View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5987_low_21 (Length: 267)
Name: NF5987_low_21
Description: NF5987
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5987_low_21 |
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Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 26 - 251
Target Start/End: Original strand, 3416113 - 3416341
Alignment:
| Q |
26 |
gttgtagatgaacgattggtgatgaaattataataaaagtgatggctgatacatgggtgtaatctc---aaaaccaaagtgtatatgatgttggatggag |
122 |
Q |
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| T |
3416113 |
gttgtagatgaacgattggtgatgaaattataataaaagtgatggctgatacatgggtgtaatctcctcaaaaccaaagtgtatatgatgttggatggag |
3416212 |
T |
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| Q |
123 |
agagaatatgtgatactaataaaattcattatttgtttcttgatgagagattgtagaagtattctagatcgtgcctctttttgagtcagaaagagttgat |
222 |
Q |
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| T |
3416213 |
agagaatatgtgatactaataaaattcattatttgtttcttgatgagagattgtagaagtattctagatcgtgcctctttttgagtcagaaagagttgat |
3416312 |
T |
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| Q |
223 |
aagctaaattatgttgaagatcaaattga |
251 |
Q |
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| T |
3416313 |
aagctaaattatgttgaagatcaaattga |
3416341 |
T |
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