View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6002_low_2 (Length: 788)

Name: NF6002_low_2
Description: NF6002
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6002_low_2
NF6002_low_2
[»] chr6 (10 HSPs)
chr6 (132-522)||(24254340-24254733)
chr6 (214-437)||(6921352-6921575)
chr6 (311-437)||(6947882-6948008)
chr6 (312-449)||(6954509-6954646)
chr6 (380-450)||(17369675-17369745)
chr6 (322-450)||(20770603-20770731)
chr6 (326-437)||(6935220-6935331)
chr6 (627-727)||(24254135-24254235)
chr6 (369-435)||(6942971-6943037)
chr6 (326-435)||(14749354-14749463)
[»] chr7 (43 HSPs)
chr7 (131-538)||(19344473-19344883)
chr7 (41-528)||(19325887-19326371)
chr7 (131-538)||(19374529-19374928)
chr7 (210-450)||(12819905-12820145)
chr7 (218-450)||(19351058-19351290)
chr7 (207-432)||(22021230-22021455)
chr7 (210-423)||(16839397-16839610)
chr7 (322-437)||(19604465-19604580)
chr7 (364-450)||(660836-660922)
chr7 (210-423)||(16846480-16846693)
chr7 (208-437)||(18952907-18953136)
chr7 (208-437)||(18997600-18997829)
chr7 (627-719)||(12819666-12819758)
chr7 (366-450)||(14076675-14076759)
chr7 (366-450)||(14386703-14386787)
chr7 (627-727)||(19325691-19325791)
chr7 (216-423)||(22036933-22037140)
chr7 (311-437)||(1985957-1986083)
chr7 (208-437)||(18982954-18983183)
chr7 (341-450)||(19357882-19357991)
chr7 (222-403)||(19637253-19637434)
chr7 (369-450)||(29430990-29431071)
chr7 (369-450)||(29454092-29454173)
chr7 (375-450)||(29859460-29859535)
chr7 (627-692)||(19645433-19645498)
chr7 (369-446)||(19722018-19722095)
chr7 (341-445)||(22100465-22100569)
chr7 (392-450)||(18514776-18514834)
chr7 (364-450)||(29867231-29867317)
chr7 (364-450)||(29874506-29874592)
chr7 (375-448)||(9807830-9807903)
chr7 (369-430)||(20414882-20414943)
chr7 (364-449)||(29921983-29922068)
chr7 (386-450)||(6864796-6864860)
chr7 (341-417)||(22070083-22070159)
chr7 (322-441)||(22028581-22028700)
chr7 (364-447)||(22080863-22080946)
chr7 (304-442)||(19779537-19779675)
chr7 (304-442)||(19887708-19887846)
chr7 (222-276)||(22473315-22473369)
chr7 (137-178)||(18953166-18953207)
chr7 (137-178)||(18983213-18983254)
chr7 (322-435)||(21218712-21218825)
[»] chr4 (12 HSPs)
chr4 (206-545)||(53790381-53790732)
chr4 (364-448)||(53774835-53774919)
chr4 (311-450)||(3565686-3565825)
chr4 (364-450)||(11970971-11971057)
chr4 (369-450)||(3557726-3557807)
chr4 (326-445)||(8443448-8443567)
chr4 (364-450)||(11981672-11981758)
chr4 (369-450)||(3560947-3561028)
chr4 (497-538)||(10482312-10482353)
chr4 (363-434)||(35767012-35767083)
chr4 (372-430)||(1686294-1686352)
chr4 (627-681)||(53790823-53790877)
[»] chr5 (13 HSPs)
chr5 (307-457)||(29597534-29597684)
chr5 (299-447)||(29647606-29647754)
chr5 (307-447)||(29642297-29642437)
chr5 (364-450)||(18964819-18964905)
chr5 (611-727)||(29820910-29821026)
chr5 (613-727)||(29642597-29642711)
chr5 (306-450)||(28763894-28764035)
chr5 (613-706)||(29597298-29597390)
chr5 (210-263)||(29597734-29597787)
chr5 (216-246)||(18965026-18965056)
chr5 (1-75)||(29647324-29647398)
chr5 (207-348)||(3234026-3234167)
chr5 (18-75)||(29597898-29597955)
[»] chr2 (7 HSPs)
chr2 (203-451)||(18913545-18913793)
chr2 (203-451)||(18908797-18909045)
chr2 (203-451)||(18920753-18921001)
chr2 (321-450)||(14514852-14514981)
chr2 (341-437)||(554448-554544)
chr2 (358-416)||(20975547-20975605)
chr2 (210-275)||(20967541-20967606)
[»] chr1 (4 HSPs)
chr1 (207-450)||(4366484-4366727)
chr1 (364-450)||(39379050-39379136)
chr1 (375-437)||(4014967-4015029)
chr1 (364-437)||(4570922-4570995)
[»] scaffold0464 (1 HSPs)
scaffold0464 (341-450)||(8033-8142)
[»] chr3 (6 HSPs)
chr3 (372-450)||(3625737-3625815)
chr3 (304-450)||(12734779-12734925)
chr3 (627-673)||(25901042-25901088)
chr3 (627-673)||(25915060-25915106)
chr3 (321-442)||(32578862-32578983)
chr3 (327-400)||(36340073-36340146)
[»] scaffold0867 (1 HSPs)
scaffold0867 (341-445)||(4663-4767)
[»] chr8 (1 HSPs)
chr8 (375-414)||(29390292-29390331)
[»] scaffold0354 (1 HSPs)
scaffold0354 (377-450)||(7471-7544)


Alignment Details
Target: chr6 (Bit Score: 176; Significance: 2e-94; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 132 - 522
Target Start/End: Complemental strand, 24254733 - 24254340
Alignment:
Q  132 aaggagtgtatttgagtggcactgttaactggtttgccattagaaacaagttgagttatgataattatcctaatgatattactgttgagcaatttgtgat 231  Q
    |||||||||||||||||||||| ||||| |||||||||||| |||| |||   | |||| ||  ||||  ||| |||||||| |||||||||||  ||||    
T  24254733 aaggagtgtatttgagtggcacagttaattggtttgccattcgaaataaggccatttataattcttataataaggatattaccgttgagcaattcatgat 24254634  T
Q  232 tatctcacttgatcttcgtacagagacatacaaacaattgcttctacctcgtggtgttgatgaagttccatatgttgaaccaactattgctgtgttgatg 331  Q
    |||||| ||||||||| |||| ||||||||||| ||||| |     ||||| |||||||||||||| ||| || ||||||| ||||||||||||||||||    
T  24254633 tatctcccttgatcttggtactgagacatacaagcaatttcagacccctcggggtgttgatgaagtgccagatattgaaccgactattgctgtgttgatg 24254534  T
Q  332 gactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaa 431  Q
    |||||||| |||||||||||| || ||||||||||||||||| ||||||||||||||  |||||||||||| |||||||||||||| |||||| | ||||    
T  24254533 gactgcctttgtttttctcactatatcaagagaactcattttgttatatggcagatgtcggaatttggagtcgaacaatcttggactcaattcatcaaaa 24254434  T
Q  432 ttagttttcagaatcttcatgtagatgctaggtttagtgactggagtaattatcaa---tttatgttcccattgtgtctttctaagaatggtga 522  Q
    | |||||| ||||| |||| ||||||| ||||||||||||||||| |  |||||||   |||||||||||||||||||||||| ||||||||||    
T  24254433 tcagttttgagaatgttcaagtagatgataggtttagtgactggaatcgttatcaatcgtttatgttcccattgtgtctttctgagaatggtga 24254340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 214 - 437
Target Start/End: Complemental strand, 6921575 - 6921352
Alignment:
Q  214 tgttgagcaatttgtgattatctcacttgatcttcgtacagagacatacaaacaattgcttctacctcgtggtgttgatgaagttccatatgttgaacca 313  Q
    |||||| ||||||||||| |||||||||||| |  | ||||||||||| | ||||||| | || |||||  ||  ||||||||  | | ||  ||  |||    
T  6921575 tgttgaacaatttgtgatgatctcacttgatttggggacagagacatatacacaattgttgctccctcgatgttgtgatgaagagctacataatgttcca 6921476  T
Q  314 actattgctgtgttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaacaatctt 413  Q
    ||| || |||| |||||||| ||||||| ||||||| |  ||   |||| ||| |||||| |||| ||||| |||| |||||||||||||||| ||||||    
T  6921475 actctttctgtattgatggattgcctctatttttcttatgattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatctt 6921376  T
Q  414 ggacccaattccttaaaattagtt 437  Q
    |||| |||||||||||||||||||    
T  6921375 ggactcaattccttaaaattagtt 6921352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 311 - 437
Target Start/End: Complemental strand, 6948008 - 6947882
Alignment:
Q  311 ccaactattgctgtgttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaacaat 410  Q
    |||||| || ||||||||||||| ||||| |||||||| ||  || |||||| ||| || ||| || | ||||| |||| |||||||||||||||| |||    
T  6948008 ccaactctttctgtgttgatggattgcctttgtttttcacatgatttcaagaaaacccactttgttctttggcaaatgaaggaatttggagttgaagaat 6947909  T
Q  411 cttggacccaattccttaaaattagtt 437  Q
    ||||||| |||||||||||||||||||    
T  6947908 cttggactcaattccttaaaattagtt 6947882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 312 - 449
Target Start/End: Complemental strand, 6954646 - 6954509
Alignment:
Q  312 caactattgctgtgttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaacaatc 411  Q
    ||||| || |||| |||||||| ||||||||||| ||| |  || |||| | ||| |||||| |||| ||||| |||| |||||||||||||||| ||||    
T  6954646 caactctttctgtattgatggattgcctctgtttatcttatgatttcaacaaaacccattttgttatttggcaaatgaaggaatttggagttgaagaatc 6954547  T
Q  412 ttggacccaattccttaaaattagttttcagaatcttc 449  Q
    |||||| |||||  ||||||||||||||| || |||||    
T  6954546 ttggactcaattgattaaaattagttttccgattcttc 6954509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 380 - 450
Target Start/End: Original strand, 17369675 - 17369745
Alignment:
Q  380 tggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaattagttttcagaatcttca 450  Q
