View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5999_low_69 (Length: 231)

Name: NF5999_low_69
Description: NF5999
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5999_low_69
NF5999_low_69
[»] chr2 (52 HSPs)
chr2 (122-227)||(32519428-32519538)
chr2 (117-231)||(20911126-20911245)
chr2 (117-227)||(1150210-1150325)
chr2 (117-227)||(16366959-16367074)
chr2 (122-227)||(22731805-22731915)
chr2 (122-227)||(1149938-1150048)
chr2 (122-226)||(32519156-32519265)
chr2 (122-216)||(10446833-10446932)
chr2 (130-227)||(16367236-16367338)
chr2 (122-180)||(45663702-45663760)
chr2 (124-227)||(19606920-19607028)
chr2 (122-231)||(20911399-20911512)
chr2 (117-230)||(22309427-22309545)
chr2 (122-180)||(41846586-41846644)
chr2 (122-171)||(43681857-43681906)
chr2 (121-180)||(32519287-32519346)
chr2 (122-227)||(45663781-45663891)
chr2 (122-172)||(5608788-5608838)
chr2 (122-180)||(9694067-9694125)
chr2 (122-180)||(22309756-22309814)
chr2 (122-223)||(41846393-41846499)
chr2 (124-227)||(8089455-8089563)
chr2 (121-180)||(1150069-1150128)
chr2 (121-180)||(16367156-16367215)
chr2 (117-168)||(17580662-17580713)
chr2 (122-227)||(4375824-4375934)
chr2 (122-180)||(17284744-17284802)
chr2 (122-180)||(17366758-17366816)
chr2 (122-180)||(22731726-22731784)
chr2 (122-180)||(28599752-28599810)
chr2 (122-180)||(43682051-43682109)
chr2 (124-180)||(4375681-4375737)
chr2 (124-180)||(18477201-18477257)
chr2 (121-180)||(8089584-8089643)
chr2 (124-218)||(9959107-9959206)
chr2 (121-180)||(20911262-20911321)
chr2 (124-227)||(8089726-8089831)
chr2 (122-180)||(17284867-17284925)
chr2 (135-180)||(9693949-9693994)
chr2 (124-224)||(18476910-18477015)
chr2 (122-178)||(17366627-17366683)
chr2 (124-180)||(17580460-17580516)
chr2 (124-180)||(28599430-28599486)
chr2 (122-178)||(28599561-28599617)
chr2 (135-178)||(37984861-37984904)
chr2 (122-168)||(9959019-9959065)
chr2 (122-180)||(22309625-22309683)
chr2 (122-171)||(9958827-9958875)
chr2 (122-171)||(17285069-17285118)
chr2 (126-171)||(37985061-37985106)
chr2 (122-162)||(19603739-19603779)
chr2 (122-169)||(43682189-43682237)
[»] chr8 (72 HSPs)
chr8 (7-106)||(8933042-8933139)
chr8 (117-227)||(41182169-41182284)
chr8 (123-231)||(41801818-41801931)
chr8 (122-227)||(36623353-36623463)
chr8 (122-225)||(11478146-11478254)
chr8 (113-231)||(7662-7785)
chr8 (122-227)||(25287793-25287903)
chr8 (122-227)||(40525508-40525618)
chr8 (122-227)||(43866984-43867094)
chr8 (124-227)||(27857015-27857123)
chr8 (122-227)||(23424785-23424895)
chr8 (122-226)||(26739991-26740101)
chr8 (122-227)||(36623626-36623736)
chr8 (122-227)||(37342783-37342893)
chr8 (122-227)||(40422161-40422271)
chr8 (122-227)||(43866712-43866822)
chr8 (123-227)||(37343055-37343164)
chr8 (124-227)||(20096023-20096131)
chr8 (124-231)||(35163500-35163612)
chr8 (124-231)||(41251395-41251507)
chr8 (121-180)||(41182028-41182087)
chr8 (122-231)||(41251124-41251238)
chr8 (124-180)||(7396-7452)
chr8 (122-227)||(547432-547541)
chr8 (122-227)||(547708-547818)
chr8 (122-180)||(24529981-24530039)
chr8 (122-180)||(40422485-40422543)
chr8 (122-227)||(40525780-40525890)
chr8 (119-180)||(22763593-22763654)
chr8 (123-180)||(25287924-25287981)
chr8 (123-230)||(31690166-31690277)
chr8 (117-180)||(9632628-9632691)
chr8 (121-180)||(11478277-11478336)
chr8 (122-224)||(23424513-23424620)
chr8 (121-180)||(23424644-23424703)
chr8 (121-180)||(29190352-29190411)
chr8 (121-180)||(37342975-37343034)
chr8 (121-180)||(40525639-40525698)
chr8 (121-180)||(41251255-41251314)
chr8 (121-180)||(43866843-43866902)
chr8 (122-180)||(9632329-9632387)
chr8 (122-227)||(29190161-29190271)
chr8 (122-180)||(37713828-37713886)
chr8 (122-180)||(40422355-40422412)
chr8 (123-180)||(15716201-15716258)
chr8 (123-180)||(31690027-31690084)
chr8 (132-180)||(20096349-20096397)
chr8 (124-231)||(22763865-22763977)
chr8 (124-223)||(29190436-29190540)
chr8 (124-180)||(37713699-37713755)
chr8 (123-179)||(41802011-41802067)
chr8 (121-180)||(7586-7645)
chr8 (121-180)||(547628-547687)
chr8 (121-180)||(20096152-20096211)
chr8 (121-180)||(36623546-36623605)
chr8 (122-168)||(13566702-13566748)
chr8 (122-180)||(22763727-22763785)
chr8 (122-180)||(27436564-27436622)
chr8 (121-171)||(27856883-27856933)
chr8 (122-180)||(35163696-35163754)
chr8 (122-180)||(38600275-38600333)
chr8 (122-171)||(24529817-24529866)
chr8 (132-224)||(38619809-38619906)
chr8 (124-180)||(15716072-15716128)
chr8 (121-180)||(26739849-26739907)
chr8 (124-171)||(40933180-40933227)
chr8 (122-180)||(27437560-27437618)
chr8 (122-180)||(31689896-31689954)
chr8 (124-178)||(40933309-40933363)
chr8 (182-227)||(11478418-11478463)
chr8 (182-227)||(27856808-27856853)
chr8 (122-170)||(23514022-23514070)
[»] chr3 (50 HSPs)
chr3 (117-231)||(10998142-10998261)
chr3 (122-227)||(1741388-1741498)
chr3 (124-227)||(55036942-55037050)
chr3 (117-227)||(11312731-11312846)
chr3 (124-227)||(55036672-55036780)
chr3 (122-231)||(10749665-10749779)
chr3 (124-225)||(21300408-21300514)
chr3 (122-223)||(51279232-51279338)
chr3 (123-227)||(53037300-53037409)
chr3 (117-224)||(40257149-40257261)
chr3 (122-227)||(10749319-10749429)
chr3 (122-227)||(33458191-33458301)
chr3 (124-180)||(40257006-40257062)
chr3 (121-180)||(55036801-55036860)
chr3 (122-180)||(24576422-24576480)
chr3 (122-227)||(30804121-30804231)
chr3 (126-227)||(40256879-40256985)
chr3 (127-180)||(21255730-21255783)
chr3 (115-171)||(30654813-30654869)
chr3 (121-180)||(11312928-11312987)
chr3 (121-180)||(21300326-21300385)
chr3 (121-180)||(22129138-22129197)
chr3 (124-171)||(24576291-24576338)
chr3 (121-180)||(53037159-53037218)
chr3 (122-180)||(30803978-30804036)
chr3 (122-180)||(33989146-33989203)
chr3 (122-180)||(53037028-53037086)
chr3 (135-180)||(30890339-30890384)
chr3 (120-180)||(10997876-10997936)
chr3 (121-180)||(10749450-10749509)
chr3 (124-171)||(33458057-33458104)
chr3 (133-231)||(35432619-35432722)
chr3 (189-227)||(11313008-11313046)
chr3 (122-180)||(30654485-30654543)
chr3 (122-176)||(35432407-35432461)
chr3 (193-231)||(51279499-51279537)
chr3 (122-171)||(21255865-21255914)
chr3 (123-180)||(30803848-30803905)
chr3 (122-167)||(46670249-46670294)
chr3 (122-170)||(35432493-35432541)
chr3 (121-180)||(10998006-10998064)
chr3 (122-173)||(38642988-38643039)
chr3 (121-180)||(51279424-51279482)
chr3 (122-180)||(38642632-38642690)
chr3 (182-227)||(10749592-10749637)
chr3 (123-180)||(33989344-33989401)
chr3 (122-178)||(49650-49706)
chr3 (122-170)||(28310683-28310731)
chr3 (124-180)||(30890532-30890588)
chr3 (124-180)||(46670452-46670507)
[»] chr5 (57 HSPs)
chr5 (122-227)||(25253359-25253469)
chr5 (122-227)||(25317150-25317260)
chr5 (122-227)||(32052497-32052607)
chr5 (117-227)||(33735586-33735701)
chr5 (122-227)||(13064682-13064792)
chr5 (122-227)||(14745449-14745559)
chr5 (122-231)||(37945263-37945376)
chr5 (124-227)||(6421895-6422003)
chr5 (122-224)||(12991064-12991171)
chr5 (122-227)||(25253087-25253197)
chr5 (122-227)||(25316877-25316987)
chr5 (124-227)||(6421625-6421733)
chr5 (122-224)||(32052225-32052332)
chr5 (122-227)||(37944995-37945105)
chr5 (123-180)||(21260997-21261054)
chr5 (122-180)||(18934714-18934772)
chr5 (103-180)||(21260846-21260924)
chr5 (122-180)||(27753673-27753731)
chr5 (122-218)||(7015791-7015892)
chr5 (122-226)||(33735314-33735423)
chr5 (123-180)||(41339549-41339606)
chr5 (128-227)||(14745586-14745690)
chr5 (121-180)||(18013744-18013803)
chr5 (121-180)||(33735506-33735565)
chr5 (122-227)||(7015509-7015619)
chr5 (122-180)||(22533584-22533642)
chr5 (122-171)||(16118145-16118194)
chr5 (131-226)||(18013886-18013985)
chr5 (125-180)||(6421819-6421874)
chr5 (121-180)||(12990920-12990979)
chr5 (121-180)||(13064541-13064600)
chr5 (122-180)||(22024064-22024122)
chr5 (122-180)||(22533391-22533449)
chr5 (122-180)||(25253218-25253276)
chr5 (122-180)||(34404485-34404543)
chr5 (122-171)||(22024204-22024253)
chr5 (124-180)||(16117964-16118020)
chr5 (123-227)||(20704986-20705096)
chr5 (133-180)||(12628347-12628394)
chr5 (122-224)||(27753480-27753586)
chr5 (117-180)||(31118951-31119014)
chr5 (121-180)||(32052417-32052476)
chr5 (122-169)||(34404627-34404674)
chr5 (123-180)||(8323188-8323245)
chr5 (122-171)||(9915432-9915481)
chr5 (122-171)||(16118285-16118334)
chr5 (135-180)||(22533715-22533760)
chr5 (124-180)||(41339357-41339413)
chr5 (122-169)||(7015703-7015750)
chr5 (122-169)||(18934856-18934903)
chr5 (122-180)||(25317008-25317067)
chr5 (121-180)||(37945126-37945185)
chr5 (122-180)||(8323381-8323439)
chr5 (124-180)||(8323059-8323115)
chr5 (123-171)||(12628263-12628311)
chr5 (182-226)||(18013678-18013722)
chr5 (123-171)||(41339687-41339735)
[»] chr1 (78 HSPs)
chr1 (122-231)||(2953465-2953579)
chr1 (122-227)||(2953737-2953847)
chr1 (122-227)||(12577285-12577395)
chr1 (124-227)||(49002879-49002987)
chr1 (122-231)||(6056647-6056762)
chr1 (122-224)||(29043031-29043138)
chr1 (122-227)||(1040299-1040409)
chr1 (122-227)||(1047205-1047315)
chr1 (122-227)||(33347417-33347527)
chr1 (122-227)||(46849931-46850041)
chr1 (124-231)||(46849661-46849773)
chr1 (117-223)||(37152815-37152926)
chr1 (122-228)||(46364575-46364686)
chr1 (122-227)||(1047477-1047587)
chr1 (126-227)||(5926524-5926630)
chr1 (122-227)||(19755678-19755788)
chr1 (122-227)||(26953102-26953212)
chr1 (120-180)||(25415169-25415229)
chr1 (122-227)||(5183507-5183617)
chr1 (122-227)||(5183779-5183889)
chr1 (122-227)||(6056377-6056487)
chr1 (122-227)||(25414845-25414955)
chr1 (122-227)||(33347689-33347799)
chr1 (127-224)||(37152544-37152646)
chr1 (122-227)||(49003148-49003258)
chr1 (122-224)||(739494-739601)
chr1 (122-180)||(10019567-10019625)
chr1 (122-223)||(12577011-12577117)
chr1 (122-180)||(30830325-30830383)
chr1 (119-227)||(26953374-26953487)
chr1 (124-227)||(29980642-29980750)
chr1 (124-180)||(34176119-34176175)
chr1 (121-180)||(6056508-6056567)
chr1 (121-180)||(33347609-33347668)
chr1 (121-180)||(46364768-46364827)
chr1 (122-227)||(739220-739330)
chr1 (122-227)||(5926794-5926904)
chr1 (122-180)||(24701464-24701522)
chr1 (122-180)||(24701594-24701652)
chr1 (122-227)||(29980911-29981021)
chr1 (122-180)||(33030335-33030393)
chr1 (122-227)||(48380956-48381066)
chr1 (116-181)||(8890533-8890598)
chr1 (122-226)||(33030609-33030717)
chr1 (132-224)||(46364851-46364948)
chr1 (121-180)||(739351-739409)
chr1 (121-180)||(2953657-2953716)
chr1 (121-180)||(12577205-12577264)
chr1 (121-180)||(19755598-19755657)
chr1 (121-180)||(29980831-29980890)
chr1 (121-180)||(46849851-46849910)
chr1 (126-180)||(5926719-5926773)
chr1 (122-180)||(24701271-24701329)
chr1 (122-180)||(37152732-37152790)
chr1 (123-180)||(33030466-33030523)
chr1 (123-180)||(49003070-49003127)
chr1 (124-180)||(26953297-26953353)
chr1 (121-180)||(5183699-5183758)
chr1 (121-180)||(25415037-25415096)
chr1 (121-180)||(29042887-29042946)
chr1 (122-227)||(8890213-8890322)
chr1 (122-180)||(48380682-48380740)
chr1 (122-227)||(49990069-49990179)
chr1 (115-231)||(29042750-29042870)
chr1 (122-171)||(46544925-46544974)
chr1 (182-227)||(49989861-49989906)
chr1 (122-171)||(51933968-51934017)
chr1 (124-180)||(35311977-35312033)
chr1 (184-231)||(51933837-51933884)
chr1 (122-169)||(52454949-52454996)
chr1 (122-172)||(6334657-6334707)
chr1 (122-180)||(8890403-8890461)
chr1 (122-171)||(30830462-30830512)
chr1 (130-172)||(51934099-51934141)
chr1 (135-180)||(1040430-1040475)
chr1 (135-180)||(1047336-1047381)
chr1 (122-171)||(46544761-46544810)
chr1 (124-168)||(35312172-35312216)
[»] chr4 (57 HSPs)
chr4 (107-224)||(54961707-54961830)
chr4 (117-227)||(22249729-22249844)
chr4 (117-227)||(53559660-53559775)
chr4 (115-227)||(12691678-12691795)
chr4 (122-227)||(13872070-13872180)
chr4 (122-223)||(47862153-47862259)
chr4 (116-231)||(54961426-54961546)
chr4 (122-223)||(20086438-20086544)
chr4 (128-227)||(19916663-19916767)
chr4 (122-227)||(13872342-13872452)
chr4 (120-218)||(37678130-37678233)
chr4 (122-227)||(8287206-8287316)
chr4 (122-227)||(12691407-12691517)
chr4 (122-223)||(22250010-22250116)
chr4 (122-227)||(33294416-33294526)
chr4 (122-180)||(35730663-35730721)
chr4 (122-231)||(37677849-37677963)
chr4 (122-180)||(37678042-37678100)
chr4 (122-227)||(47981909-47982019)
chr4 (123-180)||(48507546-48507603)
chr4 (121-180)||(12691538-12691597)
chr4 (121-180)||(33294276-33294335)
chr4 (125-231)||(34238474-34238585)
chr4 (121-180)||(47862284-47862343)
chr4 (122-180)||(8286933-8286991)
chr4 (122-180)||(8287064-8287122)
chr4 (122-180)||(19740861-19740919)
chr4 (123-224)||(47980687-47980793)
chr4 (122-179)||(27813181-27813238)
chr4 (132-180)||(35730986-35731034)
chr4 (121-180)||(20086630-20086689)
chr4 (121-180)||(22249926-22249985)
chr4 (121-180)||(26601269-26601328)
chr4 (117-180)||(32846358-32846421)
chr4 (121-180)||(53559519-53559578)
chr4 (122-231)||(33294145-33294259)
chr4 (122-227)||(47862425-47862534)
chr4 (123-168)||(27813051-27813096)
chr4 (123-172)||(37732299-37732348)
chr4 (115-180)||(48507742-48507807)
chr4 (122-171)||(50246051-50246100)
chr4 (121-180)||(34238602-34238661)
chr4 (121-180)||(47980817-47980876)
chr4 (122-180)||(20601079-20601137)
chr4 (122-180)||(35730855-35730913)
chr4 (122-180)||(37732404-37732462)
chr4 (122-180)||(50246183-50246241)
chr4 (122-167)||(489377-489422)
chr4 (122-167)||(515169-515214)
chr4 (122-171)||(19916990-19917039)
chr4 (182-227)||(53559453-53559498)
chr4 (124-168)||(13872265-13872309)
chr4 (122-178)||(19916850-19916906)
chr4 (132-172)||(20600958-20600998)
chr4 (124-223)||(50245860-50245964)
chr4 (122-178)||(13336881-13336937)
chr4 (132-180)||(45199138-45199186)
[»] chr7 (47 HSPs)
chr7 (122-227)||(43938167-43938277)
chr7 (116-231)||(26825899-26826019)
chr7 (122-227)||(12929527-12929637)
chr7 (122-231)||(43937895-43938009)
chr7 (117-227)||(26825626-26825741)
chr7 (128-227)||(12931011-12931115)
chr7 (115-226)||(34454754-34454870)
chr7 (122-227)||(37563355-37563465)
chr7 (122-227)||(37563627-37563737)
chr7 (122-224)||(34454485-34454592)
chr7 (122-227)||(5280273-5280383)
chr7 (122-180)||(15827915-15827973)
chr7 (122-227)||(47081848-47081958)
chr7 (121-180)||(34454673-34454732)
chr7 (122-180)||(7159253-7159311)
chr7 (122-180)||(27557980-27558038)
chr7 (123-180)||(12928234-12928291)
chr7 (122-171)||(27558186-27558235)
chr7 (123-180)||(44545597-44545654)
chr7 (124-180)||(5636350-5636406)
chr7 (124-180)||(44545920-44545976)
chr7 (124-180)||(47082043-47082099)
chr7 (121-180)||(26825823-26825882)
chr7 (121-180)||(37563547-37563606)
chr7 (122-180)||(5280596-5280654)
chr7 (122-180)||(47121409-47121467)
chr7 (135-180)||(5636157-5636202)
chr7 (115-180)||(12928031-12928096)
chr7 (122-226)||(12928313-12928422)
chr7 (123-180)||(12929449-12929506)
chr7 (124-180)||(20947196-20947252)
chr7 (105-231)||(35262610-35262741)
chr7 (121-168)||(25049498-25049545)
chr7 (122-173)||(44545789-44545840)
chr7 (122-231)||(20947463-20947577)
chr7 (123-180)||(12930933-12930990)
chr7 (135-180)||(35262832-35262877)
chr7 (136-180)||(5636041-5636085)
chr7 (124-168)||(19980230-19980274)
chr7 (132-180)||(27557859-27557907)
chr7 (134-169)||(15828058-15828093)
chr7 (121-180)||(43938087-43938146)
chr7 (121-180)||(47121603-47121662)
chr7 (122-180)||(19980082-19980140)
chr7 (135-180)||(20947325-20947370)
chr7 (182-226)||(15827787-15827831)
chr7 (132-180)||(45586576-45586623)
[»] chr6 (52 HSPs)
chr6 (122-227)||(13480209-13480319)
chr6 (122-227)||(15819763-15819873)
chr6 (122-227)||(20560929-20561039)
chr6 (122-226)||(21880365-21880474)
chr6 (122-227)||(5064336-5064446)
chr6 (122-227)||(737970-738080)
chr6 (122-227)||(13480481-13480591)
chr6 (122-227)||(23291745-23291855)
chr6 (122-226)||(20994965-20995074)
chr6 (124-227)||(5064608-5064716)
chr6 (122-224)||(23292020-23292127)
chr6 (122-224)||(30234868-30234975)
chr6 (122-227)||(26503627-26503737)
chr6 (122-223)||(32337844-32337949)
chr6 (122-227)||(22494153-22494262)
chr6 (124-225)||(32337567-32337673)
chr6 (123-176)||(7612684-7612737)
chr6 (124-180)||(19296552-19296608)
chr6 (121-180)||(20561120-20561179)
chr6 (121-180)||(23291876-23291935)
chr6 (122-180)||(3299560-3299618)
chr6 (122-180)||(3299884-3299942)
chr6 (122-231)||(20774350-20774464)
chr6 (122-231)||(20994820-20994933)
chr6 (132-180)||(737901-737949)
chr6 (134-224)||(9607592-9607687)
chr6 (121-180)||(13480340-13480399)
chr6 (121-180)||(32337696-32337755)
chr6 (122-180)||(3586405-3586463)
chr6 (122-180)||(7612549-7612607)
chr6 (122-180)||(16704634-16704692)
chr6 (122-180)||(21544519-21544577)
chr6 (122-227)||(21880637-21880747)
chr6 (123-180)||(5064530-5064587)
chr6 (122-171)||(8427201-8427250)
chr6 (123-180)||(22494012-22494069)
chr6 (124-227)||(20561200-20561307)
chr6 (121-180)||(21880557-21880616)
chr6 (117-180)||(26542945-26543008)
chr6 (122-180)||(16706976-16707034)
chr6 (122-180)||(26503496-26503553)
chr6 (122-180)||(26542749-26542807)
chr6 (122-180)||(31879589-31879647)
chr6 (122-171)||(3586213-3586261)
chr6 (123-231)||(7612818-7612931)
chr6 (122-171)||(18865121-18865170)
chr6 (124-169)||(19296423-19296468)
chr6 (124-180)||(31879461-31879516)
chr6 (122-169)||(31386941-31386988)
chr6 (122-180)||(31879783-31879841)
chr6 (122-180)||(26542615-26542675)
chr6 (124-180)||(20774092-20774148)
[»] scaffold1493 (2 HSPs)
scaffold1493 (122-227)||(866-976)
scaffold1493 (123-180)||(788-845)
[»] scaffold0321 (3 HSPs)
scaffold0321 (122-227)||(10935-11045)
scaffold0321 (115-227)||(10656-10773)
scaffold0321 (125-180)||(10794-10849)
[»] scaffold0206 (2 HSPs)
scaffold0206 (122-227)||(10326-10436)
scaffold0206 (122-176)||(10461-10515)
[»] scaffold0202 (2 HSPs)
scaffold0202 (124-171)||(14238-14285)
scaffold0202 (122-224)||(14510-14617)
[»] scaffold0279 (3 HSPs)
scaffold0279 (122-180)||(11051-11109)
scaffold0279 (122-171)||(10854-10903)
scaffold0279 (132-180)||(11182-11230)
[»] scaffold0022 (3 HSPs)
scaffold0022 (122-171)||(120532-120581)
scaffold0022 (123-180)||(120331-120388)
scaffold0022 (124-169)||(120208-120253)
[»] scaffold0233 (3 HSPs)
scaffold0233 (123-218)||(8435-8535)
scaffold0233 (122-167)||(8578-8623)
scaffold0233 (116-167)||(8770-8821)
[»] scaffold0201 (3 HSPs)
scaffold0201 (124-180)||(14089-14145)
scaffold0201 (122-227)||(13894-14004)
scaffold0201 (182-227)||(14166-14211)


Alignment Details
Target: chr2 (Bit Score: 79; Significance: 4e-37; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 32519538 - 32519428
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||| ||||| |||||||||    
T  32519538 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagttactaatcctttcaatctgcccctgcaaatattaatcattt 32519439  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  32519438 gacttttggtc 32519428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 117 - 231
Target Start/End: Original strand, 20911126 - 20911245
Alignment:
Q  117 aaaatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaat 211  Q
    |||| ||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||      ||||| ||||||||||||| ||||| ||||    
T  20911126 aaaaggcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaat 20911225  T
Q  212 catttgacttttggtcataa 231  Q
    ||||||||||||||||||||    
T  20911226 catttgacttttggtcataa 20911245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 117 - 227
Target Start/End: Complemental strand, 1150325 - 1150210
Alignment:
Q  117 aaaatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaat 211  Q
    |||| ||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| |      ||||||||||||||||||| ||||| ||||    
T  1150325 aaaaggcttaaatatgtctttcgtgcctgcaaatataggtcatttgaattttcgtccctgaaattactaatcctttcaatctgcccctgcaaatattaat 1150226  T
Q  212 catttgacttttggtc 227  Q
    ||||||||||||||||    
T  1150225 catttgacttttggtc 1150210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 117 - 227
Target Start/End: Original strand, 16366959 - 16367074
Alignment:
Q  117 aaaatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaat 211  Q
    |||| |||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||      ||||| ||||||||||||| ||||| ||||    
T  16366959 aaaaggcttaaatatgtctttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaat 16367058  T
Q  212 catttgacttttggtc 227  Q
    ||||||||||||||||    
T  16367059 catttgacttttggtc 16367074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 22731915 - 22731805
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||| | ||||||      ||||||||||||| ||||| ||||| |||||||||    
T  22731915 gcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccgtgaagttactattcctttcaatctgtccctgcaaatattaatcattt 22731816  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  22731815 gacttttggtc 22731805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 1149938 - 1150048
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| || ||||||||||||||||||| ||||||||||||||||| ||||||||      ||||| ||||| ||||||| ||||| |||||||||    
T  1149938 gcttaaataggtatttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatcggcccctgcaaatattaatcattt 1150037  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  1150038 gacttttggtc 1150048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 226
Target Start/End: Original strand, 32519156 - 32519265
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |      ||||| |||| ||| |||| ||||| |||||||||    
T  32519156 gcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaaattactaatccttccaatatgctcctgcaaatattaatcattt 32519255  T
Q  217 gacttttggt 226  Q
    ||||||||||    
T  32519256 gacttttggt 32519265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 122 - 216
Target Start/End: Original strand, 10446833 - 10446932
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||      ||||| ||||||||||||| ||||| |||||||||    
T  10446833 gcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 10446932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 227
Target Start/End: Complemental strand, 16367338 - 16367236
Alignment:
Q  130 atgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttgacttttg 224  Q
    |||||||||||||||||||||||| | ||||||||||||||| ||||||||      ||||| |||| |||||||| ||||| |||||||||||||||||    
T  16367338 atgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaatcatttgacttttg 16367239  T
Q  225 gtc 227  Q
    |||    
T  16367238 gtc 16367236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 45663702 - 45663760
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  45663702 gcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgttcttgaagt 45663760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 19606920 - 19607028
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttga 218  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||      ||||| ||||||| |  || ||||| |||||||||||    
T  19606920 ttaaatatgtctttcgtccctgtaaatatatgtcatttgaattttcgtccctgaagttactaatccttccaatctgtcgttgcaaatattaatcatttga 19607019  T
