View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5995_low_7 (Length: 362)
Name: NF5995_low_7
Description: NF5995
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5995_low_7 |
 |  |
|
| [»] scaffold1515 (1 HSPs) |
 |  |  |
|
| [»] scaffold0264 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr6 (Bit Score: 261; Significance: 1e-145; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 16 - 345
Target Start/End: Original strand, 21558614 - 21558943
Alignment:
| Q |
16 |
actaactatatgaaaagataaatgaatcttgtattggattgtaaaacgacatatactttaggtcaaannnnnnnccctaaaatgacatacaatttgggac |
115 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||| ||||||||||||||||| |
|
|
| T |
21558614 |
actaactatatgaaaagataaatgaatcttgtattggattgtaaaacgacatataatttaggttaaatttttttccctaaaacgacatacaatttgggac |
21558713 |
T |
 |
| Q |
116 |
ggaggaagtattatattactaagggatacatattacagacaacaatgtcgttaaaatccttgctagcagaaaacttagtgggataatacaaaaggaagnn |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21558714 |
ggaggaagtattatattactaagggatacatattacagacaacaatgtcgttaaaatccttgctagcagaaaacttagtgggataatacaaaaggaagaa |
21558813 |
T |
 |
| Q |
216 |
nnnnnngagcgcatcgtgttactattatgacgcacacataatattattattcactgaaagatcggggcgttttccaaaaccataaaaacaagtctgtcta |
315 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21558814 |
aaaaaagagcgcatcgtgttactattatgacgcgcacataatattattattcacttaaagatcggggcgttttccaaaaccataaaaacaagtctgtcta |
21558913 |
T |
 |
| Q |
316 |
atacaccacatctttagaggttcttttacc |
345 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |
|
|
| T |
21558914 |
atacaccacatctttagaggtttttttacc |
21558943 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 126
Target Start/End: Original strand, 15989838 - 15989871
Alignment:
| Q |
93 |
taaaatgacatacaatttgggacggaggaagtat |
126 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| |
|
|
| T |
15989838 |
taaaatgacatacaatttgggacggagggagtat |
15989871 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 21545417 - 21545497
Alignment:
| Q |
124 |
tattatattactaaggga-tacatattacagacaacaatgtcgttaaaatccttgctagc--agaaaacttagtgggataa |
201 |
Q |
| |
|
|||||||||| ||||||| ||||| ||||||||||||||||| ||||| |||| ||||| ||||||||| |||||||| |
|
|
| T |
21545417 |
tattatattattaagggaatacattttacagacaacaatgtcaataaaaaccttactagctaggaaaacttaatgggataa |
21545497 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 125
Target Start/End: Complemental strand, 32142408 - 32142375
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagta |
125 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
32142408 |
ctaaaatgacatacaatttgggacggagggagta |
32142375 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 690508 - 690552
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtattatattacta |
136 |
Q |
| |
|
||||||||||||||||||| ||| ||||| |||| |||||||||| |
|
|
| T |
690508 |
ctaaaatgacatacaatttaggatggagggagtactatattacta |
690552 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 2603644 - 2603684
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtattatatt |
132 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
2603644 |
ctaaagtgacatacaatttgggacggagggagtatcatatt |
2603684 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 6835745 - 6835709
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtatta |
128 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
6835745 |
ctaaagtgacatacaatttgggacggagggagtatta |
6835709 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 8201493 - 8201457
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtatta |
128 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
8201493 |
ctaaagtgacatacaatttgggacggagggagtatta |
8201457 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 34; Significance: 0.0000000005; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 8611846 - 8611809
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtattat |
129 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
8611846 |
ctaaagtgacatacaatttgggacggaggaagtattat |
8611809 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 28537009 - 28537053
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtattatattacta |
136 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| ||||| |||| |
|
|
| T |
28537009 |
ctaaaatgacatacaatttgggacggagggagtactatataacta |
28537053 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 40768725 - 40768760
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtatt |
127 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| |
|
|
| T |
40768725 |
ctaaagtgacatacaatttgggacggaggaagtatt |
40768760 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 126
Target Start/End: Original strand, 38510158 - 38510192
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtat |
126 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |
|
|
| T |
38510158 |
ctaaaatgacatacaatttgggacggagggagtat |
38510192 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 125
Target Start/End: Complemental strand, 5528417 - 5528384
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagta |
125 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| |
|
|
| T |
5528417 |
ctaaagtgacatacaatttgggacggaggaagta |
