View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5980_low_9 (Length: 418)

Name: NF5980_low_9
Description: NF5980
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5980_low_9
NF5980_low_9
[»] chr1 (18 HSPs)
chr1 (12-241)||(15154606-15154836)
chr1 (12-95)||(15142897-15142980)
chr1 (12-93)||(20435487-20435568)
chr1 (12-70)||(19751339-19751397)
chr1 (12-70)||(12020481-12020539)
chr1 (12-70)||(19751562-19751620)
chr1 (12-70)||(24277085-24277143)
chr1 (12-69)||(20435698-20435755)
chr1 (10-70)||(24277595-24277654)
chr1 (12-70)||(15154818-15154876)
chr1 (12-70)||(20514187-20514245)
chr1 (10-71)||(24277306-24277367)
chr1 (12-70)||(19911627-19911687)
chr1 (12-61)||(546385-546435)
chr1 (12-61)||(546488-546538)
chr1 (12-61)||(12098901-12098951)
chr1 (12-61)||(12099004-12099054)
chr1 (12-61)||(19911524-19911574)
[»] chr6 (18 HSPs)
chr6 (12-241)||(19011906-19012136)
chr6 (12-241)||(19019537-19019767)
chr6 (12-241)||(8667735-8667965)
chr6 (12-93)||(16688350-16688431)
chr6 (12-89)||(18929667-18929744)
chr6 (10-93)||(22467330-22467413)
chr6 (12-70)||(13727927-13727985)
chr6 (12-70)||(18929880-18929938)
chr6 (12-70)||(20090727-20090785)
chr6 (12-71)||(22467140-22467199)
chr6 (12-70)||(17997102-17997160)
chr6 (12-70)||(19019749-19019807)
chr6 (10-71)||(17997305-17997366)
chr6 (12-71)||(16688161-16688220)
chr6 (12-70)||(19573917-19573975)
chr6 (12-69)||(19012118-19012177)
chr6 (30-66)||(20090981-20091017)
chr6 (12-61)||(11694547-11694597)
[»] chr3 (29 HSPs)
chr3 (12-241)||(26900831-26901061)
chr3 (12-93)||(8854317-8854398)
chr3 (122-241)||(18560125-18560245)
chr3 (12-78)||(8854487-8854553)
chr3 (12-73)||(26901043-26901104)
chr3 (10-70)||(95017-95077)
chr3 (12-71)||(17601504-17601563)
chr3 (12-70)||(94797-94855)
chr3 (12-70)||(14561329-14561387)
chr3 (12-70)||(18560085-18560143)
chr3 (10-70)||(10813259-10813319)
chr3 (10-69)||(10813476-10813535)
chr3 (12-70)||(10774205-10774263)
chr3 (12-70)||(20009318-20009376)
chr3 (12-69)||(16091452-16091509)
chr3 (12-70)||(16091655-16091713)
chr3 (12-83)||(20009124-20009197)
chr3 (12-70)||(2692380-2692439)
chr3 (12-70)||(12206952-12207011)
chr3 (12-70)||(19803507-19803566)
chr3 (17-70)||(14433130-14433184)
chr3 (20-60)||(28426104-28426144)
chr3 (12-66)||(19803405-19803460)
chr3 (12-61)||(15926947-15926996)
chr3 (12-70)||(19777658-19777717)
chr3 (12-61)||(2692492-2692542)
chr3 (12-61)||(19789782-19789832)
chr3 (12-61)||(20009021-20009071)
chr3 (205-241)||(10774187-10774223)
[»] chr8 (35 HSPs)
chr8 (12-241)||(3302813-3303043)
chr8 (12-93)||(14676367-14676448)
chr8 (12-89)||(36281545-36281622)
chr8 (12-93)||(21408164-21408245)
chr8 (12-93)||(21802656-21802737)
chr8 (12-93)||(21834617-21834698)
chr8 (12-72)||(36281716-36281776)
chr8 (12-69)||(14676169-14676226)
chr8 (10-71)||(21938223-21938284)
chr8 (12-71)||(21834427-21834486)
chr8 (12-70)||(31710943-31711001)
chr8 (10-70)||(31710721-31710781)
chr8 (12-70)||(3302773-3302831)
chr8 (12-70)||(18977108-18977166)
chr8 (12-70)||(20132067-20132125)
chr8 (16-70)||(21938428-21938482)
chr8 (12-71)||(36602348-36602408)
chr8 (12-70)||(44754001-44754060)
chr8 (12-70)||(14369539-14369597)
chr8 (12-70)||(14370090-14370148)
chr8 (9-69)||(17526846-17526907)
chr8 (14-70)||(14369368-14369424)
chr8 (12-68)||(22191708-22191764)
chr8 (12-70)||(6-65)
chr8 (12-68)||(15280900-15280956)
chr8 (12-68)||(15461269-15461325)
chr8 (12-66)||(5009931-5009986)
chr8 (17-70)||(18977300-18977354)
chr8 (17-70)||(26905742-26905796)
chr8 (12-61)||(16078042-16078092)
chr8 (12-61)||(25547718-25547768)
chr8 (17-70)||(26905547-26905601)
chr8 (14-62)||(15280734-15280782)
chr8 (14-62)||(15461103-15461151)
chr8 (205-240)||(18977149-18977185)
[»] chr2 (12 HSPs)
chr2 (12-241)||(7311128-7311359)
chr2 (12-179)||(26120866-26121033)
chr2 (12-179)||(26126328-26126495)
chr2 (12-70)||(23696338-23696396)
chr2 (12-70)||(4876603-4876661)
chr2 (12-70)||(7311341-7311399)
chr2 (10-70)||(4876381-4876441)
chr2 (10-71)||(23696133-23696194)
chr2 (12-70)||(9001569-9001628)
chr2 (12-66)||(9001675-9001730)
chr2 (12-66)||(9001777-9001832)
chr2 (12-61)||(7395335-7395385)
[»] scaffold0202 (2 HSPs)
scaffold0202 (12-241)||(10627-10857)
scaffold0202 (12-70)||(10839-10897)
[»] chr5 (14 HSPs)
chr5 (12-89)||(38840473-38840550)
chr5 (12-72)||(38840319-38840379)
chr5 (12-70)||(8459985-8460043)
chr5 (12-70)||(26857694-26857752)
chr5 (12-70)||(26857917-26857975)
chr5 (12-70)||(40936418-40936476)
chr5 (12-70)||(32965592-32965650)
chr5 (10-70)||(40936213-40936273)
chr5 (12-70)||(40569843-40569902)
chr5 (12-69)||(15213108-15213167)
chr5 (20-61)||(43177263-43177304)
chr5 (12-61)||(40572679-40572729)
chr5 (12-61)||(40572886-40572936)
chr5 (12-61)||(40572989-40573039)
[»] chr7 (21 HSPs)
chr7 (12-83)||(23522536-23522608)
chr7 (336-399)||(24277541-24277604)
chr7 (12-70)||(11544549-11544607)
chr7 (10-71)||(23522757-23522818)
chr7 (12-70)||(5328799-5328857)
chr7 (12-66)||(11099969-11100023)
chr7 (12-70)||(11527145-11527203)
chr7 (12-70)||(44359943-44360001)
chr7 (13-70)||(11544328-11544385)
chr7 (12-70)||(15828867-15828926)
chr7 (12-70)||(37279093-37279152)
chr7 (12-70)||(5328604-5328663)
chr7 (12-66)||(15828765-15828820)
chr7 (12-66)||(37278991-37279046)
chr7 (12-66)||(37283179-37283234)
chr7 (12-66)||(362415-362469)
chr7 (14-66)||(357768-357821)
chr7 (12-61)||(5328501-5328551)
chr7 (12-61)||(5332826-5332876)
chr7 (205-241)||(5328780-5328817)
chr7 (20-61)||(9068823-9068864)
[»] scaffold0878 (3 HSPs)
scaffold0878 (12-70)||(1649-1707)
scaffold0878 (12-70)||(4061-4119)
scaffold0878 (12-56)||(1439-1484)
[»] scaffold0139 (2 HSPs)
scaffold0139 (12-70)||(3157-3215)
scaffold0139 (13-70)||(3333-3390)
[»] scaffold0037 (1 HSPs)
scaffold0037 (12-70)||(20795-20853)
[»] chr4 (14 HSPs)
chr4 (12-70)||(23881950-23882008)
chr4 (10-70)||(27788645-27788705)
chr4 (12-70)||(725809-725867)
chr4 (12-70)||(10757060-10757118)
chr4 (12-70)||(10970231-10970289)
chr4 (12-70)||(23882176-23882234)
chr4 (12-70)||(27788867-27788925)
chr4 (10-71)||(23881745-23881806)
chr4 (12-71)||(20503021-20503081)
chr4 (10-61)||(52388654-52388706)
chr4 (12-69)||(28924967-28925025)
chr4 (17-70)||(726003-726057)
chr4 (12-61)||(726115-726165)
chr4 (205-241)||(725849-725886)
[»] scaffold0320 (2 HSPs)
scaffold0320 (12-71)||(11842-11901)
scaffold0320 (13-71)||(11630-11688)
[»] scaffold0369 (1 HSPs)
scaffold0369 (12-70)||(7370-7428)
[»] scaffold0179 (2 HSPs)
scaffold0179 (12-70)||(27313-27371)
scaffold0179 (10-71)||(27108-27169)
[»] scaffold1555 (1 HSPs)
scaffold1555 (12-71)||(1161-1221)
[»] scaffold0010 (2 HSPs)
scaffold0010 (12-70)||(244862-244921)
scaffold0010 (12-66)||(244968-245023)
[»] scaffold0076 (1 HSPs)
scaffold0076 (15-70)||(49566-49622)
[»] scaffold0013 (2 HSPs)
scaffold0013 (12-70)||(133742-133801)
scaffold0013 (12-70)||(138271-138330)
[»] scaffold0023 (1 HSPs)
scaffold0023 (12-70)||(149694-149752)
[»] scaffold0001 (2 HSPs)
scaffold0001 (12-70)||(30144-30203)
scaffold0001 (12-70)||(35451-35510)
[»] scaffold0088 (1 HSPs)
scaffold0088 (8-69)||(36231-36293)


