View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5999_high_57 (Length: 247)
Name: NF5999_high_57
Description: NF5999
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5999_high_57 |
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Alignment Details
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 34655004 - 34654776
Alignment:
| Q |
1 |
tcaagtcaacattcatgtactttgattttgacaaggttatctctgctgtcccagctgaagataagcagcaattaactgatgtggcaaacaaattgtttga |
100 |
Q |
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| T |
34655004 |
tcaagtcaacattcatgtactttgattttgacaaggttatctctgctgtcccagttgaagataagcaacaattaactgatgtggcaaacaaattgtttga |
34654905 |
T |
|
| Q |
101 |
taattttgaaaaggtatgctcctttttatattgcggttacatagagtcgcattttagtgcttgatattgcaggaaaaagtggtcgatgcaactgtagtcc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |
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| T |
34654904 |
taattttgaaaaggtatgctcctttttatattgcggttacatagagtcgcattttagtgcttgatattgcaggaaaaagtggtcgatgccactgtaatcc |
34654805 |
T |
|
| Q |
201 |
aaaatattgcagacaaatgttgctgatgc |
229 |
Q |
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|||||||||||||||||||| |||||||| |
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| T |
34654804 |
aaaatattgcagacaaatgtggctgatgc |
34654776 |
T |
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