View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5984_low_9 (Length: 415)

Name: NF5984_low_9
Description: NF5984
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5984_low_9
NF5984_low_9
[»] chr3 (10 HSPs)
chr3 (168-408)||(23427948-23428188)
chr3 (185-404)||(23399505-23399724)
chr3 (95-164)||(7490175-7490243)
chr3 (95-165)||(15847150-15847220)
chr3 (95-160)||(10309726-10309791)
chr3 (95-164)||(13516601-13516670)
chr3 (107-164)||(18072088-18072145)
chr3 (99-166)||(36551930-36551997)
chr3 (95-155)||(12900759-12900819)
chr3 (118-166)||(27442642-27442690)
[»] chr8 (13 HSPs)
chr8 (23-104)||(14979360-14979441)
chr8 (32-100)||(18803488-18803556)
chr8 (95-166)||(14979172-14979243)
chr8 (95-164)||(13783223-13783292)
chr8 (95-164)||(20463258-20463327)
chr8 (95-164)||(39323476-39323545)
chr8 (95-165)||(15334686-15334756)
chr8 (95-165)||(15423749-15423819)
chr8 (95-165)||(15515055-15515125)
chr8 (39-104)||(15423565-15423632)
chr8 (95-165)||(18803677-18803748)
chr8 (39-104)||(15334502-15334569)
chr8 (39-104)||(15514871-15514938)
[»] chr4 (5 HSPs)
chr4 (24-103)||(4104773-4104852)
chr4 (95-163)||(4104970-4105038)
chr4 (95-164)||(3498228-3498297)
chr4 (95-159)||(35186107-35186171)
chr4 (95-159)||(9265015-9265079)
[»] chr6 (11 HSPs)
chr6 (32-104)||(14964116-14964188)
chr6 (95-164)||(12353597-12353666)
chr6 (95-165)||(2068254-2068324)
chr6 (95-165)||(22215934-22216004)
chr6 (95-155)||(9190408-9190468)
chr6 (95-149)||(14288241-14288295)
chr6 (95-165)||(14964305-14964375)
chr6 (111-163)||(9881790-9881842)
chr6 (118-165)||(8883338-8883385)
chr6 (96-137)||(33594618-33594659)
chr6 (129-165)||(33594399-33594435)
[»] chr1 (5 HSPs)
chr1 (24-104)||(44717796-44717876)
chr1 (95-164)||(9327035-9327104)
chr1 (95-164)||(44717610-44717679)
chr1 (95-164)||(21859254-21859323)
chr1 (95-155)||(22919096-22919156)
[»] chr7 (10 HSPs)
chr7 (95-166)||(48631848-48631919)
chr7 (26-104)||(48631653-48631731)
chr7 (95-164)||(1847388-1847457)
chr7 (95-165)||(4486177-4486247)
chr7 (96-165)||(20657143-20657212)
chr7 (95-163)||(1844302-1844370)
chr7 (95-166)||(18195862-18195935)
chr7 (95-166)||(37079331-37079401)
chr7 (95-164)||(10371021-10371090)
chr7 (99-148)||(19388283-19388332)
[»] chr5 (8 HSPs)
chr5 (95-163)||(21300362-21300430)
chr5 (95-165)||(137973-138043)
chr5 (95-164)||(25644531-25644600)
chr5 (95-164)||(7201406-7201475)
chr5 (24-102)||(21300549-21300627)
chr5 (95-164)||(22065492-22065561)
chr5 (95-166)||(19021604-19021674)
chr5 (99-164)||(15613367-15613432)
[»] scaffold0464 (2 HSPs)
scaffold0464 (25-104)||(4311-4389)
scaffold0464 (95-154)||(4505-4564)
[»] scaffold1175 (1 HSPs)
scaffold1175 (95-165)||(1882-1952)
[»] scaffold0019 (1 HSPs)
scaffold0019 (95-162)||(111443-111510)
[»] chr2 (2 HSPs)
chr2 (95-166)||(20424638-20424709)
chr2 (107-166)||(11293847-11293906)
[»] scaffold0001 (1 HSPs)
scaffold0001 (95-163)||(52914-52982)
[»] scaffold0186 (1 HSPs)
scaffold0186 (137-166)||(2793-2822)


Alignment Details
Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 168 - 408
Target Start/End: Complemental strand, 23428188 - 23427948
Alignment:
Q  168 caatgttgtgactatctagaggttgttacaagtgtaccttgaagagaattgtcaaagtgaaggtctaacagccaaaaaatcatacttattatagttgcta 267  Q
    |||||||||||||||| |||||| |||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||  |||||||| |||||||||    
T  23428188 caatgttgtgactatccagaggtcgttacaagtgtaccttgaggagaattgtcagagtgaaggtctaatagccaaaaaattgtacttattgtagttgcta 23428089  T
Q  268 cgttaatcctttaggtttgattttgatgaagtttagtttgaatcatgtagtttttgttacattatcttagcttagtttgtaaaacaccctatagtctaaa 367  Q
    | |||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23428088 ccttaatcctctaggtttggttttgatgatgtttagtttgaatcatgtagtttttgttacattatcttagcttagtttgtaaaacaccctatagtctaaa 23427989  T
Q  368 tctctcatacctagtgtatcactccctgctttgagtataat 408  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  23427988 tctctcatacctagtgtggcactccctgctttgagtataat 23427948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 185 - 404