    ||||| |||| |||||||||||||||| | |||||||| ||||| ||||||||||||| ||||||||||||    
T  17369675 tggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaattagttatcagaatcttca 17369745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 322 - 450
Target Start/End: Original strand, 20770603 - 20770731
Alignment:
Q  322 tgtgttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaacaatcttggacccaa 421  Q
    |||||||||||| ||  | |||||||||||  || | || | |||| ||||| |||||||||| |||| |||||||||| ||||| | || ||||  |||    
T  20770603 tgtgttgatggattgtatttgtttttctcatgatgttaaaaaaacttattttgttatatggcaaatgaaggaatttggaattgaagagtcatggattcaa 20770702  T
Q  422 ttccttaaaattagttttcagaatcttca 450  Q
    |||||||||||||||| ||| ||||||||    
T  20770703 ttccttaaaattagttatcataatcttca 20770731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 326 - 437
Target Start/End: Complemental strand, 6935331 - 6935220
Alignment:
Q  326 ttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaacaatcttggacccaattcc 425  Q
    |||||||| ||||||| ||||||| |  || | |||| ||| |||| | |||| ||||| |||| ||||||||||||| || ||||||||||  ||||||    
T  6935331 ttgatggattgcctctatttttcttatgattttaagaaaacccattatgttatttggcaaatgaaggaatttggagttcaagaatcttggactaaattcc 6935232  T
Q  426 ttaaaattagtt 437  Q
    ||||||||||||    
T  6935231 ttaaaattagtt 6935220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 627 - 727
Target Start/End: Complemental strand, 24254235 - 24254135
Alignment:
Q  627 aggattatgctgaaagtttggtttcaattcgttgaaagtgagtttcttcatgatgagttacttgttcgactttatttgaattaatgtacgttgttttgaa 726  Q
    ||||||| | ||||||||||| ||||||| ||||||| | |||||||| ||||||| |||||||||| | ||| |||| ||| |||   |||||||||||    
T  24254235 aggattacgttgaaagtttggcttcaatttgttgaaaataagtttctttatgatgatttacttgttctaatttgtttggattcatgcgtgttgttttgaa 24254136  T
Q  727 a 727  Q
    |    
T  24254135 a 24254135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 369 - 435
Target Start/End: Complemental strand, 6943037 - 6942971
Alignment:
Q  369 attttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaattag 435  Q
    ||||| |||| | ||| |||| |||||||||||||||| |||||| ||| |||||||||||||||||    
T  6943037 attttgttatttagcaaatgaaggaatttggagttgaagaatcttagacgcaattccttaaaattag 6942971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 326 - 435
Target Start/End: Original strand, 14749354 - 14749463
Alignment:
Q  326 ttgatggactgcctctgtttttctcaccatctcaagaga-actcattttattatatggcagatgatggaatttggagttgaacaatcttggacccaattc 424  Q
    |||||||| || || ||||||||||||| | |||| ||| || |||||| || |||||  ||||||||||||||||||| || | |||||||| ||||||    
T  14749354 ttgatggattgtctatgtttttctcaccgtttcaa-agagacccattttgttttatggaggatgatggaatttggagttcaagagtcttggactcaattc 14749452  T
Q  425 cttaaaattag 435  Q
    || ||||||||    
T  14749453 ctcaaaattag 14749463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 165; Significance: 8e-88; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 165; E-Value: 8e-88
Query Start/End: Original strand, 131 - 538
Target Start/End: Complemental strand, 19344883 - 19344473
Alignment:
Q  131 aaaggagtgtatttgagtggcactgttaactggtttgccattagaaacaagttgagttatgataattatcctaatgatattactgttgagcaatttgtga 230  Q
    ||||||||||||||||| |||||||||||||||| |||||||  ||  ||||| ||| |  || ||| ||  || ||||||||||||| | |||||||||    
T  19344883 aaaggagtgtatttgagcggcactgttaactggtatgccattcaaagtaagttcagtcaatattattgtcagaaggatattactgttgggaaatttgtga 19344784  T
Q  231 ttatctcacttgatcttcgtacagagacatacaaacaattgcttctacctcgtggtgttgatgaagttccatatgttgaaccaactattgctgtgttgat 330  Q
    ||||||| ||||||||| |||| ||||||||||| ||||| |     | | |||| ||||||||||| ||| || ||||||  ||||||||||| |||||    
T  19344783 ttatctcccttgatcttggtaccgagacatacaagcaatttcagacccttagtggcgttgatgaagtgccagattttgaactgactattgctgtattgat 19344684  T
Q  331 ggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaa 430  Q
    ||||||||| |||||||||||| |||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  19344683 ggactgcctttgtttttctcacaatctcaagaacactcattttgttatatggcagatgatggaatttggagttgaacaatcttggactcaatttcttaaa 19344584  T
Q  431 attagttttcagaatcttcatgtagatgctaggtttagtgactggagtaattatc---aatttatgttcccattgtgtctttctaagaatggtgatacac 527  Q
    |||||||||||||||||||  |  |||| ||||||||||||| ||| | ||| ||   | |||||||| |||||||| |||||||| |||||||||||||    
T  19344583 attagttttcagaatcttctaggggatgataggtttagtgaccggatttattgtccatattttatgtttccattgtggctttctaaaaatggtgatacac 19344484  T
Q  528 tgatataggca 538  Q
    || ||| ||||    
T  19344483 tgctattggca 19344473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 41 - 528
Target Start/End: Complemental strand, 19326371 - 19325887
Alignment:
Q  41 gttttcagtttgggtgataatatttggagaaaaatctcaagcttaacaccatttgaccatgttgtaactcgcgacctagctagtgtaaacaaaggagtgt 140  Q
    |||||||||||| |||||||||||||||||||||| ||||||||  | || |||||||||| ||| ||||  | | |   ||||   ||| |||||||||    
T  19326371 gttttcagtttgagtgataatatttggagaaaaatttcaagctttcctccttttgaccatgctgttactcttggctt---tagtaagaacgaaggagtgt 19326275  T
Q  141 atttgagtggcactgttaactggtttgccattagaaacaagttgagttatgataattatcctaatgatattactgttgagcaatttgtgattatctcact 240  Q
    ||||||||||||| ||||||||||||||| || |||  ||||  |||||| ||||          |||||||| || ||||||||| |||||||||| ||    
T  19326274 atttgagtggcacagttaactggtttgcccttcgaagtaagtctagttataataag---------gatattaccgtcgagcaatttatgattatctccct 19326184  T
Q  241 tgatcttcgtacagagacatacaaacaattgcttctacctcgtggtgttgatgaagttccatatgttgaaccaactattgctgtgttgatggactgcctc 340  Q
    ||||||| |||| ||||||||||| ||||| |     |||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||| ||||     
T  19326183 tgatcttggtactgagacatacaagcaatttcagacccctcgtggtgttgatgaagtgccatatgttgcaccgactattgctgtgttgatggaccgcctt 19326084  T
Q  341 tgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaattagttttc 440  Q
    |||||||||||| || ||||||||||||||||| |||||||||| |||  |||||||||||| |||||||||||||| |||||| | ||||| |||||||    
T  19326083 tgtttttctcactatatcaagagaactcattttgttatatggcatatgtcggaatttggagtagaacaatcttggactcaattcatcaaaatcagttttc 19325984  T
Q  441 agaatcttcatgtagatg------ctaggtttagtgactggagtaattatcaat---ttatgttcccattgtgtctttctaagaatggtgatacact 528  Q
    ||||| |||| |||||||       ||||||||| ||||||  | |||||||||   ||||||||||||||||||||||| ||||| ||||||||||    
T  19325983 agaatgttcaagtagatgataggtttaggtttagcgactggtttcattatcaatcgcttatgttcccattgtgtctttctgagaatagtgatacact 19325887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 131 - 538
Target Start/End: Original strand, 19374529 - 19374928
Alignment:
Q  131 aaaggagtgtatttgagtggcactgttaactggtttgccattagaaacaagttgagttatgataattatcctaatgatattactgttgagcaatttgtga 230  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||  ||||| ||| ||||| ||| ||  || || |||||||||| | |||||||||    
T  19374529 aaaggagtgtatttgagcggcactgttaactggtttgccattcgaagtaagttcagtcatgattattgtcagaaggagattactgttgggaaatttgtga 19374628  T
Q  231 ttatctcacttgatcttcgtacagagacatacaaacaattgcttctacctcgtggtgttgatgaagttccatatgttgaaccaactattgctgtgttgat 330  Q
    ||||||| ||||||||| |||| ||||||||||| ||||| |     ||| |||| ||||||||||| ||| |||| ||||  ||||||||||| ||||     
T  19374629 ttatctcccttgatcttggtaccgagacatacaagcaatttcagacccctagtggcgttgatgaagtgccagatgtggaactgactattgctgtattgac 19374728  T
Q  331 ggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaa 430  Q
    ||||||||| |||||||||||| |||||||||  || |||||| |||           | |||||||||||||||||  |||||||| ||||| ||||||    
T  19374729 ggactgcctttgtttttctcacaatctcaagaacacacattttgtta-----------acggaatttggagttgaacggtcttggactcaatttcttaaa 19374817  T
Q  431 attagttttcagaatcttcatgtagatgctaggtttagtgactggagtaattatcaa---tttatgttcccattgtgtctttctaagaatggtgatacac 527  Q
    ||||||||  ||||||||   || |||| ||||||||||||| ||| | ||||||||   |||||||| |||||||| |||||||| |||||||||||||    
T  19374818 attagtttaaagaatcttttagtggatgataggtttagtgaccggatttattatcaatgttttatgtttccattgtggctttctaaaaatggtgatacac 19374917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 210 - 450
Target Start/End: Complemental strand, 12820145 - 12819905
