View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6003_low_4 (Length: 473)

Name: NF6003_low_4
Description: NF6003
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6003_low_4
NF6003_low_4
[»] chr4 (81 HSPs)
chr4 (254-457)||(27079999-27080212)
chr4 (13-64)||(27080401-27080452)
chr4 (280-403)||(50038446-50038581)
chr4 (280-403)||(50045668-50045803)
chr4 (279-398)||(34595704-34595827)
chr4 (271-340)||(23511849-23511919)
chr4 (280-345)||(34166108-34166174)
chr4 (279-344)||(39754094-39754160)
chr4 (277-345)||(53508493-53508562)
chr4 (280-344)||(56420510-56420575)
chr4 (286-345)||(15133829-15133889)
chr4 (279-327)||(38224034-38224082)
chr4 (278-345)||(55229542-55229610)
chr4 (279-345)||(1945441-1945508)
chr4 (279-345)||(7695207-7695274)
chr4 (279-345)||(25856088-25856155)
chr4 (279-345)||(35207434-35207501)
chr4 (279-345)||(51394176-51394243)
chr4 (280-345)||(34709571-34709637)
chr4 (280-345)||(43635832-43635898)
chr4 (280-345)||(45861083-45861149)
chr4 (277-345)||(44639824-44639893)
chr4 (277-344)||(2994714-2994782)
chr4 (278-345)||(12721639-12721707)
chr4 (286-345)||(36235756-36235816)
chr4 (290-345)||(49573885-49573941)
chr4 (286-345)||(54569434-54569494)
chr4 (287-345)||(12721724-12721783)
chr4 (279-345)||(13743936-13744003)
chr4 (279-345)||(17659543-17659610)
chr4 (279-345)||(30051421-30051488)
chr4 (287-345)||(31860654-31860713)
chr4 (280-327)||(31914425-31914472)
chr4 (280-327)||(35207536-35207583)
chr4 (277-320)||(35967485-35967528)
chr4 (287-345)||(41788924-41788983)
chr4 (279-345)||(46779372-46779439)
chr4 (287-345)||(48079519-48079578)
chr4 (279-345)||(51126100-51126167)
chr4 (279-345)||(51126183-51126250)
chr4 (279-345)||(53551673-53551740)
chr4 (279-345)||(56420426-56420493)
chr4 (280-345)||(9011823-9011889)
chr4 (280-345)||(9968297-9968363)
chr4 (280-345)||(18592341-18592407)
chr4 (280-345)||(18592423-18592489)
chr4 (280-345)||(24156135-24156201)
chr4 (287-344)||(24331428-24331486)
chr4 (276-345)||(34827550-34827620)
chr4 (280-345)||(45861001-45861067)
chr4 (277-327)||(47628274-47628324)
chr4 (280-345)||(54677346-54677412)
chr4 (289-345)||(5289707-5289764)
chr4 (351-403)||(9968310-9968363)
chr4 (289-345)||(11583712-11583769)
chr4 (350-398)||(15133841-15133890)
chr4 (277-345)||(31808400-31808469)
chr4 (290-327)||(31914142-31914179)
chr4 (289-345)||(34321387-34321444)
chr4 (277-345)||(34709653-34709722)
chr4 (277-345)||(39466697-39466766)
chr4 (289-345)||(53176689-53176746)
chr4 (286-345)||(17028311-17028371)
chr4 (290-345)||(17659471-17659527)
chr4 (351-398)||(19754229-19754277)
chr4 (351-398)||(19785529-19785577)
chr4 (351-398)||(23329384-23329432)
chr4 (286-341)||(23511958-23512014)
chr4 (351-398)||(23754270-23754318)
chr4 (351-398)||(24529587-24529635)
chr4 (287-342)||(30016954-30017010)
chr4 (286-345)||(30279218-30279278)
chr4 (279-319)||(33811248-33811288)
chr4 (277-344)||(34321461-34321529)
chr4 (287-327)||(37306834-37306874)
chr4 (287-327)||(37381079-37381119)
chr4 (290-345)||(44639752-44639808)
chr4 (286-345)||(48088012-48088072)
chr4 (279-319)||(48950583-48950623)
chr4 (278-345)||(54927183-54927251)
chr4 (286-345)||(55501280-55501340)
[»] chr5 (66 HSPs)
chr5 (277-398)||(19784548-19784670)
chr5 (280-398)||(19784530-19784649)
chr5 (286-403)||(14064819-14064948)
chr5 (279-345)||(14571003-14571070)
chr5 (279-345)||(23042040-23042107)
chr5 (279-345)||(34102153-34102220)
chr5 (276-345)||(29807154-29807224)
chr5 (286-398)||(34399567-34399681)
chr5 (280-403)||(20207157-20207282)
chr5 (280-344)||(20361973-20362038)
chr5 (278-327)||(32146821-32146870)
