| ||||||||||||| ||| | |||||||||||||| || | |
|
|
| T |
11421944 |
cgcttttcaacaccatccaaccattctttgtcaaaaggaaatctacgcacatcttgtattaactcaacaaatgtagagtttcttgaacctaacacgtcta |
11421845 |
T |
|
| Q |
615 |
acacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcataacccttgtatctgctactcaatgaagtgtcc |
700 |
Q |
| |
|
||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11421844 |
acacactatgggtctggaggaatttcaatagctcagctaggcaattgtaggcataacccttgtatctgctactcaatgaagtgtcc |
11421759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 470 - 700
Target Start/End: Original strand, 8538478 - 8538708
Alignment:
| Q |
470 |
ttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatctt |
569 |
Q |
| |
|
||||||||||||| |||||||| |||| || |||||||||||||||||||||| ||| ||||||||| | ||||||||||||| |||| |||||||||| |
|
|
| T |
8538478 |
ttttgcaatgcattttgagagaattgtaaatcaggaaacaaagcgcgcttttcaacacgatccaaccaatccttatcaaaaccacattttcgcacatctt |
8538577 |
T |
|
| Q |
570 |
gtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcata |
669 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
8538578 |
gtaataactcaacaaattcagattggcttgaacctaacacatccaacacaatatgagtttggaggaatttcaatagctcagctagacagttgtaggcata |
8538677 |
T |
|
| Q |
670 |
acccttgtatctgctactcaatgaagtgtcc |
700 |
Q |
| |
|
||||||||||||| |||| | ||||| |||| |
|
|
| T |
8538678 |
acccttgtatctgttacttagtgaagcgtcc |
8538708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 469 - 700
Target Start/End: Complemental strand, 28152418 - 28152187
Alignment:
| Q |
469 |
tttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatct |
568 |
Q |
| |
|
|||||||||||||| |||||||| |||| || ||||||||||||||||| |||| |||||||||||||| | ||||||||| |||| | ||||||||| |
|
|
| T |
28152418 |
tttttgcaatgcattttgagagaattgtaaatcaggaaacaaagcgcgcatttcaacatcatccaaccactccttatcaaacggaaatctacgcacatct |
28152319 |
T |
|
| Q |
569 |
tgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcat |
668 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||| |||||||||||||| || ||||||| ||||||||||| |
|
|
| T |
28152318 |
tgtaataactcaacaaattcagagttgcttgaacctaacacatccaacacactatgagtttgaaggaatttcaatagctctgctaggctgttgtaggcat |
28152219 |
T |
|
| Q |
669 |
aacccttgtatctgctactcaatgaagtgtcc |
700 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
28152218 |
aacccttgtatctgctactcaatgaagtgtcc |
28152187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 470 - 700
Target Start/End: Complemental strand, 27920972 - 27920742
Alignment:
| Q |
470 |
ttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatctt |
569 |
Q |
| |
|
||||||||||||| || ||||| |||| | || || |||||||||||||||| ||| |||||||||| | |||||||||||| || |||||||||||| |
|
|
| T |
27920972 |
ttttgcaatgcattttcagagaattgtaattcatgagacaaagcgcgcttttcaacaccatccaaccaatctttatcaaaaccacatctgcgcacatctt |
27920873 |
T |
|
| Q |
570 |
gtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcata |
669 |
Q |
| |
|
||||||| |||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||| |||||| ||||||||||||||||||| ||| |
|
|
| T |
27920872 |
gtaataaatcaacaaattcagagtggcttgaacctaacacatccaacgcactatgagtttggaggaatcgcaatagctcagctaggcagttgtaggaata |
27920773 |
T |
|
| Q |
670 |
acccttgtatctgctactcaatgaagtgtcc |
700 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |
|
|
| T |
27920772 |
acccttgtatctgctactcagtgaagtgtcc |
27920742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 462 - 700
Target Start/End: Complemental strand, 27954949 - 27954711
Alignment:
| Q |
462 |
ccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcg |
561 |
Q |
| |
|
|||||| |||||||||||||| |||||||| |||| | || | |||||||| ||||||| ||| |||||||||| | |||||||||||| || |||| |
|
|
| T |
27954949 |
ccaacagtttttgcaatgcattttgagagaattgtaattcataagacaaagcgtgcttttcaacaccatccaaccaatctttatcaaaaccacatctgcg |
27954850 |
T |
|
| Q |
562 |
cacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttg |
661 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||| |||||| ||||||||||||||| |
|
|
| T |
27954849 |
cacatcttgtaataaatcaacaaattcagagtggcttgaacctaacacatccaacgcactatgagtttggaggaatcgcaatagctcagctaggcagttg |
27954750 |
T |
|
| Q |
662 |
taggcataacccttgtatctgctactcaatgaagtgtcc |