Alignment Details
Target: chr1 (Bit Score: 175; Significance: 4e-94; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 12 - 241
Target Start/End: Original strand, 15154606 - 15154836
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctgaagaatagatttaggcggctatgga-gtctgtag 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | | || ||||||||    
T  15154606 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctaaagaatagatttaggcgggttttgaagtctgtag 15154705  T
Q  111 cgtggcgatgccttataggataacgcgcccaattttcacaaactttctgaagaacctcttaggtccctacagagggtgtttaagtcctccatgtgggtct 210  Q
    |||||||| | |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||     
T  15154706 cgtggcgacgtcttataggataacgcgcccaatcttcacagactttctgaagaacctcttaggtccctacagagggtgtttaagtccttcccgtgggtcc 15154805  T
Q  211 ctaaactcttaggaatataatgacggtccac 241  Q
    |||||||||||||||||||||||||||||||    
T  15154806 ctaaactcttaggaatataatgacggtccac 15154836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 15142897 - 15142980
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctgaagaatagatttaggcgg 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15142897 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctaaagaatagatttaggcgg 15142980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 20435487 - 20435568
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctgaagaatagatttaggc 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  20435487 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgcggtgctttagagctggagaatagatttaggc 20435568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 19751397 - 19751339
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19751397 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 19751339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 12020481 - 12020539
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12020481 gaattttatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 12020539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 19751620 - 19751562
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  19751620 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggtgtggtgcttt 19751562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 24277085 - 24277143
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24277085 gaatattatgacggtccacagcccccaagcacaagtcttggcacaaggcgtggtgcttt 24277143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 20435698 - 20435755
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctt 69  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20435698 gaatattatgacggtccacagctcccaagcacaagtcttggtacaaggcgtggtgctt 20435755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 24277595 - 24277654
Alignment:
Q  10 aagaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24277595 aagaatattatgacggtccacagcccc-aagcacaagtcttggtacaaggcgtggtgcttt 24277654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 15154818 - 15154876
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  15154818 gaatataatgacggtccacagcccctaagcacaagtcttggtacaaggcgtggtgcttt 15154876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 20514245 - 20514187
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  20514245 gaatattatgacggtccacagcccccaagcacaagtcttggcacaagacgtggtgcttt 20514187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 24277306 - 24277367
Alignment:
Q  10 aagaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttta 71  Q
    |||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24277306 aagaatataataacggtccacagcccccaagcacgagtcttggtacaaggcgtggtgcttta 24277367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 19911627 - 19911687
Alignment:
Q  12 gaatattatgacggtccacagccccc--aagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    ||||||||||||||||||||||||||  | |||| || |||||||||||||||||||||||    
T  19911627 gaatattatgacggtccacagccccccaatgcacgaggcttggtacaaggcgtggtgcttt 19911687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 546385 - 546435
Alignment:
Q  12 gaatattatgacggtccacag-cccccaagcacaagtcttggtacaaggcg 61  Q
    ||||||||||||||||||||| ||||||||||| || ||||| ||||||||    
T  546385 gaatattatgacggtccacagccccccaagcacgaggcttggaacaaggcg 546435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 546488 - 546538
Alignment:
Q  12 gaatattatgacggtccacag-cccccaagcacaagtcttggtacaaggcg 61  Q
    ||||||||||||||||||||| ||||||||||| || ||||| ||||||||    
T  546488 gaatattatgacggtccacagccccccaagcacgaggcttggaacaaggcg 546538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 12098901 - 12098951
Alignment:
Q  12 gaatattatgacggtccacag-cccccaagcacaagtcttggtacaaggcg 61  Q
    ||||||||||||||||||||| ||||||||||| || ||||| ||||||||    
T  12098901 gaatattatgacggtccacagccccccaagcacgaggcttggaacaaggcg 12098951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 12099004 - 12099054
Alignment:
Q  12 gaatattatgacggtccacag-cccccaagcacaagtcttggtacaaggcg 61  Q
    ||||||||||||||||||||| ||||||||||| || ||||| ||||||||    
T  12099004 gaatattatgacggtccacagccccccaagcacgaggcttggaacaaggcg 12099054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 19911524 - 19911574
Alignment:
Q  12 gaatattatgacggtccacag-cccccaagcacaagtcttggtacaaggcg 61  Q
    ||||||||||||||||||||| ||||||||||| || ||||| ||||||||    
T  19911524 gaatattatgacggtccacagccccccaagcacgaggcttggaacaaggcg 19911574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 171; Significance: 1e-91; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 12 - 241
Target Start/End: Original strand, 19011906 - 19012136
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctgaagaatagatttaggcg-gctatggagtctgtag 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | | ||| ||||||||    
T  19011906 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctgaagaataaatttaggcgagttttggggtctgtag 19012005  T
Q  111 cgtggcgatgccttataggataacgcgcccaattttcacaaactttctgaagaacctcttaggtccctacagagggtgtttaagtcctccatgtgggtct 210  Q
    |||||||  | |||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||     
T  19012006 cgtggcgtcgtcttataggataacgcgcccaatcttcacagactttctgaaaaacctcttaggtccctacatagggtgtttaagtcctccctgtgggtcc 19012105  T
Q  211 ctaaactcttaggaatataatgacggtccac 241  Q
    |||||||||||||||||||||||||||||||    
T  19012106 ctaaactcttaggaatataatgacggtccac 19012136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 12 - 241
Target Start/End: Original strand, 19019537 - 19019767
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctgaagaatagatttaggcggctatgga-gtctgtag 110  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| | | || ||||||||    
T  19019537 gaatattatgacagtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctaaagaatatatttaggcgggttttgaagtctgtag 19019636  T
Q  111 cgtggcgatgccttataggataacgcgcccaattttcacaaactttctgaagaacctcttaggtccctacagagggtgtttaagtcctccatgtgggtct 210  Q
    |||||||| | |||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||     
T  19019637 cgtggcgacgtcttataggataacgcgcccaatcttcacagactttctaaagaacctcttaggtccctacagagggtgtttaagtccttcctgtgggtcc 19019736  T
Q  211 ctaaactcttaggaatataatgacggtccac 241  Q
    |||||||||||||||||||||||||||||||    
T  19019737 ctaaactcttaggaatataatgacggtccac 19019767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 12 - 241
Target Start/End: Complemental strand, 8667965 - 8667735
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctgaagaatagatttaggc-ggctatggagtctgtag 110  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| || | || |||||||||    
T  8667965 gaatattatgacggtccacagcccccaagcacaagtattggtacaaggcgtggtgctttagagctaaagaatagatttaggcaggttttgaagtctgtag 8667866  T
Q  111 cgtggcgatgccttataggataacgcgcccaattttcacaaactttctgaagaacctcttaggtccctacagagggtgtttaagtcctccatgtgggtct 210  Q
    |||||||| | |||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||| ||| |||||||||||||| | ||||||||     
T  8667865 cgtggcgacgtcttataggataacgcgcccaatcttcacagactttctgaagaaccttttaggtccctaaagatggtgtttaagtccttcctgtgggtcc 8667766  T
Q  211 ctaaactcttaggaatataatgacggtccac 241  Q
    |||||||||||||||||||||||||||||||    
T  8667765 ctaaactcttaggaatataatgacggtccac 8667735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 16688431 - 16688350
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctgaagaatagatttaggc 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  16688431 gaatattatgacggtccacagcccccaagcacaagtcttggtacaagacgtggtgctttagagctgaagaaaagatttaggc 16688350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 18929667 - 18929744