Target Start/End: Complemental strand, 23399724 - 23399505
Alignment:
Q  185 agaggttgttacaagtgtaccttgaagagaattgtcaaagtgaaggtctaacagccaaaaaatcatacttattatagttgctacgttaatcctttaggtt 284  Q
    |||||| ||||||||||| | |||| |||||||||| |||||||||||||||| |||||| ||| |||||| | |||||||||| |||||||||| || |    
T  23399724 agaggtcgttacaagtgtccgttgaggagaattgtccaagtgaaggtctaacaaccaaaatatcgtacttagtgtagttgctaccttaatcctttgggct 23399625  T
Q  285 tgattttgatgaagtttagtttgaatcatgtagtttttgttacattatcttagcttagtttgtaaaacaccctatagtctaaatctctcatacctagtgt 384  Q
    || ||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||  ||||    
T  23399624 tggttttgatgatgtttagtttgaatcatgtagtttttgttatattgtcttagcttagtttggaaaacaccctatagtctaaatctctcataccctgtgt 23399525  T
Q  385 atcactccctgctttgagta 404  Q
     |||||||||| ||||||||    
T  23399524 gtcactccctgttttgagta 23399505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 7490243 - 7490175
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtg 164  Q
    ||||||||||||||||||||||  |||||||||||||||||||| ||||||||||| |||||||||||||    
T  7490243 catttgcgacccttctaacagtcacaatcaaccattttaaaagttgcaaaatgcag-ttttcttgtagtg 7490175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 95 - 165
Target Start/End: Original strand, 15847150 - 15847220
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtga 165  Q
    |||||||||||||||||||||| ||||||| | |||||||  ||||||||||||  |||||||||||||||    
T  15847150 catttgcgacccttctaacagtcgcaatcatcaattttaacggtcgcaaaatgcgttttttcttgtagtga 15847220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 160
Target Start/End: Complemental strand, 10309791 - 10309726
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgt 160  Q
    ||||||||||||||||||||||  |||||   ||||||||||||||||||||||| ||||||||||    
T  10309791 catttgcgacccttctaacagtcacaatctgtcattttaaaagtcgcaaaatgcattttttcttgt 10309726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 13516670 - 13516601
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtg 164  Q
    |||||| ||||||||||||||| |||||||  ||||||||| ||| ||||||||| ||||||||||||||    
T  13516670 catttgtgacccttctaacagtcgcaatcagtcattttaaaggtcacaaaatgcattttttcttgtagtg 13516601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 164
Target Start/End: Complemental strand, 18072145 - 18072088
Alignment:
Q  107 ttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtg 164  Q
    |||||||||| ||||||| ||||||||||| |||||||||| |||||||||| |||||    
T  18072145 ttctaacagtcgcaatcagccattttaaaattcgcaaaatgtagtttttcttatagtg 18072088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 36551930 - 36551997
Alignment:
Q  99 tgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtgat 166  Q
    ||||||||||  ||| || |||||| | ||||||||  ||||||||||||| ||||||||||||||||    
T  36551930 tgcgacccttagaaccgtcgcaatccatcattttaagggtcgcaaaatgcattttttcttgtagtgat 36551997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 95 - 155
Target Start/End: Complemental strand, 12900819 - 12900759
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagttttt 155  Q
    |||||| |||||||||||||||   |||||  ||| ||||||||||||||||||| |||||    
T  12900819 catttgagacccttctaacagtcataatcagtcatattaaaagtcgcaaaatgcatttttt 12900759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 27442642 - 27442690
Alignment:
Q  118 gcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtgat 166  Q
    |||||| | ||||||||  ||||||||||||| ||||||||||||||||    
T  27442642 gcaatccatcattttaagggtcgcaaaatgcattttttcttgtagtgat 27442690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 14979441 - 14979360
Alignment:
Q  23 ttaaatttcaaattagacatttgcgacagttagcaaccgttgcaagtcccttgacatccatgtgaatctcttcatttgcgac 104  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  14979441 ttaaattttaaattagacatttgcgacagttagcaaccgttgcaagtcccttgaaatccatgtgaatctcctcatttgcgac 14979360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 18803488 - 18803556
Alignment:
Q  32 aaattagacatttgcgacagttagcaaccgttgcaagtcccttgacatccatgtgaatctcttcatttg 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18803488 aaattagacatttgcggcagttagcaaccgttgcaagtcccttgaaatccatgtgaatctcttcatttg 18803556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 166
Target Start/End: Complemental strand, 14979243 - 14979172
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtgat 166  Q
    ||||||||||||||||||||||  |||||| | |||||||||||||||||||||||||||||||||||||||    
T  14979243 catttgcgacccttctaacagtcacaatcagctattttaaaagtcgcaaaatgcagtttttcttgtagtgat 14979172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 13783292 - 13783223
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtg 164  Q
    |||||||||||||||||||||| ||||| | | |||||||||||||||||||||||||||||||||||||    
T  13783292 catttgcgacccttctaacagtcgcaattagcgattttaaaagtcgcaaaatgcagtttttcttgtagtg 13783223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 20463327 - 20463258
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtg 164  Q
    ||||||||||||||||||| || ||||||||| |||||||| ||||||||||||||||||||||||||||    
T  20463327 catttgcgacccttctaactgtcgcaatcaacaattttaaatgtcgcaaaatgcagtttttcttgtagtg 20463258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 39323545 - 39323476
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtg 164  Q
    |||||||||||||||||||||| ||||||| |  ||||||||||||||||||||||||||||||||||||    
T  39323545 catttgcgacccttctaacagtcgcaatcagcatttttaaaagtcgcaaaatgcagtttttcttgtagtg 39323476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 95 - 165
Target Start/End: Original strand, 15334686 - 15334756
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtga 165  Q
    |||||||||||||| |||| || ||||||| | |||||||| |||||||||||||||||||||||||||||    
T  15334686 catttgcgacccttgtaaccgtcgcaatcagcaattttaaatgtcgcaaaatgcagtttttcttgtagtga 15334756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 95 - 165
Target Start/End: Original strand, 15423749 - 15423819
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtga 165  Q
    |||||||||||||| |||| || ||||||| | |||||||| |||||||||||||||||||||||||||||    
T  15423749 catttgcgacccttgtaaccgtcgcaatcagcaattttaaatgtcgcaaaatgcagtttttcttgtagtga 15423819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 95 - 165
Target Start/End: Original strand, 15515055 - 15515125
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtga 165  Q
    |||||||||||||| |||| || ||||||| | |||||||| |||||||||||||||||||||||||||||    
T  15515055 catttgcgacccttgtaaccgtcgcaatcagcaattttaaatgtcgcaaaatgcagtttttcttgtagtga 15515125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 15423565 - 15423632
Alignment:
Q  39 acatttgcgacagttagcaaccgttgcaagtcccttg--acatccatgtgaatctcttcatttgcgac 104  Q
    ||||||||| ||||||||||||||||||||||| |||  | |||||||||||||||||||||||||||    
T  15423565 acatttgcggcagttagcaaccgttgcaagtccattgaaaaatccatgtgaatctcttcatttgcgac 15423632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 95 - 165
Target Start/End: Original strand, 18803677 - 18803748
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgc-aaaatgcagtttttcttgtagtga 165  Q
    |||||||||||||| |||| || ||||||| |||||||||| ||||| ||||||||||||||||||||||||    
T  18803677 catttgcgacccttttaaccgtcgcaatcagccattttaaatgtcgcaaaaatgcagtttttcttgtagtga 18803748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 15334502 - 15334569
Alignment:
Q  39 acatttgcgacagttagcaaccgttgcaagtcccttg--acatccatgtgaatctcttcatttgcgac 104  Q
    ||||||||| ||||||||||||||||||||||| |||  | |||||||||||||||||| ||||||||    
T  15334502 acatttgcggcagttagcaaccgttgcaagtccattgaaaaatccatgtgaatctcttcgtttgcgac 15334569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 15514871 - 15514938
Alignment:
Q  39 acatttgcgacagttagcaaccgttgcaagtcccttg--acatccatgtgaatctcttcatttgcgac 104  Q
    ||||||||| ||||||||||||||||||||||| |||  | |||||||||||||||||| ||||||||    
T  15514871 acatttgcggcagttagcaaccgttgcaagtccattgaaaaatccatgtgaatctcttcgtttgcgac 15514938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 3e-30; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 24 - 103