700 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||||||| |
|
|
| T |
27954749 |
taggaataacccttgtatctgctactccatgaagtgtcc |
27954711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 470 - 708
Target Start/End: Complemental strand, 28038277 - 28038039
Alignment:
| Q |
470 |
ttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatctt |
569 |
Q |
| |
|
||||||||||||| |||||||| || | || ||||||||||||| |||||||| ||| |||| ||||| | ||||| |||| | || |||||||||||| |
|
|
| T |
28038277 |
ttttgcaatgcattttgagagaattttaaatcaggaaacaaagcacgcttttcgacaccatcaaaccaatctttatcgaaactacatctgcgcacatctt |
28038178 |
T |
|
| Q |
570 |
gtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcata |
669 |
Q |
| |
|
|||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||| |
|
|
| T |
28038177 |
gtaacaactcaacaaattcagtgtggcttgaacctaacacatccaacacactatgcgtttggaggaatttcaatagatcgactaggcagttgtaagcata |
28038078 |
T |
|
| Q |
670 |
acccttgtatctgctactcaatgaagtgtccttcaaacg |
708 |
Q |
| |
|
|| ||||||||| |||||||| |||||||||| ||||| |
|
|
| T |
28038077 |
actcttgtatcttttactcaattaagtgtcctttaaacg |
28038039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 518 - 702
Target Start/End: Original strand, 27430393 - 27430577
Alignment:
| Q |
518 |
ttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaaca |
617 |
Q |
| |
|
||||| ||| |||||||||||| |||||||||| |||| | |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
27430393 |
ttttcaacaccatccaaccattccttatcaaaaggaaatctacgcacatcttgtaataactcaacaaattcagagtggcttgaacctaccacatccaaca |
27430492 |
T |
|
| Q |
618 |
cactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcataacccttgtatctgctactcaatgaagtgtcctt |
702 |
Q |
| |
|
|| |||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |
|
|
| T |
27430493 |
cattatgtggttggaggaatttcaatagctcagctaggcagttgtaggcataacccttgtatctgttactcaatgaagggtcctt |
27430577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 565 - 702
Target Start/End: Original strand, 18078689 - 18078826
Alignment:
| Q |
565 |
atcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtag |
664 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
18078689 |
atcttgtaataactcaacaaattcagaatggcttgaacctaacacatccaacacattatgcgtttggaggaatttcaatagctcagctaggcaattgtag |
18078788 |
T |
|
| Q |
665 |
gcataacccttgtatctgctactcaatgaagtgtcctt |
702 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
18078789 |
gcataacccttgtatctgttactcaatgaagtgtcctt |
18078826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 469 - 706
Target Start/End: Complemental strand, 27777307 - 27777070
Alignment:
| Q |
469 |
tttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatct |
568 |
Q |
| |
|
|||||| |||||| ||||||||| |||| | ||| ||||||||| || ||||| ||| |||||||||| | |||||||||||| || |||| |||||| |
|
|
| T |
27777307 |
tttttgtaatgcaacttgagagaattgtatatcagaaaacaaagcacgtttttcaacaccatccaaccaatctttatcaaaaccacatctgcgtacatct |
27777208 |
T |
|
| Q |
569 |
tgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcat |
668 |
Q |
| |
|
|||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| || |||||||||| || |
|
|
| T |
27777207 |
tgtaataactcatcaaactcagagcggcttgaacctaacacatccaacacactatggttttggaggaatttcaatagctcagcaagacagttgtaggaat |
27777108 |
T |
|
| Q |
669 |
aacccttgtatctgctactcaatgaagtgtccttcaaa |
706 |
Q |
| |
|
||| ||||||||| |||||| |||||||||| ||||| |
|
|
| T |
27777107 |
aactcttgtatctattactcagtgaagtgtccctcaaa |
27777070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 470 - 688
Target Start/End: Complemental strand, 30994099 - 30993885
Alignment:
| Q |
470 |
ttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatctt |
569 |
Q |
| |
|
||||||||||||| |||||||| |||| || ||||||| ||||| |||||||| ||| |||||||| | || |||||| |||| | ||| |||| |
|
|
| T |
30994099 |
ttttgcaatgcattttgagagaattgtaaatcaggaaataaagcacgcttttcgacactgtccaaccaat----attgaaaccacatttccacacttctt |
30994004 |
T |
|
| Q |
570 |
gtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcata |
669 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
30994003 |
ctaataactcaacaaattcagagtggcttgaacctaacacatccaacacacaatgcgtttggaggaatttcaatagatcagctagacagttgtaggcata |