Alignment:
Q  210 ttactgttgagcaatttgtgattatctcacttgatcttcgtacagagacatacaaacaattgcttctacctcgtggtgttgatgaagttccatatgttga 309  Q
    |||||||||| ||| || |||||||||| ||||||||| |||| |||| |||||  |  ||||| |  |||||||  ||||||||||| |||  |||| |    
T  12820145 ttactgttgaacaacttatgattatctcccttgatcttagtaccgagatatacacgcgcttgctgccccctcgtgaggttgatgaagtgccagttgttca 12820046  T
Q  310 accaactattgctgtgttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaacaa 409  Q
    || || | ||||||| || | |||| |||| ||||||||||||   |||||||||||| ||||| || |||||||||||| |||||||||||||||||||    
T  12820045 acaaagtcttgctgtattaagggaccgcctttgtttttctcacatgctcaagagaacttattttgttgtatggcagatgacggaatttggagttgaacaa 12819946  T
Q  410 tcttggacccaattccttaaaattagttttcagaatcttca 450  Q
    || ||||| |||||||||||||| |||| ||||||||||||    
T  12819945 tcctggactcaattccttaaaatcagttgtcagaatcttca 12819905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 218 - 450
Target Start/End: Complemental strand, 19351290 - 19351058
Alignment:
Q  218 gagcaatttgtgattatctcacttgatcttcgtacagagacatacaaacaattgcttctacctcgtggtgttgatgaagttccatatgttgaaccaacta 317  Q
    ||||||||||||||||| |||||||||||  |||| ||||||||  |||| ||  | | |||||||||| ||| |||||| |||  || ||| ||| |      
T  19351290 gagcaatttgtgattatttcacttgatctgggtacggagacatatcaacagtttttgccacctcgtggttttgttgaagtaccacctgctgagccatccg 19351191  T
Q  318 ttgctgtgttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaacaatcttggac 417  Q
    || |||| |||||||| || || |||||||||||| ||||||| || || |||||| || ||||||||||||||||||||||||||||  | ||||||||    
T  19351190 ttactgtattgatggattgtctatgtttttctcacaatctcaaaaggacccattttgttttatggcagatgatggaatttggagttgaggagtcttggac 19351091  T
Q  418 ccaattccttaaaattagttttcagaatcttca 450  Q
     | |||||| ||||||||||||||| |||||||    
T  19351090 tccattcctcaaaattagttttcaggatcttca 19351058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 207 - 432
Target Start/End: Original strand, 22021230 - 22021455
Alignment:
Q  207 atattactgttgagcaatttgtgattatctcacttgatcttcgtacagagacatacaaacaattgcttctacctcgtggtgttgatgaagttccatatgt 306  Q
    |||||||| |||||||||||  |||| | |||||||||||| |||| ||||||| |||| | |||||||| || || ||| |||||||||| |||  | |    
T  22021230 atattactattgagcaatttaagattgtttcacttgatcttggtacggagacatgcaaagagttgcttctcccgcgaggttttgatgaagtcccaagttt 22021329  T
Q  307 tgaaccaactattgctgtgttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaa 406  Q
    ||| ||| || |   |||||||||||| ||| | ||||||||||| | | | |||| ||| |||||  ||||||||||||||||||| | ||||||||||    
T  22021330 tgagccatctctatgtgtgttgatggattgcatttgtttttctcatcttgtgaagaaaacccatttggttatatggcagatgatggattatggagttgaa 22021429  T
Q  407 caatcttggacccaattccttaaaat 432  Q
     |||||||||| ||||| ||||||||    
T  22021430 gaatcttggactcaattacttaaaat 22021455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 210 - 423
Target Start/End: Complemental strand, 16839610 - 16839397
Alignment:
Q  210 ttactgttgagcaatttgtgattatctcacttgatcttcgtacagagacatacaaacaattgcttctacctcgtggtgttgatgaagttccatatgttga 309  Q
    ||||||||||||||||||||||||| ||||||||| |  | || |||||||||||| | |||||||  ||||| ||| ||| |||||| |||| | || |    
T  16839610 ttactgttgagcaatttgtgattatttcacttgatttgggcacggagacatacaaatatttgcttccccctcgaggttttgttgaagtgccatttattaa 16839511  T
Q  310 accaactattgctgtgttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaacaa 409  Q
     ||| |||||  | |||||||||||||||| |||||||||||   | | |||| ||||||| || |||||||| ||||||  || | ||||||| || |     
T  16839510 gccatctatttgtctgttgatggactgcctttgtttttctcatgttgttaagaaaactcatcttgttatatggaagatgacagattatggagttcaagag 16839411  T
Q  410 tcttggacccaatt 423  Q
    |||||||| |||||    
T  16839410 tcttggactcaatt 16839397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 322 - 437
Target Start/End: Complemental strand, 19604580 - 19604465
Alignment:
Q  322 tgtgttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaacaatcttggacccaa 421  Q
    |||||||||||||| | | |||||||||||  || |  | | |||||| ||||||||||||||||||| |||||||||||||||| | || ||||| |||    
T  19604580 tgtgttgatggactccatttgtttttctcatgattttcataaaactcactttattatatggcagatgaaggaatttggagttgaagactcctggactcaa 19604481  T
Q  422 ttccttaaaattagtt 437  Q
    ||||||||||||||||    
T  19604480 ttccttaaaattagtt 19604465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 364 - 450
Target Start/End: Complemental strand, 660922 - 660836
Alignment:
Q  364 aactcattttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaattagttttcagaatcttca 450  Q
    ||||| |||| ||||||||||||||| ||||||| |||||||| | |||||||| ||||||||||||||||||| ||| ||||||||    
T  660922 aactcgttttgttatatggcagatgaaggaatttcgagttgaagagtcttggactcaattccttaaaattagttatcataatcttca 660836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 210 - 423
Target Start/End: Complemental strand, 16846693 - 16846480
Alignment:
Q  210 ttactgttgagcaatttgtgattatctcacttgatcttcgtacagagacatacaaacaattgcttctacctcgtggtgttgatgaagttccatatgttga 309  Q
    ||||||||||||||||||||||||| || |||||| |  | || |||||||||||| | |||||||  ||||| ||| ||| |||||| |||| | || |    
T  16846693 ttactgttgagcaatttgtgattatttctcttgatttgggcacggagacatacaaatatttgcttccccctcgaggttttgttgaagtgccatttattaa 16846594  T
Q  310 accaactattgctgtgttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaacaa 409  Q
     ||| |||||  | |||||||||||||||| |||||||||||   | |||||  ||||||| || |||||||| ||||||  || | ||||||| || |     
T  16846593 gccatctatttgtctgttgatggactgcctttgtttttctcatgttgtcaagcaaactcatcttgttatatggaagatgacagattatggagttcaagag 16846494  T
Q  410 tcttggacccaatt 423  Q
    |||||||| |||||    
T  16846493 tcttggactcaatt 16846480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 208 - 437
Target Start/End: Complemental strand, 18953136 - 18952907
Alignment:
Q  208 tattactgttgagcaatttgtgattatctcacttgatcttcgtacagagacatacaaacaattgcttctacctcgtggtgttgatgaagttccatatgtt 307  Q
    ||||||| |||| ||||||||||| ||||| |||||| |  | || ||||||||||| ||||| || || |||| |||| ||||||||||  | | ||||    
T  18953136 tattactattgaccaatttgtgatcatctcccttgatttgaggacggagacatacaatcaatttctactccctcttggttttgatgaagtgacgtctgtt 18953037  T
Q  308 gaaccaactattgctgtgttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaac 407  Q
    || || ||| |  || | |||||||||| ||| |||||||||||  || |  |  | || |||||||| ||||||||||||| |||||||||||||||      
T  18953036 gagcccactctatctttcttgatggactccctatgtttttctcatgattttcatgggacccattttatcatatggcagatgaaggaatttggagttgaca 18952937  T
Q  408 aatcttggacccaattccttaaaattagtt 437  Q
    | || ||||| || ||||||||||||||||    
T  18952936 agtcatggactcagttccttaaaattagtt 18952907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 208 - 437
Target Start/End: Complemental strand, 18997829 - 18997600
Alignment:
Q  208 tattactgttgagcaatttgtgattatctcacttgatcttcgtacagagacatacaaacaattgcttctacctcgtggtgttgatgaagttccatatgtt 307  Q
    ||||||| |||| ||||||||||| ||||| |||||| |  | || ||||||||||| ||||| || || |||| |||| ||||||||||  | | ||||    
T  18997829 tattactattgaccaatttgtgatcatctcccttgatttgaggacggagacatacaatcaatttctactccctcttggttttgatgaagtgacgtctgtt 18997730  T
Q  308 gaaccaactattgctgtgttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaac 407  Q
    || || ||| |  || | |||||||||| ||| |||||||||||  || |  |  | || |||||||| ||||||||||||| |||||||||||||||      
T  18997729 gagcccactctatctttcttgatggactccctatgtttttctcatgattttcatgggacccattttatcatatggcagatgaaggaatttggagttgaca 18997630  T
Q  408 aatcttggacccaattccttaaaattagtt 437  Q
    | || ||||| || ||||||||||||||||    
T  18997629 agtcctggactcagttccttaaaattagtt 18997600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 627 - 719
Target Start/End: Complemental strand, 12819758 - 12819666
Alignment:
Q  627 aggattatgctgaaagtttggtttcaattcgttgaaagtgagtttcttcatgatgagttacttgttcgactttatttgaattaatgtacgttg 719  Q
    ||||||||| ||||||||||| ||||||| ||||||| ||||||||| |||| ||| ||||||||| || |||||||||||| ||||| ||||    
T  12819758 aggattatgttgaaagtttggcttcaatttgttgaaactgagtttctacatgttgatttacttgtttgaatttatttgaattcatgtatgttg 12819666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 366 - 450
