View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5993_low_38 (Length: 262)
Name: NF5993_low_38
Description: NF5993
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5993_low_38 |
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Alignment Details
Target: chr7 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 43177886 - 43178109
Alignment:
| Q |
24 |
tagtacctaatgatcaacctcttcaaaagccactaatagttggttgagtacttgaattcgtgtatatattaatgatacaaatcattacagttacaactta |
123 |
Q |
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| T |
43177886 |
tagtacctaatgatcaacctcttcaaaagccactaatagttggttgagtacttgaattcgtgtatatattaatgatacaaatcattacagttacaactta |
43177985 |
T |
|
| Q |
124 |
catgtttaactaatcattatagtgcaacaaacataccaacaatgtgggtcagtctattcatcaccttaatttgtttttaagttgcaatttagtaannnnn |
223 |
Q |
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||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
43177986 |
catgtttaattaatcattatagtgtaacaaacataccaacaatgtgggtcagtctattcatcaccttaatttgtttttatgttgcaatttagtaattttt |
43178085 |
T |
|
| Q |
224 |
nnctgattatatatgtgaggtaag |
247 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
43178086 |
ttctgattatatatgtgaggtaag |
43178109 |
T |
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