5528384 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 130
Target Start/End: Original strand, 37277944 - 37277973
Alignment:
| Q |
101 |
catacaatttgggacggaggaagtattata |
130 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
37277944 |
catacaatttgggacggaggaagtattata |
37277973 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 10453156 - 10453192
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtatta |
128 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
10453156 |
ctaaagtgacatacaatttgggacggagggagtatta |
10453192 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 34; Significance: 0.0000000005; HSPs: 13)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 125
Target Start/End: Complemental strand, 15019811 - 15019778
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagta |
125 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
15019811 |
ctaaaatgacatacaatttgggacggaggaagta |
15019778 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 42490074 - 42490037
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtattat |
129 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
42490074 |
ctaaagtgacatacaatttgggacggaggaagtattat |
42490037 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 45218750 - 45218715
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtatt |
127 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| |
|
|
| T |
45218750 |
ctaaaatgacatacaatttgggacggatgaagtatt |
45218715 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 46195876 - 46195911
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtatt |
127 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| |
|
|
| T |
46195876 |
ctaaagtgacatacaatttgggacggaggaagtatt |
46195911 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 126
Target Start/End: Original strand, 35084586 - 35084620
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtat |
126 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |
|
|
| T |
35084586 |
ctaaaatgacatacaatttgggacggagggagtat |
35084620 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 43175767 - 43175729
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtattata |
130 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||||| |
|
|
| T |
43175767 |
ctaaagtgacatacaatttgggacggagggagtattata |
43175729 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 38783690 - 38783727
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtattat |
129 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
38783690 |
ctaaagtgacatacaatttgggacggagggagtattat |
38783727 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 125
Target Start/End: Original strand, 29227420 - 29227452
Alignment:
| Q |
93 |
taaaatgacatacaatttgggacggaggaagta |
125 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| |
|
|
| T |
29227420 |
taaaatgacatacaatttgggacggagggagta |
29227452 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 125
Target Start/End: Complemental strand, 40643348 - 40643316
Alignment:
| Q |
93 |
taaaatgacatacaatttgggacggaggaagta |
125 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| |
|
|
| T |
40643348 |
taaaatgacatacaatttgggacggagggagta |
40643316 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 129
Target Start/End: Original strand, 42490556 - 42490584
Alignment:
| Q |
101 |
catacaatttgggacggaggaagtattat |
129 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
42490556 |
catacaatttgggacggaggaagtattat |
42490584 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 126
Target Start/End: Complemental strand, 43600902 - 43600866
Alignment:
| Q |
90 |
ccctaaaatgacatacaatttgggacggaggaagtat |
126 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||| |
|
|
| T |
43600902 |
ccctaaagcgacatacaatttgggacggaggaagtat |
43600866 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 45824134 - 45824170
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtatta |
128 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
45824134 |
ctaaagtgacatacaatttgggacggagggagtatta |
45824170 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 120
Target Start/End: Original strand, 48584133 - 48584161
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggagg |
120 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
48584133 |
ctaaaatgacatacaatttgggacggagg |
48584161 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 34; Significance: 0.0000000005; HSPs: 11)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 133
Target Start/End: Original strand, 29361492 - 29361533
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtattatatta |
133 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
29361492 |
ctaaaatgacatacaatttgggacggagggagtataatatta |
29361533 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 126
Target Start/End: Original strand, 14795168 - 14795203
Alignment:
| Q |
91 |
cctaaaatgacatacaatttgggacggaggaagtat |
126 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| |
|
|
| T |
14795168 |
cctaaaatgacatacaatttgggacggagggagtat |
14795203 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 126
Target Start/End: Complemental strand, 2994168 - 2994134
