View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5999_low_36 (Length: 314)
Name: NF5999_low_36
Description: NF5999
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5999_low_36 |
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Alignment Details
Target: chr4 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 22325042 - 22325338
Alignment:
| Q |
1 |
attacatcatatttctttgcagcttctaataactcttgactataattcagaagatcctcgtctctcacgatatcgtagaagtaatctataaatatttgac |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22325042 |
attacatcatatttctttgcagcttctaataactcttgactataattcagaagatcctcgtctctcacgatatcgtagaagtaatctataaatatttgac |
22325141 |
T |
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| Q |
101 |
atggtatagttgtcatatctgagatgataatactatcagcagaatcctccttgaacatttggttaaaaacacttgactttgaaccaagagcaaacttatg |
200 |
Q |
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|||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |
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| T |
22325142 |
atggtatagttgtcatatctgagatggtaatactatcaacagaatcctccttgaacatttggttaaaagcacttgactttgaaccaagagcatacttatg |
22325241 |
T |
|
| Q |
201 |
ggccataatagtttgtttagatgcatcaatatagattgttgtgtctttatctcctcgaatcaatggaccatcggatgaaaatttatatcgcttaaat |
297 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |
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| T |
22325242 |
ggccataatagtttgtttagatgcatcaatatagatttttgtgtctttatctcctcgaatcaatggatcatcggatgataatttatatcgcttaaat |
22325338 |
T |
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