View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5977-Insertion-5 (Length: 850)
Name: NF5977-Insertion-5
Description: NF5977
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5977-Insertion-5 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 694; Significance: 0; HSPs: 18)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 694; E-Value: 0
Query Start/End: Original strand, 9 - 846
Target Start/End: Original strand, 9373507 - 9374344
Alignment:
| Q |
9 |
acatcaacatccacatctgattcaattaccactggcctttcctttcttgaagatttgtatatttctttggaagatattctcaacatgccatcaacacaaa |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||| | ||| ||||||||||||||||| |||||||||||| |||| || ||| |||||||||| | |
|
|
| T |
9373507 |
acatcaacatccacatctgattcaattaccaatggcctcttcttgcttgaagatttgtatatatctttggaagatcttctaaatatgacatcaacacaga |
9373606 |
T |
|
| Q |
109 |
aggttatttctcaccatcaaggtgagaaatttgtggaagaattgttggatggttcagtgaaagttttggatatatgtggcatcacaagggacaccatgtt |
208 |
Q |
| |
|
|| || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
9373607 |
agcttgtttctcaccatcaaggtgagaaatttgtggaagagttgttggatggttcagtgaaagttttggatatctgtggcatcacaagggacaccatgtt |
9373706 |
T |
|
| Q |
209 |
acagattaaagaaaatgttcaatcacttcactcttctcttagaaggagaaagggagattcaagcattgaaacaagtgtagccgaatataaattcttcaca |
308 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9373707 |
acaaattaaagaaaatgttcaatcacttcactcttctcttagaaggagaaagggagattcaagcattgaaacaagtgtagccgaatataaattcttcaca |
9373806 |
T |
|
| Q |
309 |
aagaagatgaagaagaatgtcacaaagttgatcacatctttaaaacatatggaaactaaatttggagtttcttcacttttgaatcaagatcaagaccttg |
408 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9373807 |
aagaagatgaagaagaatgtcacaaagttgatcacatctttaaaacatatggaaactaaatttggagtttcttcacttttgaatcaagatcaagaccttg |
9373906 |
T |
|
| Q |
409 |
tcgcagtgattacagttcttagagaggtcattaaaatgaacttgtctatctttcaatcagttttgtctttcttggttggatcttcatcaaagtcaaagcc |
508 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| | |
|
|
| T |
9373907 |
tcgcagttattacagttcttagagaggtcattaaaatgaacttgtctatctttcaatccattttctctttcttggttggatcttcatcaaagtcaaaggc |
9374006 |
T |
|
| Q |
509 |
aacaaaatggttgaaagtgacaaatttgatgcaaaagagggtaacatgtgaagagaacatggagaatttcaatgaattgcagtgtgtcgaagcatcttta |
608 |
Q |
| |
|
||| |||||||||||||||||||| |||||||| ||||||||| | | |||||||||| || ||||||||||||||| | ||||| |||||||||||| |
|
|
| T |
9374007 |
aaccaaatggttgaaagtgacaaagttgatgcataagagggtatcctctgaagagaactcagacaatttcaatgaattggaatgtgttgaagcatcttta |
9374106 |
T |
|
| Q |
609 |
agaaccctttcaagtgaaggttcaaatgttgcacatgaaaaatttgaggctttggagaatgcaattgaaagtatagaaaacggtttagagaatatattta |
708 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
9374107 |
agaaccctttcaagtgaaggttctaatgttgcacatgaaagatttgaggctttggagaatgcaattgaaagtatagaaaatggtttagagaatatattta |
9374206 |
T |
|
| Q |
709 |
ggtgtttggttaaaactagagtctgtcttttgaatatcatgactctatcttagggatttgatgaggcttgaaaaattttgtacagttaatttgtatataa |
808 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9374207 |
ggtgtttggttaaaactagagtctgtcttttgaatatcatgactctatcttagggatttgatgaggcttgaaaaattttgtacagttaatttgtatataa |
9374306 |
T |
|
| Q |
809 |
atactgtatacaattcaatagaaacaacaaatttttgc |
846 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9374307 |
atactgtatacaattcaatagaaacaacaaatttttgc |
9374344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 648; E-Value: 0
Query Start/End: Original strand, 9 - 829
Target Start/End: Complemental strand, 9293050 - 9292228
Alignment:
| Q |
9 |
acatcaacatccacatctgattcaattaccactggcctttcctttcttgaagatttgtatatttctttggaagatattctcaacatgccatcaacacaaa |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||| |
|
|
| T |
9293050 |
acatcaacatccacatctgattcaattaccactggcctttcctttcttgaagatttgtatatttctttggaagatcttctcaatatgtcatcaacacaaa |
9292951 |
T |
|
| Q |
109 |
aggttatttctcaccatcaaggtgagaaatttgtggaagaattgttggatggttcagtgaaagttttggatatatgtggcatcacaagggacaccatgtt |
208 |
Q |
| |
|
||| ||||||||||||||| |||||||||||||||||||| ||| ||||||||||| |||||||||||||||| ||||||||||| ||||||| | |||| |
|
|
| T |
9292950 |
aggctatttctcaccatcagggtgagaaatttgtggaagagttgctggatggttcaatgaaagttttggatatctgtggcatcaccagggacatcgtgtt |
9292851 |
T |
|
| Q |
209 |
acagattaaagaaaatgttcaatcacttcactcttctcttagaaggagaaagggagattcaagcattgaaacaagtgtagccgaatataaattcttcaca |
308 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||| |
|
|
| T |
9292850 |
acaaattaaagaaaatgttcaatcacttcactcttctcttagaaggagaaagggagaatcaaacattgaaaaaagtgtagccgaatataaattcttcaca |
9292751 |
T |
|
| Q |
309 |
aagaagatgaagaagaatgtcacaaagttgatcacatctttaaaacatatggaaactaaatttggagtttcttcacttttgaatcaagatcaagaccttg |
408 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
9292750 |
aagaagatgaagaagaatgtcacaaagttgatcacatctttaaaacatatggaaactaaatttggagcttcctcacttttgaatcaagatcaagaccttg |
9292651 |
T |
|
| Q |
409 |
tcgcagtgattacagttcttagagaggtcattaaaatgaacttgtctatctttcaatcagttttgtctttcttggttggatcttcatcaaagtcaaagcc |
508 |
Q |
| |
|
| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
9292650 |
ttgcactgattacagttcttagagaggtcattaaaatgaacttgtctatctttcaatcagttttgtctttcttggttggatcttcatcaaagtcaaaggc |
9292551 |
T |
|
| Q |
509 |
aacaaaatggttgaaagtgacaaatttgatgcaaaagagggtaacatgtgaagagaacatggagaatttcaatgaattgcagtgtgtcgaagcatcttta |
608 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9292550 |
aacaaaatggttcaaagtgacaaagttgatgcaaaagagggtaacatgtgaagagaacatggagaatttcaatgaattgcagtgtgtcgaagcatcttta |
9292451 |
T |
|
| Q |
609 |
agaaccctttcaagtgaaggttcaaatgttgcacatgaaaaatttgaggctttggagaatgcaattgaaagtatagaaaacggtttagagaatatattta |
708 |
Q |
| |
|
||||||||||||||||| ||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
9292450 |
agaaccctttcaagtgatggttctattgttgcacatgaaagatttgaggctttggagaatgcaattgaaagtatagaaaagggtttagagaatatattta |
