View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5989_high_22 (Length: 242)
Name: NF5989_high_22
Description: NF5989
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5989_high_22 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 750637 - 750881
Alignment:
| Q |
1 |
tacacgttaatgcatgtgattagatgaagaaagacactaataccgacatta---gcatgttcatgaagcacaaaacaaatatcaatgatacttaaaataa |
97 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
750637 |
tacacgttaatgcatgtgattagatgaagaaagacacttataccgacattattagcatgttcatgaagcacaaaacaaatatcaatgatacttaaaataa |
750736 |
T |
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| Q |
98 |
cattgatcctaatgactataattaagcaaacattttaaaacaataatgaacgaaagaatcacatgtatacagtaaaagttggataattaattaattaaga |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
750737 |
cattgatcctaatgactataattaagcaaacattttaaaacaataatgaacgaaagaatcacatgtatacagtaaaagttggataattgattaattaaga |
750836 |
T |
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| Q |
198 |
tttgaatagtacctgattagcaaaaccaacaccacaaccaagtaa |
242 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
750837 |
tttgaatagtacctgattagcaaaaccaacaccacaaccaagtaa |
750881 |
T |
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