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctgaagaatagattt 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  18929667 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttaaagctgatgaatagattt 18929744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 22467413 - 22467330
Alignment:
Q  10 aagaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctgaagaatagatttaggc 93  Q
    |||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  22467413 aagaatattatgacagtccacaacccccaagcacaagtgttggtacaaggcgtggtgctttaaagctgaagaatagatttaggc 22467330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 13727927 - 13727985
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13727927 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 13727985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 18929880 - 18929938
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18929880 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 18929938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 20090727 - 20090785
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20090727 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 20090785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 22467199 - 22467140
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttta 71  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22467199 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgtttta 22467140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 17997102 - 17997160
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17997102 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggttcttt 17997160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 19019749 - 19019807
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19019749 gaatataatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 19019807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 17997305 - 17997366
Alignment:
Q  10 aagaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttta 71  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  17997305 aagaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcatggtgtttta 17997366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 16688220 - 16688161
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttta 71  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  16688220 gaatattatgacggtccatagcccccaagcacaagtcttggtacaagacgtggtgcttta 16688161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 19573917 - 19573975
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  19573917 gaatattatgacggaccatagcccccaagcacaagtcttggcacaaggcgtggtgcttt 19573975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 19012118 - 19012177
Alignment:
Q  12 gaatattatgacggtccaca--gcccccaagcacaagtcttggtacaaggcgtggtgctt 69  Q
    |||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  19012118 gaatataatgacggtccacacagcccccaagcacaagtcttggtacaaggcgtggtgctt 19012177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 20090981 - 20091017
Alignment:
Q  30 cagcccccaagcacaagtcttggtacaaggcgtggtg 66  Q
    |||||||||||||||||||||||| ||||||||||||    
T  20090981 cagcccccaagcacaagtcttggttcaaggcgtggtg 20091017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 11694597 - 11694547
Alignment:
Q  12 gaatattatgacggtccacagc-ccccaagcacaagtcttggtacaaggcg 61  Q
    |||||||||||||||||||||| |||||||||| || ||||| ||||||||    
T  11694597 gaatattatgacggtccacagccccccaagcacgaggcttggaacaaggcg 11694547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 171; Significance: 1e-91; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 12 - 241
Target Start/End: Original strand, 26900831 - 26901061
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctgaagaatagatttaggcggctatgga-gtctgtag 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | | || ||||||||    
T  26900831 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctaaagaatagatttaggcgggttttgaagtctgtag 26900930  T
Q  111 cgtggcgatgccttataggataacgcgcccaattttcacaaactttctgaagaacctcttaggtccctacagagggtgtttaagtcctccatgtgggtct 210  Q
    ||||||||   |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||     
T  26900931 cgtggcgacttcttataggataacgcgcccaatcttcacagactttctgaagaacctcttaggtccctacagatggtgtttaagtccttcctgtgggtcc 26901030  T
Q  211 ctaaactcttaggaatataatgacggtccac 241  Q
    |||||||||||||||||||||||||||||||    
T  26901031 ctaaactcttaggaatataatgacggtccac 26901061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 8854317 - 8854398
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctgaagaatagatttaggc 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  8854317 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttaaagctgaagaatagatttaggc 8854398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 18560245 - 18560125
Alignment:
Q  122 cttataggataacgcgcccaattttcacaaactttctgaagaacctcttaggtccctacagagggt-gtttaagtcctccatgtgggtctctaaactctt 220  Q
    |||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||  |||||||||| | |||||||| |||| |||||    
T  18560245 cttatatgataacgcgcccaatcttcacagactttctgaagaacctcttaggtccctacagatggtattttaagtccttcctgtgggtccctaagctctt 18560146  T
Q  221 aggaatataatgacggtccac 241  Q
    |||||||||||||||||||||    
T  18560145 aggaatataatgacggtccac 18560125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 8854487 - 8854553
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctga 78  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  8854487 gaatattatgacggtccacagcccccaaccacaagtcttggtacaaggcgtggtgctttaaagctga 8854553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 26901043 - 26901104
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttaga 73  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26901043 gaatataatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttaga 26901104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 95017 - 95077
Alignment:
Q  10 aagaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  95017 aagaatataatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 95077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 17601563 - 17601504
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttta 71  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17601563 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgtttta 17601504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 94797 - 94855
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  94797 gaatattatgacggtccacagcccccaagcacaaatcttggtacaaggcgtggtgcttt 94855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 14561329 - 14561387
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14561329 gaatattgtgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 14561387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 18560143 - 18560085
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18560143 gaatataatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 18560085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 10813259 - 10813319
Alignment:
Q  10 aagaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10813259 aagaatattataacggtccacagcccccaagcacaagtcttggtacaaggcgtggtacttt 10813319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 10813476 - 10813535
Alignment:
Q  10 aagaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctt 69  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  10813476 aagaatattataatggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctt 10813535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 10774205 - 10774263
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10774205 gaatataatgacggtccacagccccaaagcacaagtcttggtacaaggcgtggtgcttt 10774263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 20009318 - 20009376
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20009318 gaatataatgacggcccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 20009376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 16091509 - 16091452
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctt 69  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  16091509 gaatattatgacggtccatagcccccaagcacaagtcttggcacaaggcgtggtgctt 16091452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 16091713 - 16091655
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||    
T  16091713 gaatattatgacggtccatagcccccaagcacaagtcttggcacaagacgtggtgcttt 16091655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 20009124 - 20009197
Alignment:
Q  12 gaatattatgacggtccacagccc-ccaagcacaagtcttggtacaaggcgtggtgc-tttagagctgaagaat 83  Q
    |||||||||||||||||||||||| |||||||| || ||||| |||||||||||||| |||| |||||||||||    
T  20009124 gaatattatgacggtccacagccctccaagcacgaggcttggaacaaggcgtggtgcttttaaagctgaagaat 20009197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 2692439 - 2692380
Alignment:
Q  12 gaatattatgacggtccacagccccc-aagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||||||||||| |||||| || ||||| |||||||||||||||||    
T  2692439 gaatattatgacggtccacagccccccaagcacgaggcttggaacaaggcgtggtgcttt 2692380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 12206952 - 12207011
Alignment:
Q  12 gaatattatgacggtccacagccc-ccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||||||||| |||||||  |||||||| |||||||||||||||||    
T  12206952 gaatattatgacggtccacagcccaccaagcatgagtcttggaacaaggcgtggtgcttt 12207011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 19803507 - 19803566
Alignment:
Q  12 gaatattatgacggtccacag-cccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    ||||||||||||||||||||| ||||||||| | || |||||||||||||||||||||||    
T  19803507 gaatattatgacggtccacagccccccaagcgcgaggcttggtacaaggcgtggtgcttt 19803566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 14433184 - 14433130
Alignment:
Q  17 ttatgacggtccacagccc-ccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    ||||||||||||||||||| ||||||||||||||||| || ||||||||||||||    
T  14433184 ttatgacggtccacagcccaccaagcacaagtcttggaacgaggcgtggtgcttt 14433130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 28426144 - 28426104
Alignment:
Q  20 tgacggtccacagcccccaagcacaagtcttggtacaaggc 60  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  28426144 tgacggtccacagcccccaagcacaagtcttgggacaaggc 28426104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 19803405 - 19803460
Alignment:
Q  12 gaatattatgacggtccacagccc-ccaagcacaagtcttggtacaaggcgtggtg 66  Q
    |||||||||||||||||||||||| |||||||| || ||||| |||||||||||||    
T  19803405 gaatattatgacggtccacagccctccaagcacgaggcttggaacaaggcgtggtg 19803460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 15926947 - 15926996
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcg 61  Q
    ||||||||||| ||| |||||||||||||||| |||||||| ||||||||    
T  15926947 gaatattatgaaggttcacagcccccaagcacgagtcttgggacaaggcg 15926996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 19777658 - 19777717
Alignment:
Q  12 gaatattatgacggtccacagcccc-caagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||| ||||||||||||||| |||| ||||||| || ||||| |||||||||||||||||    
T  19777658 gaattttatgacggtccacaaccccccaagcacgaggcttggaacaaggcgtggtgcttt 19777717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 2692542 - 2692492
Alignment:
Q  12 gaatattatgacggtccacagc-ccccaagcacaagtcttggtacaaggcg 61  Q
    |||||||||||||||||||||| |||||||||| || ||||| ||||||||    
T  2692542 gaatattatgacggtccacagccccccaagcacgaggcttggaacaaggcg 2692492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 19789832 - 19789782
Alignment:
Q  12 gaatattatgacggtccacagc-ccccaagcacaagtcttggtacaaggcg 61  Q
    |||||||||||||||||||||| |||||||||| || ||||| ||||||||    
T  19789832 gaatattatgacggtccacagccccccaagcacgaggcttggaacaaggcg 19789782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 20009021 - 20009071
Alignment:
Q  12 gaatattatgacggtccacagccc-ccaagcacaagtcttggtacaaggcg 61  Q
    |||||||||||||||||||||||| |||||||| || ||||| ||||||||    
T  20009021 gaatattatgacggtccacagccctccaagcacgaggcttggaacaaggcg 20009071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 241
Target Start/End: Original strand, 10774187 - 10774223
Alignment:
Q  205 gggtctctaaactcttaggaatataatgacggtccac 241  Q
    ||||||||||||| | |||||||||||||||||||||    
T  10774187 gggtctctaaactttgaggaatataatgacggtccac 10774223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 167; Significance: 3e-89; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 12 - 241
Target Start/End: Complemental strand, 3303043 - 3302813
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctgaagaatagatttaggcggctatgga-gtctgtag 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | | || ||||||||    
T  3303043 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctaaagaatagatttaggcgggttttgaagtctgtag 3302944  T
Q  111 cgtggcgatgccttataggataacgcgcccaattttcacaaactttctgaagaacctcttaggtccctacagagggtgtttaagtcctccatgtgggtct 210  Q
    |||||||| | ||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||| | |||||||||||| | ||||||||     
T  3302943 cgtggcgacgtcttataggataacgcacccaatcttcacagactttctgaagaacctcttaggtccctacagatgttgtttaagtccttcctgtgggtcc 3302844  T
Q  211 ctaaactcttaggaatataatgacggtccac 241  Q
    |||||||||||||||||||||||||||||||    
T  3302843 ctaaactcttaggaatataatgacggtccac 3302813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 14676448 - 14676367
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctgaagaatagatttaggc 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14676448 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctggagaatagatttaggc 14676367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 36281545 - 36281622
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctgaagaatagattt 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  36281545 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctgaagaaaagattt 36281622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 21408245 - 21408164
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctgaagaatagatttaggc 93  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||    
T  21408245 gaatattatgacggtccacagcccccaagcacaagccttggtacaaggcgtggtgctttaaagctgaagaacagatttaggc 21408164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 21802737 - 21802656
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctgaagaatagatttaggc 93  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||    
T  21802737 gaatattatgacggtccacagcccccaagcacaagccttggtacaaggcgtggtgctttaaagctgaagaacagatttaggc 21802656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 21834698 - 21834617
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctgaagaatagatttaggc 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||    
T  21834698 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttaaagctgaaaaacagatttaggc 21834617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 36281716 - 36281776
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttag 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36281716 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttag 36281776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 14676226 - 14676169
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctt 69  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14676226 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctt 14676169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 21938284 - 21938223
Alignment:
Q  10 aagaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttta 71  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21938284 aagaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgtttta 21938223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 21834486 - 21834427
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttta 71  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21834486 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgtttta 21834427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 31711001 - 31710943
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31711001 gaatattatgatggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 31710943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 31710781 - 31710721
Alignment:
Q  10 aagaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  31710781 aagaatattatgacggtccatagcccccaagcacaagtcttggtacaaggcatggtgcttt 31710721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 3302831 - 3302773
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3302831 gaatataatgacggtccacaacccccaagcacaagtcttggtacaaggcgtggtgcttt 3302773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 18977166 - 18977108
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18977166 gaatataatgacggtccatagcccccaagcacaagtcttggtacaaggcgtggtgcttt 18977108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 20132067 - 20132125
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  20132067 gaatattatgacggtccatagcccccaagcacaagtcttggcacaaggcgtggtgcttt 20132125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 21938482 - 21938428