9292351 |
T |
|
| Q |
709 |
ggtgtttggttaaaactagagtctgtcttttgaatatcatgactctatcttagggatttgatgaggcttgaaaaattttgtacagttaatttgtatataa |
808 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || |||| | ||||||||||| | ||| |||||||||||| |
|
|
| T |
9292350 |
ggcgtttggttaaaactagagtctgtcttttgaacatcataactctatcttagggacctgctgagtatagaaaaattttgcagagtcaatttgtatatat |
9292251 |
T |
|
| Q |
809 |
atac--tgtatacaattcaatag |
829 |
Q |
| |
|
|||| ||||||||||||||||| |
|
|
| T |
9292250 |
atacgatgtatacaattcaatag |
9292228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 648; E-Value: 0
Query Start/End: Original strand, 9 - 780
Target Start/End: Complemental strand, 9297657 - 9296886
Alignment:
| Q |
9 |
acatcaacatccacatctgattcaattaccactggcctttcctttcttgaagatttgtatatttctttggaagatattctcaacatgccatcaacacaaa |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
9297657 |
acatcaacatccacatctgattcaattaccactggcctttcctttcttgaagatttgtatatttctttggaagatcttctcaacatgtcatcaacacaaa |
9297558 |
T |
|
| Q |
109 |
aggttatttctcaccatcaaggtgagaaatttgtggaagaattgttggatggttcagtgaaagttttggatatatgtggcatcacaagggacaccatgtt |
208 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
9297557 |
aggctatttctcaccatcaaggtgagaaatttgtggaagaattattggatggttcagtgaaagttttggatatctgtggcatcacaagggacaccatgtt |
9297458 |
T |
|
| Q |
209 |
acagattaaagaaaatgttcaatcacttcactcttctcttagaaggagaaagggagattcaagcattgaaacaagtgtagccgaatataaattcttcaca |
308 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
9297457 |
acaaattaaagaaaatgttcaatcacttcactcttctcttagaaggagaaagggagattcaagcattgaaacaagtgtagccgaatataaatttttcact |
9297358 |
T |
|
| Q |
309 |
aagaagatgaagaagaatgtcacaaagttgatcacatctttaaaacatatggaaactaaatttggagtttcttcacttttgaatcaagatcaagaccttg |
408 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9297357 |
aagaagatgaagaagaatgtcacaaagttgatcacatatttaaaacatatggaaactaaatttggagtttcttcacttttgaatcaagatcaagaccttg |
9297258 |
T |
|
| Q |
409 |
tcgcagtgattacagttcttagagaggtcattaaaatgaacttgtctatctttcaatcagttttgtctttcttggttggatcttcatcaaagtcaaagcc |
508 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| | |
|
|
| T |
9297257 |
tcgcagttattacagttcttagagaggtcattaaaatgaacttgtctatctttcaatccatattgtctttcttggttggatcttcatcaaagtcaaaggc |
9297158 |
T |
|
| Q |
509 |
aacaaaatggttgaaagtgacaaatttgatgcaaaagagggtaacatgtgaagagaacatggagaatttcaatgaattgcagtgtgtcgaagcatcttta |
608 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||| |
|
|
| T |
9297157 |
aacaaaatggttgaaagtgacaaagttgatgcaaaagagggtaacatgtgaagagaggatggagaatttcaatgaattgcagtgtgtggaagcatcgtta |
9297058 |
T |
|
| Q |
609 |
agaaccctttcaagtgaaggttcaaatgttgcacatgaaaaatttgaggctttggagaatgcaattgaaagtatagaaaacggtttagagaatatattta |
708 |
Q |
| |
|
||||||||| |||||||||||| | |||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
9297057 |
agaacccttataagtgaaggttctattgttgcacatgatagatttgaggctttggagaatgcaattgaaagtatagaaaatggtttagagaatatattta |
9296958 |
T |
|
| Q |
709 |
ggtgtttggttaaaactagagtctgtcttttgaatatcatgactctatcttagggatttgatgaggcttgaa |
780 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
9296957 |
ggcatttggttaaaactagagtctgtcttttgaacatcatgactctatcttagggatctgatgaggattgaa |
9296886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 592; E-Value: 0
Query Start/End: Original strand, 9 - 829
Target Start/End: Complemental strand, 9301872 - 9301051
Alignment:
| Q |
9 |
acatcaacatccacatctgattcaattaccactggcctttcctttcttgaagatttgtatatttctttggaagatattctcaacatgccatcaacacaaa |
108 |
Q |
| |
|
||||||||||||||||||||||||||||| | |||||| | ||| ||||||||||||||||| |||||||||||| |||| || || |||||||||| | |
|
|
| T |
9301872 |
acatcaacatccacatctgattcaattacaaatggcctcttcttgcttgaagatttgtatatatctttggaagatcttctaaatttgacatcaacacaga |
9301773 |
T |
|
| Q |
109 |
aggttatttctcaccatcaaggtgagaaatttgtggaagaattgttggatggttcagtgaaagttttggatatatgtggcatcacaagggacaccatgtt |
208 |
Q |
| |
|
|| || ||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||| | ||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
9301772 |
agcttgtttctcaccatcatggtgagaaatttgtggaagagttgttggatggttcaatgaaaatgttggatatatgtggcattacaagggacactatgtt |
9301673 |
T |
|
| Q |
209 |
acagattaaagaaaatgttcaatcacttcactcttctcttagaaggagaaagggagattcaagcattgaaacaagtgtagccgaatataaattcttcaca |
308 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||| |
|
|
| T |
9301672 |
acacattaaagaaaatgttcaatcacttcactcttctcttagaaggagaaagggagattcaagcattgaaaaaagtgtagcagaatataaatttttcaca |
9301573 |
T |
|
| Q |
309 |
aagaagatgaagaagaatgtcacaaagttgatcacatctttaaaacatatggaaactaaatttggagtttcttcacttttgaatcaagatcaagaccttg |
408 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
9301572 |
aagaagatgaagaagaatgtcacaaagttgatcacatctttaaaacatatggaaagtaaatttggagcttcttcacttttgaaaaaagatcaagaccttg |
9301473 |
T |
|
| Q |
409 |
tcgcagtgattacagttcttagagaggtcattaaaatgaacttgtctatctttcaatcagttttgtctttcttggttggatcttcatcaaagtcaaagcc |
508 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
9301472 |
ttgcagtgattacagttcttagagaggtcattaaattgaacttgtctatctttcaatctgttttgtctttcttggttggatcttcatcaaagtcaaaggc |
9301373 |
T |
|
| Q |
509 |
aacaaaatggttgaaagtgacaaatttgatgcaaaagagggtaacatgtgaagagaacatggagaatttcaatgaattgcagtgtgtcgaagcatcttta |
608 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
9301372 |
aacaaaatggttgaaagtgacaaagttgatgcaaaagagggtaacatgtgaggagaacatggagaatttcaatgaattgcagtgtgtggaagcatctttg |
9301273 |
T |
|
| Q |
609 |
agaaccctttcaagtgaaggttcaaatgttgcacatgaaaaatttgaggctttggagaatgcaattgaaagtatagaaaacggtttagagaatatattta |
708 |
Q |
| |
|
||||||||| ||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
9301272 |
agaacccttacaagtgaaggttctaacgttgcacatgaaagatttgaggctttggagaatgcaattgaaagtatagaaaatggtttagagaatatattta |
