View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5987_high_17 (Length: 308)
Name: NF5987_high_17
Description: NF5987
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5987_high_17 |
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Alignment Details
Target: chr3 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 1 - 292
Target Start/End: Original strand, 36072603 - 36072894
Alignment:
| Q |
1 |
tatatttggtttctccttattgtagtaaactgcaactatgttaatgttaatttttatattggaattaagtgaataaatttcctagaaatcaacaggcaag |
100 |
Q |
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| T |
36072603 |
tatatttggtttctccttattgtagtaaactgcaactatgttaatattaatttttatattggaattaagtgaataaatttcctagaaatcaacaggcaag |
36072702 |
T |
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| Q |
101 |
gcaaaattaaacaggtataatgtgtggaagatttttggaattttaccttgaagcacatgaatttgcgacataaagaacttgaattcaattgttcactcca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36072703 |
gcaaaattaaacaggtataatgtgtggaagatttttggaattttaccttgaagcacatgaatttgcgacataaagaacttgaattcaattgttcactcca |
36072802 |
T |
|
| Q |
201 |
tgttcaagatcaatctctttgccttatgtagacactttgctttacgatacatattacacttcaccttatgcagggacataggtagaaggggg |
292 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
36072803 |
tgttcaagatcaatctctttgccttatgtagacactttgctttacgatacatattacacttcaccttatgcggggacataggtagaaggggg |
36072894 |
T |
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