View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5975_high_36 (Length: 255)
Name: NF5975_high_36
Description: NF5975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5975_high_36 |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 42275636 - 42275411
Alignment:
| Q |
1 |
cacaaagtctctagttatgttcccaatcctcttgcaaactatatgcttccttttgttcccacaacctctaatgtctcaagaaaacaattttgttcgtcaa |
100 |
Q |
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| T |
42275636 |
cacaaagtctctagttatgttcccaatcctcttgcaaactatatgcttccttttgttcccacaacctctaatgtctcaagaaaacaattttgttcgtcaa |
42275537 |
T |
|
| Q |
101 |
ccagctagtcagctcatcatcactccccatcaacgctccaattcagaacctcaacaggttcattataaattttagttaccttaactcattgataaattca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42275536 |
ccagctagtcagctcatcatcactccccatcaacgctccaattcagaacctcaacaggttcattataaattttagttaccttaactcattgataaattca |
42275437 |
T |
|
| Q |
201 |
tatattttgtcacactaaataaacca |
226 |
Q |
| |
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|||||||||||||||||||||||||| |
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| T |
42275436 |
tatattttgtcacactaaataaacca |
42275411 |
T |
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