Alignment:
Q  16 attatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  21938482 attatgacggtccacagcccctaagcacaagtcttggtacaaggcgtggtgcttt 21938428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 36602408 - 36602348
Alignment:
Q  12 gaatattatgacggtccacagcc-cccaagcacaagtcttggtacaaggcgtggtgcttta 71  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  36602408 gaatattatgacggtccacagccacccaagcacaagtcttgatacaaggcgtggtgcttta 36602348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 44754060 - 44754001
Alignment:
Q  12 gaatattatgacggtccacagccccc-aagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  44754060 gaatattatgacagtccacagccccccaagcacaagtcttggtacaaggcgtggtgcttt 44754001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 14369597 - 14369539
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||    
T  14369597 gaatattatgacggtccatagcccccaagcacaagtcttggcacaagacgtggtgcttt 14369539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 14370148 - 14370090
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||    
T  14370148 gaatattatgacggtccatagcccccaagcacaagtcttggcacaagacgtggtgcttt 14370090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 17526846 - 17526907
Alignment:
Q  9 caagaatattatgacggtccacag-cccccaagcacaagtcttggtacaaggcgtggtgctt 69  Q
    |||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||    
T  17526846 caagaatattatgacggtccacagccccccaagcacaaatcttggaacaaggcgtggtgctt 17526907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 14369424 - 14369368
Alignment:
Q  14 atattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||    
T  14369424 atattatgacggtccatagcccccaagcacaagtcttggcacaagacgtggtgcttt 14369368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 22191708 - 22191764
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgct 68  Q
    ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  22191708 gaataatatgaaggtccacagcccccaagcacaagtcttgggacaaggcgtggtgct 22191764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 6 - 65
Alignment:
Q  12 gaatattatgacggtccacagccc-ccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||||||||| |||||||| |||||||| |||||||||| ||||||    
T  6 gaatattatgacggtccacagcccaccaagcacgagtcttggaacaaggcgtgatgcttt 65  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 15280956 - 15280900
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgct 68  Q
    ||||||||||| ||| || |||||||||||||||||||||| ||||||||| |||||    
T  15280956 gaatattatgatggttcatagcccccaagcacaagtcttgggacaaggcgtagtgct 15280900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 15461325 - 15461269
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgct 68  Q
    ||||||||||| ||| || |||||||||||||||||||||| ||||||||| |||||    
T  15461325 gaatattatgatggttcatagcccccaagcacaagtcttgggacaaggcgtagtgct 15461269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 5009931 - 5009986
Alignment:
Q  12 gaatattatgacggtccacagccc-ccaagcacaagtcttggtacaaggcgtggtg 66  Q
    |||||||||||||||||||||||| |||||||| || ||||| |||||||||||||    
T  5009931 gaatattatgacggtccacagccctccaagcacgaggcttggaacaaggcgtggtg 5009986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 18977354 - 18977300
Alignment:
Q  17 ttatgacggtccacagccccc-aagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    ||||||||||||||||||||| |||||| || ||||| |||||||||||||||||    
T  18977354 ttatgacggtccacagccccccaagcacgaggcttggaacaaggcgtggtgcttt 18977300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 26905742 - 26905796
Alignment:
Q  17 ttatgacggtccacagcccc-caagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||||| ||||||| || ||||| |||||||||||||||||    
T  26905742 ttatgacggtccacagccccccaagcacgaggcttggaacaaggcgtggtgcttt 26905796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 16078042 - 16078092
Alignment:
Q  12 gaatattatgacggtccacagccccc-aagcacaagtcttggtacaaggcg 61  Q
    ||||||||||||||| |||||||||| |||||| |||||||| ||||||||    
T  16078042 gaatattatgacggttcacagccccctaagcacgagtcttgggacaaggcg 16078092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 25547768 - 25547718
Alignment:
Q  12 gaatattatgacggtccacagccc-ccaagcacaagtcttggtacaaggcg 61  Q
    |||||||||||||||||||||||| |||||||| || ||||| ||||||||    
T  25547768 gaatattatgacggtccacagccctccaagcacgaggcttggaacaaggcg 25547718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 26905547 - 26905601
Alignment:
Q  17 ttatgacggtccacagcccc-caagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    ||||||||||| |||||||| ||||||| || ||||| |||||||||||||||||    
T  26905547 ttatgacggtcgacagccccccaagcacgaggcttggaacaaggcgtggtgcttt 26905601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 15280782 - 15280734
Alignment:
Q  14 atattatgacggtccacagcccccaagcacaagtcttggtacaaggcgt 62  Q
    |||| |||||||| || |||||||||||||||||||||  |||||||||    
T  15280782 atataatgacggttcatagcccccaagcacaagtcttgagacaaggcgt 15280734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 15461151 - 15461103
Alignment:
Q  14 atattatgacggtccacagcccccaagcacaagtcttggtacaaggcgt 62  Q
    |||| |||||||| || |||||||||||||||||||||  |||||||||    
T  15461151 atataatgacggttcatagcccccaagcacaagtcttgagacaaggcgt 15461103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 240
Target Start/End: Complemental strand, 18977185 - 18977149
Alignment:
Q  205 gggtctctaaactctt-aggaatataatgacggtcca 240  Q
    |||||||||||||||| ||||||||||||||||||||    
T  18977185 gggtctctaaactctttaggaatataatgacggtcca 18977149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 165; Significance: 4e-88; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 12 - 241
Target Start/End: Original strand, 7311128 - 7311359
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctgaagaatagatttaggcggctat--ggagtctgta 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |  | || |||||    
T  7311128 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctaaagaatagatttaggcgggtttttgaagactgta 7311227  T
Q  110 gcgtggcgatgccttataggataacgcgcccaattttcacaaactttctgaagaacctcttaggtccctacagagggtgtttaagtcctccatgtgggtc 209  Q
    || |||||| | |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||   ||||||||    
T  7311228 gcatggcgacgtcttataggataacgcgcccaatcttcacagactttctgaagaacctcttaggtccctacagagggtgtttaagtcctttctgtgggtc 7311327  T
Q  210 tctaaactcttaggaatataatgacggtccac 241  Q
     |||||||||||||||||||||||||||||||    
T  7311328 cctaaactcttaggaatataatgacggtccac 7311359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 26120866 - 26121033
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctgaagaatagatttaggcggctatggagtctgtagc 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  26120866 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctgaagaatagatttaggcggctatcgagtctgtagc 26120965  T
Q  112 gtggcgatgccttataggataacgcgcccaattttcacaaactttctgaagaacctcttaggtcccta 179  Q
    ||||||| | ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  26120966 gtggcgacgtcttataggataacgcacccaattttcacagactttctgaagaacctcttaggtcccta 26121033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 26126328 - 26126495
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctgaagaatagatttaggcggctatggagtctgtagc 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  26126328 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctgaagaatagatttaggcggctatcgagtctgtagc 26126427  T
Q  112 gtggcgatgccttataggataacgcgcccaattttcacaaactttctgaagaacctcttaggtcccta 179  Q
    ||||||| | ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  26126428 gtggcgacgtcttataggataacgcacccaattttcacagactttctgaagaacctcttaggtcccta 26126495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 23696396 - 23696338
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23696396 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 23696338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 4876661 - 4876603
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  4876661 gaatattatgatggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 4876603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 7311341 - 7311399
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7311341 gaatataatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 7311399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 4876441 - 4876381
Alignment:
Q  10 aagaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  4876441 aagaatattatgacggtccatagcccccaagcacaagtcttggtacaaggcatggtgcttt 4876381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 23696194 - 23696133