chr5 (273-345)||(43585573-43585646)
chr5 (286-398)||(15965970-15966094)
chr5 (279-345)||(5226014-5226081)
chr5 (287-345)||(7336933-7336992)
chr5 (279-345)||(33696733-33696800)
chr5 (279-345)||(35969036-35969103)
chr5 (279-345)||(39126092-39126159)
chr5 (277-327)||(8694476-8694526)
chr5 (290-398)||(20207175-20207285)
chr5 (280-345)||(26168266-26168332)
chr5 (280-345)||(34186351-34186417)
chr5 (282-342)||(3161307-3161368)
chr5 (286-398)||(15385832-15385948)
chr5 (289-345)||(20367313-20367370)
chr5 (280-344)||(22474017-22474082)
chr5 (279-403)||(43585490-43585626)
chr5 (287-327)||(7581388-7581428)
chr5 (287-398)||(15385821-15385936)
chr5 (280-369)||(35245587-35245681)
chr5 (279-345)||(6168674-6168741)
chr5 (279-345)||(14064805-14064872)
chr5 (279-345)||(15965951-15966018)
chr5 (279-345)||(18942064-18942131)
chr5 (280-327)||(21369370-21369417)
chr5 (280-327)||(29255748-29255795)
chr5 (280-342)||(31947531-31947594)
chr5 (287-345)||(39916363-39916422)
chr5 (277-346)||(3780973-3781043)
chr5 (280-345)||(8618393-8618459)
chr5 (349-398)||(21152602-21152652)
chr5 (349-398)||(21159737-21159787)
chr5 (349-398)||(21163544-21163594)
chr5 (280-345)||(21344527-21344593)
chr5 (279-345)||(25596410-25596476)
chr5 (280-345)||(34186433-34186499)
chr5 (287-321)||(34733369-34733403)
chr5 (280-345)||(35245686-35245752)
chr5 (287-344)||(38007770-38007828)
chr5 (277-327)||(40428451-40428501)
chr5 (280-345)||(43340411-43340477)
chr5 (280-344)||(14274213-14274278)
chr5 (351-403)||(15966652-15966705)
chr5 (279-398)||(25713886-25714006)
chr5 (297-345)||(29807091-29807140)
chr5 (280-344)||(34102071-34102136)
chr5 (277-345)||(37684963-37685032)
chr5 (286-327)||(39916287-39916328)
chr5 (279-327)||(6638225-6638273)
chr5 (351-398)||(6638342-6638390)
chr5 (279-327)||(8694580-8694628)
chr5 (286-345)||(12891366-12891426)
chr5 (279-327)||(16067170-16067218)
chr5 (351-398)||(21163608-21163656)
chr5 (290-345)||(22584310-22584366)
chr5 (351-398)||(36964244-36964292)
[»] chr3 (54 HSPs)
chr3 (279-398)||(17940183-17940305)
chr3 (280-403)||(17940197-17940323)
chr3 (276-345)||(29076603-29076673)
chr3 (279-345)||(34935533-34935600)
chr3 (279-345)||(19678957-19679024)
chr3 (279-345)||(20547836-20547903)
chr3 (287-345)||(26043328-26043387)
chr3 (280-345)||(7933596-7933662)
chr3 (279-344)||(19679041-19679107)
chr3 (284-345)||(32589315-32589377)
chr3 (280-345)||(34413199-34413265)
chr3 (280-345)||(39333368-39333434)
chr3 (279-344)||(51256562-51256628)
chr3 (278-342)||(32998549-32998614)
chr3 (279-327)||(8126125-8126173)
chr3 (286-345)||(17005038-17005098)
chr3 (286-345)||(42595815-42595875)
chr3 (287-342)||(43351556-43351612)
chr3 (287-342)||(43898096-43898152)
chr3 (279-345)||(1927496-1927563)
chr3 (279-345)||(14626706-14626773)
chr3 (279-345)||(22995691-22995758)
chr3 (287-345)||(26770799-26770858)
chr3 (279-345)||(34205558-34205625)
chr3 (279-345)||(39148767-39148834)
chr3 (279-345)||(44435252-44435319)
chr3 (280-327)||(44687896-44687943)
chr3 (280-342)||(46739303-46739366)
chr3 (279-345)||(48895594-48895661)
chr3 (279-341)||(50623118-50623181)
chr3 (276-327)||(51256664-51256715)
chr3 (287-345)||(53717975-53718034)
chr3 (280-345)||(4236576-4236642)
chr3 (279-344)||(12569181-12569247)
chr3 (279-344)||(13545645-13545711)
chr3 (280-345)||(16894248-16894314)
chr3 (280-345)||(17004954-17005020)
chr3 (276-345)||(18480954-18481024)
chr3 (280-345)||(32827424-32827490)
chr3 (280-345)||(33638992-33639058)
chr3 (280-345)||(40326516-40326582)
chr3 (286-327)||(4979704-4979745)
chr3 (283-343)||(7328642-7328703)