Q  219 cttttggtc 227  Q
    |||||||||    
T  19607020 cttttggtc 19607028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 231
Target Start/End: Complemental strand, 20911512 - 20911399
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||| || ||||||||      || || |||||||  |||| ||||| |||||||||    
T  20911512 gcttaaatatgtctttcgtccctgtaaatataggtcatttgaatttttgtccctgaagttactaatcattccaatctg-tcctgcaaatattaatcattt 20911414  T
Q  217 gacttttggtcataa 231  Q
    |||||||||||||||    
T  20911413 gacttttggtcataa 20911399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 230
Target Start/End: Original strand, 22309427 - 22309545
Alignment:
Q  117 aaaatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaat 211  Q
    |||| ||||||||| |||||||||||||||||||||| |||||||||||||| ||   ||||||      ||||| ||||||||| ||| | ||| ||||    
T  22309427 aaaaggcttaaataggtctttcgtccctgcaaatataggtcatttgaattttagtcaatgaagttactaatccttccaatctgccactgcacatattaat 22309526  T
Q  212 catttgacttttggtcata 230  Q
    |||||||||||||||||||    
T  22309527 catttgacttttggtcata 22309545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 41846586 - 41846644
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  41846586 gcttaaataagtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagt 41846644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 43681857 - 43681906
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgt 171  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  43681857 gcttaaatatgtctttcgtccctgcaaatatatgtcatttgaattttcgt 43681906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 32519346 - 32519287
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  32519346 tgcttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagt 32519287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 45663891 - 45663781
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtc-atttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatt 215  Q
    |||||||||||||||||||||||| |||||| |||| |||||||||||||| ||||||||      |||||  |||||| ||||| ||||| ||||||||    
T  45663891 gcttaaatatgtctttcgtccctgtaaatat-agtcaatttgaattttcgtccctgaagttactaatccttcaaatctggccctgcaaatattaatcatt 45663793  T
Q  216 tgacttttggtc 227  Q
    ||||||||||||    
T  45663792 tgacttttggtc 45663781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 5608788 - 5608838
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgtt 172  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  5608788 gcttaaataggtctttcgtccctgcaaatataagtcattttaattttcgtt 5608838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 9694125 - 9694067
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| ||||||||||| |||||||||| ||||||||||||||||| ||||||||    
T  9694125 gcttaaataggtctttcgtccatgcaaatataggtcatttgaattttcgtccctgaagt 9694067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 22309814 - 22309756
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  22309814 gcttaaataggtctttcttccctgcaaatataggtcatttgaattttcgtccctgaagt 22309756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 41846393 - 41846499
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||  |||||||||||| |||||||| ||||||||||||||||| ||||||||      |||||  |||||||| ||| ||||| |||||||||    
T  41846393 gcttaaatagatctttcgtccctacaaatataggtcatttgaattttcgtccctgaagttagtaatccttctaatctgccactgcaaatattaatcattt 41846492  T
Q  217 gactttt 223  Q
    |||||||    
T  41846493 gactttt 41846499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 8089455 - 8089563
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttga 218  Q
    ||||||| || ||||||| ||||||||||| |||||||||||||||||   ||||||      ||||| ||||||||||||| |||||  ||||||||||    
T  8089455 ttaaataggtttttcgtctctgcaaatatatgtcatttgaattttcgtctttgaagttactaatccttccaatctgcccctgcaaatatcaatcatttga 8089554  T
Q  219 cttttggtc 227  Q
    |||||||||    
T  8089555 cttttggtc 8089563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 1150128 - 1150069
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| ||||| |||||||| ||||||||||||||||| ||||||||    
T  1150128 tgcttaaataggtctttcatccctacaaatataggtcatttgaattttcgtccctgaagt 1150069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 16367156 - 16367215
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| ||||| |||||||| ||||||||||||||||| ||||||||    
T  16367156 tgcttaaataggtctttcatccctacaaatataggtcatttgaattttcgtccctgaagt 16367215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 117 - 168
Target Start/End: Complemental strand, 17580713 - 17580662
Alignment:
Q  117 aaaatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaatttt 168  Q
    |||| ||||||||||||||||||||||| |||||||| ||||||||||||||    
T  17580713 aaaaggcttaaatatgtctttcgtccctacaaatataggtcatttgaatttt 17580662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 4375934 - 4375824
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| ||||||||||| |||||||||| ||||||| ||||||||| | ||||||      ||||| ||||||||| ||| |||   |||||||||    
T  4375934 gcttaaataggtctttcgtccatgcaaatatatgtcatttaaattttcgtccatgaagttactaatccttccaatctgccactgcaaaatttaatcattt 4375835  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  4375834 gacttttggtc 4375824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 17284744 - 17284802
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| || ||||||||||||||||||| |||||||||||||||||  |||||||    
T  17284744 gcttaaataggtttttcgtccctgcaaatataggtcatttgaattttcgtatctgaagt 17284802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 17366816 - 17366758
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||||||||||||||| ||||||||||   ||||||||||||||| ||||||||    
T  17366816 gcttaaatatgtctttcgtccttgcaaatatagtccatttgaattttcgtccctgaagt 17366758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 22731726 - 22731784
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||||||||| ||| ||||    
T  22731726 gcttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctaaagt 22731784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 28599810 - 28599752
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| ||||||| |||||| |||||||||||||||||||||||||  |||||||    
T  28599810 gcttaaataggtctttcatccctgtaaatataagtcatttgaattttcgtctctgaagt 28599752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 43682051 - 43682109
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||||||||||||| |||||||| || || |||||||||||||| ||||||||    
T  43682051 gcttaaatatgtctttcgtctctgcaaatttaggttatttgaattttcgtccctgaagt 43682109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 4375737 - 4375681
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||||||||||| ||||||||||| |  |||||||||||||| ||||||||    
T  4375737 ttaaatatgtctttcgtctctgcaaatatatgcaatttgaattttcgtccctgaagt 4375681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 18477257 - 18477201
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||||||||||||||||| ||||| ||||||||| | ||||||    
T  18477257 ttaaatatgtatttcgtccctgcaaatataagccatttaaattttcgtccatgaagt 18477201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 8089643 - 8089584
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| |||||||||||||| ||| ||||||||||||| | ||||||    
T  8089643 tgcttaaataggtctttcatccctgcaaatataggtcgtttgaattttcgtccttgaagt 8089584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 9959206 - 9959107
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttga 218  Q
    ||||||| |||||||||||||||||||||  |||||||||||||| || | ||||||      ||||||||||||||| ||  ||||| |||||||||||    
T  9959206 ttaaataagtctttcgtccctgcaaatattggtcatttgaattttggtccatgaagttactaatcctttcaatctgccactacaaatattaatcatttga 9959107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 20911321 - 20911262
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| | ||||  |||||||||||||| ||||||||||||||||| ||||||||    
T  20911321 tgcttaaataggacttttatccctgcaaatataggtcatttgaattttcgtccctgaagt 20911262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 8089831 - 8089726
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttga 218  Q
    ||||||||||||||||| | || ||||||| |||||||| ||||| || ||||||||      ||||| |||||||||||   ||||| |||||||||||    
T  8089831 ttaaatatgtctttcgttcttgtaaatataggtcatttgcatttttgtccctgaagttactaatccttccaatctgcccc---aaatattaatcatttga 8089735  T
Q  219 cttttggtc 227  Q
    |||||||||    
T  8089734 cttttggtc 8089726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 17284925 - 17284867
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| | |||||||||||||||||||| || |||||||||||  ||||||||||    
T  17284925 gcttaaatagggctttcgtccctgcaaatataggtaatttgaattttgattcctgaagt 17284867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 9693949 - 9693994
Alignment:
Q  135 tttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||||||||||||| ||||||||||||||||| ||| ||||    
T  9693949 tttcgtccctgcaaatataggtcatttgaattttcgtccctaaagt 9693994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 224
Target Start/End: Original strand, 18476910 - 18477015
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttga 218  Q
    ||||||| | ||||||||||||||| |||| |||||||||||||| || ||||||||      ||||| ||||||||| ||| |||   |||||||||||    
T  18476910 ttaaataggcctttcgtccctgcaactataggtcatttgaatttttgtccctgaagttactaatccttccaatctgccactgcaaaatttaatcatttga 18477009  T
Q  219 cttttg 224  Q
    ||||||    
T  18477010 cttttg 18477015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 17366627 - 17366683
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaa 178  Q
    ||||||||| ||||||| ||| |||||||||| ||||||||||||||| | ||||||    
T  17366627 gcttaaataggtctttcatccatgcaaatataggtcatttgaattttcttccctgaa 17366683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 17580516 - 17580460
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||| ||||||| ||| ||||||||||  |||||||||||||||| ||||||||    
T  17580516 ttaaataggtctttcatccttgcaaatatagatcatttgaattttcgtccctgaagt 17580460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 28599430 - 28599486
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||| ||||||||||| ||||||||||  |||||||||||||||| | ||||||    
T  28599430 ttaaataggtctttcgtccttgcaaatatagatcatttgaattttcgtccatgaagt 28599486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 28599617 - 28599561
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaa 178  Q
    ||||||||| |||||||| |||||||||||||   ||||||||||||||| ||||||    
T  28599617 gcttaaataggtctttcgcccctgcaaatatagaccatttgaattttcgtccctgaa 28599561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 178
Target Start/End: Complemental strand, 37984904 - 37984861
Alignment:
Q  135 tttcgtccctgcaaatataagtcatttgaattttcgttcctgaa 178  Q
    ||||||||||||||||||| ||||||||||||||| ||| ||||    
T  37984904 tttcgtccctgcaaatatatgtcatttgaattttctttcatgaa 37984861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 9959019 - 9959065
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaatttt 168  Q
    ||||||||  || ||||||||||||||||||| ||||||||||||||    
T  9959019 gcttaaattggtttttcgtccctgcaaatataggtcatttgaatttt 9959065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 22309625 - 22309683
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| |  ||| ||||||||||||||| ||||||||||||||||| ||| ||||    
T  22309625 gcttaaataggcattttgtccctgcaaatataggtcatttgaattttcgtccctaaagt 22309683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 9958827 - 9958875
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgt 171  Q
    ||||||||| || |||||||||||||||||||  ||||||||||||||||    
T  9958827 gcttaaataggt-tttcgtccctgcaaatatagatcatttgaattttcgt 9958875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 17285118 - 17285069
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgt 171  Q
    |||||||||  ||||||||||||| |||| || |||||||||||||||||    
T  17285118 gcttaaatagatctttcgtccctgaaaatttaggtcatttgaattttcgt 17285069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 37985106 - 37985061
Alignment:
Q  126 aaatatgtctttcgtccctgcaaatataagtcatttgaattttcgt 171  Q
    ||||| || ||||||||||||||||||| ||||||||| |||||||    
T  37985106 aaataagtatttcgtccctgcaaatatatgtcatttgatttttcgt 37985061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 19603739 - 19603779
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttg 162  Q
    |||||||||||| ||| |||||||||||||||| |||||||    
T  19603739 gcttaaatatgtttttggtccctgcaaatataactcatttg 19603779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 43682237 - 43682189
Alignment:
Q  122 gcttaaatatgtc-tttcgtccctgcaaatataagtcatttgaattttc 169  Q
    ||||||||| ||| |||||||||| |||||||| |||||||||||||||    
T  43682237 gcttaaataggtcatttcgtccctccaaatataggtcatttgaattttc 43682189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 3e-35; HSPs: 72)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 7 - 106
Target Start/End: Complemental strand, 8933139 - 8933042
Alignment:
Q  7 caggttacatcatattcatatatggaatatgccctcgtgtaaaatgaagtacttaaaatatgggttttttatgtctttaaaagtctaactcaactcacaa 106  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||    
T  8933139 caggttacatcatattcatatatggaatatgctctcgtgtaaaatgaagtacttaaaatatgggt-ttttatgtgttt-aaagtctaactcaactcacaa 8933042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 117 - 227
Target Start/End: Complemental strand, 41182284 - 41182169
Alignment:
Q  117 aaaatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaat 211  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||      || |||||||||||||||| ||||| ||||    
T  41182284 aaaaggcttaaatatgtctttcgtccctgcaaatatatgtcatttgaattttcgtccctgaagttactaatcatttcaatctgcccctgcaaatattaat 41182185  T
Q  212 catttgacttttggtc 227  Q
    ||||||||||||||||    
T  41182184 catttgacttttggtc 41182169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 123 - 231
Target Start/End: Original strand, 41801818 - 41801931
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttg 217  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||      ||||| ||||||||||||| ||||| ||||||||||    
T  41801818 cttaaatatgtttttcgtccctgcaaatataggtcatttgaattttcgttcctgaagttactaatccttccaatctgcccctgcaaatattaatcatttg 41801917  T
Q  218 acttttggtcataa 231  Q
    ||||||| ||||||    
T  41801918 acttttgatcataa 41801931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 36623353 - 36623463
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||| ||||||||||||||||||| | ||||||||||||||| ||||||||      |||||||||||||| |||| ||||| |||||||||    
T  36623353 gcttaaatatgtttttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcctttcaatctgctcctgcaaatattaatcattt 36623452  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  36623453 gacttttggtc 36623463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 122 - 225
Target Start/End: Original strand, 11478146 - 11478254
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| || ||||||||||||||||||| ||||||||||||||||| | ||||||      ||||||||||||||||||| ||||| |||||||||    
T  11478146 gcttaaataggtttttcgtccctgcaaatataggtcatttgaattttcgtccttgaagttactaatcctttcaatctgcccctgcaaatattaatcattt 11478245  T
Q  217 gacttttgg 225  Q
    |||||||||    
T  11478246 gacttttgg 11478254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 7785 - 7662
Alignment:
Q  113 atataaaatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatac 207  Q
    ||||| || ||||||||| |||||||||||||||||||||| | ||||||||||||||| | ||||||      ||||| |||| |||||||| |||||     
T  7785 atatagaaggcttaaataggtctttcgtccctgcaaatataggccatttgaattttcgtccatgaagttactaatccttccaatatgcccctgcaaatat 7686  T
Q  208 taatcatttgacttttggtcataa 231  Q
    ||||||||||||||||||||||||    
T  7685 taatcatttgacttttggtcataa 7662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 25287793 - 25287903
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||| ||||||||      ||||| ||||||||||||| ||||| |||||||||    
T  25287793 gcttaaatatgtctttcgtccctgtaaatattggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 25287892  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  25287893 gacttttggtc 25287903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 40525508 - 40525618
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| ||||||||| |||||||||||| ||||||||||||||||| ||||||||      ||||| ||||||||| ||| ||||| |||||||||    
T  40525508 gcttaaataagtctttcgttcctgcaaatatatgtcatttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaatattaatcattt 40525607  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  40525608 gacttttggtc 40525618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 43867094 - 43866984
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagtg-----tcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||| |||||||||||||||||||   ||||||||||||||| | ||||||      ||||||||||||||||||| ||||| |||||||||    
T  43867094 gcttaaatatgtttttcgtccctgcaaatatagaccatttgaattttcgtccatgaagttactaatcctttcaatctgcccctgcaaatattaatcattt 43866995  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  43866994 gacttttggtc 43866984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 27857123 - 27857015
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttga 218  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||      || || |||||||||| || ||||| |||||||||||    
T  27857123 ttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcattccaatctgcccttgcaaatattaatcatttga 27857024  T
Q  219 cttttggtc 227  Q
    |||||||||    
T  27857023 cttttggtc 27857015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 23424895 - 23424785
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||      || || ||||||||||||| ||||| |||||||||    
T  23424895 gcttaaatatgtctttcgttcctgcaaatataggccatttgaattttcgtccctgaagttactaatcattccaatctgcccctgcaaatattaatcattt 23424796  T
Q  217 gacttttggtc 227  Q
    || ||||||||    
T  23424795 gatttttggtc 23424785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 226
Target Start/End: Complemental strand, 26740101 - 26739991
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctg-cccctgtaaatactaatcatt 215  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||      ||||| ||||||| |||||  ||||| ||||||||    
T  26740101 gcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttgcaatctgccccctacaaatattaatcatt 26740002  T
Q  216 tgacttttggt 226  Q
    |||||||||||    
T  26740001 tgacttttggt 26739991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 36623736 - 36623626
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||| |||||| |      | ||| |||| |||||||| ||||| |||||||||    
T  36623736 gcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcattt 36623637  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  36623636 gacttttggtc 36623626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 37342783 - 37342893
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||| | ||||||||||||||||| |   ||||||||||||||||||||||||      ||||||||||| ||||||| ||||| |||||||||    
T  37342783 gcttaaatatctttttcgtccctgcaaatacagaccatttgaattttcgttcctgaagttactaatcctttcaatccgcccctgcaaatattaatcattt 37342882  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  37342883 gacttttggtc 37342893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 40422161 - 40422271
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| |||||||||||||||||||||| ||||| |||||||||||  |||||||      ||||| ||||||||| ||| ||||| |||||||||    
T  40422161 gcttaaataggtctttcgtccctgcaaatataggtcatatgaattttcgtctctgaagtaactaatccttccaatctgccactgcaaatattaatcattt 40422260  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  40422261 gacttttggtc 40422271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 43866712 - 43866822
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||| |||||| |      | ||| |||| |||||||| ||||| |||||||||    
T  43866712 gcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcattt 43866811  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  43866812 gacttttggtc 43866822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 123 - 227
Target Start/End: Complemental strand, 37343164 - 37343055
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttg 217  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||| |      | ||| |||| |||||||| ||||| ||||||||||    
T  37343164 cttaaatatgtctttcgcccctgcaaatataggtcatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcatttg 37343065  T
Q  218 acttttggtc 227  Q
    ||||||||||    
T  37343064 acttttggtc 37343055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 20096023 - 20096131
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttga 218  Q
    ||||||| |||||||||||||||||||||| |||||||||||||| || ||||||||      ||||| |||| |||| ||| ||||| |||||||||||    
T  20096023 ttaaataggtctttcgtccctgcaaatatatgtcatttgaatttttgtccctgaagttactaatccttccaatttgcctctgcaaatattaatcatttga 20096122  T
Q  219 cttttggtc 227  Q
    |||||||||    
T  20096123 cttttggtc 20096131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 35163500 - 35163612
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttga 218  Q
    ||||||| ||||||| |||||||||||||||| ||||||||||||||| | ||||||      ||||||||||||||| ||| |||   |||||||||||    
T  35163500 ttaaataggtctttcatccctgcaaatataagccatttgaattttcgtccttgaagttactgatcctttcaatctgccactgcaaaatttaatcatttga 35163599  T
Q  219 cttttggtcataa 231  Q
    |||||||||||||    
T  35163600 cttttggtcataa 35163612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 41251507 - 41251395
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagtg-----tcctttcaatctgcccctgtaaatactaatcatttga 218  Q
    |||||||| ||||||||||||||||||||||  ||||||||||| ||| | ||||||      || ||||||||| |||||| ||||| |||||||||||    
T  41251507 ttaaatatatctttcgtccctgcaaatataaaccatttgaatttccgtccatgaagttactaatcatttcaatctacccctgcaaatattaatcatttga 41251408  T
Q  219 cttttggtcataa 231  Q
    |||||||||||||    
T  41251407 cttttggtcataa 41251395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 41182087 - 41182028
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  41182087 tgcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagt 41182028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 41251124 - 41251238
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| |||||||||||||||||||||| |||| ||||||||||||  |||||||      ||||| |||| || ||||  ||||| |||||||||    
T  41251124 gcttaaataggtctttcgtccctgcaaatataggtcaattgaattttcgtctctgaagttactaatccttccaatatgtccctacaaatattaatcattt 41251223  T
Q  217 gacttttggtcataa 231  Q
    |||||||||||||||    
T  41251224 gacttttggtcataa 41251238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 7396 - 7452
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||    
T  7396 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcttccctgaagt 7452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 547432 - 547541
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||||| |||||||||||||||||||| | ||||| |||||| || ||||||||      ||||| ||||||||||||| ||||| |||||||||    