9301173 |
T |
|
| Q |
709 |
ggtgtttggttaaaactagagtctgtcttttgaatatcatgactctatcttagggatttgatgaggcttgaaaaattttgtacagttaatttgtatataa |
808 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||| ||| ||| ||||| ||||| ||| ||||||||| |
|
|
| T |
9301172 |
ggcgtttggttaaaactagagtctgtcttttgaacatcataactctatcttagggatctgatgaggattg-aaatttttgcacagtcaatctgtatataa |
9301074 |
T |
|
| Q |
809 |
ata--ctgtatacaattcaatag |
829 |
Q |
| |
|
||| |||||| |||||||||| |
|
|
| T |
9301073 |
atattatgtatataattcaatag |
9301051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 580; E-Value: 0
Query Start/End: Original strand, 9 - 829
Target Start/End: Complemental strand, 9305490 - 9304668
Alignment:
| Q |
9 |
acatcaacatccacatctgattcaattaccactggcctttcctttcttgaagatttgtatatttctttggaagatattctcaacatgccatcaacacaaa |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||| | ||| ||||||||||||||||| |||||||||||| |||| || ||| |||||||||| | |
|
|
| T |
9305490 |
acatcaacatccacatctgattcaattaccaatggcctcttcttgcttgaagatttgtatatatctttggaagatcttctaaatatgacatcaacacaga |
9305391 |
T |
|
| Q |
109 |
aggttatttctcaccatcaaggtgagaaatttgtggaagaattgttggatggttcagtgaaagttttggatatatgtggcatcacaagggacaccatgtt |
208 |
Q |
| |
|
|| || |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| | ||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
9305390 |
agcttgtttctcaccatcaaggtgagaaatttgtggaagagttgttggatggttcaatgaaaatgttggatatatgtggcattacaagggacactatgtt |
9305291 |
T |
|
| Q |
209 |
acagattaaagaaaatgttcaatcacttcactcttctcttagaaggagaaagggagattcaagcattgaaacaagtgtagccgaatataaattcttcaca |
308 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||| |||||| |
|
|
| T |
9305290 |
acaaattaaagaaaatgttcaatcacttcactcttctcttagaaggaaaaagggagattcaagcattgaaaaaagtgtagcagaatataaatttttcaca |
9305191 |
T |
|
| Q |
309 |
aagaagatgaagaagaatgtcacaaagttgatcacatctttaaaacatatggaaactaaatttggagtttcttcacttttgaatcaagatcaagaccttg |
408 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
9305190 |
aagaagatgaagaagaatgtcacaaagttgatcacatctttaaaacatatggaaagtaaatttggagcttcttcacttttgaataaagatcaagaccttg |
9305091 |
T |
|
| Q |
409 |
tcgcagtgattacagttcttagagaggtcattaaaatgaacttgtctatctttcaatcagttttgtctttcttggttggatcttcatcaaagtcaaagcc |
508 |
Q |
| |
|
| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||| | |
|
|
| T |
9305090 |
ttgcagtgattacagttcttagagaggtcattgcaatgaacttgtctatctttcgatcccttttttctttcttggttggatcttcatcaaagtcaaaggc |
9304991 |
T |
|
| Q |
509 |
aacaaaatggttgaaagtgacaaatttgatgcaaaagagggtaacatgtgaagagaacatggagaatttcaatgaattgcagtgtgtcgaagcatcttta |
608 |
Q |
| |
|
||| |||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
9304990 |
aaccaaatggttgaaagtagcaaagttgatgcaaaagagggtaacatgcgaagagaacatggagaatttcaatgaattgcagtgtgttgaagcatcttta |
9304891 |
T |
|
| Q |
609 |
agaaccctttcaagtgaaggttcaaatgttgcacatgaaaaatttgaggctttggagaatgcaattgaaagtatagaaaacggtttagagaatatattta |
708 |
Q |
| |
|
||||||||||||||||||| ||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
9304890 |
agaaccctttcaagtgaagattctaatgttgcacatgaaagatttgaggctttcgagaatgcaattgaaagtatagaaaatggtttagagaatatattta |
9304791 |
T |
|
| Q |
709 |
ggtgtttggttaaaactagagtctgtcttttgaatatcatgactctatcttagggatttgatgaggcttgaaaaattttgtacagttaatttgtatataa |
808 |
Q |
| |
|
|| ||||||||||||||||||| ||||||||||| ||||||||||||||||||| || |||||||| ||||||| ||||| |||| ||| ||||||||| |
|
|
| T |
9304790 |
ggcgtttggttaaaactagagtttgtcttttgaacatcatgactctatcttaggaatctgatgaggattgaaaatttttgcacagacaatatgtatataa |
9304691 |
T |
|
| Q |
809 |
ata--ctgtatacaattcaatag |
829 |
Q |
| |
|
||| ||||||||||| ||||| |
|
|
| T |
9304690 |
atattatgtatacaatttaatag |
9304668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 577; E-Value: 0
Query Start/End: Original strand, 9 - 829
Target Start/End: Complemental strand, 9352019 - 9351194
Alignment:
| Q |
9 |
acatcaacatccacatctgattcaattaccactggcctttcctttcttgaagatttgtatatttctttggaagatattctcaacatgccatcaacacaaa |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||| ||||||||| ||||||| ||| |||||||||||| |
|
|
| T |
9352019 |
acatcaacatccacatctgattcaattaccaatggccttttcttgcttgaagatttgtatatttccttggaagatcttctcaatatgtcatcaacacaaa |
9351920 |
T |
|
| Q |
109 |
aggttatttctcaccatcaaggtgagaaatttgtggaagaattgttggatggttcagtgaaagttttggatatatgtggcatcacaagggacaccatgtt |
208 |
Q |
| |
|
||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
9351919 |
aggcctttgctcaccatcaaggtgagaaatttgtggaagagttgttggatggttcagtgaaagttttggatatatgtggcatcacaagggacatcatgtt |
9351820 |
T |
|
| Q |
209 |
acagattaaagaaaatgttcaatcacttcactcttctcttagaaggagaaagggagattcaagcattgaaacaagtgtagccgaatataaattcttcaca |
308 |
Q |
| |
|
||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||| |
|
|
| T |
9351819 |
acaaattaacgaaaatgttcaatcaattcactcttctcttagaaggagaaagggagaatcaagcattgaaaaaagtgtagcagaatataaattcttcaca |
9351720 |
T |
|
| Q |
309 |
aagaagatgaagaagaatgtcacaaagttgatcacatctttaaaacatatggaaactaaatttggagtttcttcacttttgaatcaa---gatcaagacc |
405 |
Q |
| |
|
||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||| ||| |||||||||||| || |||||||||| |
|
|
| T |
9351719 |
aagaagatgaagaagaacgtcacaaagttgattacatctttaaaacatatggaaagtaaatttggagcttcctcacttttgaataaattagatcaagacc |
9351620 |
T |
|
| Q |
406 |
ttgtcgcagtgattacagttcttagagaggtcattaaaatgaacttgtctatctttcaatcagttttgtctttcttggttggatcttcatcaaagtcaaa |
505 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
9351619 |
ttgttgcagtgattacagttcttagagaggtcattgcaatgaacttgtctatctttcgatcccttttttctttcttggttggatcttcatcaaagtcaaa |
9351520 |
T |
|
| Q |
506 |
gccaacaaaatggttgaaagtgacaaatttgatgcaaaagagggtaacatgtgaagagaacatggagaatttcaatgaattgcagtgtgtcgaagcatct |
605 |
Q |
| |
|
| || |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||| |
|
|
| T |
9351519 |