30993904 |
T |
|
| Q |
670 |
acccttgtatctgctactc |
688 |
Q |
| |
|
|||||| |||||| ||||| |
|
|
| T |
30993903 |
acccttatatctgttactc |
30993885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 461 - 708
Target Start/End: Original strand, 26203977 - 26204224
Alignment:
| Q |
461 |
tccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgc |
560 |
Q |
| |
|
||||| ||||| ||||| |||||||| || |||||| | |||| |||||||| ||| |||| ||| |||||||||| | ||||||||||||||| || |
|
|
| T |
26203977 |
tccaataatttctgcaaggcatcttgtgatacttgtatatcagggaacaaagcccgcctttcgacaccatccaaccaatccttatcaaaaccaaagctgt |
26204076 |
T |
|
| Q |
561 |
gcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagtt |
660 |
Q |
| |
|
|| |||||||||||||||| | ||||||||| ||| ||| ||||| || ||||| ||| ||||||||| ||||||||||||||| |||||||| | || |
|
|
| T |
26204077 |
gcgcatcttgtaataactccagaaattcagagtggaatgagcctaatacttccaatacattatgggttttgaggaatttcaatagttcagctagtaaatt |
26204176 |
T |
|
| Q |
661 |
gtaggcataacccttgtatctgctactcaatgaagtgtccttcaaacg |
708 |
Q |
| |
|
||||||| ||||||||||||| |||| | ||||||||| || ||||| |
|
|
| T |
26204177 |
gtaggcacaacccttgtatctattactaagtgaagtgtcttttaaacg |
26204224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 501 - 706
Target Start/End: Original strand, 28508432 - 28508637
Alignment:
| Q |
501 |
caggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttga |
600 |
Q |
| |
|
||||||||||||||||| | || ||| |||||||||| | ||||||||||||||| ||||| ||||||||| |||||| ||||||| ||| |||| || |
|
|
| T |
28508432 |
caggaaacaaagcgcgcctctcaacaccatccaaccaatccttatcaaaaccaaagctgcgcgcatcttgtattaactccacaaatttagagtggcacga |
28508531 |
T |
|
| Q |
601 |
acctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcataacccttgtatctgctactcaatgaagtgtcc |
700 |
Q |
| |
|
|| || || ||||||| ||||||||||| |||||||||||||| |||||||| | ||||||||| ||||||||||||| |||| | || ||||||| |
|
|
| T |
28508532 |
ccccaatacttccaacatactatgggtttcaaggaatttcaatagttcagctagtaaattgtaggcacaacccttgtatctattactaagtgcagtgtcc |
28508631 |
T |
|
| Q |
701 |
ttcaaa |
706 |
Q |
| |
|
|||||| |
|
|
| T |
28508632 |
ttcaaa |
28508637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 461 - 708
Target Start/End: Original strand, 26109685 - 26109932
Alignment:
| Q |
461 |
tccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgc |
560 |
Q |
| |
|
||||| ||||| ||||| |||||||| || |||||| | |||| |||||||| ||| |||| ||| |||||||||| | ||||||||||||||| || |
|
|
| T |
26109685 |
tccaataatttctgcaaggcatcttgtgatacttgtatatcagggaacaaagcccgcctttcgacaccatccaaccaatccttatcaaaaccaaagctgt |
26109784 |
T |
|
| Q |
561 |
gcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagtt |
660 |
Q |
| |
|
|| |||||||||||||||| | ||||||||| ||| ||| ||||| | ||||| | | ||||||||| ||||||||||||||| |||||||| | || |
|
|
| T |
26109785 |
gcgcatcttgtaataactccataaattcagagtggtatgatcctaattcttccaatatattatgggttttgaggaatttcaatagttcagctagtaaatt |
26109884 |
T |
|
| Q |
661 |
gtaggcataacccttgtatctgctactcaatgaagtgtccttcaaacg |
708 |
Q |
| |
|
||||||| ||||||||||||| |||| | ||||||||| || ||||| |
|
|
| T |
26109885 |
gtaggcacaacccttgtatctattactaagtgaagtgtcttttaaacg |
26109932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 326 - 416
Target Start/End: Complemental strand, 28060308 - 28060218
Alignment:
| Q |
326 |
ccaataggatcacttaaagcattccgagtttgtaaaatttttgcctcttgttgagtgatgctctgcaaaacagcttcagaggaagccaatt |
416 |
Q |
| |
|
||||||||||||| ||||||| ||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
28060308 |
ccaataggatcacataaagcagcccgagtttgtaaaatttgtgcctcctgttgagtgatgttctgcaaaacagcttcagaggaagccaatt |
28060218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 326 - 416
Target Start/End: Complemental strand, 28070733 - 28070643
Alignment:
| Q |
326 |
ccaataggatcacttaaagcattccgagtttgtaaaatttttgcctcttgttgagtgatgctctgcaaaacagcttcagaggaagccaatt |
416 |
Q |
| |
|
||||||||||||| ||||||| ||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
28070733 |
ccaataggatcacataaagcagcccgagtttgtaaaatttgtgcctcctgttgagtgatgttctgcaaaacagcttcagaggaagccaatt |
28070643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 501 - 708
Target Start/End: Original strand, 26232069 - 26232276