Target Start/End: Original strand, 14076675 - 14076759
Alignment:
Q  366 ctcattttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaattagttttcagaatcttca 450  Q
    |||||||  |||||||||| |||| |||||||||||||||| | |||||||| ||||| ||||||||||||| ||||||||||||    
T  14076675 ctcatttcgttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaattagttatcagaatcttca 14076759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 366 - 450
Target Start/End: Original strand, 14386703 - 14386787
Alignment:
Q  366 ctcattttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaattagttttcagaatcttca 450  Q
    |||||||  |||||||||| |||| |||||||||||||||| | |||||||| ||||| ||||||||||||| ||||||||||||    
T  14386703 ctcatttcgttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaattagttatcagaatcttca 14386787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 627 - 727
Target Start/End: Complemental strand, 19325791 - 19325691
Alignment:
Q  627 aggattatgctgaaagtttggtttcaattcgttgaaagtgagtttcttcatgatgagttacttgttcgactttatttgaattaatgtacgttgttttgaa 726  Q
    ||||||||| ||||||||||| ||||||| ||||||||| |||||||| ||||||| |||||||||| | ||| |||||||| |||   |||||||||||    
T  19325791 aggattatgttgaaagtttggcttcaatttgttgaaagtaagtttctttatgatgatttacttgttccaatttgtttgaattcatgcgggttgttttgaa 19325692  T
Q  727 a 727  Q
    |    
T  19325691 a 19325691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 216 - 423
Target Start/End: Original strand, 22036933 - 22037140
Alignment:
Q  216 ttgagcaatttgtgattatctcacttgatcttcgtacagagacatacaaacaattgcttctacctcgtggtgttgatgaagttccatatgttgaaccaac 315  Q
    ||||||||||| ||||| |  |||||||||| ||||||||||||| |||| | |||||||| ||||| ||| |||| ||||| |||| |  ||| ||| |    
T  22036933 ttgagcaatttatgattgttgcacttgatctgcgtacagagacatgcaaagagttgcttctccctcgaggttttgacgaagtcccatgttatgagccatc 22037032  T
Q  316 tattgctgtgttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaacaatcttgg 415  Q
    | |   |||||||||||| ||| | ||||||||||| | | |||||| ||| |||||  |||||||| |||||||||| | ||||| |||  | ||||||    
T  22037033 tctatgtgtgttgatggattgcatttgtttttctcatcttgtcaagaaaacccatttggttatatggaagatgatggattatggagatgatgattcttgg 22037132  T
Q  416 acccaatt 423  Q
    || |||||    
T  22037133 actcaatt 22037140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 311 - 437
Target Start/End: Complemental strand, 1986083 - 1985957
Alignment:
Q  311 ccaactattgctgtgttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaacaat 410  Q
    |||||| || ||||||||||||| ||||||| ||||||| |  || |||||| ||| |||||| || | ||||| |||| ||||||||| |||||| |||    
T  1986083 ccaactctttctgtgttgatggattgcctctatttttcttatgatttcaagaaaacccattttgttctttggcaaatgaaggaatttggcgttgaagaat 1985984  T
Q  411 cttggacccaattccttaaaattagtt 437  Q
    ||||||| |||||  ||||||||||||    
T  1985983 cttggactcaattgtttaaaattagtt 1985957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 208 - 437
Target Start/End: Complemental strand, 18983183 - 18982954
Alignment:
Q  208 tattactgttgagcaatttgtgattatctcacttgatcttcgtacagagacatacaaacaattgcttctacctcgtggtgttgatgaagttccatatgtt 307  Q
    ||||||| |||| ||||| ||||| ||||| |||||| |  | || ||||||||||| ||||| || || |||| |||| ||||||||||  | | ||||    
T  18983183 tattactattgaccaattcgtgatcatctcccttgatttgaggacggagacatacaatcaatttctactccctcttggttttgatgaagtgacgtctgtt 18983084  T
Q  308 gaaccaactattgctgtgttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaac 407  Q
    || || ||  |  || | |||||||||| ||| |||||||||||  || |  |  | || |||||||| ||||||||||||| |||||||||||||||      
T  18983083 gagcccaccctatctttcttgatggactccctatgtttttctcatgattttcatgggacccattttatcatatggcagatgaaggaatttggagttgaca 18982984  T
Q  408 aatcttggacccaattccttaaaattagtt 437  Q
    | || ||||| || ||||||||||||||||    
T  18982983 agtcctggactcagttccttaaaattagtt 18982954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 341 - 450
Target Start/End: Original strand, 19357882 - 19357991
Alignment:
Q  341 tgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaattagttttc 440  Q
    |||||||||||| || ||||  | || |||||  || ||||| |||||||||||||||||||| || | |||||||| |||||| | |||||||||||||    
T  19357882 tgtttttctcactatttcaaagggacccatttcgttttatggaagatgatggaatttggagttcaagagtcttggactcaattcttaaaaattagttttc 19357981  T
Q  441 agaatcttca 450  Q
    || |||||||    
T  19357982 aggatcttca 19357991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 222 - 403
Target Start/End: Complemental strand, 19637434 - 19637253
Alignment:
Q  222 aatttgtgattatctcacttgatcttcgtacagagacatacaaacaattgcttctacctcgtggtgttgatgaagttccatatgttgaaccaactattgc 321  Q
    |||||||||| || || |||||| |  |||||||| |||||   |||||||| |  ||||| ||| ||||| ||||| ||| |||| |||||||| |||     
T  19637434 aatttgtgatcatttcgcttgatttgagtacagaggcatactgtcaattgctgccccctcgaggttttgataaagtttcatgtgttcaaccaactcttgt 19637335  T
Q  322 tgtgttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagtt 403  Q
    ||||||| |||||| ||| || || |||||  || | ||  ||||| |||||||||||||||| |||| |||||||||||||    
T  19637334 tgtgttgctggactccctttgcttgtctcatgattttaatggaactgattttattatatggcaaatgaaggaatttggagtt 19637253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 369 - 450
Target Start/End: Complemental strand, 29431071 - 29430990
Alignment:
Q  369 attttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaattagttttcagaatcttca 450  Q
    ||||| ||||||||| ||||||| ||||||| | | || | |||||||||||||||||||||||||||| |||| |||||||    
T  29431071 attttgttatatggcggatgatgaaatttggggctaaagattcttggacccaattccttaaaattagttatcaggatcttca 29430990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 369 - 450
Target Start/End: Complemental strand, 29454173 - 29454092
Alignment:
Q  369 attttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaattagttttcagaatcttca 450  Q
    ||||| ||||||||| ||||||| |||||||||||||| | |||||||| |||||| |||||||||||| |||  |||||||    
T  29454173 attttgttatatggcggatgatgaaatttggagttgaagattcttggactcaattctttaaaattagttatcaagatcttca 29454092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 375 - 450
Target Start/End: Original strand, 29859460 - 29859535
Alignment:
Q  375 ttatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaattagttttcagaatcttca 450  Q
    |||||||| |||||| | |||||||||||||| | |||||||||| ||| ||||||||||||| ||| ||||||||    
T  29859460 ttatatgggagatgaagaaatttggagttgaagattcttggaccccatttcttaaaattagttatcacaatcttca 29859535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 19645498 - 19645433
Alignment:
Q  627 aggattatgctgaaagtttggtttcaattcgttgaaagtgagtttcttcatgatgagttacttgtt 692  Q
    ||||||||| ||||||||||||||||| | ||||||||| |||||||| || |||| |||||||||    
T  19645498 aggattatgttgaaagtttggtttcaacttgttgaaagtaagtttctttattatgatttacttgtt 19645433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 369 - 446
Target Start/End: Original strand, 19722018 - 19722095
Alignment:
Q  369 attttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaattagttttcagaatc 446  Q
    ||||| || ||||| |||||||||||||||||||| || | |||||||| |||||||| ||||| |||||| ||||||    
T  19722018 attttgttttatggaagatgatggaatttggagttcaagattcttggactcaattcctcaaaatcagtttttagaatc 19722095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 341 - 445
Target Start/End: Original strand, 22100465 - 22100569
Alignment:
Q  341 tgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaattagttttc 440  Q
    |||||||||||  || |||| | ||||||||||||||||||||| |||| | ||||||||||| || | |||||||| || ||  | |||||||||| ||    
T  22100465 tgtttttctcatgatttcaaaaaaactcattttattatatggcaaatgaagaaatttggagttcaagagtcttggactcagttattcaaaattagttatc 22100564  T
Q  441 agaat 445  Q
    |||||    
T  22100565 agaat 22100569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 392 - 450
Target Start/End: Complemental strand, 18514834 - 18514776
Alignment:
Q  392 gaatttggagttgaacaatcttggacccaattccttaaaattagttttcagaatcttca 450  Q
    ||||||||||||||| | |||||||| ||||||||||||||||||| |  |||||||||    