chr3 (289-345)||(17501483-17501540)
chr3 (281-345)||(22995774-22995839)
chr3 (286-327)||(32956515-32956556)
chr3 (287-343)||(40628746-40628803)
chr3 (286-327)||(46843638-46843679)
chr3 (273-345)||(46967535-46967608)
chr3 (351-403)||(51486435-51486488)
chr3 (274-345)||(5790639-5790711)
chr3 (279-327)||(7672688-7672736)
chr3 (287-327)||(25245245-25245285)
chr3 (351-403)||(38446817-38446869)
[»] chr8 (28 HSPs)
chr8 (280-345)||(42631775-42631841)
chr8 (286-345)||(40716748-40716808)
chr8 (275-345)||(40802194-40802265)
chr8 (280-345)||(34194556-34194622)
chr8 (279-327)||(35201871-35201919)
chr8 (279-345)||(899241-899308)
chr8 (279-345)||(9203462-9203529)
chr8 (279-345)||(41178036-41178103)
chr8 (279-345)||(43484010-43484077)
chr8 (280-345)||(32480274-32480340)
chr8 (280-345)||(37922890-37922956)
chr8 (279-339)||(24726119-24726180)
chr8 (280-344)||(34194639-34194704)
chr8 (277-345)||(40739569-40739638)
chr8 (287-345)||(32484944-32485003)
chr8 (287-345)||(44838777-44838836)
chr8 (277-327)||(4786695-4786745)
chr8 (280-345)||(5526575-5526641)
chr8 (279-398)||(17911358-17911477)
chr8 (280-345)||(26492387-26492453)
chr8 (277-327)||(38815900-38815950)
chr8 (280-345)||(38883942-38884008)
chr8 (280-345)||(43483928-43483994)
chr8 (278-327)||(13832467-13832516)
chr8 (286-327)||(27184311-27184352)
chr8 (278-345)||(2827350-2827418)
chr8 (290-345)||(27781962-27782018)
chr8 (289-344)||(38884025-38884081)
[»] chr2 (49 HSPs)
chr2 (279-344)||(30202563-30202629)
chr2 (287-398)||(38262006-38262122)
chr2 (278-345)||(9157968-9158036)
chr2 (279-327)||(40669060-40669108)
chr2 (279-345)||(4898160-4898227)
chr2 (279-345)||(4945554-4945621)
chr2 (279-345)||(37486077-37486144)
chr2 (280-344)||(324792-324857)
chr2 (279-345)||(24971200-24971267)
chr2 (279-345)||(25668489-25668556)
chr2 (287-345)||(36490557-36490616)
chr2 (279-345)||(44402162-44402229)
chr2 (280-345)||(26567632-26567698)
chr2 (280-345)||(40340547-40340613)
chr2 (280-345)||(44949338-44949404)
chr2 (287-327)||(14937636-14937676)
chr2 (279-327)||(29573809-29573857)
chr2 (287-327)||(34438842-34438882)
chr2 (277-345)||(324874-324938)
chr2 (283-345)||(2795388-2795451)
chr2 (279-345)||(7728428-7728495)
chr2 (287-345)||(29771721-29771780)
chr2 (288-327)||(31211739-31211778)
chr2 (287-345)||(37485975-37486034)
chr2 (279-345)||(40340464-40340531)
chr2 (280-345)||(4898243-4898309)
chr2 (280-345)||(4945637-4945703)
chr2 (296-345)||(5094918-5094968)
chr2 (280-345)||(10041538-10041604)
chr2 (280-345)||(10099548-10099614)
chr2 (280-345)||(25668407-25668473)
chr2 (266-327)||(31596894-31596956)
chr2 (280-345)||(32473467-32473533)
chr2 (280-345)||(34911176-34911242)
chr2 (349-390)||(40320154-40320196)
chr2 (280-345)||(42230518-42230584)
chr2 (280-345)||(42579097-42579163)
chr2 (280-345)||(45123873-45123939)
chr2 (280-344)||(24971284-24971349)
chr2 (277-345)||(28680917-28680986)
chr2 (278-327)||(33363553-33363602)
chr2 (349-404)||(3463226-3463282)
chr2 (279-327)||(6006677-6006725)
chr2 (286-345)||(20195291-20195351)
chr2 (277-344)||(33150068-33150136)
chr2 (287-342)||(34438748-34438804)
chr2 (274-345)||(37131750-37131822)
chr2 (351-398)||(40739506-40739554)
chr2 (287-342)||(43514837-43514893)
[»] scaffold0172 (2 HSPs)
scaffold0172 (279-345)||(11662-11729)
scaffold0172 (291-345)||(11591-11646)
[»] chr7 (41 HSPs)
chr7 (279-345)||(7344976-7345043)
chr7 (279-344)||(20353156-20353222)
chr7 (286-398)||(3498296-3498420)
chr7 (280-347)||(46658808-46658876)
chr7 (286-398)||(5212057-5212169)
chr7 (287-345)||(35160752-35160811)
chr7 (287-345)||(43067027-43067086)