Alignment:
| Q |
501 |
caggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttga |
600 |
Q |
| |
|
||||| |||||| |||| |||| ||| |||||||||| | ||||||||||||||| | || |||||||||||||||| |||||||||| ||| ||| |
|
|
| T |
26232069 |
caggacacaaagtgcgcctttcgacaccatccaaccaatccttatcaaaaccaaaccttcgtgcatcttgtaataactcctcaaattcagagtggaatga |
26232168 |
T |
|
| Q |
601 |
acctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcataacccttgtatctgctactcaatgaagtgtcc |
700 |
Q |
| |
|
|| || || |||||||||||||| |||| ||||||||||| ||| ||||||| | ||||||||| ||||||||||||| |||| | ||||||||| |
|
|
| T |
26232169 |
gcccaatacttccaacacactatgagttttgaggaatttcagtagttcagctaataaattgtaggcacaacccttgtatctattactaagtgaagtgtct |
26232268 |
T |
|
| Q |
701 |
ttcaaacg |
708 |
Q |
| |
|
|| ||||| |
|
|
| T |
26232269 |
tttaaacg |
26232276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 521 - 708
Target Start/End: Original strand, 28479269 - 28479456
Alignment:
| Q |
521 |
tccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacac |
620 |
Q |
| |
|
|||||| |||||||||| | |||||| |||||||| ||||| |||||||||||||||| ||||||| ||| |||| | || || || |||||||||| |
|
|
| T |
28479269 |
tccacaccatccaaccaatccttatctaaaccaaagctgcgcgcatcttgtaataactccacaaatttagagtggcacggccccaatacttccaacacac |
28479368 |
T |
|
| Q |
621 |
tatgggtttggaggaatttcaatagatcagctaggcagttgtaggcataacccttgtatctgctactcaatgaagtgtccttcaaacg |
708 |
Q |
| |
|
||||||||| |||||||||||||| || ||||| | ||||||||| ||||||||||||| |||||| || | ||||||| ||||| |
|
|
| T |
28479369 |
tatgggtttcaaggaatttcaatagttcggctagtaaattgtaggcacaacccttgtatctattactcagtgcaatgtcctttaaacg |
28479456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 501 - 679
Target Start/End: Original strand, 26138609 - 26138787
Alignment:
| Q |
501 |
caggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttga |
600 |
Q |
| |
|
||||||||||||| ||| |||| ||| |||||||||| | ||||||||||||||| | || |||||||||||||||| ||||||||||| ||| || |
|
|
| T |
26138609 |
caggaaacaaagcccgcctttcgacaccatccaaccaatccttatcaaaaccaaagcttcgtgcatcttgtaataactccacaaattcagagtggaatgt |
26138708 |
T |
|
| Q |
601 |
acctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcataacccttgtat |
679 |
Q |
| |
|
|| || || ||||| | ||||||||||| ||||||||||||||| | |||||| |||||||||| ||||||||||| |
|
|
| T |
26138709 |
gcccaatacttccaatatactatgggttttgaggaatttcaatagtttagctagtacgttgtaggcacaacccttgtat |
26138787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 541 - 702
Target Start/End: Original strand, 27458261 - 27458422
Alignment:
| Q |
541 |
cttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttc |
640 |
Q |
| |
|
|||||||||| |||| |||| |||||||||||||||| |||||||| ||| |||||||||| |||||||| ||||||||||||||||| || |||| |
|
|
| T |
27458261 |
cttatcaaaagcaaagctgcgtacatcttgtaataacttaacaaatttagagcggcttgaacccaacacatcaaacacactatgggtttgaagaaattgt |
27458360 |
T |
|
| Q |
641 |
aatagatcagctaggcagttgtaggcataacccttgtatctgctactcaatgaagtgtcctt |
702 |
Q |
| |
|
|| || ||||| || ||| ||| ||||||||||||||||| |||||| ||| |||||||| |
|
|
| T |
27458361 |
aacagctcagcgagacagccgtaagcataacccttgtatctattactcagtgatgtgtcctt |
27458422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 480 - 708
Target Start/End: Original strand, 26126481 - 26126709
Alignment:
| Q |
480 |
catcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactc |
579 |
Q |
| |
|
|||||||||||||||| | ||||| |||||| || | |||| ||| |||||||||| | ||||||||||||||| | || |||||||||||||||| |
|
|
| T |
26126481 |
catcttgagagacttgcatatcaggacacaaagtgctcctttcgacaccatccaaccaatccttatcaaaaccaaaccttcgtgcatcttgtaataactc |
26126580 |
T |
|
| Q |
580 |
aacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcataacccttgtat |
679 |
Q |
| |
|
|||||||||| ||| ||| || || || ||||||||||| ||||||| ||| |||||||| || |||||||| | ||||| ||| ||||||||||| |
|
|
| T |
26126581 |
ctcaaattcagagtggaatgaccccaatacttccaacacactgtgggttttgagaaatttcaacagttcagctagtaaattgtaagcacaacccttgtat |
26126680 |
T |
|
| Q |
680 |
ctgctactcaatgaagtgtccttcaaacg |
708 |
Q |
| |
|
|| |||| | ||||||||| || ||||| |
|
|
| T |
26126681 |
ctattactaagtgaagtgtcttttaaacg |
26126709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 480 - 708
