View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5977-Insertion-12 (Length: 140)
Name: NF5977-Insertion-12
Description: NF5977
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5977-Insertion-12 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 117; Significance: 5e-60; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 117; E-Value: 5e-60
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 1562258 - 1562390
Alignment:
| Q |
9 |
tcttttgatttaaagtttccatcattaacagtttgatctattttgtttttattttgctctttaatatgaattcagcaaagataaatgtagtgcataagtt |
108 |
Q |
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| T |
1562258 |
tcttttgatttaaagtttccatcattaacagtttgatctattttgtttttattttgctctttaatatgaattcagcaaagataaatgtagtgcataagtt |
1562357 |
T |
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| Q |
109 |
tac-tttgagtctagaatctgagcactgtctta |
140 |
Q |
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| T |
1562358 |
tacttttgagtctagaatgtgagcaccgtctta |
1562390 |
T |
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