chr7 (280-345)||(25486794-25486860)
chr7 (280-345)||(28003256-28003322)
chr7 (279-344)||(46658727-46658793)
chr7 (285-345)||(19531954-19532015)
chr7 (277-345)||(27940823-27940892)
chr7 (286-341)||(45833272-45833328)
chr7 (286-344)||(4027220-4027279)
chr7 (279-345)||(5691554-5691621)
chr7 (287-345)||(20353060-20353119)
chr7 (280-327)||(24936677-24936724)
chr7 (279-345)||(33471485-33471552)
chr7 (279-345)||(34907660-34907727)
chr7 (279-345)||(37066177-37066244)
chr7 (279-345)||(48590580-48590647)
chr7 (280-345)||(27942403-27942469)
chr7 (280-345)||(33471568-33471634)
chr7 (280-345)||(34907743-34907809)
chr7 (277-327)||(35160846-35160896)
chr7 (280-345)||(37066260-37066326)
chr7 (296-398)||(46477145-46477259)
chr7 (280-398)||(46774544-46774659)
chr7 (351-403)||(13846719-13846772)
chr7 (277-345)||(32408170-32408239)
chr7 (286-327)||(43093514-43093555)
chr7 (278-327)||(48135460-48135509)
chr7 (279-327)||(7208659-7208707)
chr7 (274-345)||(14206408-14206480)
chr7 (274-345)||(14215098-14215170)
chr7 (279-327)||(25486711-25486759)
chr7 (286-345)||(31365646-31365706)
chr7 (286-345)||(38391895-38391955)
chr7 (351-398)||(40002763-40002811)
chr7 (351-398)||(43067038-43067086)
chr7 (286-345)||(45833192-45833252)
[»] chr6 (26 HSPs)
chr6 (280-398)||(11989160-11989286)
chr6 (274-345)||(7418865-7418937)
chr6 (279-345)||(2693740-2693807)
chr6 (276-345)||(3750279-3750349)
chr6 (280-345)||(10118614-10118680)
chr6 (280-345)||(10731551-10731617)
chr6 (280-398)||(11989142-11989268)
chr6 (280-345)||(32786194-32786260)
chr6 (279-350)||(383602-383674)
chr6 (279-403)||(7246879-7247002)
chr6 (279-345)||(10731468-10731535)
chr6 (287-345)||(12349893-12349952)
chr6 (290-344)||(19687473-19687528)
chr6 (279-345)||(21478548-21478615)
chr6 (279-345)||(22495574-22495641)
chr6 (279-345)||(26295369-26295436)
chr6 (287-345)||(31759402-31759461)
chr6 (279-345)||(33169260-33169327)
chr6 (280-345)||(3343773-3343839)
chr6 (280-345)||(3418834-3418900)
chr6 (280-345)||(19687545-19687611)
chr6 (280-345)||(26597243-26597309)
chr6 (280-345)||(29938346-29938412)
chr6 (279-344)||(31577518-31577584)
chr6 (279-321)||(32364119-32364161)
chr6 (286-345)||(12290947-12291007)
[»] chr1 (67 HSPs)
chr1 (280-345)||(15998207-15998273)
chr1 (280-345)||(16426904-16426970)
chr1 (280-345)||(37255204-37255270)
chr1 (280-344)||(7230005-7230070)
chr1 (349-404)||(6792426-6792482)
chr1 (286-345)||(52253540-52253600)
chr1 (279-345)||(6763412-6763479)
chr1 (279-345)||(37255121-37255188)
chr1 (280-345)||(435202-435268)
chr1 (277-342)||(4838304-4838370)
chr1 (280-345)||(5852684-5852750)
chr1 (280-345)||(38824369-38824435)
chr1 (280-345)||(38847380-38847446)
chr1 (280-345)||(39181045-39181111)
chr1 (279-344)||(40328951-40329017)
chr1 (280-345)||(46518023-46518089)
chr1 (280-345)||(47912568-47912634)
chr1 (280-344)||(21909920-21909985)
chr1 (277-345)||(34662398-34662467)
chr1 (280-344)||(40094407-40094472)
chr1 (277-345)||(45925322-45925391)
chr1 (279-327)||(29673799-29673847)
chr1 (277-398)||(42468869-42468990)
chr1 (291-345)||(3606268-3606323)
chr1 (279-345)||(4682932-4682999)
chr1 (279-345)||(9135596-9135663)
chr1 (279-345)||(26660639-26660706)
chr1 (279-345)||(34061938-34062005)
chr1 (280-327)||(39151803-39151850)
chr1 (279-345)||(39181129-39181196)
chr1 (279-345)||(40907174-40907241)
chr1 (287-345)||(45925247-45925306)
chr1 (280-345)||(4838387-4838453)
chr1 (280-345)||(4974123-4974189)
chr1 (280-345)||(12568515-12568580)
chr1 (279-321)||(24023360-24023402)
chr1 (277-327)||(26040477-26040527)
chr1 (280-345)||(27146102-27146168)