Target Start/End: Original strand, 4104773 - 4104852
Alignment:
Q  24 taaatttcaaattagacatttgcgacagttagcaaccgttgcaagtcccttgacatccatgtgaatctcttcatttgcga 103  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  4104773 taaattttaaattagacatttgcgacagttagcaaccgttgcaagtcccttgaaatccatgtgaatctcctcatttgcga 4104852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 95 - 163
Target Start/End: Original strand, 4104970 - 4105038
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagt 163  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  4104970 catttgcgacccttctaacagtcgcaatcagccattttaaaagtcgcaaaatgcagtttttcttgtagt 4105038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 3498297 - 3498228
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtg 164  Q
    ||||||||||| |||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||    
T  3498297 catttgcgaccattctaacagtcgcaatcagcgattttaaaagtcgcaaaatgcagtttttcttgtagtg 3498228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 35186107 - 35186171
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttg 159  Q
    |||||||||||||||||||||| ||||||| |  ||||||||||| |||||||||||||||||||    
T  35186107 catttgcgacccttctaacagtcgcaatcagcgtttttaaaagtcacaaaatgcagtttttcttg 35186171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 9265079 - 9265015
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttg 159  Q
    ||||||||||| |||||||||| |||||    ||||||||||||||| ||||||| |||||||||    
T  9265079 catttgcgacctttctaacagtcgcaattcgtcattttaaaagtcgccaaatgcattttttcttg 9265015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 2e-28; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 14964116 - 14964188
Alignment:
Q  32 aaattagacatttgcgacagttagcaaccgttgcaagtcccttgacatccatgtgaatctcttcatttgcgac 104  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14964116 aaattagacatttgcggcagttagcaaccgttgcaagtcccttgaaatccatgtgaatctcttcatttgcgac 14964188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 12353666 - 12353597
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtg 164  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  12353666 catttgcgacccttctaacagtcgcaatcagccattttaaaagtcgcaaaatgcagtttttcttgtagtg 12353597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 95 - 165
Target Start/End: Complemental strand, 2068324 - 2068254
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtga 165  Q
    |||||||||||||||||||||| ||||||| | |||||||| ||||||||||||| |||||||||||||||    
T  2068324 catttgcgacccttctaacagtcgcaatcagcaattttaaaggtcgcaaaatgcattttttcttgtagtga 2068254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 95 - 165
Target Start/End: Complemental strand, 22216004 - 22215934
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtga 165  Q
    |||||||||||||||||||||| ||||||| |  |||||||||||| ||||||||||||||||||||||||    
T  22216004 catttgcgacccttctaacagtcgcaatcagcgtttttaaaagtcgaaaaatgcagtttttcttgtagtga 22215934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 95 - 155
Target Start/End: Complemental strand, 9190468 - 9190408
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagttttt 155  Q
    |||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||    
T  9190468 catttgcgacccttctaacagtcgcaatcaacgtttttaaaagtcgcaaaatgcagttttt 9190408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 14288295 - 14288241
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgca 149  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  14288295 catttgcgacccttctaacagtcgcaatcaatcattttaaaagtcgcaaaatgca 14288241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 95 - 165
Target Start/End: Original strand, 14964305 - 14964375
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtga 165  Q
    |||||||||||||| |||| || ||||| | |||||||||| |||||||||||||||||||| ||||||||    
T  14964305 catttgcgacccttttaaccgtcgcaataagccattttaaatgtcgcaaaatgcagtttttcctgtagtga 14964375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 9881842 - 9881790
Alignment:
Q  111 aacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagt 163  Q