T  547432 gcttaaatatg-ctttcgtccctgcaaatataggccatttaaatttttgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 547530  T
Q  217 gacttttggtc 227  Q
     ||||||||||    
T  547531 cacttttggtc 547541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 547818 - 547708
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||  |||||||||||||||||||||  |||||||||||||||| ||| ||||      ||||| ||||||||| ||  ||||| |||||||||    
T  547818 gcttaaatagatctttcgtccctgcaaatatagatcatttgaattttcgtccctaaagttactaatccttccaatctgccactacaaatattaatcattt 547719  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  547718 gacttttggtc 547708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 24530039 - 24529981
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| ||||||||| |||||||||||| |||||||||||||||||| |||||||    
T  24530039 gcttaaataggtctttcgttcctgcaaatataggtcatttgaattttcgttactgaagt 24529981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 40422543 - 40422485
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  40422543 gcttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagt 40422485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 40525890 - 40525780
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||| |||| |||||||| ||||||| || |||||||||||||| |||||| |      || || ||||||||||||| ||||| |||||||||    
T  40525890 gcttaaatatatcttccgtccctgtaaatataggttatttgaattttcgtccctgaaattactaatcattccaatctgcccctgcaaatattaatcattt 40525791  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  40525790 gacttttggtc 40525780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 119 - 180
Target Start/End: Original strand, 22763593 - 22763654
Alignment:
Q  119 aatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||||| || |||||||| |||||||||| ||||||||||||||||| ||||||||    
T  22763593 aatgcttaaataggtatttcgtccttgcaaatataggtcatttgaattttcgtccctgaagt 22763654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 25287981 - 25287924
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  25287981 cttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagt 25287924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 230
Target Start/End: Complemental strand, 31690277 - 31690166
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttg 217  Q
    ||||||||||| ||||||||||| ||||||| |||| |||||||||||| ||||||||      || || ||||||||| ||| ||||| |||||||||     
T  31690277 cttaaatatgtatttcgtccctgtaaatataggtca-ttgaattttcgtccctgaagttactaatcattccaatctgccactgcaaatattaatcattta 31690179  T
Q  218 acttttggtcata 230  Q
    |||||||||||||    
T  31690178 acttttggtcata 31690166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 9632691 - 9632628
Alignment:
Q  117 aaaatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||| ||||||||| |||||| ||||||||||||||| ||||||||||||||||| | ||||||    
T  9632691 aaaaggcttaaataggtcttttgtccctgcaaatataggtcatttgaattttcgtccttgaagt 9632628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 11478336 - 11478277
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||||||  |||||||    
T  11478336 tgcttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtcgctgaagt 11478277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 23424513 - 23424620
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| ||||||| |||||| ||||||| |||||||||||||| || ||||||||      | ||  ||||||||||||| ||||| |||||||||    
T  23424513 gcttaaataggtctttcatccctgtaaatataggtcatttgaatttttgtccctgaagttactaattctaacaatctgcccctgcaaatattaatcattt 23424612  T
Q  217 gacttttg 224  Q
    ||||||||    
T  23424613 gacttttg 23424620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 23424703 - 23424644
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| ||||||||||||||  |||||||||||||||| ||||||||    
T  23424703 tgcttaaataggtctttcatccctgcaaatatagatcatttgaattttcgtccctgaagt 23424644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 29190352 - 29190411
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||| ||| ||||    
T  29190352 tgcttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctaaagt 29190411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 37342975 - 37343034
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||| | ||||||||    
T  37342975 tgcttaaataggtctttcatccctgcaaatataggtcatttgaattttcatccctgaagt 37343034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 40525698 - 40525639
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| |||||| ||||||| ||||||||||||||||| ||||||||    
T  40525698 tgcttaaataggtctttcatccctgtaaatataggtcatttgaattttcgtccctgaagt 40525639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 41251314 - 41251255
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||| | ||||||    
T  41251314 tgcttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccatgaagt 41251255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 43866902 - 43866843
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||| | ||||||||    
T  43866902 tgcttaaataagtctttcatccctgcaaatataggtcatttgaattttcatccctgaagt 43866843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 9632329 - 9632387
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| |||||| |||| |||||||||| ||||||||||||||||| ||||||||    
T  9632329 gcttaaataggtcttttgtccttgcaaatataggtcatttgaattttcgtccctgaagt 9632387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 29190161 - 29190271
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||| |||||| |||||||||||||| | ||| |||||||||||  |||||||      ||||| ||||||  ||||| ||||| |||||||||    
T  29190161 gcttaaatatatctttcctccctgcaaatataggccatctgaattttcgtctctgaagttactaatccttccaatctatccctgcaaatattaatcattt 29190260  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  29190261 gacttttggtc 29190271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 37713886 - 37713828
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| |||||||||| |||||||||| ||||| ||||||||||| ||||||||    
T  37713886 gcttaaatatatctttcgtccatgcaaatataggtcatatgaattttcgtccctgaagt 37713828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 40422355 - 40422412
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| |||||| ||||||||||||||| ||||||||||||||||| ||||||||    
T  40422355 gcttaaataggtcttt-gtccctgcaaatataggtcatttgaattttcgtccctgaagt 40422412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 15716258 - 15716201
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||| ||||||||||| |||||||||| ||||||| ||||||||| ||||||||    
T  15716258 cttaaataggtctttcgtccatgcaaatatatgtcatttaaattttcgtccctgaagt 15716201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 31690084 - 31690027
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||| || ||||||||||| ||||||| ||||||||||||||||| ||||||||    
T  31690084 cttaaataggtttttcgtccctgaaaatataggtcatttgaattttcgtccctgaagt 31690027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 20096397 - 20096349
Alignment:
Q  132 gtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  20096397 gtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagt 20096349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 22763977 - 22763865
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagtg-----tcctttcaatctgcccctgtaaatactaatcatttga 218  Q
    |||||||  |||||||||||||||  |||||  |||||||||||||||  |||||||      ||||| ||||||| |  |||||||| |||||||||||    
T  22763977 ttaaatagatctttcgtccctgcagctataaaccatttgaattttcgtctctgaagttactaatccttccaatctgtcattgtaaatattaatcatttga 22763878  T
Q  219 cttttggtcataa 231  Q
    |||||||||||||    
T  22763877 cttttggtcataa 22763865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 223
Target Start/End: Complemental strand, 29190540 - 29190436
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagtg-----tcctttcaatctgcccctgtaaatactaatcatttga 218  Q
    ||||||| ||||||||||||||||||||||   ||||||||||||  |  |||||||      ||||| ||||||||||||| ||||| |||||||||||    
T  29190540 ttaaataggtctttcgtccctgcaaatatagaccatttgaatttttatctctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 29190441  T
Q  219 ctttt 223  Q
    |||||    
T  29190440 ctttt 29190436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 37713699 - 37713755
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||| |||||||||||||  ||||||||||||||||||||||||| | ||||||    
T  37713699 ttaaataggtctttcgtccctataaatataagtcatttgaattttcgtccatgaagt 37713755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 41802011 - 41802067
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaag 179  Q
    |||||||| ||||||| |||||||||||||| | ||||||||||||||| |||||||    
T  41802011 cttaaataggtctttcatccctgcaaatataggccatttgaattttcgtccctgaag 41802067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 7586 - 7645
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| | ||||| |||||| ||||||| ||||||||||||||||| ||||||||    
T  7586 tgcttaaataggcctttcatccctgtaaatataggtcatttgaattttcgtccctgaagt 7645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 547628 - 547687
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| ||||||||| |||| ||||||||||||||||| | ||||||    
T  547628 tgcttaaataggtctttcatccctgcaattataggtcatttgaattttcgtccttgaagt 547687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 20096211 - 20096152
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| ||||| |||||||| ||||||||||||||| | ||||||||    
T  20096211 tgcttaaataggtctttcatccctacaaatataggtcatttgaattttcttccctgaagt 20096152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 36623546 - 36623605
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||| ||||| ||||||| |||||||||||||| ||||||||||||||| | ||||||||    
T  36623546 tgctcaaataggtctttcatccctgcaaatataggtcatttgaattttcatccctgaagt 36623605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 13566748 - 13566702
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaatttt 168  Q
    |||||||||||| |||||||||||||||| |||||| ||||||||||    
T  13566748 gcttaaatatgtttttcgtccctgcaaatgtaagtcgtttgaatttt 13566702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 22763785 - 22763727
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| |||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  22763785 gcttaaataggtctttcgtccctgcaaatatctgctatttgaattttcgtccctgaagt 22763727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 27436564 - 27436622
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||||  |||| |||||||||||||| ||| ||||||||||||| ||||||||    
T  27436564 gcttaaatatgcatttcatccctgcaaatataggtcgtttgaattttcgtccctgaagt 27436622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 27856933 - 27856883
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgt 171  Q
    |||||||||| ||||||| ||||||||||||||| ||||||||||| ||||    
T  27856933 tgcttaaataggtctttcatccctgcaaatataaatcatttgaattatcgt 27856883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 35163696 - 35163754
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| |||||||||||||  ||||||| |||||||||||||||||  |||||||    
T  35163696 gcttaaataagtctttcgtccctataaatataggtcatttgaattttcgtaactgaagt 35163754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 38600333 - 38600275
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| |  ||||||||||||||||||| |||||||||| |||||| ||||||||    
T  38600333 gcttaaataggcatttcgtccctgcaaatataggtcatttgaaatttcgtccctgaagt 38600275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 24529866 - 24529817
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgt 171  Q
    ||||||||| |||||| |||  ||||||||||||||||||||||||||||    
T  24529866 gcttaaataggtcttttgtctttgcaaatataagtcatttgaattttcgt 24529817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 224
Target Start/End: Original strand, 38619809 - 38619906
Alignment:
Q  132 gtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttgacttttg 224  Q
    ||||||||| ||||||||||||  |||||||||||||||| ||||||||      ||||| ||||||||| ||| |||   |||||||||||||||||    
T  38619809 gtctttcgttcctgcaaatatagatcatttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaaatttaatcatttgacttttg 38619906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 15716072 - 15716128
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||| ||||||  |||||||||||||| |||||||||||||||||  |||||||    
T  15716072 ttaaataggtcttttatccctgcaaatataggtcatttgaattttcgtctctgaagt 15716128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 26739907 - 26739849
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| ||| |||||||||| |||||||||| |||||| ||||||||    
T  26739907 tgcttaaataggtctttcatccttgcaaatataggtcatttgaa-tttcgtccctgaagt 26739849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 171
Target Start/End: Original strand, 40933180 - 40933227
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgt 171  Q
    ||||||| |||||| ||| |||||||||||||| ||||||||||||||    
T  40933180 ttaaataggtcttttgtctctgcaaatataagttatttgaattttcgt 40933227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 27437618 - 27437560
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||||  |||| |||||||||||||| | | ||||||||||||| ||||||||    
T  27437618 gcttaaatatgcatttcatccctgcaaatataggccgtttgaattttcgtccctgaagt 27437560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 31689896 - 31689954
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| |||||| |||||||||||||||   ||||||||||||||| | ||||||    
T  31689896 gcttaaataggtcttttgtccctgcaaatatagaccatttgaattttcgtccatgaagt 31689954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 40933363 - 40933309
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaa 178  Q
    ||||||| |||||||||| ||| ||||||| |||||||||||||| ||| |||||    
T  40933363 ttaaataggtctttcgtctctgtaaatataggtcatttgaatttttgtttctgaa 40933309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 11478463 - 11478418
Alignment:
Q  182 tcctttcaatctgcccctgtaaatactaatcatttgacttttggtc 227  Q
    ||||| ||||||||||||| ||||| ||||||||||| ||||||||    
T  11478463 tccttccaatctgcccctgcaaatattaatcatttgatttttggtc 11478418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 27856808 - 27856853
Alignment:
Q  182 tcctttcaatctgcccctgtaaatactaatcatttgacttttggtc 227  Q
    ||||| ||||| ||||||| ||||| ||||||||||||||||||||    
T  27856808 tccttccaatccgcccctgcaaatattaatcatttgacttttggtc 27856853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 23514022 - 23514070
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcg 170  Q
    ||||||||| |||||||||| ||||||||| |  |||||||||||||||    
T  23514022 gcttaaataagtctttcgtctctgcaaataaagttcatttgaattttcg 23514070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 117 - 231
Target Start/End: Complemental strand, 10998261 - 10998142
Alignment:
Q  117 aaaatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaat 211  Q
    ||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||| ||||||||      ||||| ||||||||||||| ||||| ||||    
T  10998261 aaaatgcttaaatatgtttttcgtctctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaat 10998162  T
Q  212 catttgacttttggtcataa 231  Q
    ||||||||||||||||||||    
T  10998161 catttgacttttggtcataa 10998142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 1741388 - 1741498
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||      ||||| |||||||||| || ||||| |||||||||    
T  1741388 gcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatattaatcattt 1741487  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  1741488 gacttttggtc 1741498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 55037050 - 55036942
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttga 218  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||      ||||| ||||||||||||| ||||| |||||||||||    
T  55037050 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgttcttgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 55036951  T
Q  219 cttttggtc 227  Q
     ||||||||    
T  55036950 tttttggtc 55036942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 117 - 227
Target Start/End: Original strand, 11312731 - 11312846
Alignment:
Q  117 aaaatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaat 211  Q
    |||| |||||||||||||||||||||||  ||||||| ||||||||||||||||| ||||||||      ||||| || |||||||||| ||||| ||||    
T  11312731 aaaaggcttaaatatgtctttcgtccctctaaatataggtcatttgaattttcgtccctgaagttaccaatccttgcagtctgcccctgcaaatattaat 11312830  T
Q  212 catttgacttttggtc 227  Q
    ||||||||||||||||    
T  11312831 catttgacttttggtc 11312846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 55036672 - 55036780
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttga 218  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||      ||||| ||||||||||||| ||||| ||||||||| |    
T  55036672 ttaaataggtctttcgtccctgcaaatataggtcatttgaattttcattcctgaagttactaatccttccaatctgcccctgcaaatattaatcatttaa 55036771  T
Q  219 cttttggtc 227  Q
    | |||||||    
T  55036772 cctttggtc 55036780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 231
Target Start/End: Complemental strand, 10749779 - 10749665
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||      || || ||||||||| | | ||||| |||||||||    
T  10749779 gcttgaatatgtctttcgtccctgcaaatataggtcatttaaattttcgtccctgaagttactaatctttccaatctgcctcagcaaatattaatcattt 10749680  T
Q  217 gacttttggtcataa 231  Q
    |||||||||||||||    
T  10749679 gacttttggtcataa 10749665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 225
Target Start/End: Complemental strand, 21300514 - 21300408
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttga 218  Q
    ||||||| |||||||||||||||||||||| || ||||||||||||||  |||||||      |||||||| |||| ||||||||||| |||||||||||    
T  21300514 ttaaataggtctttcgtccctgcaaatatatgttatttgaattttcgtctctgaagttactaatcctttcagtctgtccctgtaaatattaatcatttga 21300415  T
Q  219 cttttgg 225  Q
    |||||||    
T  21300414 cttttgg 21300408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 51279232 - 51279338
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||| || |||||      || ||||||| |||||||| ||||| |||||||||    
T  51279232 gcttaaatatgtctttcgtccctgcaaatataggttatttgaattttcgtcccagaagttactaatcatttcaatttgcccctgcaaatattaatcattt 51279331  T
Q  217 gactttt 223  Q
    |||||||    
T  51279332 gactttt 51279338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 123 - 227
Target Start/End: Complemental strand, 53037409 - 53037300
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagtg-----tcctttcaatctgcccctgtaaatactaatcatttg 217  Q
    ||||||||| ||||||||| ||| ||||||| ||||||||||||||||| |||  |||      ||||||||||||||||||| ||||| ||||||||||    
T  53037409 cttaaatatatctttcgtctctgtaaatataggtcatttgaattttcgtccctacagttactgatcctttcaatctgcccctgcaaatattaatcatttg 53037310  T
Q  218 acttttggtc 227  Q
    ||||||||||    
T  53037309 acttttggtc 53037300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 224
Target Start/End: Complemental strand, 40257261 - 40257149
Alignment:
Q  117 aaaatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaat 211  Q
    |||| |||||||||||| ||||||||||  |||||||||| |||||||||||||| |||||| |      || |||||||||||||||| ||||| ||||    
T  40257261 aaaaggcttaaatatgtttttcgtccctataaatataagttatttgaattttcgtccctgaaattactaatcatttcaatctgcccctgcaaatattaat 40257162  T
Q  212 catttgacttttg 224  Q
    |||||||||||||    
T  40257161 catttgacttttg 40257149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 10749319 - 10749429
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| |||||||||||||| ||||||| ||||||||||||||||| ||||||||      |||||  |||||  ||||| ||||| |||||||||    
T  10749319 gcttaaataggtctttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatccttctaatctatccctgcaaatattaatcattt 10749418  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  10749419 gacttttggtc 10749429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 33458301 - 33458191
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| |||||||||||||||||||||| |||||||||||| |||| ||||||||      |||||  |||||| | ||| ||||| |||||||||    
T  33458301 gcttaaataggtctttcgtccctgcaaatataggtcatttgaattgtcgtccctgaagttactaatccttctaatctgtcactgcaaatattaatcattt 33458202  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  33458201 gacttttggtc 33458191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 40257062 - 40257006
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  40257062 ttaaataggtctttcatccctgcaaatataggtcatttgaattttcgttcctgaagt 40257006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 55036860 - 55036801
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  55036860 tgcttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagt 55036801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 24576480 - 24576422
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| || ||||||||||||||||||| ||||||||||||||||| ||||||||    
T  24576480 gcttaaataagtttttcgtccctgcaaatataggtcatttgaattttcgtccctgaagt 24576422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 30804231 - 30804121
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| || ||||||||||  |||||||  |||||||||||||||||||||||||      ||||| ||||||| | ||| ||||| |||||||||    
T  30804231 gcttaaataagtatttcgtccctttaaatatatatcatttgaattttcgttcctgaagttactaatccttccaatctgtcactgcaaatattaatcattt 30804132  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  30804131 gacttttggtc 30804121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 40256879 - 40256985
Alignment:
Q  126 aaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttgact 220  Q
    ||||| ||||||||||| |||||||||| || |||||||||||||| ||||||||      ||||| |||| ||||| || ||||| |||||||||||||    
T  40256879 aaataggtctttcgtccatgcaaatataggttatttgaattttcgtccctgaagttactaatccttccaatatgcccttgcaaatattaatcatttgact 40256978  T
Q  221 tttggtc 227  Q
    |||||||    
T  40256979 tttggtc 40256985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 21255730 - 21255783
Alignment:
Q  127 aatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||| ||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  21255730 aataagtctttcatccctgcaaatataagtcatttgaattttcattcctgaagt 21255783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 115 - 171
Target Start/End: Complemental strand, 30654869 - 30654813
Alignment:
Q  115 ataaaatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgt 171  Q
    |||||| |||| |||| |||||||||||||||||||||| |||||||||||||||||    
T  30654869 ataaaaggctttaataggtctttcgtccctgcaaatataggtcatttgaattttcgt 30654813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 11312928 - 11312987
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| ||| |||||||||| ||||||||||||||||| ||||||||    
T  11312928 tgcttaaataagtctttcatccttgcaaatataggtcatttgaattttcgtccctgaagt 11312987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 21300326 - 21300385
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||| | ||||||||    