chr1 (280-345)||(31414834-31414900)
chr1 (280-345)||(31919918-31919984)
chr1 (280-345)||(35838714-35838780)
chr1 (280-345)||(39151720-39151786)
chr1 (287-398)||(42468858-42468969)
chr1 (280-345)||(47011322-47011388)
chr1 (276-345)||(48605148-48605218)
chr1 (280-345)||(49363462-49363528)
chr1 (280-344)||(6169806-6169871)
chr1 (286-327)||(6792373-6792414)
chr1 (351-403)||(12062203-12062256)
chr1 (351-403)||(21852446-21852499)
chr1 (281-345)||(24478743-24478808)
chr1 (289-345)||(31909754-31909811)
chr1 (280-344)||(40341726-40341791)
chr1 (276-321)||(49980609-49980654)
chr1 (290-345)||(1252137-1252193)
chr1 (290-345)||(2091824-2091880)
chr1 (287-327)||(7151636-7151676)
chr1 (279-327)||(7213860-7213908)
chr1 (279-327)||(15998308-15998356)
chr1 (279-327)||(16427005-16427053)
chr1 (279-327)||(24023462-24023510)
chr1 (275-327)||(24286756-24286808)
chr1 (278-345)||(27549123-27549191)
chr1 (286-345)||(31481943-31482003)
chr1 (351-398)||(34037998-34038046)
chr1 (287-327)||(41621293-41621333)
chr1 (279-327)||(48376902-48376949)
[»] scaffold0047 (1 HSPs)
scaffold0047 (279-345)||(65915-65982)
[»] scaffold0321 (2 HSPs)
scaffold0321 (280-345)||(1711-1777)
scaffold0321 (279-345)||(1628-1695)
[»] scaffold0121 (1 HSPs)
scaffold0121 (280-345)||(17512-17578)
[»] scaffold0011 (1 HSPs)
scaffold0011 (280-345)||(257-323)
[»] scaffold0111 (1 HSPs)
scaffold0111 (286-345)||(38085-38145)
[»] scaffold0009 (2 HSPs)
scaffold0009 (279-327)||(49658-49706)
scaffold0009 (287-327)||(8282-8322)
[»] scaffold0635 (1 HSPs)
scaffold0635 (280-345)||(5466-5532)
[»] scaffold0280 (1 HSPs)
scaffold0280 (277-319)||(13530-13572)
[»] scaffold0019 (1 HSPs)
scaffold0019 (280-320)||(45517-45557)


Alignment Details
Target: chr4 (Bit Score: 80; Significance: 2e-37; HSPs: 81)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 254 - 457
Target Start/End: Complemental strand, 27080212 - 27079999
Alignment:
Q  254 ccaaatatttctatttcctttatacatactctctccgtttctaaatataagcaaaacttactttttagattcat-caattcatgatgtatgtg-tttat- 350  Q
    |||||||||||||||||||||||||||||||  || |||| ||||||||||||||| ||||||||||| ||||| ||||| || ||||||||| |||||     
T  27080212 ccaaatatttctatttcctttatacatactccatctgtttttaaatataagcaaaatttactttttaggttcattcaattaat-atgtatgtggtttata 27080114  T
Q  351 --------cacatatatcattaattga-tgaacctacaaagtaaattttacttatatctaaagttggtgttaaaataaacttgcccaaagtatccatcat 441  Q
            |||||| | |||||||||| |||| ||| ||| |||| ||| ||||||| || ||| |||||||||||||||||||||||||||||||||||    
T  27080113 atatagaccacatacaacattaattgaatgaatctaaaaa-taaaatttgcttatatttagagtaggtgttaaaataaacttgcccaaagtatccatcat 27080015  T
Q  442 taacagttgtgatttg 457  Q
    ||||||||||||||||    
T  27080014 taacagttgtgatttg 27079999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 27080452 - 27080401
Alignment:
Q  13 aatattacctgattatgttaaaaattaagttatttgatttgtatggaagtat 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27080452 aatattacctgattatgttaaaaattaagttatttgatttgtatggaagtat 27080401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 403
Target Start/End: Original strand, 50038446 - 50038581
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtgttt----------atcacatatatcattaattg 368  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||| |||||| |||||||||||| ||          || ||||| |||||||||||    
T  50038446 tactccctccgtttctaaatataagcaaattttactttttagattcattcaattaatgatgtatgtggttcataatatggattacatacatcattaattg 50038545  T
Q  369 -atgaacctacaaagtaaattttacttatatctaaa 403  Q
     ||||||||| |||||||| ||||||||||| ||||    