    |||||| ||||||| ||||||||||||||||||||||||  ||||||||||||    
T  9881842 aacagtcgcaatcagccattttaaaagtcgcaaaatgcaaattttcttgtagt 9881790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 8883338 - 8883385
Alignment:
Q  118 gcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtga 165  Q
    ||||||| |||||||||| |||||||||||||  ||||||||||||||    
T  8883338 gcaatcagccattttaaaggtcgcaaaatgcaaattttcttgtagtga 8883385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 33594659 - 33594618
Alignment:
Q  96 atttgcgacccttctaacagttgcaatcaaccattttaaaag 137  Q
    |||||||| |||||||||||| ||||||| ||||||||||||    
T  33594659 atttgcgatccttctaacagtcgcaatcagccattttaaaag 33594618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 165
Target Start/End: Complemental strand, 33594435 - 33594399
Alignment:
Q  129 ttttaaaagtcgcaaaatgcagtttttcttgtagtga 165  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  33594435 ttttaaaagtcgtaaaatgcagcttttcttgtagtga 33594399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 44717876 - 44717796
Alignment:
Q  24 taaatttcaaattagacatttgcgacagttagcaaccgttgcaagtcccttgacatccatgtgaatctcttcatttgcgac 104  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||    
T  44717876 taaattttaaattagacatttgcgacagttagcatccgttgcaagtcccttgaaatccatgtgaatctcgtcatttgcgac 44717796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 95 - 164
Target Start/End: Original strand, 9327035 - 9327104
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtg 164  Q
    |||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||    
T  9327035 catttgcgacccttctaacagtcgcaatcaacaattttaaaagttgcaaaatgcagtttttcttgtagtg 9327104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 44717679 - 44717610
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtg 164  Q
    ||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  44717679 catttgcgatccttctaacagtcgcaatcagccattttaaaagtcgcaaaatgcagtttttcttgtagtg 44717610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 21859323 - 21859254
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtg 164  Q
    ||||||||||||||||||| || | | ||| |||||||||| ||||||||||||||||||||||||||||    
T  21859323 catttgcgacccttctaaccgtcgtagtcagccattttaaatgtcgcaaaatgcagtttttcttgtagtg 21859254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 95 - 155
Target Start/End: Original strand, 22919096 - 22919156
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagttttt 155  Q
    |||||||||||||||||||||| ||||| |  |||||| ||||||  |||||||| |||||    
T  22919096 catttgcgacccttctaacagtcgcaatgagtcattttcaaagtcataaaatgcatttttt 22919156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 7e-28; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 95 - 166
Target Start/End: Original strand, 48631848 - 48631919
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtgat 166  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  48631848 catttgcgacccttctaacagtcgcaatcagccattttaaaagtcgcaaaatgcagtttttcttgtagtgat 48631919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 48631653 - 48631731
Alignment:
Q  26 aatttcaaattagacatttgcgacagttagcaaccgttgcaagtcccttgacatccatgtgaatctcttcatttgcgac 104  Q
    ||||| |||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  48631653 aattttaaattacacatttgcgacggttagcaaccgttgcaagtcccttgaaatccatgtgaatctcctcatttgcgac 48631731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 95 - 164
Target Start/End: Original strand, 1847388 - 1847457
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtg 164  Q
    |||||| ||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||    
T  1847388 catttgtgacccttctaacagtcgcaatcagccattttaaaagtcgtaaaatgcagtttttcttgtagtg 1847457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 95 - 165
Target Start/End: Complemental strand, 4486247 - 4486177
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtga 165  Q
    |||||||||||||||||||||| ||||||   ||||||||||||||||||||||| |||||||||||||||    
