View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6003_high_7 (Length: 293)
Name: NF6003_high_7
Description: NF6003
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6003_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 15 - 278
Target Start/End: Original strand, 21482966 - 21483229
Alignment:
| Q |
15 |
aatatacagcttaagtccacaaacctgtctcctatcggatgcacttcgaccctggtgagaactctgtgtctgcatggtggggcggtcacggtccactgga |
114 |
Q |
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| T |
21482966 |
aatataaagctgaagtccacaaacctgtctcctatcggatgcacttcgaccctggtgagaactctgtgtctgcatggtggggcggtcacggtccactgga |
21483065 |
T |
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| Q |
115 |
ggctgcgtcggctcagccggaacaacaggtgccaaggaagctgctgtcccaccggtcatagtctgccaatacatccagttcgctggatttgcatgagaac |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21483066 |
ggctgcgtcggctcagccggaacaacaggtgccaaggaggctgctgtcccaccggtcatagtctgccaatacatccagttcgctggatttgcatgagaac |
21483165 |
T |
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| Q |
215 |
caccagcagcaacattggtgcaattatcaccactacctaatctcgcaagtggatcagaaccttg |
278 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
21483166 |
caccagcagcaacattggtgcaactatcaccactacctaatctcgcaagtggatcagaaccttg |
21483229 |
T |
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