T  50038546 aatgaacctaaaaagtaaaatttacttatatttaaa 50038581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 403
Target Start/End: Original strand, 50045668 - 50045803
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtgttt----------atcacatatatcattaattg 368  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||| |||||| |||||||||||| ||          || ||||| |||||||||||    
T  50045668 tactccctccgtttctaaatataagcaaattttactttttagattcattcaattaatgatgtatgtggttcataatatggattacatacatcattaattg 50045767  T
Q  369 -atgaacctacaaagtaaattttacttatatctaaa 403  Q
     ||||||||| |||||||| ||||||||||| ||||    
T  50045768 aatgaacctaaaaagtaaaatttacttatatttaaa 50045803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 398
Target Start/End: Complemental strand, 34595827 - 34595704
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattcat-caattcatgatgtatgtgttt-atc-acatatatcattaattga-tgaac 374  Q
    |||||| |||||||| ||||||||| ||||| | ||||||||| ||||| ||||| ||||||||| || || ||| | ||| |||||||||||| |||||    
T  34595827 atactccctccgtttttaaatataaacaaaattgactttttaggttcattcaattaatgatgtatatggttcatccatatacatcattaattgaatgaac 34595728  T
Q  375 ctacaaagtaaattttacttatat 398  Q
    ||| ||||| ||||||||||||||    
T  34595727 ctaaaaagtcaattttacttatat 34595704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 271 - 340
Target Start/End: Original strand, 23511849 - 23511919
Alignment:
Q  271 ctttatacatactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgt 340  Q
    ||||| |||||||||||||||||||| |||||||||||| | ||||||||| |||| |||||| |||||||    
T  23511849 ctttaaacatactctctccgtttctatatataagcaaaattgactttttaggttcattcaattaatgatgt 23511919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 34166108 - 34166174
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||||||||||||||||||||| | ||||||||| |||| |||||| ||||||||||||    
T  34166108 tactccctccgtttctaaatataagcaaaattgactttttaggttcattcaattaatgatgtatgtg 34166174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 39754094 - 39754160
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt 344  Q
    ||||||||||||||||||||||||||||||  ||||||||||| || | |||||| |||||||||||    
T  39754094 atactctctccgtttctaaatataagcaaattttactttttaggtttattcaattaatgatgtatgt 39754160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 53508493 - 53508562
Alignment:
Q  277 acatactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||| |||||||||||||||||||||||  |||||||||||  ||| |||||| ||||||||||||    
T  53508493 acatactccctccgtttctaaatataagcaaattttactttttaggctcattcaattaatgatgtatgtg 53508562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 56420575 - 56420510
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt 344  Q
    ||||| |||||||||||||||||||||||  ||||||||||| |||| |||||| |||||||||||    
T  56420575 tactccctccgtttctaaatataagcaaattttactttttaggttcattcaattaatgatgtatgt 56420510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 345
Target Start/End: Original strand, 15133829 - 15133889
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||| |||||||||||||| ||||||||||| |||| |||||| ||||||||||||    
T  15133829 ctccgtttcaaaatataagcaaaatttactttttaggttcattcaattaatgatgtatgtg 15133889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 38224082 - 38224034
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    ||||||||||||||| ||||||||||||||| | |||||||||||||||    
T  38224082 atactctctccgtttttaaatataagcaaaattgactttttagattcat 38224034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 345
Target Start/End: Original strand, 55229542 - 55229610
Alignment:
Q  278 catactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||||||||||| ||||||||||||||| | |||||| ||||||| ||| || ||||||||||||    