T  18514834 gaatttggagttgaaaactcttggactcaattccttaaaattagttatatgaatcttca 18514776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 364 - 450
Target Start/End: Original strand, 29867231 - 29867317
Alignment:
Q  364 aactcattttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaattagttttcagaatcttca 450  Q
    |||| |||||||||||||||| |||| | |||| || |||||| | |||||||| |||||||||| ||||||||  || ||||||||    
T  29867231 aactgattttattatatggcaaatgaagaaattcggggttgaagattcttggactcaattccttagaattagttaccataatcttca 29867317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 364 - 450
Target Start/End: Original strand, 29874506 - 29874592
Alignment:
Q  364 aactcattttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaattagttttcagaatcttca 450  Q
    |||| |||| ||||||||||| |||| | ||||||| |||||| | |||||||| | ||| ||||||||||||| ||| ||||||||    
T  29874506 aactgatttcattatatggcaaatgaagaaatttggggttgaagattcttggactccattacttaaaattagttatcaaaatcttca 29874592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 375 - 448
Target Start/End: Original strand, 9807830 - 9807903
Alignment:
Q  375 ttatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaattagttttcagaatctt 448  Q
    ||||||||||||||| |||||||||||||||| | |||||||   || |||||| ||||| || ||||||||||    
T  9807830 ttatatggcagatgaaggaatttggagttgaagagtcttggatgaaactccttacaattaattatcagaatctt 9807903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 369 - 430
Target Start/End: Original strand, 20414882 - 20414943
Alignment:
Q  369 attttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaa 430  Q
    |||||||||||||| |||||||| ||||||||| |||  | |||||||| ||||||||||||    
T  20414882 attttattatatggaagatgatgaaatttggagatgacaagtcttggactcaattccttaaa 20414943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 364 - 449
Target Start/End: Complemental strand, 29922068 - 29921983
Alignment:
Q  364 aactcattttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaattagttttcagaatcttc 449  Q
    |||| ||||| ||||||||||||||| | ||||||| | |||| | |||||| | |||||||||| |||||||| ||| |||||||    
T  29922068 aactgattttgttatatggcagatgaagaaatttggggatgaagattcttggtctcaattccttagaattagttatcaaaatcttc 29921983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 386 - 450
Target Start/End: Complemental strand, 6864860 - 6864796
Alignment:
Q  386 atgatggaatttggagttgaacaatcttggacccaattccttaaaattagttttcagaatcttca 450  Q
    |||| |||||||||||||||| | |||||||| || |||||||||| ||||| ||| ||||||||    
T  6864860 atgaaggaatttggagttgaagagtcttggactcagttccttaaaactagttatcataatcttca 6864796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 341 - 417
Target Start/End: Original strand, 22070083 - 22070159
Alignment:
Q  341 tgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaacaatcttggac 417  Q
    |||||||||||  || ||||  |||||||||||||||||||||| |||| | ||||||||||| || | ||||||||    
T  22070083 tgtttttctcatgatttcaaacgaactcattttattatatggcaaatgaagcaatttggagttcaagagtcttggac 22070159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 322 - 441
Target Start/End: Original strand, 22028581 - 22028700
Alignment:
Q  322 tgtgttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaacaatcttggacccaa 421  Q
    |||||||||||| ||||| ||||||||| |     |||||  ||| |||||| |||||||| | |||| ||| | |||||||||| | |||||||| |||    
T  22028581 tgtgttgatggattgcctttgtttttctgaagtggtcaaggaaacccattttgttatatggaaaatgacggattatggagttgaagagtcttggactcaa 22028680  T
Q  422 ttccttaaaattagttttca 441  Q
    || ||||| |||||||||||    
T  22028681 ttacttaagattagttttca 22028700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 447
Target Start/End: Original strand, 22080863 - 22080946
Alignment:
Q  364 aactcattttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaattagttttcagaatct 447  Q
    ||||||||||||||||||||| |||| | ||||||||||| || | |||||||| |  ||  | |||||||||| |||||||||    
T  22080863 aactcattttattatatggcaaatgaagcaatttggagttcaagagtcttggactcggttattcaaaattagttatcagaatct 22080946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 304 - 442
Target Start/End: Original strand, 19779537 - 19779675
Alignment:
Q  304 tgttgaaccaactattgctgtgttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagtt 403  Q
    |||||| ||| || || |||| |||||||| || || ||||||||||||| |  ||||   || |||||| || |||||  ||||||||| |  ||||||    
T  19779537 tgttgatccagctgttactgtattgatggattgtctatgtttttctcaccgttccaaggagacccattttgttttatggttgatgatggagtacggagtt 19779636  T
Q  404 gaacaatcttggacccaattccttaaaattagttttcag 442  Q
     || | |||||||| |||||||| |||||||||||||||    
T  19779637 caagactcttggactcaattcctcaaaattagttttcag 19779675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 304 - 442
Target Start/End: Complemental strand, 19887846 - 19887708
Alignment:
Q  304 tgttgaaccaactattgctgtgttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagtt 403  Q
    |||||| ||| || || |||| |||||||| || || ||||||||||||| |  ||||   || |||||| || |||||  ||||||||| |  ||||||    
T  19887846 tgttgatccagctgttactgtattgatggattgtctatgtttttctcaccgttccaaggagacccattttgttttatggttgatgatggagtacggagtt 19887747  T
Q  404 gaacaatcttggacccaattccttaaaattagttttcag 442  Q
     || | |||||||| |||||||| |||||||||||||||    
T  19887746 caagactcttggactcaattcctcaaaattagttttcag 19887708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 222 - 276
Target Start/End: Complemental strand, 22473369 - 22473315
Alignment:
Q  222 aatttgtgattatctcacttgatcttcgtacagagacatacaaacaattgcttct 276  Q
    ||||| ||||||| || ||||||||  |||||||||||||||||||| |||||||    
T  22473369 aatttatgattatatctcttgatctaggtacagagacatacaaacaaatgcttct 22473315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 18953207 - 18953166
Alignment:
Q  137 gtgtatttgagtggcactgttaactggtttgccattagaaac 178  Q
    |||||| |||||||||||||||||||||| |||||| |||||    
T  18953207 gtgtatgtgagtggcactgttaactggttggccattcgaaac 18953166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 18983254 - 18983213
Alignment:
Q  137 gtgtatttgagtggcactgttaactggtttgccattagaaac 178  Q
    |||||| |||||||||||||||||||||| |||||| |||||    
T  18983254 gtgtatgtgagtggcactgttaactggttggccattcgaaac 18983213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 435
Target Start/End: Complemental strand, 21218825 - 21218712
Alignment:
Q  322 tgtgttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaacaatcttggacccaa 421  Q
    |||||||||| ||| | | ||||||| |||| || ||||  ||||| ||||  |||||||||| |||| ||||||||||| |||  | |||||||| |||    
T  21218825 tgtgttgatgaactccttttgtttttatcacgatttcaatggaactgatttggttatatggcaaatgacggaatttggagatgataagtcttggactcaa 21218726  T
Q  422 ttccttaaaattag 435  Q
    ||||| ||| ||||    
T  21218725 ttcctcaaatttag 21218712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 118; Significance: 9e-60; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 206 - 545
Target Start/End: Original strand, 53790381 - 53790732
Alignment:
Q  206 gatattactgttgagcaatttgtgattatctcacttgatcttcgtacagagacatacaaacaattgcttctacctcgtggtgttgatga---------ag 296  Q
    |||| |||| ||||||||| | |||||||||  ||||||||| |||| |||||||||||||||||||  |  |||||||||| || ||          ||    
T  53790381 gatactactcttgagcaatatatgattatcttgcttgatcttggtacggagacatacaaacaattgcagcctcctcgtggtgatggtgttaatttagtag 53790480  T
Q  297 ttccatatgttgaaccaactattgctgtgttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatt 396  Q
    |||||  | |||| |||||||||||||| || ||||| ||  | |||||||||||| || | |||||||||||||||||||||||| ||||||   ||||    
T  53790481 ttccacgttttgagccaactattgctgtcttaatggattgtttgtgtttttctcactatgttaagagaactcattttattatatggaagatgacaaaatt 53790580  T
Q  397 tggagttgaacaatcttggacccaattccttaaaattagttttcagaatcttcatgtagatgctaggtttagtgactggagtaattatca---atttatg 493  Q
    |||| |||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||  ||  ||||||||||||| | | |||||   |||||||    
T  53790581 tggatttgaacaatcttggactcaatttcttaaaattagttttcagaatcttcaagtagataataattttagtgactggaatcagtatcagacatttatg 53790680  T
Q  494 ttcccattgtgtctttctaagaatggtgatacactgatataggcaggctctc 545  Q