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtat |
126 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |
|
|
| T |
2994168 |
ctaaagtgacatacaatttgggacggaggaagtat |
2994134 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 126
Target Start/End: Original strand, 15575111 - 15575145
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtat |
126 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |
|
|
| T |
15575111 |
ctaaaatgacatacaatttgggacggagggagtat |
15575145 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 129
Target Start/End: Original strand, 26061909 - 26061947
Alignment:
| Q |
91 |
cctaaaatgacatacaatttgggacggaggaagtattat |
129 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
26061909 |
cctaaagtgacatacaatttgggacggagaaagtattat |
26061947 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 41529142 - 41529105
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtattat |
129 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
41529142 |
ctaaagtgacatacaatttgggacggagggagtattat |
41529105 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 127
Target Start/End: Complemental strand, 1395705 - 1395677
Alignment:
| Q |
99 |
gacatacaatttgggacggaggaagtatt |
127 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
1395705 |
gacatacaatttgggacggaggaagtatt |
1395677 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 120
Target Start/End: Original strand, 5653736 - 5653764
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggagg |
120 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
5653736 |
ctaaaatgacatacaatttgggacggagg |
5653764 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 16010949 - 16010913
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtatta |
128 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
16010949 |
ctaaagtgacatacaatttgggacggagggagtatta |
16010913 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 34022382 - 34022455
Alignment:
| Q |
53 |
attgtaaaacgacatatactttaggtcaaannnnnnnccctaaaatgacatacaatttgggacggaggaagtat |
126 |
Q |
| |
|
|||||||| ||||||||| |||||| |||| ||||||| |||||||||||||||||||||| ||||| |
|
|
| T |
34022382 |
attgtaaagcgacatataatttaggacaaaaaaatttccctaaagcgacatacaatttgggacggagggagtat |
34022455 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 125
Target Start/End: Complemental strand, 44789300 - 44789268
Alignment:
| Q |
93 |
taaaatgacatacaatttgggacggaggaagta |
125 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| |
|
|
| T |
44789300 |
taaaatgacatacaatttgggacggagggagta |
44789268 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 32; Significance: 0.000000008; HSPs: 11)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 131
Target Start/End: Complemental strand, 19002938 - 19002899
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtattatat |
131 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||||||| |
|
|
| T |
19002938 |
ctaaagtgacatacaatttgggacggagggagtattatat |
19002899 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 126
Target Start/End: Complemental strand, 5421466 - 5421432
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtat |
126 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |
|
|
| T |
5421466 |
ctaaaatgacatacaatttgggacggagggagtat |
5421432 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 131
Target Start/End: Complemental strand, 1204943 - 1204906
Alignment:
| Q |
94 |
aaaatgacatacaatttgggacggaggaagtattatat |
131 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| |||| |
|
|
| T |
1204943 |
aaaatgacatacaatttgggacggagggagtataatat |
1204906 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 125
Target Start/End: Original strand, 7491702 - 7491735
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagta |
125 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
7491702 |
ctaaaatgacatacaatttgggacggagggagta |
7491735 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 133
Target Start/End: Original strand, 28786972 - 28787013
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtattatatta |
133 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||| ||||||| |
|
|
| T |
28786972 |
ctaaagtgacatacaatttgggacggagggagtaatatatta |
28787013 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 125
Target Start/End: Complemental strand, 40171863 - 40171830
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagta |
125 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| |
|
|
| T |
40171863 |
ctaaagtgacatacaatttgggacggaggaagta |
40171830 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 5443909 - 5443948
Alignment:
| Q |
90 |
ccctaaaatgacatacaatttgggacggaggaagtattata |
130 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
5443909 |
ccctaaaacgacatacaatt-gggacggaggaagtattata |
5443948 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 120
Target Start/End: Original strand, 8341729 - 8341757
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggagg |
120 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
8341729 |
ctaaaatgacatacaatttgggacggagg |
8341757 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 28330776 - 28330740
Alignment:
| Q |
93 |