Alignment:
Q  10 aagaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttta 71  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  23696194 aagaatgttatgacggtccacagcccccaagcacaagtcttggtgcaaggcgtggtgtttta 23696133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 9001628 - 9001569
Alignment:
Q  12 gaatattatgacggtccacagccccc-aagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||    
T  9001628 gaatattatgacggtccacagccccccaagcacgaggcttggtacaaggcgtggtgcttt 9001569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 9001730 - 9001675
Alignment:
Q  12 gaatattatgacggtccacagccccc-aagcacaagtcttggtacaaggcgtggtg 66  Q
    |||||||||||||||||||||||||| |||||| || |||||||||||||||||||    
T  9001730 gaatattatgacggtccacagccccccaagcacgaggcttggtacaaggcgtggtg 9001675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 9001832 - 9001777
Alignment:
Q  12 gaatattatgacggtccacagccc-ccaagcacaagtcttggtacaaggcgtggtg 66  Q
    |||||||||||||||||||||||| |||||||| || ||||| |||||||||||||    
T  9001832 gaatattatgacggtccacagccctccaagcacgaggcttggaacaaggcgtggtg 9001777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 7395335 - 7395385
Alignment:
Q  12 gaatattatgacggtccacag-cccccaagcacaagtcttggtacaaggcg 61  Q
    ||||||||||||||||||||| ||||||||||| || ||||| ||||||||    
T  7395335 gaatattatgacggtccacagccccccaagcacgaggcttggaacaaggcg 7395385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 123; Significance: 5e-63; HSPs: 2)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 12 - 241
Target Start/End: Original strand, 10627 - 10857
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctgaagaatagatttaggcggctatgga-gtctgtag 110  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| | || |||||||||| ||||||| | |  | ||||||||    
T  10627 gaatattatgacggtccacagcccccaatcacaagtcttggtacaaggcgtgatgctttaaaactaaagaatagatctaggcgggtttttaagtctgtag 10726  T
Q  111 cgtggcgatgccttataggataacgcgcccaattttcacaaactttctgaagaacctcttaggtccctacagagggtgtttaagtcctccatgtgggtct 210  Q
    |||||||| | | |||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||| |||||||||| ||  |  |||||||     
T  10727 cgtggcgacgtcgtataggataacgcgcccaaacttcacagactttctgaagaacctcttaggtccctacagacggtgtttaagcccctccggtgggtcc 10826  T
Q  211 ctaaactcttaggaatataatgacggtccac 241  Q
    | |||||||||||||||| ||||||||||||    
T  10827 caaaactcttaggaatattatgacggtccac 10857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 10839 - 10897
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10839 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 10897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 8e-34; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 38840550 - 38840473
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctgaagaatagattt 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  38840550 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttagagctgaagaaaagattt 38840473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 38840379 - 38840319
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttag 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38840379 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgctttag 38840319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 8460043 - 8459985
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8460043 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 8459985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 26857694 - 26857752
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26857694 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 26857752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 26857917 - 26857975
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26857917 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 26857975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 40936476 - 40936418
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40936476 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 40936418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 32965650 - 32965592
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32965650 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggtgtggtgcttt 32965592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 40936273 - 40936213
Alignment:
Q  10 aagaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40936273 aagaatattacggcggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 40936213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 40569843 - 40569902
Alignment:
Q  12 gaatattatgacggtccacagcccc-caagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    ||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  40569843 gaatattatgacggtccacagccccccaagcacgaggcttggtacaaggcgtggtgcttt 40569902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 15213108 - 15213167
Alignment:
Q  12 gaatattatgacggtccacag--cccccaagcacaagtcttggtacaaggcgtggtgctt 69  Q
    |||||||||||||||||||||  ||||||||| |||||||||| |||||| |||||||||    
T  15213108 gaatattatgacggtccacagcccccccaagcgcaagtcttggaacaaggtgtggtgctt 15213167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 43177263 - 43177304
Alignment:
Q  20 tgacggtccacagcccccaagcacaagtcttggtacaaggcg 61  Q
    |||||||||||||||||||||||| |||||||| ||||||||    
T  43177263 tgacggtccacagcccccaagcacgagtcttgggacaaggcg 43177304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 40572679 - 40572729
Alignment:
Q  12 gaatattatgacggtccacag-cccccaagcacaagtcttggtacaaggcg 61  Q
    ||||||||||||||||||||| ||||||||||| || ||||| ||||||||    
T  40572679 gaatattatgacggtccacagccccccaagcacgaggcttggaacaaggcg 40572729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 40572886 - 40572936
Alignment:
Q  12 gaatattatgacggtccacag-cccccaagcacaagtcttggtacaaggcg 61  Q
    ||||||||||||||||||||| ||||||||||| || ||||| ||||||||    
T  40572886 gaatattatgacggtccacagccccccaagcacgaggcttggaacaaggcg 40572936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 40572989 - 40573039
Alignment:
Q  12 gaatattatgacggtccacag-cccccaagcacaagtcttggtacaaggcg 61  Q
    ||||||||||||||||||||| ||||||||||| || ||||| ||||||||    
T  40572989 gaatattatgacggtccacagccccccaagcacgaggcttggaacaaggcg 40573039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 5e-26; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 23522536 - 23522608
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgc-tttagagctgaagaat 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  23522536 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttttaaagctgaagaat 23522608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 24277541 - 24277604
Alignment:
Q  336 agacaatttttggcaagattttacttacctattgttcaaactttgaattaagagtcttgcttcc 399  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  24277541 agacaatttttggcaagattttacttatctattgttcaaactttgaattaagagttttgcttcc 24277604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 11544607 - 11544549
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11544607 gaattttatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 11544549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 23522757 - 23522818
Alignment:
Q  10 aagaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttta 71  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23522757 aagaatataataacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttta 23522818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 5328799 - 5328857
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  5328799 gaatataatgacggtccacagcccccaagcacaagtcttggtacacggcgtggtgcttt 5328857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 11100023 - 11099969
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtg 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11100023 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcatggtg 11099969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 11527203 - 11527145
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11527203 gaattttatgacgatccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 11527145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 44360001 - 44359943
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  44360001 gaatattatgacggtccatagcccccaagcacaagtcttggcacaaggcgtggtgcttt 44359943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 11544385 - 11544328
Alignment:
Q  13 aatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11544385 aatataataacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 11544328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 15828867 - 15828926