T  4486247 catttgcgacccttctaacagtcgcaatctgtcattttaaaagtcgcaaaatgcattttttcttgtagtga 4486177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 96 - 165
Target Start/End: Original strand, 20657143 - 20657212
Alignment:
Q  96 atttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtga 165  Q
    ||||||||||||||||||||| ||||||| | |||||||| |||||||||  || |||||||||||||||    
T  20657143 atttgcgacccttctaacagtcgcaatcagcaattttaaaggtcgcaaaacacattttttcttgtagtga 20657212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 1844370 - 1844302
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagt 163  Q
    ||||||||||||||||||| || || ||||  ||||||||| ||||||||||||| |||||||||||||    
T  1844370 catttgcgacccttctaaccgtcgccatcagtcattttaaatgtcgcaaaatgcattttttcttgtagt 1844302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 95 - 166
Target Start/End: Complemental strand, 18195935 - 18195862
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgca--gtttttcttgtagtgat 166  Q
    |||| ||| |||||||||||||| |||||| ||||||||||||| ||||||||||   ||||||||||||||||    
T  18195935 cattcgcggcccttctaacagttacaatcagccattttaaaagttgcaaaatgcattttttttcttgtagtgat 18195862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 95 - 166
Target Start/End: Original strand, 37079331 - 37079401
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtgat 166  Q
    ||||||||||| |||||| ||| |||||||  ||||||||||||||||||||||  |||||||| |||||||    
T  37079331 catttgcgaccattctaatagtcgcaatcagtcattttaaaagtcgcaaaatgc-ctttttcttatagtgat 37079401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 95 - 164
Target Start/End: Original strand, 10371021 - 10371090
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtg 164  Q
    |||||||||||||||||||||| | |||||| |||||||||  ||||||||| ||   ||||||||||||    
T  10371021 catttgcgacccttctaacagtcgtaatcaatcattttaaagatcgcaaaatacaaagtttcttgtagtg 10371090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 19388332 - 19388283
Alignment:
Q  99 tgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgc 148  Q
    |||||| ||||||||||| |||||| | |||||||||||||| |||||||    
T  19388332 tgcgacacttctaacagtcgcaatccatcattttaaaagtcgtaaaatgc 19388283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 5e-26; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 21300430 - 21300362
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagt 163  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  21300430 catttgcgacccttctaacagtcgcaatcagccattttaaaagtcgcaaaatgcagtttttcttgtagt 21300362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 95 - 165
Target Start/End: Original strand, 137973 - 138043
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtga 165  Q
    |||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||    
T  137973 catttgcgacccttctaacagtcgcaatcaacgtttttaaaagtcgcaaaatgcagtttttcttgtagtga 138043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 95 - 164
Target Start/End: Original strand, 25644531 - 25644600
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtg 164  Q
    ||||||||||||||| |||||| ||||||||| |||||||||||||||||||||| ||||||||||||||    
T  25644531 catttgcgacccttcgaacagtcgcaatcaacaattttaaaagtcgcaaaatgcaatttttcttgtagtg 25644600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 7201475 - 7201406
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtg 164  Q
    ||||||||||||||||||| || ||||||| |||||||||| |||||||||||||  |||||||||||||    
T  7201475 catttgcgacccttctaaccgtcgcaatcagccattttaaaggtcgcaaaatgcaaattttcttgtagtg 7201406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 102
Target Start/End: Complemental strand, 21300627 - 21300549
Alignment:
Q  24 taaatttcaaattagacatttgcgacagttagcaaccgttgcaagtcccttgacatccatgtgaatctcttcatttgcg 102  Q
    ||||||| ||||||||||||||||||||||   ||| ||||||||||||||||   ||||||||||||| |||||||||    
T  21300627 taaattttaaattagacatttgcgacagttgtgaactgttgcaagtcccttgaataccatgtgaatctcctcatttgcg 21300549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 22065561 - 22065492
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtg 164  Q