ggcagcaaaatggttaaaagtgacaaagttgatgcaaaagagggtaacatgtgaagagaacatggagagtttcaatgaattccagtgtgtggaagcatct |
9351420 |
T |
|
| Q |
606 |
ttaagaaccctttcaagtgaaggttcaaatgttgcacatgaaaaatttgaggctttggagaatgcaattgaaagtatagaaaacggtttagagaatatat |
705 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
9351419 |
ttaagaacccttataagtgaaggttcaaatgttgcacatgaaggatttgaggctttggagaatgcaattgaaagtatagagaatggtttagagaatatat |
9351320 |
T |
|
| Q |
706 |
ttaggtgtttggttaaaactagagtctgtcttttgaatatcatgactctatcttagggatttgatgaggcttgaaaaattttgtacagttaatttgtata |
805 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||| ||||| ||||| ||| |||||| |
|
|
| T |
9351319 |
ttaggcgtttggttaaaactagagtctgtcttttgaacatcatgactctatcttagggatttgataaggattgaaattttttgcacagtcaatctgtata |
9351220 |
T |
|
| Q |
806 |
taaata--ctgtatacaattcaatag |
829 |
Q |
| |
|
||||| ||||||||||||||||| |
|
|
| T |
9351219 |
caaatattatgtatacaattcaatag |
9351194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 569; E-Value: 0
Query Start/End: Original strand, 9 - 829
Target Start/End: Complemental strand, 9332291 - 9331466
Alignment:
| Q |
9 |
acatcaacatccacatctgattcaattaccactggcctttcctttcttgaagatttgtatatttctttggaagatattctcaacatgccatcaacacaaa |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||| ||||||||| ||||||| ||| |||||||||||| |
|
|
| T |
9332291 |
acatcaacatccacatctgattcaattaccaatggccttttcttgcttgaagatttgtatatttccttggaagatcttctcaatatgtcatcaacacaaa |
9332192 |
T |
|
| Q |
109 |
aggttatttctcaccatcaaggtgagaaatttgtggaagaattgttggatggttcagtgaaagttttggatatatgtggcatcacaagggacaccatgtt |
208 |
Q |
| |
|
||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
9332191 |
aggcctttgctcaccatcaaggtgagaaatttgtggaagagttgttggatggttcagtgaaagttttggatatatgtggcatcacaagggacatcatgtt |
9332092 |
T |
|
| Q |
209 |
acagattaaagaaaatgttcaatcacttcactcttctcttagaaggagaaagggagattcaagcattgaaacaagtgtagccgaatataaattcttcaca |
308 |
Q |
| |
|
||| ||||| |||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||| |
|
|
| T |
9332091 |
acaaattaacgaaaattttcaatcaattcactcttctcttagaaggagaaagggagaatcaagcattgaaaaaagtgtagcagaatataaattcttcaca |
9331992 |
T |
|
| Q |
309 |
aagaagatgaagaagaatgtcacaaagttgatcacatctttaaaacatatggaaactaaatttggagtttcttcacttttgaatcaa---gatcaagacc |
405 |
Q |
| |
|
||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||| ||| |||||||||||| || |||||||||| |
|
|
| T |
9331991 |
aagaagatgaagaagaacgtcacaaagttgattacatctttaaaacatatggaaagtaaatttggagcttcctcacttttgaataaattagatcaagacc |
9331892 |
T |
|
| Q |
406 |
ttgtcgcagtgattacagttcttagagaggtcattaaaatgaacttgtctatctttcaatcagttttgtctttcttggttggatcttcatcaaagtcaaa |
505 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |||||||||||||| ||||| ||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
9331891 |
ttgttgcagtgattacagttcttagagaggtcattgcaatgaacttgtctacctttcgatcccttttttctttcttggttggatcttcatcaaagtcaaa |
9331792 |
T |
|
| Q |
506 |
gccaacaaaatggttgaaagtgacaaatttgatgcaaaagagggtaacatgtgaagagaacatggagaatttcaatgaattgcagtgtgtcgaagcatct |
605 |
Q |
| |
|
| || |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||| |
|
|
| T |
9331791 |
ggcagcaaaatggttaaaagtgacaaagttgatgcaaaagagggtaacatgtgaagagaacatggagagtttcaatgaattccagtgtgtggaagcatct |
9331692 |
T |
|
| Q |
606 |
ttaagaaccctttcaagtgaaggttcaaatgttgcacatgaaaaatttgaggctttggagaatgcaattgaaagtatagaaaacggtttagagaatatat |
705 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
9331691 |
ttaagaacccttataagtgaaggttcaaatgttgcacatgaaggatttgaggctttggagaatgcaattgaaagtatagagaatggtttagagaatatat |
9331592 |
T |
|
| Q |
706 |
ttaggtgtttggttaaaactagagtctgtcttttgaatatcatgactctatcttagggatttgatgaggcttgaaaaattttgtacagttaatttgtata |
805 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||| ||||| ||||| ||| |||||| |
|
|
| T |
9331591 |
ttaggcgtttggttaaaactagagtctgtcttttgaacatcatgactctatcttagggatttgataaggattgaaattttttgcacagtcaatctgtata |
9331492 |
T |
|
| Q |
806 |
taaata--ctgtatacaattcaatag |
829 |
Q |
| |
|
||||| ||||||||||||||||| |
|
|
| T |
9331491 |
caaatattatgtatacaattcaatag |
9331466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 553; E-Value: 0
Query Start/End: Original strand, 9 - 753
Target Start/End: Original strand, 9356385 - 9357129
Alignment:
| Q |
9 |
acatcaacatccacatctgattcaattaccactggcctttcctttcttgaagatttgtatatttctttggaagatattctcaacatgccatcaacacaaa |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| | ||| |||||||||||| |
|
|
| T |
9356385 |
acatcaacatccacatctgattcaattaccactggcctttcctttcttgaagatttgtatatttctttggatgatcttctacatatgtcatcaacacaaa |
9356484 |
T |
|
| Q |
109 |
aggttatttctcaccatcaaggtgagaaatttgtggaagaattgttggatggttcagtgaaagttttggatatatgtggcatcacaagggacaccatgtt |
208 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||| |||||||||||||||||||| ||||||||| | |
|
|
| T |
9356485 |
aggccgtttctcaccatcaaggtgagaaatttgtggaagagttgttggatggttcggtgaaacttttagatatatgtggcatcacaagagacaccatgct |
9356584 |
T |
|
| Q |
209 |
acagattaaagaaaatgttcaatcacttcactcttctcttagaaggagaaagggagattcaagcattgaaacaagtgtagccgaatataaattcttcaca |
308 |
Q |
| |
|
||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
9356585 |
acaaattaaagaaaatgttcaatcacttcactctgctcttagaaggagaaagggggattcaagcatcgaaactagtgtagccgaatataaattcttcaca |
9356684 |
T |
|
| Q |
309 |
aagaagatgaagaagaatgtcacaaagttgatcacatctttaaaacatatggaaactaaatttggagtttcttcacttttgaatcaagatcaagaccttg |
408 |
Q |
| |
|
|||||||||||||| |||||| ||||||||||||||||||||||||| ||||||| ||||||||||| ||| |||||||||||| || |||||||||||| |
|
|
| T |
9356685 |
aagaagatgaagaaaaatgtcgcaaagttgatcacatctttaaaacagatggaaagtaaatttggagcttcctcacttttgaataaaaatcaagaccttg |
9356784 |
T |
|
| Q |
409 |
tcgcagtgattacagttcttagagaggtcattaaaatgaacttgtctatctttcaatcagttttgtctttcttggttggatcttcatcaaagtcaaagcc |
