View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5999_high_71 (Length: 223)
Name: NF5999_high_71
Description: NF5999
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5999_high_71 |
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Alignment Details
Target: chr8 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 35413379 - 35413183
Alignment:
| Q |
9 |
acatcatcaccatcataagcatcaacaaatatcatatcatagagattggtattattagtaataaattcctcagcatctgcttcgtgaaggcaaatcctct |
108 |
Q |
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| T |
35413379 |
acatcatcaccatcataagcatcaacaaatatcatatcatagagattggtattattagtaataaattcctcagcatctgcttcgtgaaggcaaatcctct |
35413280 |
T |
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| Q |
109 |
catgggtgcctttccacataacttcattaatgatatcaggttttgcaacctccctgtgacctgattttgtcatgagtgaaaaagccgggaaccccat |
205 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35413279 |
catgggtgcctttccacataacttcattaatgatatcaggttttgcaacctccctgtgacctgattttgtcatgagtgaaaaagccgggaaccccat |
35413183 |
T |
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