Alignment:
Q  12 gaatattatgacggtccacagcccc-caagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    ||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  15828867 gaatattatgacggtccacagccccccaagcacgaggcttggtacaaggcgtggtgcttt 15828926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 37279093 - 37279152
Alignment:
Q  12 gaatattatgacggtccacagcccc-caagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    ||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  37279093 gaatattatgacggtccacagccccccaagcacgaggcttggtacaaggcgtggtgcttt 37279152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 5328604 - 5328663
Alignment:
Q  12 gaatattatgacggtccacag-cccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    ||||||||||||||||||||| ||||||||||| ||  |||| |||||||||||||||||    
T  5328604 gaatattatgacggtccacagccccccaagcacgaggattggaacaaggcgtggtgcttt 5328663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 15828765 - 15828820
Alignment:
Q  12 gaatattatgacggtccacagccc-ccaagcacaagtcttggtacaaggcgtggtg 66  Q
    |||||||||||||||||||||||| |||||||| || ||||| |||||||||||||    
T  15828765 gaatattatgacggtccacagccctccaagcacgaggcttggaacaaggcgtggtg 15828820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 37278991 - 37279046
Alignment:
Q  12 gaatattatgacggtccacagccc-ccaagcacaagtcttggtacaaggcgtggtg 66  Q
    |||||||||||||||||||||||| |||||||| || ||||| |||||||||||||    
T  37278991 gaatattatgacggtccacagccctccaagcacgaggcttggaacaaggcgtggtg 37279046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 37283179 - 37283234
Alignment:
Q  12 gaatattatgacggtccacagccc-ccaagcacaagtcttggtacaaggcgtggtg 66  Q
    |||||||||||||||||||||||| |||||||| || ||||| |||||||||||||    
T  37283179 gaatattatgacggtccacagccctccaagcacgaggcttggaacaaggcgtggtg 37283234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 362415 - 362469
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtg 66  Q
    |||||||||||||||||||||||||||| ||| ||  |||| |||||||||||||    
T  362415 gaatattatgacggtccacagcccccaaacacgagggttggaacaaggcgtggtg 362469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 357768 - 357821
Alignment:
Q  14 atattatgacggtccacag-cccccaagcacaagtcttggtacaaggcgtggtg 66  Q
    ||||||||||||||||||| ||||||||||| || ||||| |||||||||||||    
T  357768 atattatgacggtccacagccccccaagcacgaggcttggaacaaggcgtggtg 357821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 5328501 - 5328551
Alignment:
Q  12 gaatattatgacggtccacag-cccccaagcacaagtcttggtacaaggcg 61  Q
    ||||||||||||||||||||| ||||||||||| || ||||| ||||||||    
T  5328501 gaatattatgacggtccacagccccccaagcacgaggcttggaacaaggcg 5328551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 5332826 - 5332876
Alignment:
Q  12 gaatattatgacggtccacag-cccccaagcacaagtcttggtacaaggcg 61  Q
    ||||||||||||||||||||| ||||||||||| || ||||| ||||||||    
T  5332826 gaatattatgacggtccacagccccccaagcacgaggcttggaacaaggcg 5332876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 241
Target Start/End: Original strand, 5328780 - 5328817
Alignment:
Q  205 gggtctctaaactctt-aggaatataatgacggtccac 241  Q
    |||||||||||||||| |||||||||||||||||||||    
T  5328780 gggtctctaaactctttaggaatataatgacggtccac 5328817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 9068864 - 9068823
Alignment:
Q  20 tgacggtccacagcccccaagcacaagtcttggtacaaggcg 61  Q
    ||||||| |||||||||||||||| |||||||| ||||||||    
T  9068864 tgacggttcacagcccccaagcacgagtcttgggacaaggcg 9068823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 59; Significance: 7e-25; HSPs: 3)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 1707 - 1649
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1707 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 1649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 4119 - 4061
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4119 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 4061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 1484 - 1439
Alignment:
Q  12 gaatattatgacggtccacagccc-ccaagcacaagtcttggtaca 56  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  1484 gaatattatgacggtccacagccctccaagcacaagtcttggtaca 1439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 3157 - 3215
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3157 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 3215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 3333 - 3390
Alignment:
Q  13 aatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3333 aatataatgacggtccacagcccccaaacacaagtcttggtacaaggcgtggtgcttt 3390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 20795 - 20853
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20795 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 20853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 7e-25; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 23882008 - 23881950
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23882008 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 23881950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 27788705 - 27788645
Alignment:
Q  10 aagaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27788705 aagaacattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 27788645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 725867 - 725809
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  725867 gaatataatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 725809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 10757118 - 10757060
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10757118 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcatggtgcttt 10757060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 10970289 - 10970231
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10970289 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcatggtgcttt 10970231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 23882234 - 23882176
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  23882234 gaatattatgacggtccccagcccccaagcacaagtcttggtacaaggcgtggtgcttt 23882176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 27788925 - 27788867
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27788925 gaatattatgacggttcacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 27788867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 23881806 - 23881745
Alignment:
Q  10 aagaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttta 71  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23881806 aagaatattaggacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgtttta 23881745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 20503081 - 20503021
Alignment:
Q  12 gaatattatgacggtccacagcccc-caagcacaagtcttggtacaaggcgtggtgcttta 71  Q
    |||||||||||  |||||||||||| |||||||||| ||||||||||||| ||||||||||    
T  20503081 gaatattatgattgtccacagcccctcaagcacaagccttggtacaaggcatggtgcttta 20503021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 52388654 - 52388706
Alignment:
Q  10 aagaatattatgacggtccacag-cccccaagcacaagtcttggtacaaggcg 61  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| ||||||||    
T  52388654 aagaatattatgacggtccacagccccccaagcacgagtcttgggacaaggcg 52388706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 28924967 - 28925025
Alignment:
Q  12 gaatattatgacggtccacagcccc-caagcacaagtcttggtacaaggcgtggtgctt 69  Q
    |||||||||||||||| ||| |||| |||||||||||||||| |||||||||| |||||    
T  28924967 gaatattatgacggtctacaaccccccaagcacaagtcttggaacaaggcgtgatgctt 28925025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 726057 - 726003
Alignment:
Q  17 ttatgacggtccacagccccc-aagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    ||||||||||||||| ||||| |||||| || ||||| |||||||||||||||||    
T  726057 ttatgacggtccacaaccccccaagcacgaggcttggaacaaggcgtggtgcttt 726003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 726165 - 726115
Alignment:
Q  12 gaatattatgacggtccacagccc-ccaagcacaagtcttggtacaaggcg 61  Q
    |||||||||||||||||||||||| |||||||| || ||||| ||||||||    
T  726165 gaatattatgacggtccacagccctccaagcacgaggcttggaacaaggcg 726115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 241
Target Start/End: Complemental strand, 725886 - 725849
Alignment:
Q  205 gggtctctaaactctt-aggaatataatgacggtccac 241  Q
    |||||||||||||||| |||||||||||||||||||||    
T  725886 gggtctctaaactctttaggaatataatgacggtccac 725849  T

