View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5983_low_6 (Length: 392)
Name: NF5983_low_6
Description: NF5983
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5983_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 87 - 375
Target Start/End: Complemental strand, 39386090 - 39385801
Alignment:
| Q |
87 |
tcacacctaatgatgcgtcaaaatatgtgttttaagcagaacatttggtaggtgatgagaggtttgtttccatacgctagtggagaattacgaattgtaa |
186 |
Q |
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| T |
39386090 |
tcacccctaatgatacgtcaaaatatgtgttttaagtcgaacatttggtaggtgatgagaggtttgtttccatacgctagtggagaattacgaattgtaa |
39385991 |
T |
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| Q |
187 |
cagaatatgannnnnnnnnnaaaaa-ttggatacctctacataatggccacaaacaaaaaagccaaatggccatcaaacaaaaaccgaaacatattaatt |
285 |
Q |
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| T |
39385990 |
cagaatatgatttttttttaaaaaaattggatacctctacataatggccacaaacaaaaaagccaaatggccatcaaacaaaaaccgaaacatattaatt |
39385891 |
T |
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| Q |
286 |
agagaatggccaagctgaatggccgcaacgagcaacaaagctctcttttcaaaatttgaaggtgtagctgcatttctttgatgttgaatt |
375 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
39385890 |
agagaatggccaagctgaatggccgcaacgagcaacaaagctctcttttcaaaattttaaggtgtagctgcatttctttgatgttgaatt |
39385801 |
T |
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