508 |
Q |
| |
|
| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| | |
|
|
| T |
9356785 |
ttgcagtgattacagttcttagagaggtcattgcaatgaacttgtctatctttcaatcccttttttctttcttggttggatcttcatcaaagtcaaaggc |
9356884 |
T |
|
| Q |
509 |
aacaaaatggttgaaagtgacaaatttgatgcaaaagagggtaacatgtgaagagaacatggagaatttcaatgaattgcagtgtgtcgaagcatcttta |
608 |
Q |
| |
|
| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||| |||||||||||| |
|
|
| T |
9356885 |
agcaaaatggttgaaagtgacaaagttgatgcaaaagagggtaacatgtgaagagaacatggagagtatcaatgaattccagtgtgtggaagcatcttta |
9356984 |
T |
|
| Q |
609 |
agaaccctttcaagtgaaggttcaaatgttgcacatgaaaaatttgaggctttggagaatgcaattgaaagtatagaaaacggtttagagaatatattta |
708 |
Q |
| |
|
||||||||| |||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
9356985 |
agaacccttataagtgaaggttctaacgttgcacatgaaagatttgaggctttggagaatgcaattgaaagtatagaaaagggtttagagaatatattta |
9357084 |
T |
|
| Q |
709 |
ggtgtttggttaaaactagagtctgtcttttgaatatcatgactc |
753 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
9357085 |
ggtgtttggttaaaactagagtctgtcttttgaacatcatgactc |
9357129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 506; E-Value: 0
Query Start/End: Original strand, 9 - 753
Target Start/End: Original strand, 9349003 - 9349750
Alignment:
| Q |
9 |
acatcaacatccacatctgattcaattaccactggcctttcctttcttgaagatttgtatatttctttggaagatattctcaacatgccatcaacacaaa |
108 |
Q |
| |
|
|||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||| |||||||| ||| |||| | ||| |||||||||||| |
|
|
| T |
9349003 |
acatcaacatccacatctgagtcaattactaccggcctttcctttcttgaagatttgtatatatctttggaggattttctacatatgtcatcaacacaaa |
9349102 |
T |
|
| Q |
109 |
aggttatttctcaccatcaaggtgagaaatttgtggaagaattgttggatggttcagtgaaagttttggatatatgtggcatcacaagggacaccatgtt |
208 |
Q |
| |
|
||| ||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9349103 |
aggccattgctcaccatcaaggtgagaaatttgtggaagagttgttggatggttcggtgaaagttttggatatatgtggcatcacaagggacaccatgtt |
9349202 |
T |
|
| Q |
209 |
acagattaaagaaaatgttcaatcacttcactcttctcttagaaggagaaagggagattcaagcattgaaacaagtgtagccgaatataaattcttcaca |
308 |
Q |
| |
|
||| || ||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
9349203 |
acaaataaaagaaaatgttcaatcacttcagtcttctcttagaaggagaaagggaaaatcaagcattgaaaaaagtgtagccgaatataaattcttcacg |
9349302 |
T |
|
| Q |
309 |
aagaagatgaagaagaatgtcacaaagttgatcacatctttaaaacatatggaaactaaatttggagtttcttcacttttgaatcaagatcaagaccttg |
408 |
Q |
| |
|
|||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
9349303 |
aagaagatgaagaaaaatgtcataaagttgatcacatctttaaaacatatggaaactaaatttggagcttcctcacttttgaatcaagatcaagaccttg |
9349402 |
T |
|
| Q |
409 |
tcgcagtgattacagttcttagagaggtcattaaaatgaacttgtctatctttcaatcagttttgtctttcttggttggatcttcatcaaagtcaaagcc |
508 |
Q |
| |
|
|| ||||||||||||||||| ||||||||| |||||||||||| ||||| |||| ||||| ||||||||| |||| ||| |||||||||||||| | |
|
|
| T |
9349403 |
ctgctgtgattacagttcttagtgaggtcattgcaatgaacttgtcaatcttcaaatctgttttttctttcttgattgggtctccatcaaagtcaaaggc |
9349502 |
T |
|
| Q |
509 |
aacaaaatggttgaaagtgacaaatttgatgcaaaagag---ggtaacatgtgaagagaacatggagaatttcaatgaattgcagtgtgtcgaagcatct |
605 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| ||| |||||||| |||| |||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
9349503 |
aacaaaatggttgaaagtgacaaagttgatgcaaaagagagtagtatcatgtgaaaagaatttggagaatttcaatgaattgcagtgtgtggaagcatct |
9349602 |
T |
|
| Q |
606 |
ttaagaaccctttcaagtgaaggttcaaatgttgcacatgaaaaatttgaggctttggagaatgcaattgaaagtatagaaaacggtttagagaatatat |
705 |
Q |
| |
|
|| ||||||||| |||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
9349603 |
ttgagaacccttataagtgaaggttctaatgttgcacatgaaagatttgaagctttggagaatgcaattgaaagtatagaaaatggtttagagaatatat |
9349702 |
T |
|
| Q |
706 |
ttaggtgtttggttaaaactagagtctgtcttttgaatatcatgactc |
753 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
9349703 |
ttaggggtttggttaaaactagagtctgtcttttgaacatcatgactc |
9349750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 491; E-Value: 0
Query Start/End: Original strand, 9 - 742
Target Start/End: Complemental strand, 9288521 - 9287794
Alignment:
| Q |
9 |
acatcaacatccacatctgattcaattaccactggcctttcctttcttgaagatttgtatatttctttggaagatattctcaacatgccatcaacacaaa |
108 |
Q |
| |
|
|||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||| |
|
|
| T |
9288521 |
acatcaacatccacatctcattcaattaccaatggcctttcatttcttgaagatttgtatatttctttggaagatcttctcaatatgtcatcaacacaaa |
9288422 |
T |
|
| Q |
109 |
aggttatttctcaccatca---aggtgagaaatttgtggaagaattgttggatggttcagtgaaagttttggatatatgtggcatcacaagggacaccat |
205 |
Q |
| |
|
||| ||| ||||||| || ||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
9288421 |
aggccattgctcaccaccatcgaggtgagaaatttgtcgaagagttgttggatggttcagtgaaagttttggatatctgtggcatcacaagggacaccat |
9288322 |
T |
|
| Q |
206 |
gttacagattaaagaaaatgttcaatcacttcactcttctcttagaaggagaaagggagattcaagcattgaaacaagtgtagccgaatataaattcttc |
305 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
9288321 |
gttacagattaaagaaaatgttcaatcccttcactcttcccttagaaggagaaagagagattcaagcatcgaaacaagtgtagccgaatataaattattc |
9288222 |
T |
|
| Q |
306 |
acaaagaagatgaagaagaatgtcacaaagttgatcacatctttaaaacatatggaaactaaatttggagtttcttcacttttgaatcaagatcaagacc |
405 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
9288221 |
acaaagaagatgaagaagaatgtcacaaagttgatcacatctttaaaacgaatggaaagtaaatttggagcttcctcacttttgaatcaagatcaagacc |
9288122 |
T |
|
| Q |
406 |
ttgtcgcagtgattacagttcttagagaggtcattaaaatgaacttgtctatctttcaatcagttttgtctttcttggttggatcttcatcaaagtcaaa |
505 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
9288121 |
ttgttgcagtgattacagttcttagagaggtcattgcaatgaacatgtctatctttcaatccattttgtctttcttggttggatcatcatcaaagtcaaa |
9288022 |
T |
|
| Q |