Target Start/End: Original strand, 26176532 - 26176760
Alignment:
| Q |
480 |
catcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactc |
579 |
Q |
| |
|
|||||||||| ||||| | ||||| |||||| || | |||| ||| |||||||||| | ||||||||||||||| | || |||||||||||||||| |
|
|
| T |
26176532 |
catcttgagaaacttgcatatcaggacacaaagtgctcctttcgacaccatccaaccaatccttatcaaaaccaaaccttcgtgcatcttgtaataactc |
26176631 |
T |
|
| Q |
580 |
aacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcataacccttgtat |
679 |
Q |
| |
|
|||||||||| ||| ||| || || || ||||||||||| ||||||| |||||||||||| || |||||||| | ||||| ||| ||||||||||| |
|
|
| T |
26176632 |
ctcaaattcagagtggaatgagcccaatacttccaacacactgtgggttttgaggaatttcaacagttcagctagtaaattgtaagcacaacccttgtat |
26176731 |
T |
|
| Q |
680 |
ctgctactcaatgaagtgtccttcaaacg |
708 |
Q |
| |
|
|| |||| | ||||||||| || ||||| |
|
|
| T |
26176732 |
ctattactaagtgaagtgtctttaaaacg |
26176760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 461 - 645
Target Start/End: Complemental strand, 28137091 - 28136907
Alignment:
| Q |
461 |
tccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgc |
560 |
Q |
| |
|
||||| |||||||||| || |||||||| | |||| | ||||||||| ||| ||| |||| ||| ||||||||| | ||||||||||||||| |||| |
|
|
| T |
28137091 |
tccaataatttttgcatggcgtcttgagatatttgtatatcaggaaacatagcccgcctttcgacactatccaaccaatccttatcaaaaccaaagttgc |
28136992 |
T |
|
| Q |
561 |
gcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatag |
645 |
Q |
| |
|
|| ||||| ||| || || ||||||||||| |||| ||| ||||| |||||||| |||||||| |||| |||||||||||||| |
|
|
| T |
28136991 |
gcgcatctagtagtagatccacaaattcagagtggcatgagcctaatacatccaagacactatgagtttcaaggaatttcaatag |
28136907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 369 - 440
Target Start/End: Original strand, 26126307 - 26126378
Alignment:
| Q |
369 |
cctcttgttgagtgatgctctgcaaaacagcttcagaggaagccaattgatgcttaagatccttcacatgtt |
440 |
Q |
| |
|
||||||||||| |||| |||| ||||||||||| |||||| |||||||||||||||||| | | |||||||| |
|
|
| T |
26126307 |
cctcttgttgattgatactctccaaaacagcttgagaggatgccaattgatgcttaagaacttccacatgtt |
26126378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 369 - 440
Target Start/End: Original strand, 26176358 - 26176429
Alignment:
| Q |
369 |
cctcttgttgagtgatgctctgcaaaacagcttcagaggaagccaattgatgcttaagatccttcacatgtt |
440 |
Q |
| |
|
||||||||||| |||| |||| ||||||||||| |||||| |||||||||||||||||| | | |||||||| |
|
|
| T |
26176358 |
cctcttgttgattgatactctccaaaacagcttgagaggatgccaattgatgcttaagaacttccacatgtt |
26176429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 368 - 441
Target Start/End: Original strand, 28479101 - 28479174
Alignment:
| Q |
368 |
gcctcttgttgagtgatgctctgcaaaacagcttcagaggaagccaattgatgcttaagatccttcacatgttg |
441 |
Q |
| |
|
|||||||||||| |||| ||| |||||||||||||||||| | |||||| ||||||||||| | ||||||||| |
|
|
| T |
28479101 |
gcctcttgttgaatgatagtctccaaaacagcttcagaggatgtcaattgttgcttaagatcttccacatgttg |
28479174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 369 - 429
Target Start/End: Original strand, 28508237 - 28508297
Alignment:
| Q |
369 |
cctcttgttgagtgatgctctgcaaaacagcttcagaggaagccaattgatgcttaagatc |
429 |
Q |
| |
|
||||||||||| |||| |||| |||||||||||||||||| | |||||| ||||||||||| |
|
|
| T |
28508237 |
cctcttgttgaatgatactctccaaaacagcttcagaggatgtcaattgttgcttaagatc |
28508297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 461 - 555
Target Start/End: Complemental strand, 27357015 - 27356921
Alignment:
| Q |
461 |
tccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaa |
555 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| | | | | ||||||||| || |||| ||| ||||||||| | ||||||||||||||| |
|
|
| T |
27357015 |
tccaacagtttttgcaatgcatcttgagagacttttatatccgaaaacaaagcacgtctttcaacactatccaaccaatccttatcaaaaccaaa |
27356921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 529 - 574
Target Start/End: Complemental strand, 8549753 - 8549708
Alignment:
| Q |
529 |
atccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaat |
574 |
Q |
| |
|
||||||||| | ||||||||||||| |||||||||||||||||||| |
|
|
| T |
8549753 |
atccaaccaatccttatcaaaaccacatttgcgcacatcttgtaat |
