View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5998_high_4 (Length: 315)
Name: NF5998_high_4
Description: NF5998
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5998_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 14 - 215
Target Start/End: Original strand, 48250707 - 48250909
Alignment:
| Q |
14 |
agcaaagggtggtttctctattttcctcaaacaaacaaaaacattgaatcttaattcttaacataggaaaa-aaggataacagtgaagaaaagtgagaga |
112 |
Q |
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| T |
48250707 |
agcaaagggtggtttctctattttcctcaaacaaacaaaaacattgaatcttaattcttaacataggaaaaaaaggataacagtgaagaaaagtgagaga |
48250806 |
T |
|
| Q |
113 |
caatggcggttgcagcaagtgcaggcacagtgttagttcctcatcggctattgacaaccaccaacgttactcgctgctctgctttgccttatcttcctcc |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48250807 |
caatggcggttgcagcaagtgcaggcacagtgttagttcctcatcggctattgacaaccaccaacgttactcgctgctctgctttgccttatcttcctcc |
48250906 |
T |
|
| Q |
213 |
tcg |
215 |
Q |
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||| |
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| T |
48250907 |
tcg |
48250909 |
T |
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