T  21300326 tgcttaaataggtctttcatccctgcaaatataggtcatttgaattttcatccctgaagt 21300385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 22129197 - 22129138
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| |||||| ||||||| ||||||||||||||||| ||||||||    
T  22129197 tgcttaaataagtctttcatccctgtaaatataggtcatttgaattttcgtccctgaagt 22129138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 124 - 171
Target Start/End: Original strand, 24576291 - 24576338
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgt 171  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||    
T  24576291 ttaaataggtctttcgtccctgcaaatataagccatttgaattttcgt 24576338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 53037218 - 53037159
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| ||| |||||||||| ||||||||||||||||| ||||||||    
T  53037218 tgcttaaataggtctttcatccttgcaaatataggtcatttgaattttcgtccctgaagt 53037159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 30804036 - 30803978
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| || ||||||||||||||||||| ||||||||||||||||| || |||||    
T  30804036 gcttaaataggtttttcgtccctgcaaatataggtcatttgaattttcgtcccggaagt 30803978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 33989203 - 33989146
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| || ||||||||||||||||||| |||||||||||||||| |||||||||    
T  33989203 gcttaaataggtttttcgtccctgcaaatataggtcatttgaattttcg-tcctgaagt 33989146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 53037028 - 53037086
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| ||||||| |||||| ||||||| ||||||||||||||||| ||||||||    
T  53037028 gcttaaataagtctttcatccctgtaaatataggtcatttgaattttcgtccctgaagt 53037086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 30890384 - 30890339
Alignment:
Q  135 tttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||    
T  30890384 tttcgtcccagcaaatataagtcatttgaattttcgtccctgaagt 30890339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 180
Target Start/End: Original strand, 10997876 - 10997936
Alignment:
Q  120 atgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||||||| ||| || |||||||||| | ||||||||||||||||| ||||||||    
T  10997876 atgcttaaatatgtattttgttcctgcaaatacaggtcatttgaattttcgtccctgaagt 10997936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 10749509 - 10749450
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||| |||| ||||||| |||||||||||||| ||||||| ||||||||| ||||||||    
T  10749509 tgctttaataggtctttcatccctgcaaatataggtcatttaaattttcgtccctgaagt 10749450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 171
Target Start/End: Complemental strand, 33458104 - 33458057
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgt 171  Q
    ||||||| ||||||||||||| |||||||| |||||||||||||||||    
T  33458104 ttaaataggtctttcgtccctacaaatataggtcatttgaattttcgt 33458057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 231
Target Start/End: Complemental strand, 35432722 - 35432619
Alignment:
Q  133 tctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttgacttttggtc 227  Q
    |||||||| |||| |||||||||| |||||||||||||||| | ||||      ||||| ||||||||| ||| ||||| |||| ||||||||||| |||    
T  35432722 tctttcgttcctgtaaatataagttatttgaattttcgttcataaagttattaatccttccaatctgccactgcaaatattaattatttgactttttgtc 35432623  T
Q  228 ataa 231  Q
    ||||    
T  35432622 ataa 35432619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 11313046 - 11313008
Alignment:
Q  189 aatctgcccctgtaaatactaatcatttgacttttggtc 227  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  11313046 aatctgcccctgcaaatactaatcatttgacttttggtc 11313008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 30654485 - 30654543
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| ||||||| |||||||||||||||||| |||||| |||||| | ||||||    
T  30654485 gcttaaataagtctttcatccctgcaaatataagtcgtttgaaatttcgtccttgaagt 30654543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 176
Target Start/End: Original strand, 35432407 - 35432461
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctg 176  Q
    ||||||||| ||||||||||||||||||||||   ||||||||||||||| ||||    
T  35432407 gcttaaataggtctttcgtccctgcaaatatagaccatttgaattttcgtccctg 35432461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 231
Target Start/End: Complemental strand, 51279537 - 51279499
Alignment:
Q  193 tgcccctgtaaatactaatcatttgacttttggtcataa 231  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  51279537 tgcccctgtaaatattaatcatttgacttttggtcataa 51279499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 21255914 - 21255865
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgt 171  Q
    ||||||||| ||||||||| ||||||||||||  ||||||||||||||||    
T  21255914 gcttaaataagtctttcgttcctgcaaatatagatcatttgaattttcgt 21255865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 30803848 - 30803905
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||| ||||||||||||| ||| |||| |||||||||||||||||  |||||||    
T  30803848 cttaaataggtctttcgtcccttcaactataggtcatttgaattttcgtctctgaagt 30803905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 167
Target Start/End: Original strand, 46670249 - 46670294
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattt 167  Q
    ||||||||| |||||| ||||||||||||||| |||||||||||||    
T  46670249 gcttaaataagtcttttgtccctgcaaatataggtcatttgaattt 46670294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 35432541 - 35432493
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcg 170  Q
    ||||||||| ||||||||||||||||||||||   ||||||||||||||    
T  35432541 gcttaaataggtctttcgtccctgcaaatatagaccatttgaattttcg 35432493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 10998064 - 10998006
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| | ||||| |||||||||||||| ||||||||||||||||| | ||||||    
T  10998064 tgcttaaata-gactttcatccctgcaaatatatgtcatttgaattttcgtccatgaagt 10998006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 38643039 - 38642988
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttc 173  Q
    ||||||||| || ||||||| |||||||||||  ||||||||||||||||||    
T  38643039 gcttaaataggtgtttcgtctctgcaaatatagatcatttgaattttcgttc 38642988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 51279424 - 51279482
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| | ||||| ||| |||||||||| ||||||||||||||||| ||||||||    
T  51279424 tgcttaaataggactttcatcc-tgcaaatataggtcatttgaattttcgtccctgaagt 51279482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 38642632 - 38642690
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| || |||||||| |||||||||||||||||| |||||  || ||||||||    
T  38642632 gcttaaataggtatttcgtccatgcaaatataagtcatttaaatttctgtccctgaagt 38642690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 10749637 - 10749592
Alignment:
Q  182 tcctttcaatctgcccctgtaaatactaatcatttgacttttggtc 227  Q
    ||||| ||||||||||| | ||||| ||||||||||||||||||||    
T  10749637 tccttccaatctgccccagcaaatattaatcatttgacttttggtc 10749592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 33989401 - 33989344
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||||||||||||   ||||||||||  |||||||||||||||| | ||||||    
T  33989401 cttaaatatgtctttcgtagatgcaaatatatatcatttgaattttcgtccatgaagt 33989344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 49650 - 49706
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaa 178  Q
    ||||||||| || ||| |||||||||||||||||  ||||||| |||||| ||||||    
T  49650 gcttaaataggtattttgtccctgcaaatataagctatttgaaatttcgtccctgaa 49706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 28310731 - 28310683
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcg 170  Q
    ||||||||| ||||||||| || ||||||||| ||||||||||| ||||    
T  28310731 gcttaaataggtctttcgttccagcaaatataggtcatttgaatcttcg 28310683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 30890588 - 30890532
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||| |||||||||  ||| ||||||| ||||||||||||||| | ||||||||    
T  30890588 ttaaataggtctttcgtttctgtaaatataggtcatttgaattttcatccctgaagt 30890532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 46670452 - 46670507
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||  |||||||||||| |||||||| ||||||||||||||| | ||||||||    
T  46670452 ttaaatagatctttcgtccct-caaatatatgtcatttgaattttcatccctgaagt 46670507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 6e-30; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 25253469 - 25253359
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||      ||||| |||||||||| || |||||||||||||||    
T  25253469 gcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatactaatcattt 25253370  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  25253369 gacttttggtc 25253359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 25317260 - 25317150
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||      ||||| |||||||||| || |||||||||||||||    
T  25317260 gcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatactaatcattt 25317161  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  25317160 gacttttggtc 25317150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 32052607 - 32052497
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||      ||||| ||||||||||||| ||||| |||||||||    
T  32052607 gcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 32052508  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  32052507 gacttttggtc 32052497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 117 - 227
Target Start/End: Complemental strand, 33735701 - 33735586
Alignment:
Q  117 aaaatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaat 211  Q
    |||| ||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||      ||||| ||||||||||||| ||||| ||||    
T  33735701 aaaaggcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaat 33735602  T
Q  212 catttgacttttggtc 227  Q
    ||||||||||||||||    
T  33735601 catttgacttttggtc 33735586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 13064792 - 13064682
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||  || ||||      ||||| ||||||||||||| ||||| |||||||||    
T  13064792 gcttaaatatgtctttcgtccctgcaaatatatgtcatttgaattttcgtctctaaagttactaatccttccaatctgcccctgcaaatattaatcattt 13064693  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  13064692 gacttttggtc 13064682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 14745449 - 14745559
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||| | ||||||||      ||||| ||||||||||||| ||||| |||||||||    
T  14745449 gcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 14745548  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  14745549 gacttttggtc 14745559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 231
Target Start/End: Complemental strand, 37945376 - 37945263
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||      |||||||||||||||| || ||||| |||||||||    
T  37945376 gcttaaatatgtctttcgtccctgcaaatataggtca-ttgaattttcgtccctgaagttactaatcctttcaatctgcccttgcaaatattaatcattt 37945278  T
Q  217 gacttttggtcataa 231  Q
    |||||||| ||||||    
T  37945277 gacttttgatcataa 37945263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 6422003 - 6421895
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttga 218  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||| |||||| |      |||||||||| |||||||| ||||| |||||||||||    
T  6422003 ttaaataggtctttcgcccctgcaaatataagtcatttgaattttcgtccctgaaattactaatcctttcaatatgcccctgcaaatattaatcatttga 6421904  T
Q  219 cttttggtc 227  Q
    |||||||||    
T  6421903 cttttggtc 6421895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 122 - 224
Target Start/End: Complemental strand, 12991171 - 12991064
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||      ||||| |||||| |||||| ||||| |||||||||    
T  12991171 gcttaaatatgtctttcgtccctgcaaatatatgtcatttgaattttcgtctctgaagttactaatccttccaatctacccctgcaaatattaatcattt 12991072  T
Q  217 gacttttg 224  Q
    ||||||||    
T  12991071 gacttttg 12991064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 25253087 - 25253197
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||||||| ||||||||      ||||| |||| |||||||| ||||| |||||||||    
T  25253087 gcttaaatatgtctttcatccctgcaaatatagttcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcattt 25253186  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  25253187 gacttttggtc 25253197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 25316877 - 25316987
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||||||| ||||||||      ||||| |||| |||||||| ||||| |||||||||    
T  25316877 gcttaaatatgtctttcatccctgcaaatatagttcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcattt 25316976  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  25316977 gacttttggtc 25316987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 6421625 - 6421733
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttga 218  Q
    |||||||||||||||||||||||||||||| |||||||||||||| || | ||||||      || |||||||||||||||  ||||| |||||||||||    
T  6421625 ttaaatatgtctttcgtccctgcaaatatatgtcatttgaatttttgtccttgaagttactaatcttttcaatctgcccctacaaatattaatcatttga 6421724  T
Q  219 cttttggtc 227  Q
    |||||||||    
T  6421725 cttttggtc 6421733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 32052225 - 32052332
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||||||||| ||||||||      ||||| ||||| ||||||| ||||| |||||||||    
T  32052225 gcttaaatatgtttttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatccgcccctgcaaatattaatcattt 32052324  T
Q  217 gacttttg 224  Q
    ||||||||    
T  32052325 gacttttg 32052332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 37944995 - 37945105
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| ||||||||||| || ||||||| ||||||||||||||||| ||||||||      ||||| |||| |||||||| ||||| |||||||||    
T  37944995 gcttaaataggtctttcgtccttgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcattt 37945094  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  37945095 gacttttggtc 37945105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 21261054 - 21260997
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  21261054 cttaaatatgtcttttgtccctgcaaatataggtcatttgaattttcgttcctgaagt 21260997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 18934714 - 18934772
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||    
T  18934714 gcttaaatatgtctttcatccctgcaaatataagtcatttgaattttcgtccatgaagt 18934772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 103 - 180
Target Start/End: Original strand, 21260846 - 21260924
Alignment:
Q  103 acaaagttaaatataaa-atgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||| ||||||||| | |||||||||||  ||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  21260846 acaaatttaaatatatatatgcttaaatagttctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagt 21260924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 27753673 - 27753731
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||    
T  27753673 gcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctaaagt 27753731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 218
Target Start/End: Complemental strand, 7015892 - 7015791
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| ||||||||||| |||||||||||||| ||||||||||||| ||||||||      ||||| ||||||||| ||| ||||| |||||||||    
T  7015892 gcttaaataggtctttcgtccttgcaaatataagtcgtttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaatattaatcattt 7015793  T
Q  217 ga 218  Q
    ||    
T  7015792 ga 7015791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 226
Target Start/End: Original strand, 33735314 - 33735423
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||||||||||||||||| |||||||| | ||||||| ||||||| |||||| |      ||||| ||||||| ||||| ||||| |||||||||    
T  33735314 gcttaaatatgtctttcgtccctacaaatataggccatttgatttttcgtccctgaaattactaatccttccaatctgtccctgcaaatattaatcattt 33735413  T
Q  217 gacttttggt 226  Q
    ||||||||||    
T  33735414 gacttttggt 33735423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 41339549 - 41339606
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||    
T  41339549 cttaaatatgtctttcgtccctgcaaatatagatcatttgaattttcgtccctgaagt 41339606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 14745690 - 14745586
Alignment:
Q  128 atatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttgacttt 222  Q
    ||||||||||||||||| |||||||| | |||||||||||||||  |||||||      ||||| |||||||||| || ||||| |||||||||||||||    
T  14745690 atatgtctttcgtccctacaaatataggccatttgaattttcgtcgctgaagttactaatccttccaatctgcccttgcaaatattaatcatttgacttt 14745591  T
Q  223 tggtc 227  Q
    |||||    
T  14745590 tggtc 14745586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 18013803 - 18013744
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  18013803 tgcttaaataagtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagt 18013744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 33735506 - 33735565
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  33735506 tgcttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagt 33735565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 7015509 - 7015619
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| |||||||||||||||||||||| | ||||||||||||| | | ||||||      || || ||||||||| ||| ||||| |||||||||    
T  7015509 gcttaaataggtctttcgtccctgcaaatataggccatttgaattttcatccatgaagttactaatcattccaatctgccactgcaaatattaatcattt 7015608  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  7015609 gacttttggtc 7015619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 22533584 - 22533642
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| ||||||||||||||||||| || ||||||||||||||||| ||||||||    
T  22533584 gcttaaataggtctttcgtccctgcaaatttaggtcatttgaattttcgtccctgaagt 22533642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 16118145 - 16118194
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgt 171  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  16118145 gcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgt 16118194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 226
Target Start/End: Complemental strand, 18013985 - 18013886
Alignment:
Q  131 tgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttgacttttgg 225  Q
    ||||||||||||||||||||||| | ||||| |||||||| |||||||||      ||||||||||||||| ||| ||||| |||| |||||||||||||    
T  18013985 tgtctttcgtccctgcaaatataggccatttaaattttcg-tcctgaagttaccaatcctttcaatctgcctctgcaaatattaattatttgacttttgg 18013887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 6421819 - 6421874
Alignment:
Q  125 taaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  6421819 taaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagt 6421874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 12990979 - 12990920
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||| | ||||||    
T  12990979 tgcttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccatgaagt 12990920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 13064600 - 13064541
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||| | ||||||    
T  13064600 tgcttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccatgaagt 13064541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 22024064 - 22024122
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||| ||| |||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  22024064 gcttatataggtctttcgtccctgcaaatataggtcatttgaattttcgtccttgaagt 22024122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 22533391 - 22533449
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| |||||||| || |||||||||| ||||||||||||||||| ||||||||    
T  22533391 gcttaaataggtctttcgcccttgcaaatataggtcatttgaattttcgtccctgaagt 22533449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 25253276 - 25253218
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||||||||| | ||||||    
T  25253276 gcttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccttgaagt 25253218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 34404485 - 34404543
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| ||||||||| |||||||||||| |||||||||||||||||  |||||||    
T  34404485 gcttaaataggtctttcgttcctgcaaatataggtcatttgaattttcgtcactgaagt 34404543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 22024253 - 22024204
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgt 171  Q
    ||||||||| |||||||||| ||||||||||| |||||||||||||||||    
T  22024253 gcttaaatacgtctttcgtctctgcaaatataggtcatttgaattttcgt 22024204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 16117964 - 16118020
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||| |||||| ||||||| ||||||| ||||||||||||||||| ||||||||    
T  16117964 ttaaataggtcttttgtccctgtaaatataggtcatttgaattttcgtccctgaagt 16118020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 227
Target Start/End: Complemental strand, 20705096 - 20704986
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaa--atataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatt 215  Q
    ||||||||||||||||||||||| ||  ||||| |||||||||||||||||   ||||||      || |||||||||| ||||| ||||| ||||||||    
T  20705096 cttaaatatgtctttcgtccctgtaaatatataggtcatttgaattttcgtctttgaagttactaatcttttcaatctg-ccctgcaaatattaatcatt 20704998  T
Q  216 tgacttttggtc 227  Q
    ||||||||||||    
T  20704997 tgacttttggtc 20704986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 12628394 - 12628347
Alignment:
Q  133 tctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||||||||| |||||||||||||| ||||||||    
T  12628394 tctttcgtccatgcaaatataagtgatttgaattttcgtccctgaagt 12628347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 27753480 - 27753586
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||| || |||||||||||||||||||||| |||| |||||||||||| | ||||||      ||||| ||| ||||| ||| ||||| |||||||||    
T  27753480 gcttaagtaggtctttcgtccctgcaaatataggtca-ttgaattttcgtccatgaagttactaatccttccaaactgccactgcaaatattaatcattt 27753578  T
Q  217 gacttttg 224  Q
    ||||||||    
T  27753579 gacttttg 27753586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 31118951 - 31119014
Alignment:
Q  117 aaaatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||| |||||||||  ||||||||||||||||||||| | ||||||||||||| | ||||||||    
T  31118951 aaaaggcttaaatagatctttcgtccctgcaaatataggccatttgaattttcatccctgaagt 31119014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 32052417 - 32052476
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| || |||| ||||||||||||||  |||||||||||||||| ||||||||    
T  32052417 tgcttaaataggtttttcatccctgcaaatatagttcatttgaattttcgtccctgaagt 32052476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 34404674 - 34404627