taaaatgacatacaatttgggacggaggaagtattat |
129 |
Q |
| |
|
|||||||| ||||||||||||||||||| |||||||| |
|
|
| T |
28330776 |
taaaatgatatacaatttgggacggagggagtattat |
28330740 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 39407809 - 39407773
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtatta |
128 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
39407809 |
ctaaagtgacatacaatttgggacggagggagtatta |
39407773 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 40833501 - 40833465
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtatta |
128 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
40833501 |
ctaaagtgacatacaatttgggacggagggagtatta |
40833465 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1515 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1515
Description:
Target: scaffold1515; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 126
Target Start/End: Complemental strand, 1478 - 1444
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtat |
126 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |
|
|
| T |
1478 |
ctaaagtgacatacaatttgggacggaggaagtat |
1444 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 31; Significance: 0.00000003; HSPs: 10)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 126
Target Start/End: Original strand, 25838721 - 25838755
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtat |
126 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |
|
|
| T |
25838721 |
ctaaaatgacatacaatttgggacggagggagtat |
25838755 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 125
Target Start/End: Complemental strand, 11714471 - 11714438
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagta |
125 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
11714471 |
ctaaaatgacatacaatttgggacggagggagta |
11714438 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 133
Target Start/End: Original strand, 16862005 - 16862038
Alignment:
| Q |
100 |
acatacaatttgggacggaggaagtattatatta |
133 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |
|
|
| T |
16862005 |
acatacaatttgggacggagggagtattatatta |
16862038 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 23597294 - 23597257
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtattat |
129 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
23597294 |
ctaaagtgacatacaatttgggacggagggagtattat |
23597257 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 23606216 - 23606179
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtattat |
129 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
23606216 |
ctaaagtgacatacaatttgggacggagggagtattat |
23606179 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 31602924 - 31602998
Alignment:
| Q |
53 |
attgtaaaacgacatatactttaggtcaaannnnnnnccctaaaatgacatacaatttgggacggaggaagtatt |
127 |
Q |
| |
|
|||||||||||||||||| ||| || |||| ||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
31602924 |
attgtaaaacgacatataatttgggacaaatttttttccctaaagcgacatacaatttgggacggagggagtatt |
31602998 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 126
Target Start/End: Complemental strand, 8378117 - 8378085
Alignment:
| Q |
94 |
aaaatgacatacaatttgggacggaggaagtat |
126 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| |
|
|
| T |
8378117 |
aaaatgtcatacaatttgggacggaggaagtat |
8378085 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 22578238 - 22578202
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtatta |
128 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
22578238 |
ctaaagtgacatacaatttgggacggagggagtatta |
22578202 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 26805071 - 26805107
Alignment:
| Q |
90 |
ccctaaaatgacatacaatttgggacggaggaagtat |
126 |
Q |
| |
|
|||||||| |||||||||||||||||||||| ||||| |
|
|
| T |
26805071 |
ccctaaaacgacatacaatttgggacggagggagtat |
26805107 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 130
Target Start/End: Complemental strand, 45186940 - 45186904
Alignment:
| Q |
94 |
aaaatgacatacaatttgggacggaggaagtattata |
130 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
45186940 |
aaaacgacatacaatttgggacggagggagtattata |
45186904 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 31; Significance: 0.00000003; HSPs: 8)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 133
Target Start/End: Original strand, 440100 - 440134
Alignment:
| Q |
99 |
gacatacaatttgggacggaggaagtattatatta |
133 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| |
|
|
| T |
440100 |
gacatacaatttgggacggaggaagtataatatta |
440134 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 8883231 - 8883194
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtattat |
129 |
Q |
| |
|
||||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
8883231 |
ctaaagtgagatacaatttgggacggaggaagtattat |
8883194 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 125
Target Start/End: Complemental strand, 10370580 - 10370547
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagta |
125 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
10370580 |
ctaaaatgacatacaatttgggacggagggagta |
10370547 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 125