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Target: scaffold0320 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 11901 - 11842
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttta 71  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  11901 gaatattatgacggtccaaagcccccaagcacaagtcttggtacaaggcgtggtgcttta 11842  T

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Target: scaffold0320; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 11688 - 11630
Alignment:
Q  13 aatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttta 71  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  11688 aatataatgacggtccacaacccccaagcacaggtcttggtacaaggcgtggtgcttta 11630  T

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Target: scaffold0369 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 7428 - 7370
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7428 gaatattatgacggtccacagcccccaagcacaagtcttagtacaaggcgtggtgcttt 7370  T

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Target: scaffold0179 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 27371 - 27313
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  27371 gaatattatgacggtccacaacccccaaacacaagtcttggtacaaggcgtggtgcttt 27313  T

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Target: scaffold0179; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 27169 - 27108
Alignment:
Q  10 aagaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttta 71  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||    
T  27169 aagaatattatgacggttcacagcccccaagcacaagtcttggtacaaggcttggtgtttta 27108  T

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Target: scaffold1555 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold1555
Description:

Target: scaffold1555; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 1221 - 1161
Alignment:
Q  12 gaatattatgacggtccacagcc-cccaagcacaagtcttggtacaaggcgtggtgcttta 71  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  1221 gaatattatgacggtccacagccacccaagcacaagtcttgatacaaggcgtggtgcttta 1161  T

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Target: scaffold0010 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 244921 - 244862
Alignment:
Q  12 gaatattatgacggtccacagccccc-aagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||    
T  244921 gaatattatgacggtccacagccccccaagcacgaggcttggtacaaggcgtggtgcttt 244862  T

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Target: scaffold0010; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 245023 - 244968
Alignment:
Q  12 gaatattatgacggtccacagccc-ccaagcacaagtcttggtacaaggcgtggtg 66  Q
    |||||||||||||||||||||||| |||||||| || ||||| |||||||||||||    
T  245023 gaatattatgacggtccacagccctccaagcacgaggcttggaacaaggcgtggtg 244968  T

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Target: scaffold0076 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 49622 - 49566
Alignment:
Q  15 tattatgacggtccacagccc-ccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    ||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||    
T  49622 tattatgacggtccacagcccaccaagcacgagtcttggaacaaggcgtggtgcttt 49566  T

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Target: scaffold0013 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 133742 - 133801
Alignment:
Q  12 gaatattatgacggtccacagccc-ccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||||||||| ||||||||  ||||||| |||||||||||||||||    
T  133742 gaatattatgacggtccacagcccaccaagcacgggtcttggaacaaggcgtggtgcttt 133801  T

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Target: scaffold0013; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 138271 - 138330
Alignment:
Q  12 gaatattatgacggtccacagccc-ccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||||||||||| ||||||||  ||||||| |||||||||||||||||    
T  138271 gaatattatgacggtccacagcccaccaagcacgggtcttggaacaaggcgtggtgcttt 138330  T

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Target: scaffold0023 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 149752 - 149694
Alignment:
Q  12 gaatattatgacggtccacagcccccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||| ||||| |||||||||||||||||||||| || || |||||||||||    
T  149752 gaatattatgacagtccatagcccccaagcacaagtcttggcactagacgtggtgcttt 149694  T

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Target: scaffold0001 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 30203 - 30144
Alignment:
Q  12 gaatattatgacggtccacagccc-ccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||| ||||||| ||||| || |||||||| |||| ||||||||||||    
T  30203 gaatattatgacggtctacagcccaccaagtacgagtcttggaacaacgcgtggtgcttt 30144  T

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Target: scaffold0001; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 35510 - 35451
Alignment:
Q  12 gaatattatgacggtccacagccc-ccaagcacaagtcttggtacaaggcgtggtgcttt 70  Q
    |||||||||||||||| ||||||| ||||| || |||||||| |||| ||||||||||||    
T  35510 gaatattatgacggtctacagcccaccaagtacgagtcttggaacaacgcgtggtgcttt 35451  T

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Target: scaffold0088 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 36293 - 36231
Alignment:
Q  8 ccaagaatattatgacggtccac-agcccccaagcacaagtcttggtacaaggcgtggtgctt 69  Q
    ||||||||||||||||||||||| | ||||||  ||| |||||||| |||||| |||||||||    
T  36293 ccaagaatattatgacggtccacaaccccccattcacgagtcttgggacaaggtgtggtgctt 36231  T

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