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttc 169  Q
    ||||||||| ||||||||||| |||||||||| |||||||||||||||    
T  34404674 gcttaaataagtctttcgtccttgcaaatataggtcatttgaattttc 34404627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 8323245 - 8323188
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||| |||||||||||| ||||||||| | |||||||||||| || ||||||||    
T  8323245 cttaaataggtctttcgtcccagcaaatataggccatttgaatttttgtccctgaagt 8323188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 9915432 - 9915481
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgt 171  Q
    ||||||||| |||||||||||||  ||||||| |||||||||||||||||    
T  9915432 gcttaaataggtctttcgtccctataaatataggtcatttgaattttcgt 9915481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 16118334 - 16118285
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgt 171  Q
    ||||||||| ||||||| |||||||||||||||| | |||||||||||||    
T  16118334 gcttaaataggtctttcatccctgcaaatataagccgtttgaattttcgt 16118285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 22533760 - 22533715
Alignment:
Q  135 tttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||||||||||||| ||||||||||||||||| || |||||    
T  22533760 tttcgtccctgcaaatataggtcatttgaattttcgtccccgaagt 22533715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 41339357 - 41339413
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||  ||||| || || ||||||||||||||||||||||||||| ||||||||    
T  41339357 ttaaataaatctttagttccggcaaatataagtcatttgaattttcgtccctgaagt 41339413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 7015703 - 7015750
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttc 169  Q
    ||||||||| |||||| |||||||||||||||  ||||||||||||||    
T  7015703 gcttaaataggtcttttgtccctgcaaatatatatcatttgaattttc 7015750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 18934903 - 18934856
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttc 169  Q
    ||||||||| || ||||||||||| ||||||| |||||||||||||||    
T  18934903 gcttaaataggtatttcgtccctgtaaatataggtcatttgaattttc 18934856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 25317067 - 25317008
Alignment:
Q  122 gcttaaatatgtctttcg-tccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| |||||||  |||||||||||||| ||||||||||||||||| | ||||||    
T  25317067 gcttaaataggtctttctatccctgcaaatataggtcatttgaattttcgtccttgaagt 25317008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 37945185 - 37945126
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| ||||||||||||||  ||| |||||||||||| | ||||||    
T  37945185 tgcttaaataggtctttcatccctgcaaatatagatcaattgaattttcgtccatgaagt 37945126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 8323439 - 8323381
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| |||||||| ||||||||||||| |  |||||||||||||| | ||||||    
T  8323439 gcttaaataggtctttcgcccctgcaaatatatgctatttgaattttcgtccttgaagt 8323381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 8323059 - 8323115
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||| ||||||| |||||  ||||||| ||||||||||||||||| | ||||||    
T  8323059 ttaaataggtctttcatccctataaatataggtcatttgaattttcgtccatgaagt 8323115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 12628263 - 12628311
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgt 171  Q
    |||||||| ||| ||||||| || ||||||| |||||||||||||||||    
T  12628263 cttaaataggtccttcgtccatgtaaatataggtcatttgaattttcgt 12628311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 18013678 - 18013722
Alignment:
Q  182 tcctttcaatctgcccctgtaaatactaatcatttgacttttggt 226  Q
    ||||| |||| |||||||| ||||| |||||||||||||||||||    
T  18013678 tccttccaatatgcccctgcaaatattaatcatttgacttttggt 18013722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 41339735 - 41339687
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgt 171  Q
    |||||||||||| ||||| | || ||||||| |||||||||||||||||    
T  41339735 cttaaatatgtcattcgttcttgtaaatataggtcatttgaattttcgt 41339687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 6e-30; HSPs: 78)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 2953465 - 2953579
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||| ||| ||||      ||||||||||||||||||| ||||| |||||||||    
T  2953465 gcttaaatatgtctttcgtccctgtaaatataggtcatttgaattttcgtccctaaagttactaatcctttcaatctgcccctgcaaatattaatcattt 2953564  T
Q  217 gacttttggtcataa 231  Q
    |||||||||||||||    
T  2953565 gacttttggtcataa 2953579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 2953847 - 2953737
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||      ||||| ||||||||||||| ||||| |||||||||    
T  2953847 gcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 2953748  T
Q  217 gacttttggtc 227  Q
    || ||||||||    
T  2953747 gatttttggtc 2953737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 12577395 - 12577285
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||| | ||||||      ||||||||||||||||||| ||||| |||||||||    
T  12577395 gcttaaataggtctttcgtccctgcaaatataagtcatttaaattttcgtccttgaagttactaatcctttcaatctgcccctgcaaatattaatcattt 12577296  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  12577295 gacttttggtc 12577285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 49002879 - 49002987
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttga 218  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||      ||||| ||||||||||||| ||||| |||||||||||    
T  49002879 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 49002978  T
Q  219 cttttggtc 227  Q
    |||||||||    
T  49002979 cttttggtc 49002987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 122 - 231
Target Start/End: Complemental strand, 6056762 - 6056647
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctg-aagt-----gtcctttcaatctgcccctgtaaatactaatcatt 215  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| | |||| ||||      ||||||||||||||||||| ||||| ||||||||    
T  6056762 gcttaaatatgtctttcgtccctgcaaatataagccatttgaattttcatccctgtaagttactaatcctttcaatctgcccctgcaaatattaatcatt 6056663  T
Q  216 tgacttttggtcataa 231  Q
    |||| |||||||||||    
T  6056662 tgacatttggtcataa 6056647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 122 - 224
Target Start/End: Complemental strand, 29043138 - 29043031
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||| ||||||||||| | ||||||||||||||| ||||||||      ||||||||||||||||||| ||||| |||||||||    
T  29043138 gcttaaatatgtctttcgtctctgcaaatataggccatttgaattttcgtccctgaagttactaatcctttcaatctgcccctgcaaatattaatcattt 29043039  T
Q  217 gacttttg 224  Q
    ||||||||    
T  29043038 gacttttg 29043031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 1040299 - 1040409
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||| || ||||||||      ||||| ||||||||||||| ||||| |||||||||    
T  1040299 gcttaaatatgtctttcgtccttgcaaatataagccatttgaatttttgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 1040398  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  1040399 gacttttggtc 1040409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 1047205 - 1047315
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||| || ||||||||      ||||| ||||||||||||| ||||| |||||||||    
T  1047205 gcttaaatatgtctttcgtccttgcaaatataagccatttgaatttttgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 1047304  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  1047305 gacttttggtc 1047315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 33347417 - 33347527
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||      | ||| ||||||||||||  ||||| |||||||||    
T  33347417 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaactttcgtccctgaagttactaattcttccaatctgcccctacaaatattaatcattt 33347516  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  33347517 gacttttggtc 33347527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 46850041 - 46849931
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||      ||||| |||| |||||||| ||||| |||||||||    
T  46850041 gcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactgatccttccaatttgcccctgcaaatattaatcattt 46849942  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  46849941 gacttttggtc 46849931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 46849661 - 46849773
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagtg-----tcctttcaatctgcccctgtaaatactaatcatttga 218  Q
    |||| ||||||| ||||||||| ||||||| ||||||||||||||||| ||||||||      | ||||||||||||||||||||||| || ||||||||    
T  46849661 ttaagtatgtctctcgtccctgtaaatataggtcatttgaattttcgtccctgaagttattaattctttcaatctgcccctgtaaatattagtcatttga 46849760  T
Q  219 cttttggtcataa 231  Q
    |||||||||||||    
T  46849761 cttttggtcataa 46849773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 37152926 - 37152815
Alignment:
Q  117 aaaatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaat 211  Q
    |||||||||||||||||||||||||||||||||||||   |||||||||||||||  |||||||      ||||| ||||||||||||| ||||| ||||    
T  37152926 aaaatgcttaaatatgtctttcgtccctgcaaatatagtccatttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatattaat 37152827  T
Q  212 catttgactttt 223  Q
    ||||||||||||    
T  37152826 catttgactttt 37152815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 46364575 - 46364686
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||      || |||| ||||| ||||  ||||| |||||||||    
T  46364575 gcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatcttttccatctgtccctacaaatattaatcattt 46364674  T
Q  217 gacttttggtca 228  Q
    ||||||||||||    
T  46364675 gacttttggtca 46364686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 1047587 - 1047477
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||||||||||| |||||| ||||||| |||||||||||||||||  |||||||      ||||| ||||||||||||| ||||| |||||||||    
T  1047587 gcttaaatatgtctttcatccctgtaaatataggtcatttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 1047488  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  1047487 gacttttggtc 1047477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 5926524 - 5926630
Alignment:
Q  126 aaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttgact 220  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||      ||||| |||| |||||||| ||| | |||||||||||||    
T  5926524 aaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaacattaatcatttgact 5926623  T
Q  221 tttggtc 227  Q
    |||||||    
T  5926624 tttggtc 5926630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 19755788 - 19755678
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||  | ||||||||      ||||| ||||||||||||| ||||| |||||||||    
T  19755788 gcttaaataggtctttcgtccctgcaaatataggtcatttgaatttttatccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 19755689  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  19755688 gacttttggtc 19755678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 26953102 - 26953212
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagtg-----tcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||||||||||||||| ||||||||||    |||||||||||||| ||||||||      ||||||||||||||||||| ||||| |||||||||    
T  26953102 gcttaaatatgtctttcgtccttgcaaatatagactatttgaattttcgtccctgaagttactaatcctttcaatctgcccctgcaaatattaatcattt 26953201  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  26953202 gacttttggtc 26953212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 25415229 - 25415169
Alignment:
Q  120 atgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  25415229 atgcttaaatatatttttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 25415169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 5183507 - 5183617
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||||||||| | | ||||      ||||| ||||||||||||| ||||| |||||||||    
T  5183507 gcttaaatatgtctttcgttcctgaaaatataggtcatttgaattttcgtccataaagttactaatccttccaatctgcccctgcaaatattaatcattt 5183606  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  5183607 gacttttggtc 5183617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 5183889 - 5183779
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| |||||| ||||||||||||||| | ||||||||||||||| ||||||||      ||||| |||| |||||||| ||||| |||||||||    
T  5183889 gcttaaatacgtcttttgtccctgcaaatataggccatttgaattttcgtccctgaagttacgaatccttccaatttgcccctgcaaatattaatcattt 5183790  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  5183789 gacttttggtc 5183779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 6056377 - 6056487
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| || |      ||||| |||| || ||||| ||||| |||||||||    
T  6056377 gcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctaaaattactgatccttccaatatgtccctgcaaatattaatcattt 6056476  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  6056477 gacttttggtc 6056487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 25414845 - 25414955
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||||||||||||||||| |||||||| | ||||||||||||| |  |||||||      ||||| ||||||||||||| ||||| |||||||||    
T  25414845 gcttaaatatgtctttcgtccctacaaatataggccatttgaattttcttctctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 25414944  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  25414945 gacttttggtc 25414955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 33347799 - 33347689
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||| ||| |||||||||||||||||||||| ||||||||||||||||| | ||||||      ||||| |||||||||| || ||||| |||||||||    
T  33347799 gcttatataggtctttcgtccctgcaaatataggtcatttgaattttcgtccttgaagttactaatccttccaatctgcccttgcaaatattaatcattt 33347700  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  33347699 gacttttggtc 33347689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 127 - 224
Target Start/End: Original strand, 37152544 - 37152646
Alignment:
Q  127 aatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttgactt 221  Q
    |||||||||||||||||| |||||||| ||||||||||||||||| | ||||||      ||||| |||||||||| || ||||||||||||||||||||    
T  37152544 aatatgtctttcgtccctacaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgcccgtgcaaatactaatcatttgactt 37152643  T
Q  222 ttg 224  Q
    |||    
T  37152644 ttg 37152646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 49003258 - 49003148
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||| | ||||||      ||||| ||||||||| ||| ||||| |||||||||    
T  49003258 gcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgcctctgcaaatattaatcattt 49003159  T
Q  217 gacttttggtc 227  Q
    || ||||||||    
T  49003158 gatttttggtc 49003148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 224
Target Start/End: Complemental strand, 739601 - 739494
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||  ||||||| ||||||||||| ||||||||||||||||| | ||||||      ||||||||||||| ||||| ||||| |||||||||    
T  739601 gcttaaatatgattttcgtctctgcaaatataggtcatttgaattttcgtacatgaagttactaatcctttcaatctgtccctgcaaatattaatcattt 739502  T
Q  217 gacttttg 224  Q
    ||||||||    
T  739501 gacttttg 739494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 10019567 - 10019625
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||    
T  10019567 gcttaaataggtatttcgtccctgcaaatataagtcatttgaattttcgtccctgaagt 10019625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 12577011 - 12577117
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||| ||||||| | |||||||||||||||   ||||||      || |||||||||||||||| ||||| |||||||||    
T  12577011 gcttaaatatgtctttcgtccctgtaaatataggccatttgaattttcgtctatgaagttactaatcatttcaatctgcccctgcaaatattaatcattt 12577110  T
Q  217 gactttt 223  Q
    |||||||    
T  12577111 gactttt 12577117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 30830325 - 30830383
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  30830325 gcttaaataagtctttcgtccctgcaaatataagtcatttgaattttcgtccctaaagt 30830383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 227
Target Start/End: Complemental strand, 26953487 - 26953374
Alignment:
Q  119 aatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatca 213  Q
    ||||||||||||| | ||||||||||||||||||||  ||||||||||||| ||||||||||      | ||| |||||||| | || ||||| ||||||    
T  26953487 aatgcttaaatatatatttcgtccctgcaaatataaaccatttgaattttcattcctgaagttactaattcttccaatctgctcttgcaaatattaatca 26953388  T
Q  214 tttgacttttggtc 227  Q
    ||||||||||||||    
T  26953387 tttgacttttggtc 26953374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 29980642 - 29980750
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttga 218  Q
    ||||||||||||||||||| || ||||||| ||||||||||||||||  | ||||||      || || ||||||||||||| ||||| |||||||||||    
T  29980642 ttaaatatgtctttcgtccttgtaaatataggtcatttgaattttcgcccatgaagttactaatctttccaatctgcccctgcaaatattaatcatttga 29980741  T
Q  219 cttttggtc 227  Q
    |||||||||    
T  29980742 cttttggtc 29980750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 34176119 - 34176175
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||    
T  34176119 ttaaataggtctttcgtccctgcaaatataagtcatttgaattttcgtccttgaagt 34176175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 6056567 - 6056508
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  6056567 tgcttaaataagtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagt 6056508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 33347609 - 33347668
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  33347609 tgcttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagt 33347668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 46364768 - 46364827
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  46364768 tgcttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagt 46364827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 739220 - 739330
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| || |||||||||||||||||||   ||||||||||||||| | ||||||      ||||| |||| |||||||| ||||| |||||||||    
T  739220 gcttaaataggtttttcgtccctgcaaatatagaccatttgaattttcgtccttgaagttactaatccttccaatatgcccctgcaaatattaatcattt 739319  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  739320 gacttttggtc 739330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 5926904 - 5926794
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| ||||||||||||||||||||||   ||||||||||||| | ||||||||      ||| | ||||||||| ||| ||||| |||||||||    
T  5926904 gcttaaataggtctttcgtccctgcaaatatagaccatttgaattttcatccctgaagttactaatccgtccaatctgcctctgcaaatagtaatcattt 5926805  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  5926804 gacttttggtc 5926794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 24701464 - 24701522
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||  ||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  24701464 gcttaaatagctctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagt 24701522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 24701652 - 24701594
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| ||||||| |||||||||||||||| ||||||||||||||| ||||||||    
T  24701652 gcttaaataggtctttcatccctgcaaatataagccatttgaattttcgtccctgaagt 24701594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 29981021 - 29980911
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| ||||||||||  |||||||||| ||||||||||||||||| || |||||      ||||| |||| |||||||| ||||| |||||||||    
T  29981021 gcttaaataggtctttcgtctttgcaaatataggtcatttgaattttcgtcccggaagttactaatccttccaatttgcccctgcaaatattaatcattt 29980922  T
Q  217 gacttttggtc 227  Q
    || ||||||||    
T  29980921 gatttttggtc 29980911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 33030335 - 33030393
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| |||||| ||||||||||||||| ||||||||||||||||| ||||||||    
T  33030335 gcttaaataggtcttttgtccctgcaaatataggtcatttgaattttcgtccctgaagt 33030393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 48381066 - 48380956
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| |||||||||||||| |||||||| |||||| ||||||||| | | ||||      ||||| ||||||||| ||| ||||| |||||||||    
T  48381066 gcttaaataagtctttcgtccctgtaaatataattcatttaaattttcgtccttaaagttattaatccttccaatctgccgctgcaaatattaatcattt 48380967  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  48380966 gacttttggtc 48380956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 8890598 - 8890533
Alignment:
Q  116 taaaatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagtg 181  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||||||||| ||||| | |||||||    
T  8890598 taaaaggcttaaataggtctttcgtccctgcaaatataggtcatttgaatattcgtccatgaagtg 8890533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 122 - 226
Target Start/End: Complemental strand, 33030717 - 33030609
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagtg-----tcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| ||||||||| ||||||||||||  |||||||||||||||| | |||| |      ||||||||||||||| ||| ||||| |||||||||    
T  33030717 gcttaaata-gtctttcgttcctgcaaatatagatcatttgaattttcgtccatgaaattactaatcctttcaatctgccactgcaaatattaatcattt 33030619  T
Q  217 gacttttggt 226  Q
    ||||||||||    
T  33030618 gacttttggt 33030609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 224
Target Start/End: Complemental strand, 46364948 - 46364851
Alignment:
Q  132 gtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttgacttttg 224  Q
    |||||||| |||||||||||||||| |||||||||||||| | |||| |      |||||||||| |||||||| ||||| |||||||||||||||||    
T  46364948 gtctttcgcccctgcaaatataagttatttgaattttcgtccttgaaattactaatcctttcaatatgcccctgcaaatattaatcatttgacttttg 46364851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 739409 - 739351
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  739409 tgcttaaataggtctttcatccctgcaa-tataggtcatttgaattttcgttcctgaagt 739351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 2953657 - 2953716
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| ||||| |||||||||||||||||||||||||| | ||||||    
T  2953657 tgcttaaataggtctttcatccctacaaatataagtcatttgaattttcgtccttgaagt 2953716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 12577205 - 12577264
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||| | ||||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  12577205 tgcttaaacaggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagt 12577264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 19755598 - 19755657
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| ||||| |||||||| ||||||||||||||||| ||||||||    
T  19755598 tgcttaaataggtctttcatccctacaaatataggtcatttgaattttcgtccctgaagt 19755657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 29980831 - 29980890
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||| ||| ||||    
T  29980831 tgcttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctaaagt 29980890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 46849851 - 46849910