T  55229542 catactctctccgtttttaaatataagcaaaattcacttttcagattcattcatttaatgatgtatgtg 55229610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 1945508 - 1945441
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||||||||||||| |||||| ||||| | ||||||||| |||| |||||| ||||||||||||    
T  1945508 atactctctccgtttctatatataaccaaaattgactttttaggttcattcaattaatgatgtatgtg 1945441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 7695274 - 7695207
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| ||||||||| |||||||||||||| ||||||||||| |||| ||| || ||||||||||||    
T  7695274 atactccctccgtttcaaaatataagcaaaatttactttttaggttcattcatttaatgatgtatgtg 7695207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 25856155 - 25856088
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| ||||||||| |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  25856155 atactccctccgtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 25856088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 35207434 - 35207501
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| ||||||||| |||||||||||||| ||||||||||| |||| ||| || ||||||||||||    
T  35207434 atactccctccgtttcaaaatataagcaaaatttactttttaggttcattcatttaatgatgtatgtg 35207501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 51394243 - 51394176
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||| |||||||||||||||||| |||| | |||||||||||||| ||| || ||||||||||||    
T  51394243 atactctatccgtttctaaatataagtaaaattgactttttagattcattcatttaatgatgtatgtg 51394176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 34709571 - 34709637
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||| | ||||||||||||||| |||||||||||||||| ||| || ||||||||||||    
T  34709571 tactccctccgtatttaaatataagcaaaatttactttttagattcattcatttaatgatgtatgtg 34709637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 43635832 - 43635898
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| ||||||||| |||  |||||||||||||||| |||||| ||||||||||||    
T  43635832 tactccctccgtttcaaaatataagaaaattttactttttagattcattcaattaatgatgtatgtg 43635898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 45861149 - 45861083
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| |||||||||||||| | |||||||||||||| ||| || ||||||||||||    
T  45861149 tactccctccgtttcaaaatataagcaaaattcactttttagattcattcatttaatgatgtatgtg 45861083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 44639893 - 44639824
Alignment:
Q  277 acatactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||| |||||||  ||||||||||||||  | |||||||||||||| |||||| ||||||||||||    
T  44639893 acatactccctccgttcttaaatataagcaaatttcactttttagattcattcaattaatgatgtatgtg 44639824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 2994714 - 2994782
Alignment:
Q  277 acatactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt 344  Q
    |||||||| ||||||||| |||||||||||||| | ||||||||| |||| ||| || |||||||||||    
T  2994714 acatactccctccgtttcaaaatataagcaaaattcactttttaggttcattcatttaatgatgtatgt 2994782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 345
Target Start/End: Original strand, 12721639 - 12721707
Alignment:
Q  278 catactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||| ||| ||||| |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  12721639 catactccctctgtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 12721707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 345
Target Start/End: Complemental strand, 36235816 - 36235756