506 |
gccaacaaaatggttgaaagtgacaaatttgatgcaaaagagggtaacatgtgaagagaacatggagaatttcaatgaattgcagtgtgtcgaagcatct |
605 |
Q |
| |
|
| |||| ||||||||| || |||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
9288021 |
ggcaaccaaatggttg---------aacttgatgcataagagggtaatatgtgaagagaacatggagaatttcaatgaattgcaatgtgtggaagcatct |
9287931 |
T |
|
| Q |
606 |
ttaagaaccctttcaagtgaaggttcaaatgttgcacatgaaaaatttgaggctttggagaatgcaattgaaagtatagaaaacggtttagagaatatat |
705 |
Q |
| |
|
|| | ||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| |||||| ||| |
|
|
| T |
9287930 |
ttgaaaacccttataagtgaaggttctaatgttgcacatgaaagatttgaggctttggagaatgcaattgaaatgatagaaaatggtttggagaatgtat |
9287831 |
T |
|
| Q |
706 |
ttaggtgtttggttaaaactagagtctgtcttttgaa |
742 |
Q |
| |
|
||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
9287830 |
ttaggcgtttggttaaaactagagtcagtcttttgaa |
9287794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 485; E-Value: 0
Query Start/End: Original strand, 9 - 832
Target Start/End: Original strand, 9367601 - 9368438
Alignment:
| Q |
9 |
acatcaacatccacatctgattcaattaccactggcctttcctttcttgaagatttgtatatttctttggaagatattctcaacatgccatcaacacaaa |
108 |
Q |
| |
|
||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||| |
|
|
| T |
9367601 |
acatcaacatcgacatctgattcaattaccaatggcctttcatttcttgaagatttgtatatttctttggaaaatcttctcaatatgtcatcaacacaaa |
9367700 |
T |
|
| Q |
109 |
aggttatttctcaccatcaaggtgagaaatttgtggaagaattgttggatggttcagtgaaagttttggatatatgtggcatcacaagggacaccatgtt |
208 |
Q |
| |
|
||| ||| |||||| |||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||| || |||||||||||||||||| ||| |
|
|
| T |
9367701 |
aggccattgctcaccgtcaaggtgagaaatttgttgaagagttgttggatggttcagtgaaaattttggatatctgcggcatcacaagggacaccgtgtc |
9367800 |
T |
|
| Q |
209 |
acagattaaagaaaatgttcaatcacttcactcttctcttagaaggagaaagggagattcaagcattgaaacaagtgtagccgaatataaattcttcaca |
308 |
Q |
| |
|
||| |||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
9367801 |
acaaattaaagaaaatgttcaaacacttcactctgctcttagaaggagaaaggcagattcaagcattgaaaaaagtgtagccgaatataaattcttcaca |
9367900 |
T |
|
| Q |
309 |
aagaagatgaagaagaatgtcacaaagttgatcacatctttaaaacatatggaaactaaatttggagtttcttcacttttgaatcaagatcaagaccttg |
408 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| || ||||||||||||||||||||||||| |
|
|
| T |
9367901 |
aagaagatgaagaagaatgtcacaaagttgatcacatctttaaaacatatggaaagtaaatttggagcttcctcgcttttgaatcaagatcaagaccttg |
9368000 |
T |
|
| Q |
409 |
tcgcagtgattacagttcttagagaggtcattaaaatgaacttgtctatctttcaatcagttttgtctttcttggttggatcttcatcaaagtcaaagcc |
508 |
Q |
| |
|
| ||||||||||||||| |||||||||||||| ||||||| |||||||||||||||| || |||||||||||||||| ||| ||||||| |||||| | |
|
|
| T |
9368001 |
ttgcagtgattacagttattagagaggtcattgcaatgaacatgtctatctttcaatcccttctgtctttcttggttggttctgcatcaaaatcaaaggc |
9368100 |
T |
|
| Q |
509 |
aacaaaatggttgaaagtgacaaatttgatgcaaaagagggtaa---catgtgaagagaacatggagaatttcaatgaattgcagtgtgtcgaagcatct |
605 |
Q |
| |
|
||| |||||||| |||||| |||| |||||||| || | | || ||||||||||||| |||||||||||||||||||||||| || || |||||| |
|
|
| T |
9368101 |
aaccaaatggtttaaagtggcaaaattgatgcacaaaacgacaatctcatgtgaagagaagttggagaatttcaatgaattgcagtcagttgatgcatct |
9368200 |
T |
|
| Q |
606 |
ttaagaaccctttcaagtgaaggttcaaatgt---------tgcacatgaaaaatttgaggctttggagaatgcaattgaaagtatagaaaacggtttag |
696 |
Q |
| |
|
|| |||||||||||||| |||||||||| ||| ||||| ||||| ||||||||||||||||||||||||||||| || ||||| ||||||| |
|
|
| T |
9368201 |
ttgagaaccctttcaagagaaggttcaattgtttcaaaggatgcacgtgaaagatttgaggctttggagaatgcaattgaaatgattgaaaatggtttag |
9368300 |
T |
|
| Q |
697 |
agaatatatttaggtgtttggttaaaactagagtctgtcttttgaatatcatgactctatcttagggatttgatgaggcttgaaaaattttgtacagtta |
796 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| ||| || | ||| | ||||||||||| ||||||| |
|
|
| T |
9368301 |
agaatatatttaggtgtttggttaaaactagagtttgtcttttgaacattgtgactctatcttagagatctgctcaggatcgaaaaattttgcacagtta |
9368400 |
T |
|
| Q |
797 |
atttgtatataaatac--tgtatacaattcaatagaaa |
832 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| |
|
|
| T |
9368401 |
atttgtatataaatactatgtatacaattcaatagaaa |
9368438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 198 - 753
Target Start/End: Original strand, 9328963 - 9329506
Alignment:
| Q |
198 |
gacaccatgttacagattaaagaaaatgttcaatcacttcactcttctcttagaaggagaaagggagattcaagcattgaaacaagtgtagccgaatata |
297 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||| | ||||||| ||||||| |
|
|
| T |
9328963 |
gacaccatgttacaaattaaagaaaatgttcaatcacttcactcttctattagaaggagaaaaggagaatcaagcattgaaaaatgtgtagcagaatata |
9329062 |
T |
|
| Q |
298 |
aattcttcacaaagaagatgaagaagaatgtcacaaagttgatcacatctttaaaacatatggaaactaaatttggagtttcttcacttttgaatcaaga |
397 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||| |||| |
|
|
| T |
9329063 |
aattattcacaaagaagatgaagaagaatgtcacaaagttgatctcatctttaaaacatatggaaactaaatttggagcttcctcacttttgaataaaga |
9329162 |
T |
|
| Q |
398 |
tcaagaccttgtcgcagtgattacagttcttagagaggtcattaaaatgaacttgtctatctttcaatcagttttgtctttcttggttggatcttcatca |
497 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||| |||||||||||| || ||||| |
|
|
| T |
9329163 |
tcaagaccttgttgcagtgattacagttcttagagaggtcattgcaatgaacatgtctatctttcaatccattttgtgtttcttggttggggctgcatca |
9329262 |
T |
|
| Q |
498 |
aagtcaaagccaacaaaatggttgaaagtgacaaatttgatgcaaaagagggtaacatgtgaagagaacatggagaatttcaatgaattgcagtgtgtcg |
597 |
Q |
| |
|
||||||||| |||| |||||||||||||| |||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
9329263 |
aagtcaaaggcaaccaaatggttgaaagtagcaaagttgatgcataagaggggaacatgtgaagagaacatggagaatttcaatgaattggagtgtgtgg |
9329362 |
T |
|
| Q |
598 |
aagcatctttaagaaccctttcaagtgaaggttcaaatgttgcacatgaaaaatttgaggctttggagaatgcaattgaaagtatagaaaacggtttaga |