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| ||| |||||||||| ||||||||||||||||| ||||||||    
T  46849851 tgcttaaataggtctttcatccttgcaaatatatgtcatttgaattttcgtccctgaagt 46849910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 5926719 - 5926773
Alignment:
Q  126 aaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||| || |||| |||||||||||||||||| ||||||||||||||||||||||    
T  5926719 aaataggtatttcatccctgcaaatataagtcgtttgaattttcgttcctgaagt 5926773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 24701271 - 24701329
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| |||||||||| |||||||||||  |||||||||||||||| ||||||||    
T  24701271 gcttaaataagtctttcgtctctgcaaatatagctcatttgaattttcgtccctgaagt 24701329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 37152732 - 37152790
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| ||||||| ||| |||||||||||||||||||||||||||| | ||||||    
T  37152732 gcttaaataggtctttcatccatgcaaatataagtcatttgaattttcgtccttgaagt 37152790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 33030523 - 33030466
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||| || |||||||||||||||||||  ||||||||||||||||| |||||||    
T  33030523 cttaaataggtttttcgtccctgcaaatatagatcatttgaattttcgtttctgaagt 33030466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 49003070 - 49003127
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||| ||||||| |||||||||||||| ||||||||||||| ||| ||||||||    
T  49003070 cttaaataagtctttcatccctgcaaatataggtcatttgaatttccgtccctgaagt 49003127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 26953297 - 26953353
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||| ||||||| |||||||||||||| |||||||||||||||||  |||||||    
T  26953297 ttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtctctgaagt 26953353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 5183699 - 5183758
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| ||||| |||||||| ||||||||||||||||| | ||||||    
T  5183699 tgcttaaataggtctttcatccctacaaatataggtcatttgaattttcgtccatgaagt 5183758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 25415037 - 25415096
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| ||| |||||||||| |||||||||||||||||  |||||||    
T  25415037 tgcttaaataggtctttcatccatgcaaatataggtcatttgaattttcgtctctgaagt 25415096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 29042946 - 29042887
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| ||| |||||||||| ||||||||||||||| | ||||||||    
T  29042946 tgcttaaataggtctttcatccttgcaaatataggtcatttgaattttcatccctgaagt 29042887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 8890213 - 8890322
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| || ||||||||||||||||||| ||||||||||| || || ||||||||      || || ||||||||| ||  ||||| |||||||||    
T  8890213 gcttaaataggtatttcgtccctgcaaatataggtcatttgaatatt-gtccctgaagttactaatctttccaatctgccactccaaatattaatcattt 8890311  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  8890312 gacttttggtc 8890322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 48380682 - 48380740
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| ||||||||||| || ||||||| |||||||||||||||||  |||||||    
T  48380682 gcttaaataggtctttcgtccttgtaaatataggtcatttgaattttcgtcgctgaagt 48380740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 49990179 - 49990069
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||||||||||||||||||||||||||    ||||||||||||||   ||||||      |||||  ||||| |||||  ||||| |||||||||    
T  49990179 gcttaaatatgtctttcgtccctgcaaatatagactatttgaattttcgtctttgaagttattaatccttcaaatctacccctacaaatattaatcattt 49990080  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  49990079 gacttttggtc 49990069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 231
Target Start/End: Original strand, 29042750 - 29042870
Alignment:
Q  115 ataaaatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagtg-----tcctttcaatctgcccctgtaaatacta 209  Q
    |||||| | |||||||||||||||||||| | ||||||| | ||||||| |||||||  | |||||      ||||| ||||||| ||||| ||||| ||    
T  29042750 ataaaaggtttaaatatgtctttcgtccc-gtaaatataggccatttgatttttcgtcgcggaagttattaatccttccaatctgtccctgcaaatatta 29042848  T
Q  210 atcatttgacttttggtcataa 231  Q
    ||||||||| ||||||||||||    
T  29042849 atcatttgatttttggtcataa 29042870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 46544925 - 46544974
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgt 171  Q
    |||||||||  ||||||||||||||||||||| || ||||||||||||||    
T  46544925 gcttaaatagatctttcgtccctgcaaatatatgttatttgaattttcgt 46544974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 49989861 - 49989906
Alignment:
Q  182 tcctttcaatctgcccctgtaaatactaatcatttgacttttggtc 227  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||||    
T  49989861 tcctttcaatctgcctctgcaaatattaatcatttgacttttggtc 49989906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 51933968 - 51934017
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgt 171  Q
    ||||||| | |||||||||||||| ||||||| |||||||||||||||||    
T  51933968 gcttaaacaggtctttcgtccctggaaatatatgtcatttgaattttcgt 51934017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 35311977 - 35312033
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||| |||||||||||||  ||||||| |||||||||||||||||  |||||||    
T  35311977 ttaaataggtctttcgtccctataaatataggtcatttgaattttcgtcactgaagt 35312033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 231
Target Start/End: Original strand, 51933837 - 51933884
Alignment:
Q  184 ctttcaatctgcccctgtaaatactaatcatttgacttttggtcataa 231  Q
    |||| |||||||| ||||||||| |||||||||| |||||||||||||    
T  51933837 cttttaatctgccactgtaaatattaatcatttgtcttttggtcataa 51933884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 52454949 - 52454996
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttc 169  Q
    ||||||||| || ||||||||||||||| ||| |||||||||||||||    
T  52454949 gcttaaataggtatttcgtccctgcaaaaataggtcatttgaattttc 52454996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 6334657 - 6334707
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgtt 172  Q
    ||||||||| ||||||| ||||||||||||||   ||||||||||||||||    
T  6334657 gcttaaataagtctttcatccctgcaaatatagaccatttgaattttcgtt 6334707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 8890403 - 8890461
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| || |||| ||||| |||||||| ||||||||||||||||| | ||||||    
T  8890403 gcttaaataggtatttcttcccttcaaatataggtcatttgaattttcgtccatgaagt 8890461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 30830512 - 30830462
Alignment:
Q  122 gcttaaatatgtctttc-gtccctgcaaatataagtcatttgaattttcgt 171  Q
    ||||||||| ||||||  |||| ||||||||||||||||||||||||||||    
T  30830512 gcttaaataggtctttttgtccttgcaaatataagtcatttgaattttcgt 30830462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 172
Target Start/End: Complemental strand, 51934141 - 51934099
Alignment:
Q  130 atgtctttcgtccctgcaaatataagtcatttgaattttcgtt 172  Q
    ||||| ||| |||||||||||||||| ||||||||||||||||    
T  51934141 atgtcattcatccctgcaaatataagccatttgaattttcgtt 51934099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 1040475 - 1040430
Alignment:
Q  135 tttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||| ||||| |||||||| ||||||||||||||||| ||||||||    
T  1040475 tttcatccctacaaatataggtcatttgaattttcgtccctgaagt 1040430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 1047381 - 1047336
Alignment:
Q  135 tttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||| ||||| |||||||| ||||||||||||||||| ||||||||    
T  1047381 tttcatccctacaaatataggtcatttgaattttcgtccctgaagt 1047336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 46544761 - 46544810
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgt 171  Q
    ||||||||| |||||||||   |||||||||| |||||||||||||||||    
T  46544761 gcttaaataagtctttcgttattgcaaatataggtcatttgaattttcgt 46544810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 35312172 - 35312216
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaatttt 168  Q
    ||||||| ||||||||||||||||||||||   ||||||||||||    
T  35312172 ttaaataggtctttcgtccctgcaaatatagaccatttgaatttt 35312216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 4e-28; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 107 - 224
Target Start/End: Complemental strand, 54961830 - 54961707
Alignment:
Q  107 agttaaatataaaatg-cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctg 200  Q
    |||||| | ||||||| ||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||      ||||||||||||||||| |    
T  54961830 agttaattttaaaatgacttaaatatgtctttcgtccctgcaaatataggtcatttgaattttagtccctgaagttactaatcctttcaatctgcccccg 54961731  T
Q  201 taaatactaatcatttgacttttg 224  Q
    |||||| |||||||||||||||||    
T  54961730 taaatattaatcatttgacttttg 54961707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 227
Target Start/End: Original strand, 22249729 - 22249844
Alignment:
Q  117 aaaatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaat 211  Q
    |||| |||||||||||| |||||||||||||||||||  |||||||||||||||| | ||||||      ||||||||||||||||||| ||||| ||||    
T  22249729 aaaaggcttaaatatgtttttcgtccctgcaaatatagatcatttgaattttcgtccatgaagttactaatcctttcaatctgcccctgcaaatattaat 22249828  T
Q  212 catttgacttttggtc 227  Q
    ||||||||||||||||    
T  22249829 catttgacttttggtc 22249844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 227
Target Start/End: Complemental strand, 53559775 - 53559660
Alignment:
Q  117 aaaatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaat 211  Q
    |||| |||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||      || || ||||||||||||| ||||| ||||    
T  53559775 aaaaggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcgttccaatctgcccctgcaaatattaat 53559676  T
Q  212 catttgacttttggtc 227  Q
    ||||||||||||||||    
T  53559675 catttgacttttggtc 53559660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 115 - 227
Target Start/End: Complemental strand, 12691795 - 12691678
Alignment:
Q  115 ataaaatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatacta 209  Q
    |||||| | |||||||||||||||||||||||||||||| |||||||||||||| || ||||||||      ||||| ||||| ||||||| ||||| ||    
T  12691795 ataaaagggttaaatatgtctttcgtccctgcaaatataggtcatttgaatttttgtccctgaagttactaatccttccaatccgcccctgcaaatatta 12691696  T
Q  210 atcatttgacttttggtc 227  Q
    ||||||||||||||||||    
T  12691695 atcatttgacttttggtc 12691678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 13872070 - 13872180
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||| | ||||||      ||||| |||| ||||| || |||||||||||||||    
T  13872070 gcttaaatatgtctttcgtccctgcaaatataggttatttgaattttcgtccatgaagttattaatccttccaatatgcccttgcaaatactaatcattt 13872169  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  13872170 gacttttggtc 13872180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 47862153 - 47862259
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| ||||||| |||||||||||||| |||||||||||||||||  |||||||      ||||| ||||||||||||| |||||||||||||||    
T  47862153 gcttaaataggtctttcatccctgcaaatatatgtcatttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatactaatcattt 47862252  T
Q  217 gactttt 223  Q
    |||||||    
T  47862253 gactttt 47862259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 116 - 231
Target Start/End: Original strand, 54961426 - 54961546
Alignment:
Q  116 taaaatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaa 210  Q
    ||||| ||||||||| ||||||||||||||||||||||   ||||||||||||||| ||||||||      ||||| |||| |||||||| ||||| |||    
T  54961426 taaaaggcttaaataggtctttcgtccctgcaaatatagaccatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaa 54961525  T
Q  211 tcatttgacttttggtcataa 231  Q
    |||||||||||||| ||||||    
T  54961526 tcatttgacttttgatcataa 54961546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 20086438 - 20086544
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||| ||  ||||||| ||||||||||||||||| ||||||||      ||||| ||||||||||||| ||||| |||||||||    
T  20086438 gcttaaatatgtctttcgtctctataaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 20086537  T
Q  217 gactttt 223  Q
    |||||||    
T  20086538 gactttt 20086544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 19916663 - 19916767
Alignment:
Q  128 atatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttgacttt 222  Q
    |||||||||||||||||||||||||| ||||||| ||||||||  ||||||||      ||||| ||||||||| ||| ||||| |||||||||||||||    
T  19916663 atatgtctttcgtccctgcaaatataggtcatttaaattttcgcccctgaagttactaatccttccaatctgccactgcaaatattaatcatttgacttt 19916762  T
Q  223 tggtc 227  Q
    |||||    
T  19916763 tggtc 19916767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 13872452 - 13872342
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtc-atttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatt 215  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||| || ||||||||      | ||| ||||||||||||| ||||| ||||||||    
T  13872452 gcttaaatatgtctttcgtccctgcaaatat-agtctatttgaatttttgtccctgaagttactaattcttccaatctgcccctgcaaatattaatcatt 13872354  T
Q  216 tgacttttggtc 227  Q
    ||||||||||||    
T  13872353 tgacttttggtc 13872342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 218
Target Start/End: Complemental strand, 37678233 - 37678130
Alignment:
Q  120 atgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcat 214  Q
    ||||||||||| |||||||||||||||||||||||| ||||| ||||||||| ||||||||      ||||| ||||||||| ||| ||||| |||||||    
T  37678233 atgcttaaataggtctttcgtccctgcaaatataagccatttaaattttcgtccctgaagttactaatccttccaatctgccactgcaaatattaatcat 37678134  T
Q  215 ttga 218  Q
    ||||    
T  37678133 ttga 37678130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 8287316 - 8287206
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| |||||||||||||||||||||| | ||||||||||||||| ||||||||      ||||| ||||||||| ||| |||   |||||||||    
T  8287316 gcttaaataggtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaaatttaatcattt 8287217  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  8287216 gacttttggtc 8287206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 12691407 - 12691517
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| ||||||||||| |||||||||| | ||||||||||||||| ||||||||      ||||| ||||||| ||||  ||||| |||||||||    
T  12691407 gcttaaataggtctttcgtccatgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgtccctacaaatattaatcattt 12691506  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  12691507 gacttttggtc 12691517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 22250116 - 22250010
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||| |||||| |      | ||| |||| |||||||| ||||| |||||||||    
T  22250116 gcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcattt 22250017  T
Q  217 gactttt 223  Q
    |||||||    
T  22250016 gactttt 22250010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 33294526 - 33294416
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||||||||||| |||||||||||||| |  |||||||||||||| ||||||||      ||||| | ||||||||||| ||||| |||||||||    
T  33294526 gcttaaatatgtctttcctccctgcaaatataggcaatttgaattttcgtccctgaagttactaatccttccgatctgcccctgcaaatattaatcattt 33294427  T
Q  217 gacttttggtc 227  Q
    || ||||||||    
T  33294426 gatttttggtc 33294416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 35730663 - 35730721
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||    
T  35730663 gcttaaataggtctttcgtccctgcaaatataagtcatttgaattttcgtctctgaagt 35730721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 37677849 - 37677963
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||      ||||| | ||||||| ||| |||   |||||||||    
T  37677849 gcttaaataggtctttcttccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccgatctgccactgcaaaatttaatcattt 37677948  T
Q  217 gacttttggtcataa 231  Q
    |||||||||||||||    
T  37677949 gacttttggtcataa 37677963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 37678042 - 37678100
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  37678042 gcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagt 37678100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 47982019 - 47981909
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||||||||||||||||||||||||||    ||||||||||||||  |||||||      ||||| ||||||||||||| ||||| |||||||||    
T  47982019 gcttaaatatgtctttcgtccctgcaaatatagactatttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 47981920  T
Q  217 gacttttggtc 227  Q
    || ||||||||    
T  47981919 gatttttggtc 47981909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 48507603 - 48507546
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  48507603 cttaaatagatctttcgtccctgcaaatataagtcatttgaattttcgtccctgaagt 48507546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 12691597 - 12691538
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  12691597 tgcttaaataagtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagt 12691538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 33294335 - 33294276
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||| || |||||    
T  33294335 tgcttaaatatgtctttcatccctgcaaatataggtcatttgaattttcgtcccggaagt 33294276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 34238474 - 34238585
Alignment:
Q  125 taaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagtg-----tcctttcaatctgcccctgtaaatactaatcatttgac 219  Q
    |||||| ||||||||||| || ||||||| |  ||||||||||||||  |||||||      |||||||||| |||||||| ||||| ||||||||||||    
T  34238474 taaataggtctttcgtccttgtaaatataggctatttgaattttcgtctctgaagttactaatcctttcaatatgcccctgcaaatattaatcatttgac 34238573  T
Q  220 ttttggtcataa 231  Q
    ||||||||||||    
T  34238574 ttttggtcataa 34238585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 47862343 - 47862284
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  47862343 tgcttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagt 47862284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 8286933 - 8286991
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||  |||||||    
T  8286933 gcttaaataggtctttcgtccctgcaaatataagccatttgaattttcgtctctgaagt 8286991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 8287122 - 8287064
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| ||||||||| |||||||||||| ||||||||||||||||| ||||||||    
T  8287122 gcttaaataggtctttcgttcctgcaaatataggtcatttgaattttcgtccctgaagt 8287064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 19740861 - 19740919
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| ||||||||||| |||||||||| ||||||||||||||||| ||||||||    
T  19740861 gcttaaataggtctttcgtccttgcaaatatatgtcatttgaattttcgtccctgaagt 19740919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 224
Target Start/End: Original strand, 47980687 - 47980793
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttg 217  Q
    |||||||| ||||||||||||||||||||||   ||||||||||||||| ||||||||      ||||| ||||||  ||||| ||||| ||||||||||    
T  47980687 cttaaataggtctttcgtccctgcaaatatagaccatttgaattttcgtccctgaagttactgatccttccaatctatccctgcaaatattaatcatttg 47980786  T
Q  218 acttttg 224  Q
    |||||||    
T  47980787 acttttg 47980793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 27813238 - 27813181
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaag 179  Q
    ||||||||| ||||||||||||||||||||||  |||||||||||||||| |||||||    
T  27813238 gcttaaataggtctttcgtccctgcaaatatagatcatttgaattttcgtccctgaag 27813181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 35731034 - 35730986
Alignment:
Q  132 gtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  35731034 gtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagt 35730986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 20086630 - 20086689
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| |||||||||||||| ||| ||||||||||||| ||||||||    
T  20086630 tgcttaaataggtctttcatccctgcaaatataggtcctttgaattttcgtccctgaagt 20086689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 22249926 - 22249985
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||| | ||||||||    
T  22249926 tgcttaaataagtctttcatccctgcaaatataggtcatttgaattttcatccctgaagt 22249985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 26601269 - 26601328
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| ||||| ||||||||||||||||||||||||||  |||||||    
T  26601269 tgcttaaataggtctttcatccctacaaatataagtcatttgaattttcgtctctgaagt 26601328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 32846358 - 32846421
Alignment:
Q  117 aaaatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||| ||||||||| ||||||||| | |||||||||| | ||||||||||||||||||||||||    
T  32846358 aaaaagcttaaataggtctttcgtgcttgcaaatataggccatttgaattttcgttcctgaagt 32846421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 53559578 - 53559519
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||| ||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  53559578 tgcttacataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagt 53559519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 33294145 - 33294259
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagtg-----tcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||| ||| |||| |||||||||| || ||||||||||| || | ||||||      ||||| |||| |||||||| ||||| |||||||||    
T  33294145 gcttaaatatgttttttgtccatgcaaatataggttatttgaatttttgtccatgaagttactaatccttccaatttgcccctgcaaatattaatcattt 33294244  T
Q  217 gacttttggtcataa 231  Q
     ||||||||||||||    
T  33294245 aacttttggtcataa 33294259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 47862534 - 47862425
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||||||||||||| |||| ||||||| | ||||||||||||||| | ||||||      |||||  ||| |||||||| ||||| |||||||||    
T  47862534 gcttaaatatgtctttcgt-cctgtaaatataggccatttgaattttcgtccatgaagttactaatccttctaatttgcccctgcaaatattaatcattt 47862436  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  47862435 gacttttggtc 47862425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 27813051 - 27813096
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaatttt 168  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||    
T  27813051 cttaaataagtcttttgtccctgcaaatataagtcatttgaatttt 27813096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 37732299 - 37732348
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgtt 172  Q
    |||||||| ||||||| |||||||||||||| ||||||||||||||||||    
T  37732299 cttaaataggtctttcatccctgcaaatatatgtcatttgaattttcgtt 37732348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 180
Target Start/End: Complemental strand, 48507807 - 48507742
Alignment:
Q  115 ataaaatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||| | ||||||| ||||||||||||| |||||||| |||||||||||||||||  |||||||    
T  48507807 ataaaaggtttaaataggtctttcgtccctacaaatataggtcatttgaattttcgtctctgaagt 48507742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 50246051 - 50246100
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgt 171  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||||||    
T  50246051 gcttaaataggtctttcgtccctgtaattataagtcatttgaattttcgt 50246100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 34238661 - 34238602
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| || |||| ||||||||||| || ||||||||||||||||| ||||||||    
T  34238661 tgcttaaataggtttttcatccctgcaaatttaggtcatttgaattttcgtccctgaagt 34238602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 47980876 - 47980817
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| |||||||||||| | ||||||||||||||||| | ||||||    
T  47980876 tgcttaaataggtctttcatccctgcaaatacaggtcatttgaattttcgtccatgaagt 47980817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 20601137 - 20601079
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||||||||||||||| || || |||| |||||| |||||||||| ||||||||    
T  20601137 gcttaaatatgtctttcgtccttgtaattataggtcattcgaattttcgtccctgaagt 20601079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 35730855 - 35730913
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||  |||||||||| |||||||||| ||||||||||||||||| | ||||||    
T  35730855 gcttaaatagttctttcgtccatgcaaatataggtcatttgaattttcgtccttgaagt 35730913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 37732462 - 37732404
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| || || |||||||| ||||||| || |||||||||||||||||||||||    
T  37732462 gcttaaataggttttacgtccctgtaaatataggttatttgaattttcgttcctgaagt 37732404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 50246241 - 50246183
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||  |||||| |||||||||||||| ||||||||||||||||| | ||||||    
T  50246241 gcttaaatagatctttcatccctgcaaatataggtcatttgaattttcgtccatgaagt 50246183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 167
Target Start/End: Original strand, 489377 - 489422
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattt 167  Q
    ||||||||| |||||||||||||||||||||| ||| |||||||||    
T  489377 gcttaaataggtctttcgtccctgcaaatataggtcgtttgaattt 489422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 167
Target Start/End: Original strand, 515169 - 515214
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattt 167  Q
    ||||||||| |||||||||||||||||||||| ||| |||||||||    
T  515169 gcttaaataggtctttcgtccctgcaaatataggtcgtttgaattt 515214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 19917039 - 19916990
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgt 171  Q
    ||||||||| || ||||||||||||||||||| ||||||| |||||||||    
T  19917039 gcttaaataggtttttcgtccctgcaaatataggtcatttaaattttcgt 19916990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 53559453 - 53559498
Alignment:
Q  182 tcctttcaatctgcccctgtaaatactaatcatttgacttttggtc 227  Q
    ||||| ||||||||||||| ||||| ||||||||||||||||||||    
T  53559453 tccttccaatctgcccctgcaaatattaatcatttgacttttggtc 53559498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 13872265 - 13872309
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaatttt 168  Q
    ||||||| ||||||| |||||||||||||| ||||||||||||||    
T  13872265 ttaaataggtctttcatccctgcaaatatatgtcatttgaatttt 13872309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 19916850 - 19916906
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaa 178  Q
    ||||||||| ||||||||| || |||| |||||||||| ||||||||||| ||||||    
T  19916850 gcttaaataggtctttcgttccagcaattataagtcatatgaattttcgtccctgaa 19916906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 20600958 - 20600998
Alignment:
Q  132 gtctttcgtccctgcaaatataagtcatttgaattttcgtt 172  Q
    ||||||||||||| |||||||| ||||||||||||||||||    
T  20600958 gtctttcgtcccttcaaatataggtcatttgaattttcgtt 20600998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 223
Target Start/End: Original strand, 50245860 - 50245964
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttga 218  Q
    |||||||  ||||||||||||| ||||||| ||||||||||||||| | | ||||||      || || ||||||||| ||| ||||| |||||||||||    
T  50245860 ttaaatagatctttcgtccctgtaaatataggtcatttgaattttcatccatgaagttactaatcattccaatctgccactgcaaatattaatcatttga 50245959  T
Q  219 ctttt 223  Q
    |||||    
T  50245960 ctttt 50245964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 13336937 - 13336881
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaa 178  Q
    |||||||||||  |||| |||||||||||||| |||||||||| |||| | ||||||    
T  13336937 gcttaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaa 13336881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 45199138 - 45199186
Alignment:
Q  132 gtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||||| |||||||||| |||| |||||||||||  |||||||    
T  45199138 gtctttcgtccccgcaaatataaatcatctgaattttcgtctctgaagt 45199186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 43938277 - 43938167
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||      ||||| ||||||||||||| ||||| |||||||||    
T  43938277 gcttaaatatgtctttcgtccttgcaaatataagccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 43938178  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  43938177 gacttttggtc 43938167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 26826019 - 26825899
Alignment:
Q  116 taaaatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaa 210  Q
    ||||| ||||||||| ||||||||| |||||||||||| ||||||||||||||||| | ||||||      ||||||||||||||||||| ||||| |||    
T  26826019 taaaaggcttaaataggtctttcgttcctgcaaatatatgtcatttgaattttcgtccatgaagttattaatcctttcaatctgcccctgcaaatattaa 26825920  T
Q  211 tcatttgacttttggtcataa 231  Q
    |||||||||||||||| ||||    
T  26825919 tcatttgacttttggttataa 26825899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 12929637 - 12929527
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagtg-----tcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| ||| |||||||||     ||||| |||||||||| || ||||| |||||||||    
T  12929637 gcttaaatatgtctttcgtccctgcaaatattggtcatttgaatttccgtccctgaagtgactaatccttccaatctgcccgtgcaaatattaatcattt 12929538  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  12929537 gacttttggtc 12929527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 43937895 - 43938009
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||||||||||||||| || ||||||| ||||||||||||||| | ||||||||      ||||| ||||||||||||| ||||| |||||||||    
T  43937895 gcttaaatatgtctttcgtccttgtaaatataggtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 43937994  T
Q  217 gacttttggtcataa 231  Q
    |||||||||||||||    
T  43937995 gacttttggtcataa 43938009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 117 - 227
Target Start/End: Original strand, 26825626 - 26825741
Alignment:
Q  117 aaaatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaat 211  Q
    |||| |||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||      || || ||||||||||||| ||| | ||||    
T  26825626 aaaaggcttaaatatgtctttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatcattccaatctgcccctgcaaagattaat 26825725  T
Q  212 catttgacttttggtc 227  Q
    ||||||||||||||||    
T  26825726 catttgacttttggtc 26825741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 12931115 - 12931011
Alignment:
Q  128 atatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttgacttt 222  Q
    |||||||||||||||||||||||||  ||||||||||||||||| ||||||||      ||||| |||||||||| || ||||| |||||||||||||||    
T  12931115 atatgtctttcgtccctgcaaatattggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccatgcaaatattaatcatttgacttt 12931016  T
Q  223 tggtc 227  Q
    |||||    
T  12931015 tggtc 12931011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 115 - 226
Target Start/End: Complemental strand, 34454870 - 34454754
Alignment:
Q  115 ataaaatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatacta 209  Q
    |||||| ||||||||| | ||||| ||||||||||||||  |||||||||||||||| ||||||||      | ||||||||||||||||| ||||| ||    
T  34454870 ataaaaggcttaaataggactttcatccctgcaaatatagatcatttgaattttcgtccctgaagttactaattctttcaatctgcccctgcaaatatta 34454771  T
Q  210 atcatttgacttttggt 226  Q
    |||||||||||||||||    
T  34454770 atcatttgacttttggt 34454754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 37563355 - 37563465
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||| ||||||||||||||| | ||||||||||||||| |||||| |      |||||  |||||||||||| ||||| |||||||||    
T  37563355 gcttaaatatgtcttttgtccctgcaaatataggccatttgaattttcgtccctgaatttactaatccttctaatctgcccctgcaaatattaatcattt 37563454  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  37563455 gacttttggtc 37563465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 37563737 - 37563627
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||| ||||||| | ||||||||||||||| ||||||||      ||||| |||| |||||||| ||||| ||||| |||    
T  37563737 gcttaaatatgtctttcgtccctgtaaatataggccatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatctttt 37563638  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  37563637 gacttttggtc 37563627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 34454485 - 34454592
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||   ||||||      ||||| |||||| |||||| ||||| |||||||||    
T  34454485 gcttaaatatgtccttcgtccctgcaaatataggtcatttgaattttcgtctttgaagttactaatccttccaatctacccctgcaaatattaatcattt 34454584  T
Q  217 gacttttg 224  Q
    ||||||||    
T  34454585 gacttttg 34454592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 5280273 - 5280383
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| |||||||||||||||||||||| | |||||||||||||||| |||||||      ||||| ||||||||| ||||||||| |||| ||||    
T  5280273 gcttaaataagtctttcgtccctgcaaatataggccatttgaattttcgttactgaagttactaatccttccaatctgccactgtaaatattaataattt 5280372  T
Q  217 gacttttggtc 227  Q
    || ||| ||||    
T  5280373 gaatttcggtc 5280383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 15827915 - 15827973
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  15827915 gcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagt 15827973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 47081848 - 47081958
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||||||| |  |||||||      |||||||||||||||  |||||||| |||||||||    
T  47081848 gcttaaataggtctttcgtcccttcaaatatatgtcatttgaattttcatctctgaagttactaatcctttcaatctgccattgtaaatattaatcattt 47081947  T
Q  217 gacttttggtc 227  Q
    || ||||||||    
T  47081948 gatttttggtc 47081958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 34454673 - 34454732
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  34454673 tgcttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagt 34454732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 7159311 - 7159253
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||||||| ||| ||||||||||||||  |||||||||||||||||||||||||    
T  7159311 gcttaaatatgtcattcatccctgcaaatatagatcatttgaattttcgttcctgaagt 7159253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 27558038 - 27557980
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  27558038 gcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccttgaagt 27557980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 12928234 - 12928291
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||||    
T  12928234 cttaaataggtctttcacccctgcaaatataagtcatttgaattttcgtccctgaagt 12928291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 27558235 - 27558186
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgt 171  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  27558235 gcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgt 27558186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 44545597 - 44545654
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||||    
T  44545597 cttaaataggtcttttgtctctgcaaatataggtcatttgaattttcgttcctgaagt 44545654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 5636406 - 5636350
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||||| ||||||||    
T  5636406 ttaaataggtctttcgtccttgcaaatataagtaatttgaattttcgtccctgaagt 5636350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 44545976 - 44545920
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||||||| ||||||||    
T  44545976 ttaaataggtctttcgtccatgcaaatacaagtcatttgaattttcgtccctgaagt 44545920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 47082043 - 47082099
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||| ||||||||||||||||||||||  |||||||||||||||| ||||||||    
T  47082043 ttaaataagtctttcgtccctgcaaatatagttcatttgaattttcgtccctgaagt 47082099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 26825823 - 26825882
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| || |||| |||||||||||||| ||||||||||||||||| ||||||||    
T  26825823 tgcttaaataggtatttcatccctgcaaatataggtcatttgaattttcgtccctgaagt 26825882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 37563547 - 37563606
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| |||||||||||||| | ||||||||||||||| ||||||||    
T  37563547 tgcttaaataagtctttcatccctgcaaatatagggcatttgaattttcgtccctgaagt 37563606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 5280654 - 5280596
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| |||||| |||| |||||||||| ||||||||||||||||| ||||||||    
T  5280654 gcttaaataggtcttttgtccttgcaaatataggtcatttgaattttcgtccctgaagt 5280596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 47121467 - 47121409
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| | ||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  47121467 gcttaaataggcctttcatccctgcaaatataggtcatttgaattttcgtccctgaagt 47121409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 5636202 - 5636157
Alignment:
Q  135 tttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||    
T  5636202 tttcgtcccttcaaatataagtcatttgaattttcgtccctgaagt 5636157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 12928031 - 12928096
Alignment:
Q  115 ataaaatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||| |||||||||||||||||||| ||||||||||| | || |||||||||||| ||| ||||    
T  12928031 ataaaaggcttaaatatgtctttcgtcgctgcaaatataggccacttgaattttcgtccctaaagt 12928096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 226
Target Start/End: Complemental strand, 12928422 - 12928313
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| |||||| |||||||||||||||   ||||||||||||||| | ||||||      |||||| |||||||| ||| |||||  ||||||||    
T  12928422 gcttaaataggtcttttgtccctgcaaatatagaccatttgaattttcgtccttgaagttactaatccttttaatctgccgctgcaaatatcaatcattt 12928323  T
Q  217 gacttttggt 226  Q
    ||||||||||    
T  12928322 gacttttggt 12928313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 12929449 - 12929506
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||| ||||||| |||||||||||||| ||||||||||||||||| | ||||||    
T  12929449 cttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccatgaagt 12929506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 20947196 - 20947252
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||| ||||||||||||| |||||||| ||||||||||||||||| | ||||||    
T  20947196 ttaaataggtctttcgtcccttcaaatataggtcatttgaattttcgtccatgaagt 20947252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 231
Target Start/End: Original strand, 35262610 - 35262741
Alignment:
Q  105 aaagttaaatataaaatgcttaaatatgtctttcgtccctgc-aaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccc 198  Q
    ||||||| ||| |||||| ||||||| ||||||||||||||| |||||| ||||||||||||||| ||  |||||||      ||||| ||||||||| |    
T  35262610 aaagttatataaaaaatgtttaaataggtctttcgtccctgcaaaatat-agtcatttgaatttttgtctctgaagttactaatccttccaatctgccac 35262708  T
Q  199 tgtaaatactaatcatttgacttttggtcataa 231  Q
    || |||   ||||||||||||||||| ||||||    
T  35262709 tgcaaaatttaatcatttgacttttgatcataa 35262741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 168
Target Start/End: Complemental strand, 25049545 - 25049498
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaatttt 168  Q
    |||||||||| |||||||||||||| ||||||| ||||||||||||||    
T  25049545 tgcttaaataggtctttcgtccctgtaaatataggtcatttgaatttt 25049498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 173
Target Start/End: Original strand, 44545789 - 44545840
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttc 173  Q
    ||||||||| ||||||||| | |||||||||| |||||||||||||||||||    
T  44545789 gcttaaataggtctttcgttcttgcaaatataggtcatttgaattttcgttc 44545840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 231
Target Start/End: Complemental strand, 20947577 - 20947463
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||| || | ||||||||||||| |||||||||||| |   ||||||      ||||| |||||| || ||||||||| |||||||||    
T  20947577 gcttaaatatgtcttttgtgcttgcaaatataagttatttgaattttcatctatgaagttactaatccttccaatctaccactgtaaatattaatcattt 20947478  T
Q  217 gacttttggtcataa 231  Q
     ||||||| ||||||    
T  20947477 aacttttgatcataa 20947463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 12930933 - 12930990
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||| || |||| |||||||||||||| ||||||||||||||||| | ||||||    
T  12930933 cttaaataggtgtttcatccctgcaaatataggtcatttgaattttcgtccatgaagt 12930990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 35262832 - 35262877
Alignment:
Q  135 tttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||||||||||||||  |||||||||||| ||||||||||    
T  35262832 tttcgtccctgcaaatataagcaatttgaattttctttcctgaagt 35262877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 5636041 - 5636085
Alignment:
Q  136 ttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||||||||||| ||||||||||||||||| ||| ||||    
T  5636041 ttcgtccctgcaaatataggtcatttgaattttcgtccctaaagt 5636085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 19980274 - 19980230
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaatttt 168  Q
    ||||||| ||||||| || ||||||||||||||||||||||||||    
T  19980274 ttaaataggtctttcatcactgcaaatataagtcatttgaatttt 19980230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 27557859 - 27557907
Alignment:
Q  132 gtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||||||| ||||||| ||||||||||||||||| | ||||||    
T  27557859 gtctttcgtccctgtaaatataggtcatttgaattttcgtccttgaagt 27557907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 169
Target Start/End: Complemental strand, 15828093 - 15828058
Alignment:
Q  134 ctttcgtccctgcaaatataagtcatttgaattttc 169  Q
    |||||||| |||||||||||||||||||||||||||    
T  15828093 ctttcgtctctgcaaatataagtcatttgaattttc 15828058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 43938087 - 43938146
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||||  | |||| ||||| |||||||| ||||||||||||||||| ||||||||    
T  43938087 tgcttaaatagatatttcatccctacaaatataggtcatttgaattttcgtccctgaagt 43938146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 47121662 - 47121603
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| |||||||||||||||||||||    |||||||||||||||  |||||||    
T  47121662 tgcttaaataggtctttcgtccctgcaaatattgaccatttgaattttcgtctctgaagt 47121603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 19980140 - 19980082
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| ||||||||||| | ||||||||  |||||||||||||||| | ||||||    
T  19980140 gcttaaataggtctttcgtccttccaaatatagatcatttgaattttcgtccttgaagt 19980082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 20947370 - 20947325
Alignment:
Q  135 tttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| |||||||| ||||||||||||||||| | ||||||    
T  20947370 tttcgtcccttcaaatataggtcatttgaattttcgtccttgaagt 20947325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 15827787 - 15827831
Alignment:
Q  182 tcctttcaatctgcccctgtaaatactaatcatttgacttttggt 226  Q
    ||||||||||||||| ||| ||||| ||| |||||||||||||||    
T  15827787 tcctttcaatctgccactgcaaatattaaccatttgacttttggt 15827831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 45586576 - 45586623
Alignment:
Q  132 gtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||| ||||||||||||| ||||||||||||||||| | ||||||    
T  45586576 gtctttcg-ccctgcaaatataggtcatttgaattttcgtccttgaagt 45586623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 13480209 - 13480319
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||      ||||| ||||||||||||| ||||| |||||||||    
T  13480209 gcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 13480308  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  13480309 gacttttggtc 13480319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 15819873 - 15819763
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||      ||||| |||||| ||| || |||||||||||||||    
T  15819873 gcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctacccttgcaaatactaatcattt 15819774  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  15819773 gacttttggtc 15819763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 20560929 - 20561039
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||      || |||||||||||||||| ||||| |||||||||    
T  20560929 gcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgtagttattaatcatttcaatctgcccctgcaaatattaatcattt 20561028  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  20561029 gacttttggtc 20561039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 122 - 226
Target Start/End: Original strand, 21880365 - 21880474
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||  |||||||      ||||||||||||||||||| ||||| |||||||||    
T  21880365 gcttaaatatgtctttcgttcctgtaaatataagtcatttgaattttcgtctctgaagttactaatcctttcaatctgcccctgcaaatattaatcattt 21880464  T
Q  217 gacttttggt 226  Q
    ||||||||||    
T  21880465 gacttttggt 21880474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 5064336 - 5064446
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||      ||||  |||| |||||||| ||||| |||||||||    
T  5064336 gcttaaatatgtctttcgtccctgtaaatataagtcatttgaattttcgtccctgaagttactaatcctcccaatttgcccctgcaaatattaatcattt 5064435  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  5064436 gacttttggtc 5064446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 738080 - 737970
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||      ||||| ||||||||||||  || || |||||||||    
T  738080 gcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgccccttcaagtattaatcattt 737981  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  737980 gacttttggtc 737970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 13480591 - 13480481
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||||||||||||||| || ||||||| ||||||||||||||||| ||||||||      ||||| ||||||||||||  ||||| |||||||||    