8549708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 368 - 441
Target Start/End: Complemental strand, 28137226 - 28137153
Alignment:
| Q |
368 |
gcctcttgttgagtgatgctctgcaaaacagcttcagaggaagccaattgatgcttaagatccttcacatgttg |
441 |
Q |
| |
|
|||||||||||| | || ||| ||||||||||| |||||| | |||||||||||||||||| | ||||||||| |
|
|
| T |
28137226 |
gcctcttgttgaattatattcttcaaaacagctttagaggatgtcaattgatgcttaagatcttccacatgttg |
28137153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 336 - 429
Target Start/End: Complemental strand, 28152593 - 28152500
Alignment:
| Q |
336 |
cacttaaagcattccgagtttgtaaaatttttgcctcttgttgagtgatgctctgcaaaacagcttcagaggaagccaattgatgcttaagatc |
429 |
Q |
| |
|
||||||||||| | ||||| |||||||||||| | |||||| |||| ||| |||| ||||||||||||| | |||||||||||||||||| |
|
|
| T |
28152593 |
cacttaaagcagccttagtttctaaaatttttgctttctgttgaatgatagtctccaaatcagcttcagaggatgtcaattgatgcttaagatc |
28152500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 369 - 440
Target Start/End: Original strand, 26231874 - 26231945
Alignment:
| Q |
369 |
cctcttgttgagtgatgctctgcaaaacagcttcagaggaagccaattgatgcttaagatccttcacatgtt |
440 |
Q |
| |
|
||||||||||| |||| |||| ||||| ||||| |||||| | |||||||||||||||| | | |||||||| |
|
|
| T |
26231874 |
cctcttgttgattgatactctccaaaatagcttgagaggatgtcaattgatgcttaagaacttccacatgtt |
26231945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 352 - 441
Target Start/End: Complemental strand, 27357166 - 27357077
Alignment:
| Q |
352 |
agtttgtaaaatttttgcctcttgttgagtgatgctctgcaaaacagcttcagaggaagccaattgatgcttaagatccttcacatgttg |
441 |
Q |
| |
|
||||| ||||| || |||||||| |||| |||| |||| |||||||| ||||||| | || ||||||||||||||| | ||||||||| |
|
|
| T |
27357166 |
agtttctaaaacttgtgcctcttcttgaatgatactcttcaaaacagtctcagaggttgtcagttgatgcttaagatcttccacatgttg |
27357077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 249; Significance: 1e-138; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 241 - 698
Target Start/End: Complemental strand, 8021830 - 8021369
Alignment:
| Q |
241 |
gtatgttcgagcaataaataaaatattcaaggataaagaaaatcagggaacttctagaatgcaacgnnnnnnnntagtctaataaccaataggatcactt |
340 |
Q |
| |
|
|||||| |||||||||||||||||||| |||||||||||||| |||||||| | |||||||||| |||||||||||| || |||||||||| |
|
|
| T |
8021830 |
gtatgtccgagcaataaataaaatattgaaggataaagaaaagcagggaacaaattgaatgcaacgaaaaaaa-tagtctaataactaagaggatcactt |
8021732 |
T |
|
| Q |
341 |
aaagcattccgagtttgtaaaatttttgcctcttgttgagtgatgctctgcaaaacagcttcagaggaagccaattgatgcttaagatccttc-acatgt |
439 |
Q |
| |
|
||||||| ||| ||| ||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||| || |
|
|
| T |
8021731 |
aaagcatcccgtgttcgtaaaatttgtgcctcctgttgagtgatgctctgcaaatcagcttcagaggaagccaattgatgcttaagatacttccacacgt |
8021632 |
T |
|
| Q |
440 |
tgcgtcaagatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatt |
539 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||| | |||||||||||||| |
|
|
| T |
8021631 |
tgtgtcaagatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgcgaaccatgaaacaaagcacgcttttcgatatcatccaaccatt |
8021532 |
T |
|
| Q |
540 |
tcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaattt |
639 |
Q |
| |
|
|||||||||| ||| || | ||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||| |
|
|
| T |
8021531 |
ccttatcaaaaggaaaactgtgtacatcttgtaataactcgataaattcagagaggcttgaacctaacacatccaacacactatgagtttgaaggaattt |
8021432 |
T |
|
| Q |
640 |
caatagatcagctaggcagttgtaggcat----aacccttgtatctgctactcaatgaagtgt |
698 |
Q |
| |
|
|||||| || ||||| ||||||||||||| |||||||||||| ||||||||||||||||| |
|
|
| T |
8021431 |
caatagctcggctagacagttgtaggcataaccaacccttgtatcggctactcaatgaagtgt |
8021369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 461 - 700
Target Start/End: Complemental strand, 22400929 - 22400690
Alignment:
| Q |
461 |
tccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgc |
560 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| | | | | ||||||||| || |||| ||| ||||||||| | ||||||||||||||| ||| |
|
|
| T |
22400929 |
tccaacagtttttgcaatgcatcttgagagacttttatatccgaaaacaaagcacgtctttcaacactatccaaccaatccttatcaaaaccaaagctgc |
22400830 |
T |
|