697 |
Q |
| |
|
|||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||| |
|
|
| T |
9329363 |
aagcatcttt------------aagtgaaggttctaatgttgcacatgaaagatttgaggctttggagaatgcagttgaaagtatagaaaatggtttaga |
9329450 |
T |
|
| Q |
698 |
gaatatatttaggtgtttggttaaaactagagtctgtcttttgaatatcatgactc |
753 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
9329451 |
aaatatatttaggcgtttggttaaaactagagtctgtcttttgaacatcatgactc |
9329506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 213 - 503
Target Start/End: Original strand, 9361027 - 9361314
Alignment:
| Q |
213 |
attaaagaaaatgttcaatcacttcactcttctcttagaaggagaaagggagattcaagcattgaaacaagtgtagccgaatataaattcttcacaaaga |
312 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
9361027 |
attaaagaaaatgttcaaacacttcactcttctcttagaaggagaaaaggagattcaagcattgaaaaaagtgtagcagaatataaattcttcacaaaga |
9361126 |
T |
|
| Q |
313 |
agatgaagaagaatgtcacaaagttgatcacatctttaaaacatatggaaactaaatttggagtttcttcacttttgaatcaagatcaagaccttgtcgc |
412 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||| || |
|
|
| T |
9361127 |
---tgaagaagaatgtcacaaagttgatcacatctttaaaacatatggaaactaaatttggagcttcctcacttttgaatcaagatcaagaaattgttgc |
9361223 |
T |
|
| Q |
413 |
agtgattacagttcttagagaggtcattaaaatgaacttgtctatctttcaatcagttttgtctttcttggttggatcttcatcaaagtca |
503 |
Q |
| |
|
|||||||||||||||||||||| ||||| ||| ||| |||||||||||||||| |||||||||||||||||||||| |||||||||||| |
|
|
| T |
9361224 |
agtgattacagttcttagagagatcattgcaataaacatgtctatctttcaatccattttgtctttcttggttggatcatcatcaaagtca |
9361314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 9 - 202
Target Start/End: Original strand, 9309977 - 9310170
Alignment:
| Q |
9 |
acatcaacatccacatctgattcaattaccactggcctttcctttcttgaagatttgtatatttctttggaagatattctcaacatgccatcaacacaaa |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
9309977 |
acatcaacatccacatctgattcaattaccactggcctttcctttcttgaagatttgtatatttctttggaagatcttctcaacatgtcatcaacacaaa |
9310076 |
T |
|
| Q |
109 |
aggttatttctcaccatcaaggtgagaaatttgtggaagaattgttggatggttcagtgaaagttttggatatatgtggcatcacaagggacac |
202 |
Q |
| |
|
||| ||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
9310077 |
aggctatttctcaccatcatggcgagaaatttgtcgaagaattgttggatggttcagtgaaagttttggatatttgtggcatcacaagggacac |
9310170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 522 - 829
Target Start/End: Original strand, 9361308 - 9361621
Alignment:
| Q |
522 |
aaagtgacaaatttgatgcaaaagagggtaacatgtgaagagaacatggagaatttcaatgaattgcagtgtgtcg------aagcatctttaagaaccc |
615 |
Q |
| |
|
||||| ||||| |||||||||||||||||| ||||||||||| | |||||||||||||||||||| || |||| | ||||||||||||||| | |
|
|
| T |
9361308 |
aaagtcacaaagttgatgcaaaagagggtagtatgtgaagagatcgtggagaatttcaatgaattgaagggtgtggtcgtggaagcatctttaagaaatc |
9361407 |
T |
|
| Q |
616 |
tttcaagtgaaggttcaaatgttgcacatgaaaaatttgaggctttggagaatgcaattgaaagtatagaaaacggtttagagaatatatttaggtgttt |
715 |
Q |
| |
|
||| |||||||||||| ||||||||||| ||| |||||||||||||||||| |||||||||| ||||||| ||||| |||||| ||||||| ||| |
|
|
| T |
9361408 |
ttttaagtgaaggttctaatgttgcacaaaaaagatttgaggctttggagaaagcaattgaaaagctagaaaatggtttggagaatgtatttagccattt |
9361507 |
T |
|
| Q |
716 |
ggttaaaactagagtctgtcttttgaatatcatgactctatcttagggatttgatgaggcttgaaaaattttgtacagttaatttgtatataaatactgt |
815 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||| ||||| || ||||||||||| | | |
|
|
| T |
9361508 |
aattaaaactagagtttgtcttttgaacatcatgactctatcttagaaatttgatgaggattgaaaaattttgcacagtcgatccgtatataaatattat |
9361607 |
T |
|
| Q |
816 |
atacaattcaatag |
829 |
Q |
| |
|
||||||||||||| |
|
|
| T |
9361608 |
gtacaattcaatag |
9361621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 212 - 346
Target Start/End: Complemental strand, 9307906 - 9307772
Alignment:
| Q |
212 |
gattaaagaaaatgttcaatcacttcactcttctcttagaaggagaaagggagattcaagcattgaaacaagtgtagccgaatataaattcttcacaaag |
311 |
Q |
| |
|
|||||| |||||||||||| |||| ||||| |||||||||||| ||| | |||| ||||||||||| ||||||||| ||||||| |||||| || | |
|
|
| T |
9307906 |
gattaaggaaaatgttcaagtactttactctgctcttagaaggataaaatgggattgaagcattgaaaaaagtgtagctaaatataacttcttctcagtg |
9307807 |
T |
|
| Q |
312 |
aagatgaagaagaatgtcacaaagttgatcacatc |
346 |
Q |
| |
|
|||||||||||||||| | |||||||||||||| |
|
|
| T |
9307806 |
aagatgaagaagaatgctaggaagttgatcacatc |
9307772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 219 - 346
Target Start/End: Complemental strand, 9355161 - 9355034
Alignment:
| Q |
219 |
gaaaatgttcaatcacttcactcttctcttagaaggagaaagggagattcaagcattgaaacaagtgtagccgaatataaattcttcacaaagaagatga |
318 |
Q |
| |
|
||||||||||| ||||| | ||| |||||||||||||||| | |||| ||||| ||| ||||||||| ||||||| || ||| ||| |||||||| |
|
|
| T |
9355161 |
gaaaatgttcaggcactttattctgctcttagaaggagaaaatgggattgaagcaacaaaaaaagtgtagctaaatataacttattctcaatgaagatga |
9355062 |
T |
|
| Q |
319 |
agaagaatgtcacaaagttgatcacatc |
346 |
Q |
| |
|
||||||||| | |||||||||||||| |
|
|
| T |
9355061 |
agaagaatgctaggaagttgatcacatc |
9355034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 553 - 610
Target Start/End: Original strand, 9289757 - 9289813
Alignment:
| Q |
553 |
catgtgaagagaacatggagaatttcaatgaattgcagtgtgtcgaagcatctttaag |
610 |
Q |
| |
|
|||||||||||||| || ||||||||||||| ||| ||||||| |||||||||||||| |
|
|
| T |
9289757 |
catgtgaagagaacttg-agaatttcaatgagttgtagtgtgtggaagcatctttaag |
9289813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 129; Significance: 3e-66; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 45 - 349
Target Start/End: Original strand, 31476587 - 31476891
Alignment:
| Q |
45 |
ctttcctttcttgaagatttgtatatttctttggaagatattctcaacatgccatcaacacaaaaggttatttctcaccatcaaggtgagaaatttgtgg |
144 |
Q |
| |
|
