View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5995_high_11 (Length: 276)
Name: NF5995_high_11
Description: NF5995
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5995_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 17 - 266
Target Start/End: Complemental strand, 47468482 - 47468233
Alignment:
| Q |
17 |
aaaacaaacattaagggttgagtggttacttcctacaactttctttgtgttatgtcacctttgtaatctgtttataattttcatcttgatgtaattgttg |
116 |
Q |
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| T |
47468482 |
aaaacaaacattaagggttgagtggttacttcctacaactttctttgtgttatgtcacctttgtaatctgtttataattttcatcttgatgtaattgttg |
47468383 |
T |
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| Q |
117 |
agacaattgaaaatgacaatagttccttgaaacaatggcttttacattgttagtggtcttagaaatggcaacaaaacacaccttctgtttcatctgatag |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
47468382 |
agacaattgaaaatgacaatagttccttgaaacaatggcttttacattgttagtggtcttagaaatggcaacaaaacacaccttctgtttcatgtgatag |
47468283 |
T |
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| Q |
217 |
tgcttaaacaaagaaagttgtttgatttctagagaagagatatacctttg |
266 |
Q |
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| T |
47468282 |
tgcttaaacaaagaaagttgtttgatttctagagaagagatatacctttg |
47468233 |
T |
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