    |||||||||||||||||| |||||||||| |||||||||| |||| ||||||    
T  53790681 ttcccattgtgtctttctgagaatggtgagacactgatattggcaagctctc 53790732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 364 - 448
Target Start/End: Original strand, 53774835 - 53774919
Alignment:
Q  364 aactcattttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaattagttttcagaatctt 448  Q
    |||||||||| |||||||||| |||| |||||||||||||||| | |||||||| ||||||||||||||||||| ||||||||||    
T  53774835 aactcattttgttatatggcaaatgaaggaatttggagttgaagagtcttggactcaattccttaaaattagttatcagaatctt 53774919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 311 - 450
Target Start/End: Original strand, 3565686 - 3565825
Alignment:
Q  311 ccaactattgctgtgttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaacaat 410  Q
    |||||| ||| |||||||| ||||||||| ||||||||| |   |   |||| |||  ||||||||||||||||||||| ||||||||| |||||| | |    
T  3565686 ccaactgttggtgtgttgagggactgcctttgtttttcttattgttataagaaaaccgattttattatatggcagatgaaggaatttggggttgaagagt 3565785  T
Q  411 cttggacccaattccttaaaattagttttcagaatcttca 450  Q
    ||||||| ||||| ||||||||||||| |||  |||||||    
T  3565786 cttggactcaatttcttaaaattagttatcatgatcttca 3565825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 364 - 450
Target Start/End: Complemental strand, 11971057 - 11970971
Alignment:
Q  364 aactcattttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaattagttttcagaatcttca 450  Q
    |||||||||| |||||||||| |||| |||||||||||| ||| | |||||||| ||||| |||| |||||||| ||| ||||||||    
T  11971057 aactcattttgttatatggcaaatgaaggaatttggagtggaagagtcttggactcaatttcttagaattagttatcataatcttca 11970971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 369 - 450
Target Start/End: Original strand, 3557726 - 3557807
Alignment:
Q  369 attttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaattagttttcagaatcttca 450  Q
    |||||||||||||||| |||| ||||||||| |||||| | |||||||| ||||| ||||||||||||| |||  |||||||    
T  3557726 attttattatatggcatatgaaggaatttggggttgaagagtcttggactcaatttcttaaaattagttatcatgatcttca 3557807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 326 - 445
Target Start/End: Complemental strand, 8443567 - 8443448
Alignment:
Q  326 ttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaacaatcttggacccaattcc 425  Q
    ||||||||||| || ||||||||| |  || ||||||||||||||| | |||| |||||||||| ||| ||||||||| |  | |||||||  |||||      
T  8443567 ttgatggactgtctttgtttttcttatgatttcaagagaactcattatgttatttggcagatgaaggattttggagttcacgagtcttggattcaattat 8443468  T
Q  426 ttaaaattagttttcagaat 445  Q
    |||||||||||| |||||||    
T  8443467 ttaaaattagttatcagaat 8443448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 364 - 450
Target Start/End: Complemental strand, 11981758 - 11981672
Alignment:
Q  364 aactcattttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaattagttttcagaatcttca 450  Q
    |||||||||| |||||||||| |||| |||||||||||| ||| | || ||||| | ||| ||||||||||||| ||  ||||||||    
T  11981758 aactcattttgttatatggcaaatgaaggaatttggagtggaagagtcctggactcgatttcttaaaattagttatcttaatcttca 11981672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 369 - 450
Target Start/End: Complemental strand, 3561028 - 3560947
Alignment:
Q  369 attttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaattagttttcagaatcttca 450  Q
    |||||||||| ||||||||||   ||||||| |||||| | |||||||| ||||| ||||||||||||| |||  |||||||    
T  3561028 attttattatttggcagatgaaaaaatttggggttgaagagtcttggactcaatttcttaaaattagttatcatgatcttca 3560947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 497 - 538
Target Start/End: Original strand, 10482312 - 10482353
Alignment:
Q  497 ccattgtgtctttctaagaatggtgatacactgatataggca 538  Q
    |||||||||||||||||||||||||||||||| |||| ||||    
T  10482312 ccattgtgtctttctaagaatggtgatacactaatattggca 10482353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 363 - 434
Target Start/End: Original strand, 35767012 - 35767083
Alignment:
Q  363 gaactcattttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaatta 434  Q
    ||||||||||| |||||||| |||||   ||||||||||||||| | |||||||  ||| ||||||||||||    
T  35767012 gaactcattttgttatatggaagatggaagaatttggagttgaagagtcttggattcaactccttaaaatta 35767083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 372 - 430
Target Start/End: Complemental strand, 1686352 - 1686294
Alignment:
Q  372 ttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaa 430  Q
    |||||||||||||||||| ||||||||| |||||  | |||||||| ||||| ||||||    
T  1686352 ttattatatggcagatgaaggaatttggcgttgacgagtcttggactcaatttcttaaa 1686294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 627 - 681
Target Start/End: Original strand, 53790823 - 53790877
Alignment:
Q  627 aggattatgctgaaagtttggtttcaattcgttgaaagtgagtttcttcatgatg 681  Q
    ||||||||| ||||||||||| ||||||||||||||||  |||| ||| ||||||    
T  53790823 aggattatgttgaaagtttggcttcaattcgttgaaaggaagttcctttatgatg 53790877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 5e-46; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 307 - 457
Target Start/End: Complemental strand, 29597684 - 29597534
Alignment:
Q  307 tgaaccaactattgctgtgttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaa 406  Q
    |||||||||||||||||| ||| ||||| |||| ||||||||||||||| |||||  |||||||||| |||||||||| ||||| |||||||||||||||    
T  29597684 tgaaccaactattgctgttttgctggaccgcctttgtttttctcaccatttcaaggaaactcattttgttatatggcaaatgattgaatttggagttgaa 29597585  T
Q  407 caatcttggacccaattccttaaaattagttttcagaatcttcatgtagat 457  Q
    ||||||||||| ||||||||||||||||||||||| ||||| || ||||||    
T  29597584 caatcttggactcaattccttaaaattagttttcaaaatctacaggtagat 29597534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 299 - 447
Target Start/End: Original strand, 29647606 - 29647754
Alignment:
Q  299 ccatatgttgaaccaactattgctgtgttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttg 398  Q
    |||||| |||||||||||||||||   |||||||| ||||| ||||||||||||||||| |||| |||||||||| |||||||||| ||||| |||||||    
T  29647606 ccatatattgaaccaactattgctactttgatggattgcctttgtttttctcaccatcttaagaaaactcattttgttatatggcaaatgatagaatttg 29647705  T
Q  399 gagttgaacaatcttggacccaattccttaaaattagttttcagaatct 447  Q
    || |||||||||||||||| ||||||||||||||||||||||| |||||    
T  29647706 gatttgaacaatcttggactcaattccttaaaattagttttcaaaatct 29647754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 307 - 447
Target Start/End: Original strand, 29642297 - 29642437
Alignment:
Q  307 tgaaccaactattgctgtgttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaa 406  Q
    ||||||||||||||||   || |||||  |||| ||||||||||||||||  |||| |||||||||  |||||||||| ||||| ||||||||| |||||    
T  29642297 tgaaccaactattgctactttcatggatcgcctttgtttttctcaccatcgtaagaaaactcatttcgttatatggcaaatgatagaatttggatttgaa 29642396  T
Q  407 caatcttggacccaattccttaaaattagttttcagaatct 447  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  29642397 caatcttggactcaattccttaaaattagttttcagaatct 29642437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 364 - 450
Target Start/End: Complemental strand, 18964905 - 18964819
Alignment:
Q  364 aactcattttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaattagttttcagaatcttca 450  Q
    ||||||||| ||||||||||| |||| |||||||||||||||| | |||||||| ||||| ||||||||| ||| ||||||||||||    
T  18964905 aactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttca 18964819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 611 - 727
Target Start/End: Complemental strand, 29821026 - 29820910
Alignment:
Q  611 atgtggtgtttttgcgaggattatgctgaaagtttggtttcaattcgttgaaagtgagtttcttcatgatgagttacttgttcgactttatttgaattaa 710  Q
    ||||||||||||| | ||||||||| ||||||||| | ||  ||| ||||||||| |||||||| |  |||| |||||||||||| |||||||||||| |    
T  29821026 atgtggtgtttttccaaggattatgttgaaagtttagcttggatttgttgaaagtaagtttctttacaatgatttacttgttcgaatttatttgaattca 29820927  T
Q  711 tgtacgttgttttgaaa 727  Q
    |||| ||| ||||||||    
T  29820926 tgtatgttattttgaaa 29820910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 613 - 727
