View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6003_high_6 (Length: 320)
Name: NF6003_high_6
Description: NF6003
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6003_high_6 |
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Alignment Details
Target: chr5 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 128 - 308
Target Start/End: Complemental strand, 12818810 - 12818630
Alignment:
| Q |
128 |
atcacttcaaaaccctaatttattaaaaccaaccaagaatttcacttcacttcttggaaatcctaaacttctctttctctcaattatttcttctccgaaa |
227 |
Q |
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| T |
12818810 |
atcacttcaaaaccctaatttattataaccaaccaagaatttcacttcacttcttggaaatcctaaacttctctttctctcaattatttcttcttcgaaa |
12818711 |
T |
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| Q |
228 |
ccctaactttcaaaatttcaatgtctgattcaaattcaccacgtggtgaacaagaacaagaacaaaaagagaatcaaatga |
308 |
Q |
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| T |
12818710 |
ccctaactttcaaaatttcaatgtctgattcaaattcaccacgtggtgaacaagaacaagaacaagaagagaatcaaatga |
12818630 |
T |
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