    |||||||||||||||||||||| |||| |    |||||||| ||||||||||||| ||||||||||||||    
T  22065561 catttgcgacccttctaacagtcgcaaactgttattttaaatgtcgcaaaatgcattttttcttgtagtg 22065492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 95 - 166
Target Start/End: Complemental strand, 19021674 - 19021604
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtgat 166  Q
    ||||||||||| |||||||||| ||||||   ||||||||| | ||||||||||| ||||||||||||||||    
T  19021674 catttgcgacc-ttctaacagtcgcaatctgtcattttaaatggcgcaaaatgcattttttcttgtagtgat 19021604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 15613367 - 15613432
Alignment:
Q  99 tgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtg 164  Q
    ||||||||||  |||||| |||||| | ||||||||  ||||||||||||| ||||||||||||||    
T  15613367 tgcgacccttagaacagtcgcaatccatcattttaagggtcgcaaaatgcattttttcttgtagtg 15613432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 4311 - 4389
Alignment:
Q  25 aaatttcaaattagacatttgcgacagttagcaaccgttgcaagtcccttgacatccatgtgaatctcttcatttgcgac 104  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||    
T  4311 aaattttaaattagaaatttgcgacagttagcaactgttgcaagtcccttga-atccatgtgaatctcctcatttgcgac 4389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 95 - 154
Target Start/End: Original strand, 4505 - 4564
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttt 154  Q
    ||||||||||||||| |||||| ||||||| | ||||||||||||| |||||| ||||||    
T  4505 catttgcgacccttcaaacagtcgcaatcagcgattttaaaagtcgtaaaatgtagtttt 4564  T

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Target: scaffold1175 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 95 - 165
Target Start/End: Original strand, 1882 - 1952
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtga 165  Q
    ||||||||||||||||||||||  |||||| ||||||||||| ||||||||||||||||||||||||||||    
T  1882 catttgcgacccttctaacagtcacaatcagccattttaaaattcgcaaaatgcagtttttcttgtagtga 1952  T

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Target: scaffold0019 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 95 - 162
Target Start/End: Complemental strand, 111510 - 111443
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtag 162  Q
    ||||||||||||||||||| || ||||||| | |||||||| ||||||||||||||||||||||||||    
T  111510 catttgcgacccttctaactgtcgcaatcagcaattttaaatgtcgcaaaatgcagtttttcttgtag 111443  T

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Target: chr2 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 95 - 166
Target Start/End: Original strand, 20424638 - 20424709
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtgat 166  Q
    ||||||||||| |||||||||| ||||||| ||||||||| ||| ||||||||||  |||||||||||||||    
T  20424638 catttgcgacctttctaacagtcgcaatcagccattttaatagttgcaaaatgcaaattttcttgtagtgat 20424709  T

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Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 166
Target Start/End: Complemental strand, 11293906 - 11293847
Alignment:
Q  107 ttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagtgat 166  Q
    |||||||||| |||||||   ||||||||||||||||||||||||||||||| |||||||    
T  11293906 ttctaacagtcgcaatcagtaattttaaaagtcgcaaaatgcagtttttcttatagtgat 11293847  T

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Target: scaffold0001 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 52982 - 52914
Alignment:
Q  95 catttgcgacccttctaacagttgcaatcaaccattttaaaagtcgcaaaatgcagtttttcttgtagt 163  Q
    |||||||||||||||||||||| |||||||  |||||||||||||  ||||| || |||||||||||||    
T  52982 catttgcgacccttctaacagtcgcaatcagtcattttaaaagtcagaaaatacattttttcttgtagt 52914  T

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Target: scaffold0186 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 166
Target Start/End: Original strand, 2793 - 2822
Alignment:
Q  137 gtcgcaaaatgcagtttttcttgtagtgat 166  Q
    ||||||||||||||||||||||||||||||    
T  2793 gtcgcaaaatgcagtttttcttgtagtgat 2822  T

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