Target Start/End: Original strand, 29642597 - 29642711
Alignment:
Q  613 gtggtgtttttgcgaggattatgctgaaagtttggtttcaattcgttgaaagtgagtttcttcatgatgagttacttgttcgactttatttgaattaatg 712  Q
    |||||||| || | ||||||||| ||||||||||| ||  ||| ||||||||| |||||||| |  |||| |||||||||| | |||||||||||| |||    
T  29642597 gtggtgttattccaaggattatgttgaaagtttggcttggatttgttgaaagtaagtttctttacaatgatttacttgttcaaatttatttgaattcatg 29642696  T
Q  713 tacgttgttttgaaa 727  Q
    || ||| ||||||||    
T  29642697 tatgttattttgaaa 29642711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 306 - 450
Target Start/End: Complemental strand, 28764035 - 28763894
Alignment:
Q  306 ttgaaccaactattgctgtgttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttga 405  Q
    |||| |||| |||||| ||||||||||||||||| |||||| |||| || || |  ||||| |||||| |||||||| |||||| | |||||||||||||    
T  28764035 ttgagccaattattgcagtgttgatggactgcctttgttttgctcatca-ctta--agaacccattttgttatatggaagatgacgcaatttggagttga 28763939  T
Q  406 acaatcttggacccaattccttaaaattagttttcagaatcttca 450  Q
    | | |||||||  | |||||| ||||| || | |||| |||||||    
T  28763938 aaagtcttggagtcgattcctcaaaatcagctatcaggatcttca 28763894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 613 - 706
Target Start/End: Complemental strand, 29597390 - 29597298
Alignment:
Q  613 gtggtgtttttgcgaggattatgctgaaagtttggtttcaattcgttgaaagtgagtttcttcatgatgagttacttgttcgactttatttgaa 706  Q
    |||||||| || | ||||||||| ||||||||||| ||| ||| ||||||||| || ||||| |  |||| |||||||||||| ||||||||||    
T  29597390 gtggtgttattccaaggattatgttgaaagtttggcttcgatttgttgaaagtaag-ttctttagaatgatttacttgttcgaatttatttgaa 29597298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 263
Target Start/End: Complemental strand, 29597787 - 29597734
Alignment:
Q  210 ttactgttgagcaatttgtgattatctcacttgatcttcgtacagagacataca 263  Q
    ||||||||||| |||||||||||||||| |||||||||  ||| ||||||||||    
T  29597787 ttactgttgagaaatttgtgattatctcgcttgatcttgctactgagacataca 29597734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 216 - 246
Target Start/End: Complemental strand, 18965056 - 18965026
Alignment:
Q  216 ttgagcaatttgtgattatctcacttgatct 246  Q
    |||||||||||||||||||||||||||||||    
T  18965056 ttgagcaatttgtgattatctcacttgatct 18965026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 29647324 - 29647398
Alignment:
Q  1 aacttataaggtcgtcattttgtcttctagagaggtccacgttttcagtttgggtgataatatttggagaaaaat 75  Q
    ||||||||| | |||  |||||| |||||| |||||  | |||||| |||| |||||||||||||||||||||||    
T  29647324 aacttataatgccgtggttttgtgttctagtgaggtgaaagttttccgtttcggtgataatatttggagaaaaat 29647398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 348
Target Start/End: Complemental strand, 3234167 - 3234026
Alignment:
Q  207 atattactgttgagcaatttgtgattatctcacttgatcttcgtacagagacatacaaacaattgcttctacctcgtggtgttgatgaagttccatatgt 306  Q
    ||||| || ||||||||| ||||||||| |||||| ||||  ||| | ||||||||||| | |||||||| ||||  ||| ||||| |||| |||| | |    
T  3234167 atattccttttgagcaatatgtgattatttcactttatctgagtaaacagacatacaaagagttgcttcttcctcaaggttttgatcaagtgccatgttt 3234068  T
Q  307 tgaaccaactattgctgtgttgatggactgcctctgtttttc 348  Q
    ||| ||| || |   ||| |||||||| |||||||| |||||    
T  3234067 tgagccatctctatgtgttttgatggattgcctctgcttttc 3234026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 29597955 - 29597898
Alignment:
Q  18 ttttgtcttctagagaggtccacgttttcagtttgggtgataatatttggagaaaaat 75  Q
    |||||| |||||| |||||  | |||||| |||| |||||||||||||||||||||||    
T  29597955 ttttgtgttctagggaggtgaaagttttccgtttcggtgataatatttggagaaaaat 29597898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 2e-30; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 203 - 451
Target Start/End: Complemental strand, 18913793 - 18913545
Alignment:
Q  203 aatgatattactgttgagcaatttgtgattatctcacttgatcttcgtacagagacatacaaacaattgcttctacctcgtggtgttgatgaagttccat 302  Q
    |||||||||||  |||| |||||||||||  |||| |||||| |   ||||||||||||| |||| ||| | | |||| | ||| ||| |||||  |||     
T  18913793 aatgatattaccattgaacaatttgtgatagtctcgcttgatttggctacagagacataccaacagttgttgccacctagcggttttgttgaagcaccac 18913694  T
Q  303 atgttgaaccaactattgctgtgttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagt 402  Q
      ||||||||  || ||  |||||||||||| || || ||||||||||||| | ||| | |||| |||||| |||||||| |||||||||||||||||||    
T  18913693 ccgttgaaccgtctgttagtgtgttgatggattgtctatgtttttctcaccgtttcaggggaacccattttgttatatggaagatgatggaatttggagt 18913594  T
Q  403 tgaacaatcttggacccaattccttaaaattagttttcagaatcttcat 451  Q
    | || | |||||||| |||||||| |||||||||||||| |||||||||    
T  18913593 tcaagagtcttggactcaattcctcaaaattagttttcaaaatcttcat 18913545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 203 - 451
Target Start/End: Complemental strand, 18909045 - 18908797
Alignment:
Q  203 aatgatattactgttgagcaatttgtgattatctcacttgatcttcgtacagagacatacaaacaattgcttctacctcgtggtgttgatgaagttccat 302  Q
    |||||||||||| |  | |||||||||||  |||| |||||| |   ||||||||||||    |||||||| | |||| | ||| ||| |||||| |||     
T  18909045 aatgatattactatcaaacaatttgtgatagtctcgcttgatttggatacagagacatatcggcaattgctgccacctagcggttttgttgaagtaccac 18908946  T
Q  303 atgttgaaccaactattgctgtgttgatggactgcctctgtttttctcaccatctcaagagaa-ctcattttattatatggcagatgatggaatttggag 401  Q
     |||||||||  || ||  |||||||||||| || || ||||||||||||| | | | ||||| | |||||| |||||||| ||||||||||||||||||    
T  18908945 ctgttgaaccgtctgttagtgtgttgatggattgtctatgtttttctcaccgtttta-gagaaacccattttgttatatggaagatgatggaatttggag 18908847  T
Q  402 ttgaacaatcttggacccaattccttaaaattagttttcagaatcttcat 451  Q
    || || | |||||||| |||||||| |||||||||||||| |||||||||    
T  18908846 ttcaagagtcttggactcaattcctcaaaattagttttcaaaatcttcat 18908797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 203 - 451
Target Start/End: Complemental strand, 18921001 - 18920753
Alignment:
Q  203 aatgatattactgttgagcaatttgtgattatctcacttgatcttcgtacagagacatacaaacaattgcttctacctcgtggtgttgatgaagttccat 302  Q
    |||||||||||| |  | |||||||||||  |||| |||||| |   ||||||||||||    |||||||| | |||| | ||| ||| |||||| |||     
T  18921001 aatgatattactatcaaacaatttgtgatagtctcgcttgatttggttacagagacatatcggcaattgctgccacctagcggttttgttgaagtaccac 18920902  T
Q  303 atgttgaaccaactattgctgtgttgatggactgcctctgtttttctcaccatctcaagagaa-ctcattttattatatggcagatgatggaatttggag 401  Q
     |||||||||  || ||  |||||||||||| ||  | ||||||||||||| | | | ||||| | |||||| |||||||| ||||||||||||||||||    
T  18920901 ctgttgaaccgtctgttagtgtgttgatggattgtatatgtttttctcaccgtttta-gagaaacccattttgttatatggaagatgatggaatttggag 18920803  T
Q  402 ttgaacaatcttggacccaattccttaaaattagttttcagaatcttcat 451  Q
    || || | |||||||| |||||||| |||||||||||||| |||||||||    
T  18920802 ttcaagagtcttggactcaattcctcaaaattagttttcaaaatcttcat 18920753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 321 - 450
Target Start/End: Original strand, 14514852 - 14514981
Alignment:
Q  321 ctgtgttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaacaatcttggaccca 420  Q
    ||||||| | ||||||| | ||||||||| |  || |||||| ||| ||| || |||||||| | |||   ||||||||||||||| | |||||||| ||    
T  14514852 ctgtgttaagggactgcatgtgtttttcttatgatttcaagaaaacccatcttgttatatggaaaatggatgaatttggagttgaagattcttggactca 14514951  T
Q  421 attccttaaaattagttttcagaatcttca 450  Q
    ||||||||||||||||| |  |||||||||    
T  14514952 attccttaaaattagttatatgaatcttca 14514981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 341 - 437
Target Start/End: Original strand, 554448 - 554544
Alignment:
Q  341 tgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaattagtt 437  Q
    |||||||||||| || |  || |||| ||| ||||||||||||| ||||| |||| ||||||| || | |||||||| ||||| |||||||||||||    
T  554448 tgtttttctcacgattttgagggaacccatcttattatatggcaaatgatagaatatggagttaaagagtcttggactcaattacttaaaattagtt 554544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 358 - 416
Target Start/End: Original strand, 20975547 - 20975605
Alignment:
Q  358 caagagaactcattttattatatggcagatgatggaatttggagttgaacaatcttgga 416  Q
    |||| ||| ||||||| |||||||||| |||| |||||||||||||||| | |||||||    
T  20975547 caagggaaatcattttgttatatggcaaatgagggaatttggagttgaagattcttgga 20975605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 275
Target Start/End: Original strand, 20967541 - 20967606
Alignment:
Q  210 ttactgttgagcaatttgtgattatctcacttgatcttcgtacagagacatacaaacaattgcttc 275  Q
    |||||||||||||||||||||| || || |||||| |  | |||||||| |||| |||||||||||    
T  20967541 ttactgttgagcaatttgtgatcatttcccttgatttggggacagagacctacacacaattgcttc 20967606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 2e-20; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 207 - 450
Target Start/End: Complemental strand, 4366727 - 4366484
Alignment:
Q  207 atattactgttgagcaatttgtgattatctcacttgatcttcgtacagagacatacaaacaattgcttctacctcgtggtgttgatgaagttccatatgt 306  Q
    ||||||| |||||||||||||| ||| | || ||||||||  |||||||||||||||| ||||   | || ||||||||| |||| ||||| |||  |      
T  4366727 atattaccgttgagcaatttgttattgtttcgcttgatctgggtacagagacatacaatcaatacttgctgcctcgtggttttgaagaagtgccacctac 4366628  T
Q  307 tgaaccaactattgctgtgttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaa 406  Q
    |||||||||  ||| |||||||  ||||||||| ||||||||| |   |  ||||| |||| ||||| || |||||||||||| | |||| || ||||||    
T  4366627 tgaaccaacagttggtgtgttgggggactgcctttgtttttcttattcttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaa 4366528  T
Q  407 caatcttggacccaattccttaaaattagttttcagaatcttca 450  Q
     | |||||||| | ||| |||||| ||||||  |||||||||||    
T  4366527 gagtcttggactccatttcttaaagttagttaccagaatcttca 4366484  T

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Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 364 - 450
Target Start/End: Complemental strand, 39379136 - 39379050
Alignment:
Q  364 aactcattttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaattagttttcagaatcttca 450  Q
    |||| ||||||||||||||||||||| ||||||||| |||||| | |||||||| ||||| |||||||| |||| |||  |||||||    
T  39379136 aactgattttattatatggcagatgaaggaatttggggttgaagagtcttggactcaatttcttaaaatcagttatcatgatcttca 39379050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 375 - 437
Target Start/End: Complemental strand, 4015029 - 4014967
Alignment:
Q  375 ttatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaattagtt 437  Q
    ||||||||||||||| | ||||||| |||||| | |||||||| |||||||||||| ||||||    
T  4015029 ttatatggcagatgaagaaatttggggttgaagattcttggactcaattccttaaagttagtt 4014967  T

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Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 364 - 437
Target Start/End: Original strand, 4570922 - 4570995
Alignment:
Q  364 aactcattttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaattagtt 437  Q
    |||| ||||| |||||||||| |||| | ||||||| |||||| | |||||||| ||||| |||||||||||||    
T  4570922 aactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagtt 4570995  T

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Target: scaffold0464 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 341 - 450
Target Start/End: Original strand, 8033 - 8142
Alignment:
Q  341 tgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaattagttttc 440  Q
    ||||||||||||| | ||||| |||| |||||| || |||||  |||||||||||| |||||| || | |||||||  ||||| || |||||||||||||    
T  8033 tgtttttctcaccgtttcaagggaacccattttgttttatggatgatgatggaattcggagttcaagattcttggattcaatttctcaaaattagttttc 8132  T
Q  441 agaatcttca 450  Q
    || |||||||    
T  8133 aggatcttca 8142  T

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Target: chr3 (Bit Score: 39; Significance: 0.000000000001; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 3625737 - 3625815
Alignment:
Q  372 ttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaattagttttcagaatcttca 450  Q
    ||||||||||||| |||| | ||||||| |||||| | |||||||| ||||| ||||||||||||| ||| ||||||||    
T  3625737 ttattatatggcaaatgaagaaatttggggttgaagagtcttggactcaatttcttaaaattagttatcaaaatcttca 3625815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 304 - 450
Target Start/End: Complemental strand, 12734925 - 12734779
Alignment:
Q  304 tgttgaaccaactattgctgtgttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagtt 403  Q
    |||||| ||| || || |||| ||||||||  | || ||||||||||||| | ||||| |||| |||||| || |||||  |||| ||||||| ||||||    
T  12734925 tgttgagccatctgttactgtattgatggatcgtctatgtttttctcaccgtttcaagggaacccattttgttttatggatgatgttggaattcggagtt 12734826  T
Q  404 gaacaatcttggacccaattccttaaaattagttttcagaatcttca 450  Q
     || | |||||||  ||||| || ||||||||||||||| |||||||    
T  12734825 caagattcttggattcaatttctcaaaattagttttcaggatcttca 12734779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 627 - 673
Target Start/End: Complemental strand, 25901088 - 25901042
Alignment:
Q  627 aggattatgctgaaagtttggtttcaattcgttgaaagtgagtttct 673  Q
    ||||||| | ||||||||||||||||| | |||||||||||||||||    
T  25901088 aggattacgttgaaagtttggtttcaactagttgaaagtgagtttct 25901042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 627 - 673
Target Start/End: Complemental strand, 25915106 - 25915060
Alignment:
Q  627 aggattatgctgaaagtttggtttcaattcgttgaaagtgagtttct 673  Q
    ||||||| | ||||||||||||||||| | |||||||||||||||||    
T  25915106 aggattacgttgaaagtttggtttcaactagttgaaagtgagtttct 25915060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 321 - 442
Target Start/End: Complemental strand, 32578983 - 32578862
Alignment:
Q  321 ctgtgttgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaacaatcttggaccca 420  Q
    ||||||||||||| || || ||||||||||||| | |||||   || |||||| || |||||  ||||||||| |  |||||| |  | |||||||| ||    
T  32578983 ctgtgttgatggattgtctatgtttttctcaccgtttcaaggagacccattttgttttatggatgatgatggagtacggagttcacgagtcttggactca 32578884  T
Q  421 attccttaaaattagttttcag 442  Q
    |||||| || ||||||||||||    
T  32578883 attcctcaagattagttttcag 32578862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 327 - 400
Target Start/End: Original strand, 36340073 - 36340146
Alignment:
Q  327 tgatggactgcctctgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttgga 400  Q
    ||||||||||||| || ||||| ||| || ||||||||||| | ||| | ||||||||||||| ||| ||||||    
T  36340073 tgatggactgcctttgcttttcacacgatttcaagagaactgaatttgtgatatggcagatgaaggagtttgga 36340146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0867 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0867
Description:

Target: scaffold0867; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 341 - 445
Target Start/End: Complemental strand, 4767 - 4663
Alignment:
Q  341 tgtttttctcaccatctcaagagaactcattttattatatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaattagttttc 440  Q
    |||||||||||  || |||| | ||||||||||||||||||||| |||| | ||||||||||| || | |||||||| || ||  | |||||||||| ||    
T  4767 tgtttttctcatgatttcaaaaaaactcattttattatatggcaaatgaagaaatttggagttcaagagtcttggactcagttattcaaaattagttatc 4668  T
Q  441 agaat 445  Q
    |||||    
T  4667 agaat 4663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 375 - 414
Target Start/End: Original strand, 29390292 - 29390331
Alignment:
Q  375 ttatatggcagatgatggaatttggagttgaacaatcttg 414  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  29390292 ttatatggcagatgagggaatttggagttgaagaatcttg 29390331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0354 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0354
Description:

Target: scaffold0354; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 377 - 450
Target Start/End: Original strand, 7471 - 7544
Alignment:
Q  377 atatggcagatgatggaatttggagttgaacaatcttggacccaattccttaaaattagttttcagaatcttca 450  Q
    |||||||| |||| |||||||||||||||  | ||||||   ||||||||||||||||| | || |||||||||    
T  7471 atatggcaaatgaaggaatttggagttgatgagtcttgggttcaattccttaaaattagctatcggaatcttca 7544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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