Target Start/End: Complemental strand, 35189210 - 35189177
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagta |
125 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
35189210 |
ctaaaatgacatacaatttgggacggagggagta |
35189177 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 3633954 - 3633918
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtatta |
128 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
3633954 |
ctaaagtgacatacaatttgggacggagggagtatta |
3633918 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 35288146 - 35288110
Alignment:
| Q |
93 |
taaaatgacatacaatttgggacggaggaagtattat |
129 |
Q |
| |
|
||||| |||||||||||||||||||||| |||||||| |
|
|
| T |
35288146 |
taaaacgacatacaatttgggacggagggagtattat |
35288110 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 128
Target Start/End: Original strand, 35809484 - 35809512
Alignment:
| Q |
100 |
acatacaatttgggacggaggaagtatta |
128 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
35809484 |
acatacaatttgggacggaggaagtatta |
35809512 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 35869962 - 35869926
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtatta |
128 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
35869962 |
ctaaagtgacatacaatttgggacggagggagtatta |
35869926 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 31; Significance: 0.00000003; HSPs: 12)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 45250103 - 45250065
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtattata |
130 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
45250103 |
ctaaaatgacatacaatttgggacggagggagtagtata |
45250065 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 30088846 - 30088883
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtattat |
129 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
30088846 |
ctaaagtgacatacaatttgggacggagggagtattat |
30088883 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 125
Target Start/End: Original strand, 34491931 - 34491964
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagta |
125 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| |
|
|
| T |
34491931 |
ctaaagtgacatacaatttgggacggaggaagta |
34491964 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 128
Target Start/End: Original strand, 42133815 - 42133844
Alignment:
| Q |
99 |
gacatacaatttgggacggaggaagtatta |
128 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
42133815 |
gacatacaatttgggacggaggaagtatta |
42133844 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 48380606 - 48380569
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtattat |
129 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
48380606 |
ctaaagtgacatacaatttgggacggagggagtattat |
48380569 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 126
Target Start/End: Complemental strand, 388071 - 388043
Alignment:
| Q |
98 |
tgacatacaatttgggacggaggaagtat |
126 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
388071 |
tgacatacaatttgggacggaggaagtat |
388043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 23621671 - 23621635
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtatta |
128 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
23621671 |
ctaaagtgacatacaatttgggacggagggagtatta |
23621635 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 129
Target Start/End: Complemental strand, 37730775 - 37730747
Alignment:
| Q |
101 |
catacaatttgggacggaggaagtattat |
129 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
37730775 |
catacaatttgggacggaggaagtattat |
37730747 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 43566029 - 43565993
Alignment:
| Q |
91 |
cctaaaatgacatacaatttgggacggaggaagtatt |
127 |
Q |
| |
|
|||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
43566029 |
cctaaaatgacatacaatttaggacggagggagtatt |
43565993 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 127
Target Start/End: Original strand, 48510891 - 48510919
Alignment:
| Q |
99 |
gacatacaatttgggacggaggaagtatt |
127 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
48510891 |
gacatacaatttgggacggaggaagtatt |
48510919 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 55968574 - 55968538
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtatta |
128 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
55968574 |
ctaaagtgacatacaatttgggacggagggagtatta |
55968538 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 55984362 - 55984398
Alignment:
| Q |
92 |
ctaaaatgacatacaatttgggacggaggaagtatta |
128 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
55984362 |
ctaaagtgacatacaatttgggacggagggagtatta |
55984398 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0264 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0264
Description:
Target: scaffold0264; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 18926 - 18962
Alignment:
| Q |
90 |
ccctaaaatgacatacaatttgggacggaggaagtat |
126 |
Q |
| |
|
||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
18926 |
ccctaaagtgacatacaatttgggacggagggagtat |
18962 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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