| Q |
561 |
gcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagtt |
660 |
Q |
| |
|
||| || |||| || || ||| |||||||| || ||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||| || | |
|
|
| T |
22400829 |
gcaaattgtgtagtagcttaacgaattcagagtgacttgaacctaacacatctagcacactatgggtttggaggaattgtaatagatcagctagacaagt |
22400730 |
T |
|
| Q |
661 |
gtaggcataacccttgtatctgctactcaatgaagtgtcc |
700 |
Q |
| |
|
||| ||||||| ||||||||| |||||| |||||||||| |
|
|
| T |
22400729 |
gtatgcataacacttgtatctagtactcagtgaagtgtcc |
22400690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 461 - 700
Target Start/End: Complemental strand, 22966106 - 22965867
Alignment:
| Q |
461 |
tccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgc |
560 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| | | | | ||||||||| || |||| ||| ||||||||| | ||||||||||||||| ||| |
|
|
| T |
22966106 |
tccaacagtttttgcaatgcatcttgagagacttttatatccgaaaacaaagcacgtctttcaacactatccaaccaatccttatcaaaaccaaagctgc |
22966007 |
T |
|
| Q |
561 |
gcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagtt |
660 |
Q |
| |
|
||| || |||| || || ||| |||||||| || |||||| |||||||||| | ||||||||||||||||||||||| ||||| |||||||| || | |
|
|
| T |
22966006 |
gcaaattgtgtagtagcttaacgaattcagaatgacttgaagctaacacatctagcacactatgggtttggaggaattgtaatagctcagctagacaagt |
22965907 |
T |
|
| Q |
661 |
gtaggcataacccttgtatctgctactcaatgaagtgtcc |
700 |
Q |
| |
|
||| ||||||| ||||||||| |||||| |||||||||| |
|
|
| T |
22965906 |
gtatgcataacacttgtatctagtactcagtgaagtgtcc |
22965867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 461 - 651
Target Start/End: Complemental strand, 22792633 - 22792443
Alignment:
| Q |
461 |
tccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgc |
560 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| | | | | ||||||||| || |||| ||| ||||||||| | ||||||||||||||| | | |
|
|
| T |
22792633 |
tccaacagtttttgcaatgcatcttgagagacttttatatccgaaaacaaagcacgtctttcaacactatccaaccaatccttatcaaaaccaaagctac |
22792534 |
T |
|
| Q |
561 |
gcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagc |
651 |
Q |
| |
|
||| || |||| || || || |||||||| || ||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
22792533 |
gcaaattgtgtagtagcttaatgaattcagagtgacttgaacctaacacatccagcacactatgggtttggaggaattgtaatagctcagc |
22792443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 315 - 441
Target Start/End: Complemental strand, 22792821 - 22792695
Alignment:
| Q |
315 |
tagtctaataaccaataggatcacttaaagcattccgagtttgtaaaatttttgcctcttgttgagtgatgctctgcaaaacagcttcagaggaagccaa |
414 |
Q |
| |
|
||||||||||||||| ||| |||| |||| | | ||||| ||||| || |||||||| |||| |||| |||| |||||||| ||||||| | || |
|
|
| T |
22792821 |
tagtctaataaccaagaggggcactgaaagtagccttagtttctaaaacttgtgcctcttcttgaatgatactcttcaaaacagtctcagaggttgtcag |
22792722 |
T |
|
| Q |
415 |
ttgatgcttaagatccttcacatgttg |
441 |
Q |
| |
|
||||||||||||||| | ||||||||| |
|
|
| T |
22792721 |
ttgatgcttaagatcttccacatgttg |
22792695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 315 - 441
Target Start/End: Complemental strand, 22966294 - 22966168
Alignment:
| Q |
315 |
tagtctaataaccaataggatcacttaaagcattccgagtttgtaaaatttttgcctcttgttgagtgatgctctgcaaaacagcttcagaggaagccaa |
414 |
Q |
| |
|
||||||||||||||| ||| |||| |||| | | ||||| ||||| || |||||||| |||| |||| |||| |||||||| ||||||| | || |
|
|
| T |
22966294 |
tagtctaataaccaagaggggcactgaaagtagccttagtttctaaaacttgtgcctcttcttgaatgatactcttcaaaacagtctcagaggttgtcag |
22966195 |
T |
|
| Q |
415 |
ttgatgcttaagatccttcacatgttg |
441 |
Q |
| |
|
||||||||||||||| | ||||||||| |
|
|
| T |
22966194 |
ttgatgcttaagatcttccacatgttg |
22966168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 352 - 441
Target Start/End: Complemental strand, 22401080 - 22400991
Alignment:
| Q |
352 |
agtttgtaaaatttttgcctcttgttgagtgatgctctgcaaaacagcttcagaggaagccaattgatgcttaagatccttcacatgttg |
441 |
Q |
| |
|
||||| ||||| || |||||||| |||| |||| |||| |||||||| ||||||| | || ||||||||||||||| | ||||||||| |
|
|
| T |
22401080 |
agtttctaaaacttgtgcctcttcttgaatgatactcttcaaaacagtctcagaggttgtcagttgatgcttaagatcttccacatgttg |
