View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5999_low_44 (Length: 293)
Name: NF5999_low_44
Description: NF5999
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5999_low_44 |
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Alignment Details
Target: chr6 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 10 - 276
Target Start/End: Original strand, 9336187 - 9336453
Alignment:
| Q |
10 |
attattctaggagcactaacataagattttgagttaaaactcaacactcatataaaccttcagttcttgcatgaattgcatccgcaagaatttgtgaatc |
109 |
Q |
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| T |
9336187 |
attattctaggagcactaacataagattttgagttaaaactcaacactcatataaaccttcagttcttgcatgaattgcatccgcaagaatttgtgaatc |
9336286 |
T |
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| Q |
110 |
tcttagaaacaacacacttgatactcccattgcctgaattaagttcatgaaagttagcaatgcaatgacttatccctcatgcaattgcatcttcggttgt |
209 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9336287 |
tcttagaaacggcacacttgatactcccattgcctgaattaagttcatgaaagttagcaatgcaatgacttatccctcatgcaattgcatcttcggttgt |
9336386 |
T |
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| Q |
210 |
attcaaccagtccaagccttcataaactcgccttccttactacgaattagcctgcataacccgttct |
276 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9336387 |
attccaccagtccaagccttcataaactcgccttccttactacgaattagcctgcataacccgttct |
9336453 |
T |
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