|||||||| ||||||||||||||||| || |||||||| ||||||||||| ||||||| ||| | || |||||||||||||||||||| |||| ||||| |
|
|
| T |
31476587 |
ctttccttgcttgaagatttgtatatgtcaatggaagatcttctcaacatggcatcaacccaacaagtgatttctcaccatcaaggtgaaaaatgtgtgg |
31476686 |
T |
|
| Q |
145 |
aagaattgttggatggttcagtgaaagttttggatatatgtggcatcacaagggacaccatgttacagattaaagaaaatgttcaatcacttcactcttc |
244 |
Q |
| |
|
|||| ||||||||| |||| ||| | | |||||||||||||||||||||||||||||||| || || | || |||||||||||| | ||||||||||| |
|
|
| T |
31476687 |
aagagttgttggatagttctatgagaatcttggatatatgtggcatcacaagggacaccattttgcaaaccaaggaaaatgttcaagcccttcactcttc |
31476786 |
T |
|
| Q |
245 |
tcttagaaggagaaagggagattcaagcattgaaacaagtgtagccgaatataaattcttcacaaagaagatgaagaagaatgtcacaaagttgatcaca |
344 |
Q |
| |
|
||| || || ||||| || |||||||| |||||| |||||| || ||||| |||||||||||||| |||||||| || ||||| | |||||||||||| |
|
|
| T |
31476787 |
tctaaggagaagaaaaggtgattcaagtgttgaaagaagtgtggcagaatacaaattcttcacaaaaaagatgaaaaaaaatgttaacaagttgatcaca |
31476886 |
T |
|
| Q |
345 |
tcttt |
349 |
Q |
| |
|
||||| |
|
|
| T |
31476887 |
tcttt |
31476891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 45 - 373
Target Start/End: Original strand, 31466741 - 31467069
Alignment:
| Q |
45 |
ctttcctttcttgaagatttgtatatttctttggaagatattctcaacatgccatcaacacaaaaggttatttctcaccatcaaggtgagaaatttgtgg |
144 |
Q |
| |
|
|||||||| ||||||| ||||||||||| ||||||||| ||||||||||| ||||||| ||| | || |||||||||||| ||||||||||| | | |
|
|
| T |
31466741 |
ctttccttgattgaagaattgtatatttcattggaagatcttctcaacatggcatcaacccaacaagtgatttctcaccatagaggtgagaaatgcattg |
31466840 |
T |
|
| Q |
145 |
aagaattgttggatggttcagtgaaagttttggatatatgtggcatcacaagggacaccatgttacagattaaagaaaatgttcaatcacttcactcttc |
244 |
Q |
| |
|
|||| |||||||| ||||| ||| | |||||||||| ||||||||||| | ||| || || | || || || |||||||||||| | |||||||||| |
|
|
| T |
31466841 |
aagaggtgttggatagttcaatgagaattttggatatttgtggcatcactaaggatacaattcttcaaatcaaggaaaatgttcaagcccttcactcttg |
31466940 |
T |
|
| Q |
245 |
tcttagaaggagaaagggagattcaagcattgaaacaagtgtagccgaatataaattcttcacaaagaagatgaagaagaatgtcacaaagttgatcaca |
344 |
Q |
| |
|
||| || || ||||| || |||||||| |||||| |||||| | ||||| ||||| |||||||| ||||||||| |||||||| |||||||||||| |
|
|
| T |
31466941 |
tctaaggagaagaaaaggtgattcaagtgttgaaagaagtgtggaagaatacaaatttttcacaaaactgatgaagaaaaatgtcaccaagttgatcaca |
31467040 |
T |
|
| Q |
345 |
tctttaaaacatatggaaactaaatttgg |
373 |
Q |
| |
|
||| || |||||||| | ||||||||| |
|
|
| T |
31467041 |
agtttgaagcatatggatagtaaatttgg |
31467069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 66 - 373
Target Start/End: Original strand, 31501972 - 31502279
Alignment:
| Q |
66 |
tatatttctttggaagatattctcaacatgccatcaacacaaaaggttatttctcaccatcaaggtgagaaatttgtggaagaattgttggatggttcag |
165 |
Q |
| |
|
|||||||| ||||| ||| ||||||||||| ||||||| ||| | || |||||||||||| ||||||||||| | ||||| |||||||| ||||| |
|
|
| T |
31501972 |
tatatttcattggatgatcttctcaacatggcatcaacccaacaagtgatttctcaccatagaggtgagaaatgcattgaagaggtgttggatagttcaa |
31502071 |
T |
|
| Q |
166 |
tgaaagttttggatatatgtggcatcacaagggacaccatgttacagattaaagaaaatgttcaatcacttcactcttctcttagaaggagaaagggaga |
265 |
Q |
| |
|
||| | |||||||||| ||||||||||| ||||| || || | || || || |||||||||||| | |||||||||| ||| || || ||||| || || |
|
|
| T |
31502072 |
tgagaattttggatatttgtggcatcactagggatacaattcttcaaatcaaggaaaatgttcaagcccttcactcttgtctaaggagaagaaaaggtga |
31502171 |
T |
|
| Q |
266 |
ttcaagcattgaaacaagtgtagccgaatataaattcttcacaaagaagatgaagaagaatgtcacaaagttgatcacatctttaaaacatatggaaact |
365 |
Q |
| |
|
|||||| |||||| |||||| | |||| |||||||||||||| |||||||| || ||||| | ||||||||||||||||| || || ||||| | | |
|
|
| T |
31502172 |
ttcaagtgttgaaataagtgtgacacaatacaaattcttcacaaaaaagatgaaaaaaaatgttaacaagttgatcacatctttgaagcaaatggatagt |
31502271 |
T |
|
| Q |
366 |
aaatttgg |
373 |
Q |
| |
|
|||||||| |
|
|
| T |
31502272 |
aaatttgg |
31502279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 638 - 709
Target Start/End: Original strand, 31467352 - 31467423
Alignment:
| Q |
638 |
tgcacatgaaaaatttgaggctttggagaatgcaattgaaagtatagaaaacggtttagagaatatatttag |
709 |
Q |
| |
|
||||||||||| ||| ||||||||||||||||||||||||||||| || || ||||||||||| ||||||| |
|
|
| T |
31467352 |
tgcacatgaaagattggaggctttggagaatgcaattgaaagtattgagaatggtttagagaacttatttag |
31467423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 640 - 682
Target Start/End: Original strand, 31477200 - 31477242
Alignment:
| Q |
640 |
cacatgaaaaatttgaggctttggagaatgcaattgaaagtat |
682 |
Q |
| |
|
||||||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
31477200 |
cacatgaaagattagaggctttggagaatgcaattgaaagtat |
31477242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 638 - 728
Target Start/End: Original strand, 31502562 - 31502652
Alignment:
| Q |
638 |
tgcacatgaaaaatttgaggctttggagaatgcaattgaaagtatagaaaacggtttagagaatatatttaggtgtttggttaaaactaga |
728 |
Q |
| |
|
||||||||||| ||| |||||||||||||| | |||||||||||| || || ||||| || || |||||||| | ||| ||||| ||||| |
|
|
| T |
31502562 |
tgcacatgaaagattggaggctttggagaaagtaattgaaagtattgagaatggtttggaaaacttatttaggcgcttgattaaatctaga |
31502652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 63; Significance: 6e-27; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 706 - 788
Target Start/End: Complemental strand, 10412798 - 10412716
Alignment:
| Q |
706 |
ttaggtgtttggttaaaactagagtctgtcttttgaatatcatgactctatcttagggatttgatgaggcttgaaaaattttg |
788 |
Q |
| |
|
||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||| |||| |
|
|
| T |
10412798 |
ttaggcgtttggttaaaactagagtcggtcttttgaatatcgtgactctatcttagggatttgatgaggattgaaaaaatttg |
10412716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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