22400991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0922 (Bit Score: 210; Significance: 1e-114; HSPs: 1)
Name: scaffold0922
Description:
Target: scaffold0922; HSP #1
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 315 - 700
Target Start/End: Complemental strand, 2658 - 2273
Alignment:
| Q |
315 |
tagtctaataaccaataggatcacttaaagcattccgagtttgtaaaatttttgcctcttgttgagtgatgctctgcaaaacagcttcagaggaagccaa |
414 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| | | |||| |||||| | |||||| |||||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
2658 |
tagtctaatagccaataggatcacttaaagcagcctgcgtttctaaaatctgtgcctcctgttgagtgatgttctgcaaaacagcttcaaaggaagccaa |
2559 |
T |
|
| Q |
415 |
ttgatgcttaagatccttcacatgttgcgtcaagatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcg |
514 |
Q |
| |
|
|||||| |||||||||| ||||||||| ||||| ||||||||||||||||| || ||||||| |||| ||||||||||||| ||||||||||||| ||| |
|
|
| T |
2558 |
ttgatgtttaagatcctccacatgttgagtcaaaatgtgttttgagtccaaaaaattttgcagcgcattttgagagacttgtaaaccaggaaacaaggcg |
2459 |
T |
|
| Q |
515 |
cgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatcca |
614 |
Q |
| |
|
||||||| ||| |||||||||||| ||||||||| |||| | |||| ||||||||||| ||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
2458 |
agcttttcaacaccatccaaccattctttatcaaaaggaaatctacgcatatcttgtaatagctcaacaaattcagaatggcttgaacctaacacatcca |
2359 |
T |
|
| Q |
615 |
acacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcataacccttgtatctgctactcaatgaagtgtcc |
700 |
Q |
| |
|
||| ||| ||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
2358 |
acaggtaatgcttttggaggaatttcaatagctcagctagacagttgtaggcataacccttgaatctgttactcaatgaagtgtcc |
2273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1147 (Bit Score: 109; Significance: 2e-54; HSPs: 1)
Name: scaffold1147
Description:
Target: scaffold1147; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 358 - 634
Target Start/End: Complemental strand, 1149 - 873
Alignment:
| Q |
358 |
taaaatttttgcctcttgttgagtgatgctctgcaaaacagcttcagaggaagccaattgatgcttaagatccttcacatgttgcgtcaagatgtgtttt |
457 |
Q |
| |
|
|||| ||| ||||||||||||||| || || | |||||||| |||| | ||| | ||||||||||||||||| ||||||||| ||||| ||||||||| |
|
|
| T |
1149 |
taaagtttgtgcctcttgttgagtaatactttccaaaacagattcaaggaaaggtagttgatgcttaagatcctccacatgttgagtcaaaatgtgtttt |
1050 |
T |
|
| Q |
458 |
gagtccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatt |
557 |
Q |
| |
|
||||||||||||||||||||| |||| ||||||||||| ||| ||||||||||| | | ||||| ||| |||| |||| | ||| |||||| ||||| |
|
|
| T |
1049 |
aagtccaacaatttttgcaatgtatctagagagacttgtaaactaggaaacaaagtgtgtttttcgacaccatctaaccgatccttgtcaaaagcaaata |
950 |
T |
|
| Q |
558 |
tgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggagg |
634 |
Q |
| |
|
|| |||||||||| | ||||||||| |||| ||| | ||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
949 |
tgtgcacatcttggattaactcaaccaatttagagttgcttgaacctaacacatccaacacatcatgggtttggagg |
873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 529 - 681
Target Start/End: Original strand, 8692444 - 8692596
Alignment:
| Q |
529 |
atccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtt |
628 |
Q |
| |
|
||||||||| | ||||||||||||||| |||||| ||||| ||| || ||| ||||||||||| |||| ||||||||| |||||||| |||||||| ||| |
|
|
| T |
8692444 |
atccaaccaatccttatcaaaaccaaagttgcgcgcatctagtagtagctccacaaattcagagtggcatgaacctaatacatccaagacactatgagtt |
8692543 |
T |
|
| Q |
629 |
tggaggaatttcaatagatcagctaggcagttgtaggcataacccttgtatct |
681 |
Q |
| |
|
| |||||||||||||| ||||| || ||||||||||| |||||||| |||| |
|
|
| T |
8692544 |
tcaaggaatttcaatagctcagccagtaagttgtaggcacaacccttgaatct |
8692596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 367 - 441
Target Start/End: Original strand, 8692240 - 8692314
Alignment:
| Q |
367 |
tgcctcttgttgagtgatgctctgcaaaacagcttcagaggaagccaattgatgcttaagatccttcacatgttg |
441 |
Q |
| |
|
||||||||||||| | || ||| ||||||||||| ||| | | |||||||||||||||||||| ||||||||| |
|
|
| T |
8692240 |
tgcctcttgttgaattatattcttcaaaacagctttggagcatgtcaattgatgcttaagatcctccacatgttg |
8692314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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