T  13480591 gcttaaatatgtctttcgtccttgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctacaaatattaatcattt 13480492  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  13480491 gacttttggtc 13480481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 23291745 - 23291855
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||||||||||||||||| |||||||| | ||||||||||||| | ||||||||      ||||| ||||||||||||| ||||| |||||||||    
T  23291745 gcttaaatatgtctttcgtccctacaaatataggccatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 23291844  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  23291845 gacttttggtc 23291855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 226
Target Start/End: Complemental strand, 20995074 - 20994965
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| |||||||||| ||||||||| ||||||||||||||||| | ||||||||      ||||| ||||||||||||| ||||| |||||||||    
T  20995074 gcttaaataggtctttcgtctctgcaaatagaagtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 20994975  T
Q  217 gacttttggt 226  Q
    ||||||||||    
T  20994974 gacttttggt 20994965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 5064716 - 5064608
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttga 218  Q
    |||||||||||||||||| ||||||||||| | ||||||||||||||| ||||| ||      ||||| ||||||||||||| ||||| |||||||||||    
T  5064716 ttaaatatgtctttcgtctctgcaaatataggccatttgaattttcgtccctgaggttactaatccttccaatctgcccctgcaaatattaatcatttga 5064617  T
Q  219 cttttggtc 227  Q
    |||||||||    
T  5064616 cttttggtc 5064608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 122 - 224
Target Start/End: Complemental strand, 23292127 - 23292020
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||      ||||| ||||||  ||||| ||||| |||||||||    
T  23292127 gcttaaatatgtctttcgtccatgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctatccctgcaaatattaatcattt 23292028  T
Q  217 gacttttg 224  Q
    ||||||||    
T  23292027 gacttttg 23292020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 122 - 224
Target Start/End: Complemental strand, 30234975 - 30234868
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||||| | ||||||||      ||||| ||||||||||||| ||||| |||||||||    
T  30234975 gcttaaatatgtctttcgtccctgcaaatataggttgtttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 30234876  T
Q  217 gacttttg 224  Q
    ||||||||    
T  30234875 gacttttg 30234868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 26503737 - 26503627
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||| | ||||||      ||||| ||||| ||| ||| ||||| |||||||||    
T  26503737 gcttaaataggtttttcgtccctgcaaatataagtcatttgaattttcgtccatgaagttattaatccttccaatccgccactgcaaatattaatcattt 26503638  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  26503637 gacttttggtc 26503627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 32337949 - 32337844
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||      ||||| |||| |||||||| ||||| |||||||||    
T  32337949 gcttaaatatgtctttcgtcc-tgcaaatataggtcatttgaattttcgtccctgaagttactgatccttccaatatgcccctgcaaatattaatcattt 32337851  T
Q  217 gactttt 223  Q
    |||||||    
T  32337850 gactttt 32337844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 22494262 - 22494153
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||||||||| | ||||||      ||||| ||||||||||||| |||||  ||||||||    
T  22494262 gcttaaatatgttttt-gtccctgcaaatataggtcatttgaattttcgtccttgaagttactaatccttccaatctgcccctgcaaatatcaatcattt 22494164  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  22494163 gacttttggtc 22494153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 225
Target Start/End: Original strand, 32337567 - 32337673
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttga 218  Q
    ||||||| ||||||||||||||||||||||   ||||||||||||||| ||||||||      ||||| |||| |||||||| ||||| |||||||||||    
T  32337567 ttaaataggtctttcgtccctgcaaatatagaccatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaatcatttga 32337666  T
Q  219 cttttgg 225  Q
    |||||||    
T  32337667 cttttgg 32337673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 7612737 - 7612684
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctg 176  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  7612737 cttaaataggtctttcgtccctgcaaatataagtcatttgaattttcgtccctg 7612684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 19296608 - 19296552
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  19296608 ttaaataggtctttcgtccttgcaaatatatgtcatttgaattttcgttcctgaagt 19296552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 20561120 - 20561179
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||| | ||||||    
T  20561120 tgcttaaatatgtctttcatccctgcaaatataggtcatttgaattttcgtccttgaagt 20561179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 23291935 - 23291876
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  23291935 tgcttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagt 23291876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 3299560 - 3299618
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||| | ||||||    
T  3299560 gcttaaataggtctttcgtctctgcaaatataagtcatttgaattttcgtccatgaagt 3299618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 3299942 - 3299884
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||| | ||||||    
T  3299942 gcttaaatatgtatttcgtccctgcaaatataggtcatttgaattttcgtccttgaagt 3299884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 231
Target Start/End: Complemental strand, 20774464 - 20774350
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||||||  |||||||      | ||||||||||||| ||| |||   |||||||||    
T  20774464 gcttaaataggtctttcgtctctgcaaatataggtcatttgtattttcgtctctgaagttactaattctttcaatctgccactgcaaaatttaatcattt 20774365  T
Q  217 gacttttggtcataa 231  Q
    |||||||||||||||    
T  20774364 gacttttggtcataa 20774350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 20994820 - 20994933
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||| |||||||  ||||||||||||||||  |||||||      |||||  |||||| ||||| ||||| |||||||||    
T  20994820 gcttaaatatgtctttcgtccctgtaaatatagttcatttgaattttcgtctctgaagttactaatccttctaatctg-ccctgcaaatattaatcattt 20994918  T
Q  217 gacttttggtcataa 231  Q
     ||||||||||||||    
T  20994919 aacttttggtcataa 20994933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 737901 - 737949
Alignment:
Q  132 gtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  737901 gtctttcgtccctgcaaatataggtcatttgaattttcattcctgaagt 737949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 134 - 224
Target Start/End: Complemental strand, 9607687 - 9607592
Alignment:
Q  134 ctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttgacttttg 224  Q
    |||||||||||||||||||| ||||||||||||||||| | ||||||      |||||  ||| |||||||| ||||| |||||||||||||||||    
T  9607687 ctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttctaatatgcccctgcaaatattaatcatttgacttttg 9607592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 13480399 - 13480340
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| || |||| |||||||||||||| ||||||||||||||||| ||||||||    
T  13480399 tgcttaaataggtttttcatccctgcaaatataggtcatttgaattttcgtccctgaagt 13480340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 32337755 - 32337696
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||||||  |||||||    
T  32337755 tgcttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtctctgaagt 32337696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 3586405 - 3586463
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||||||||| ||| ||||    
T  3586405 gcttaaataggtctttcgtccctacaaatataggtcatttgaattttcgtccctaaagt 3586463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 7612549 - 7612607
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| ||||||||||||||||||||||   ||||||||||||||| ||||||||    
T  7612549 gcttaaataggtctttcgtccctgcaaatatagaccatttgaattttcgtccctgaagt 7612607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 16704692 - 16704634
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| |||||||||||||||||||||| | ||||||||||||||| | ||||||    
T  16704692 gcttaaataggtctttcgtccctgcaaatataggccatttgaattttcgtccttgaagt 16704634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 21544519 - 21544577
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||  ||||||||||||||||||||| |||||||||||||||||  |||||||    
T  21544519 gcttaaatagatctttcgtccctgcaaatataggtcatttgaattttcgtctctgaagt 21544577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 21880747 - 21880637
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| ||||||||||||| |||||||| |  |||||||||||||| ||||||||      ||||| ||||||  ||||| ||||| ||| |||||    
T  21880747 gcttaaataggtctttcgtccctccaaatatatgcaatttgaattttcgtccctgaagttactaatccttccaatctatccctgcaaatattaagcattt 21880648  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  21880647 gacttttggtc 21880637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 5064530 - 5064587
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||| ||||||| ||||||||||||||  |||||||||||||||| ||||||||    
T  5064530 cttaaataggtctttcatccctgcaaatatagatcatttgaattttcgtccctgaagt 5064587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 8427201 - 8427250
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgt 171  Q
    ||||||||||||||||| ||| |||||||||| |||||||||||||||||    
T  8427201 gcttaaatatgtctttcatccttgcaaatataggtcatttgaattttcgt 8427250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 22494069 - 22494012
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||| ||||||| |||||||||||||| || |||||||||||||| ||||||||    
T  22494069 cttaaataagtctttcatccctgcaaatataggttatttgaattttcgtccctgaagt 22494012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 20561307 - 20561200
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagtg-----tcctttcaatctgcccctgtaaatactaatcatttga 218  Q
    ||||||| ||||||||||  || ||||||| ||||||||||||||||| | ||| ||      ||||| ||||||||||||| ||||| |||||||||||    
T  20561307 ttaaataggtctttcgtct-tgtaaatatatgtcatttgaattttcgtccttgatgttattaatccttccaatctgcccctgcaaatattaatcatttga 20561209  T
Q  219 cttttggtc 227  Q
    |||||||||    
T  20561208 cttttggtc 20561200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 21880557 - 21880616
Alignment:
Q  121 tgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||| | ||||||| ||||| |||||||| ||||||||||||||||| ||||||||    
T  21880557 tgcttaaacaggtctttcatccctacaaatataggtcatttgaattttcgtccctgaagt 21880616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 26543008 - 26542945
Alignment:
Q  117 aaaatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||| |||||| || |||||||||||||||||||||| ||||||||| |||||||  |||||||    
T  26543008 aaaaagcttaattaggtctttcgtccctgcaaatataggtcatttgagttttcgtctctgaagt 26542945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 16707034 - 16706976
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||| || |||||| ||||||||||||||| ||||||||||||||||| | ||||||    
T  16707034 gcttaattaggtctttggtccctgcaaatataggtcatttgaattttcgtccttgaagt 16706976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 26503553 - 26503496
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| |||||| ||| ||||||||||| ||||||||||||||||| ||||||||    
T  26503553 gcttaaataagtcttt-gtcactgcaaatataggtcatttgaattttcgtccctgaagt 26503496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 26542807 - 26542749
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| |||||||||  |||||||||||  |||||||||||||||| ||||||||    
T  26542807 gcttaaataggtctttcgtatctgcaaatatagatcatttgaattttcgtccctgaagt 26542749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 31879647 - 31879589
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| ||||||||||  || ||||||| ||||||||||||||||| ||||||||    
T  31879647 gcttaaataggtctttcgtctttggaaatataggtcatttgaattttcgtccctgaagt 31879589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 3586213 - 3586261
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgt 171  Q
    ||||||||| ||||||||||| |||||||||| |||||||||||||||||    
T  3586213 gcttaaataggtctttcgtcc-tgcaaatataggtcatttgaattttcgt 3586261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 231
Target Start/End: Complemental strand, 7612931 - 7612818
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttg 217  Q
    |||||||| ||||||||| |||| |||||||||  |||||||||||||| |||||| |      || || ||||||||| ||| |||   ||||||||||    
T  7612931 cttaaataggtctttcgtgcctgtaaatataagctatttgaattttcgtccctgaaattaccaatctttccaatctgccactgcaaaatttaatcatttg 7612832  T
Q  218 acttttggtcataa 231  Q
    ||||||||||||||    
T  7612831 acttttggtcataa 7612818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 18865121 - 18865170
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgt 171  Q
    ||||||||| |||||| |||||| |||||| |||||||||||||||||||    
T  18865121 gcttaaataggtctttagtccctacaaatacaagtcatttgaattttcgt 18865170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 19296423 - 19296468
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttc 169  Q
    ||||||| |||| ||||||||||||||||| |||||||||||||||    
T  19296423 ttaaataggtctatcgtccctgcaaatataggtcatttgaattttc 19296468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 31879461 - 31879516
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||| |||||||||||||||||||||  ||||||||||||||||| || |||||    
T  31879461 ttaaataggtctttcgtccctgcaaatat-ggtcatttgaattttcgtccccgaagt 31879516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 31386988 - 31386941
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttc 169  Q
    ||||||||| |||||| |||| |||||||||| |||||||||||||||    
T  31386988 gcttaaataggtcttttgtccttgcaaatataggtcatttgaattttc 31386941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 31879841 - 31879783
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||| |||| ||||||||||||| |||||||| ||||||||||||| | | ||||||||    
T  31879841 gcttcaataggtctttcgtccctacaaatataggtcatttgaatttgcatccctgaagt 31879783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 26542615 - 26542675
Alignment:
Q  122 gcttaaatatgtctttcgtccctg--caaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| || ||||||||||   |||||||| ||||||||||||||||| ||||||||    
T  26542615 gcttaaataggtttttcgtccctttacaaatatatgtcatttgaattttcgtccctgaagt 26542675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 20774092 - 20774148
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||| ||||||| ||| | |||||||| ||||||||||||||||| | ||||||    
T  20774092 ttaaataggtctttcatccttacaaatatatgtcatttgaattttcgtccttgaagt 20774148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493 (Bit Score: 55; Significance: 9e-23; HSPs: 2)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 976 - 866
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||| ||||||||      ||||| ||||||||||||| ||||| |||||||||    
T  976 gcttaaatatgtctttcgtccctgtaaatattggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 877  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  876 gacttttggtc 866  T

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Target: scaffold1493; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 788 - 845
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  788 cttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagt 845  T

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Target: scaffold0321 (Bit Score: 55; Significance: 9e-23; HSPs: 3)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 11045 - 10935
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||      || |||||||| ||||||  ||||| |||||||||    
T  11045 gcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatcttttcaatccgcccctacaaatattaatcattt 10946  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  10945 gacttttggtc 10935  T

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Target: scaffold0321; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 115 - 227
Target Start/End: Original strand, 10656 - 10773
Alignment:
Q  115 ataaaatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatacta 209  Q
    |||||| ||||||||| |||||||  ||||||||||||||| ||||||||||||||| |||||| |      |||||||||| |||||||| ||||| ||    
T  10656 ataaaaggcttaaataggtctttcacccctgcaaatataagccatttgaattttcgtccctgaaattattaatcctttcaatatgcccctgcaaatatta 10755  T
Q  210 atcatttgacttttggtc 227  Q
    ||||||||||||||||||    
T  10756 atcatttgacttttggtc 10773  T

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Target: scaffold0321; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 180
Target Start/End: Complemental strand, 10849 - 10794
Alignment:
Q  125 taaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  10849 taaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagt 10794  T

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Target: scaffold0206 (Bit Score: 55; Significance: 9e-23; HSPs: 2)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 10326 - 10436
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| ||||||||||||||||||||||  |||||||||||||||| ||||||||      ||||| |||| |||||||| ||||| |||||||||    
T  10326 gcttaaataggtctttcgtccctgcaaatatagatcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcattt 10425  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  10426 gacttttggtc 10436  T

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Target: scaffold0206; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 176
Target Start/End: Complemental strand, 10515 - 10461
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctg 176  Q
    ||||||||||| || ||||| ||||||||||| ||||||||||||||||| ||||    
T  10515 gcttaaatatgactatcgtctctgcaaatataggtcatttgaattttcgtccctg 10461  T

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Target: scaffold0202 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 124 - 171
Target Start/End: Original strand, 14238 - 14285
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgt 171  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  14238 ttaaataggtctttcgtccctgcaaatataagtcatttgaattttcgt 14285  T

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Target: scaffold0202; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 224
Target Start/End: Complemental strand, 14617 - 14510
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    ||||||||| ||| ||| |||||| ||||||| ||||||||||||||||| | ||||||      |||||  |||||||| ||||||||| |||||||||    
T  14617 gcttaaataggtccttcctccctgtaaatataggtcatttgaattttcgtccttgaagttactaatccttcaaatctgccactgtaaatattaatcattt 14518  T
Q  217 gacttttg 224  Q
     |||||||    
T  14517 aacttttg 14510  T

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Target: scaffold0279 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 11051 - 11109
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  11051 gcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccttgaagt 11109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 10854 - 10903
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgt 171  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  10854 gcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgt 10903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 11230 - 11182
Alignment:
Q  132 gtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    |||||||||||||| ||||||| ||||||||||||||||| | ||||||    
T  11230 gtctttcgtccctgtaaatataggtcatttgaattttcgtccttgaagt 11182  T

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Target: scaffold0022 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 120581 - 120532
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgt 171  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  120581 gcttaaatatgtctttcgtctctgcaaatatatgtcatttcaattttcgt 120532  T

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Target: scaffold0022; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 120388 - 120331
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||||  ||||||||||||||||||||| || |||||||||||||| | ||||||    
T  120388 cttaaatagatctttcgtccctgcaaatatatgttatttgaattttcgtccatgaagt 120331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 120208 - 120253
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttc 169  Q
    ||||||| ||||||||||||||||||| ||  ||||||||||||||    
T  120208 ttaaataggtctttcgtccctgcaaatgtagatcatttgaattttc 120253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 37; Significance: 0.000000000005; HSPs: 3)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 218
Target Start/End: Original strand, 8435 - 8535
Alignment:
Q  123 cttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcatttg 217  Q
    |||||||| |||||||||| ||  ||||||| ||||||||||||||||| ||||||||      ||||| ||||||||| ||| ||||| ||||||||||    
T  8435 cttaaataggtctttcgtctctttaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaatattaatcatttg 8534  T
Q  218 a 218  Q
    |    
T  8535 a 8535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 8623 - 8578
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattt 167  Q
    ||||||||| |||||||||||||||||||||  |||||||||||||    
T  8623 gcttaaataggtctttcgtccctgcaaatatctgtcatttgaattt 8578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 8821 - 8770
Alignment:
Q  116 taaaatgcttaaatatgtctttcgtccctgcaaatataagtcatttgaattt 167  Q
    ||||| ||||||||| || ||||||||||| ||||||| |||||||||||||    
T  8821 taaaaggcttaaataggtatttcgtccctgtaaatataggtcatttgaattt 8770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 37; Significance: 0.000000000005; HSPs: 3)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 14089 - 14145
Alignment:
Q  124 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt 180  Q
    ||||||| ||||||| |||||||||||||| ||||||||||||||||| | ||||||    
T  14089 ttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccatgaagt 14145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 13894 - 14004
Alignment:
Q  122 gcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagt-----gtcctttcaatctgcccctgtaaatactaatcattt 216  Q
    |||||||||||||||||||| ||| ||||||| || ||||||||||||||  || || |      ||||| ||| || |||||| ||||| |||||||||    
T  13894 gcttaaatatgtctttcgtctctgtaaatataggtaatttgaattttcgtcactcaaattactaatccttccaacctacccctgcaaatattaatcattt 13993  T
Q  217 gacttttggtc 227  Q
    |||||||||||    
T  13994 gacttttggtc 14004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 14211 - 14166
Alignment:
Q  182 tcctttcaatctgcccctgtaaatactaatcatttgacttttggtc 227  Q
    ||||| ||||||||||||  ||||| ||||||||||||||||||||    
T  14211 tccttccaatctgcccctacaaatattaatcatttgacttttggtc 14166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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