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||| |||||||||||||| ||||||||||| |||| ||| || ||||||||||||    
T  36235816 ctccgtttcaaaatataagcaaaatttactttttaggttcattcatttaatgatgtatgtg 36235756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 290 - 345
Target Start/End: Original strand, 49573885 - 49573941
Alignment:
Q  290 gtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||||||||||||||  ||||||| |||||||| |||||| ||||||||||||    
T  49573885 gtttctaaatataagcaaattttactttatagattcattcaattaatgatgtatgtg 49573941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 345
Target Start/End: Complemental strand, 54569494 - 54569434
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||||||||||||||||||| | | ||||||| |||| |||||| ||||||||||||    
T  54569494 ctccgtttctaaatataagcaaaattaattttttaggttcattcaattaatgatgtatgtg 54569434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 12721783 - 12721724
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||| |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  12721783 tccgtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 12721724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 13744003 - 13743936
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||| || |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  13744003 atactccctccgtctcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 13743936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 17659610 - 17659543
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||| || |||||||||||||  |||||||||||||||| |||||| ||||| ||||||    
T  17659610 atactccctccgtctcaaaatataagcaaattttactttttagattcattcaattaatgatatatgtg 17659543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 30051488 - 30051421
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattc-atcaattcatgatgtatgtg 345  Q
    |||||| |||||| || |||||||||||||  |||||||||||||||  |||||| ||||||||||||    
T  30051488 atactccctccgtctcaaaatataagcaaattttactttttagattcgttcaattaatgatgtatgtg 30051421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 31860654 - 31860713
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||| |||||||||||||| | |||||||||||||| ||| || ||||||||||||    
T  31860654 tccgtttcaaaatataagcaaaattcactttttagattcattcatttaatgatgtatgtg 31860713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 31914472 - 31914425
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    ||||| ||||||||||||||||||| |||| | |||||||||||||||    
T  31914472 tactccctccgtttctaaatataagtaaaattgactttttagattcat 31914425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 35207583 - 35207536
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    ||||| ||||||||| |||||||||||||| ||||||||||| |||||    
T  35207583 tactccctccgtttcaaaatataagcaaaatttactttttaggttcat 35207536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 320
Target Start/End: Complemental strand, 35967528 - 35967485
Alignment:
Q  277 acatactctctccgtttctaaatataagcaaaacttacttttta 320  Q
    |||||||| |||||||||||||||||||||||| | ||||||||    
T  35967528 acatactccctccgtttctaaatataagcaaaattgacttttta 35967485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 41788924 - 41788983
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||||||||||||||||  ||| ||||||| |||| |||||| ||||||||||||    
T  41788924 tccgtttctaaatataagcaaattttattttttaggttcattcaattaatgatgtatgtg 41788983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 46779439 - 46779372
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||||| ||||||||||||||  ||| |||||||||||| | |||| ||||||||||||    
T  46779439 atactccctccgtttttaaatataagcaaattttattttttagattcatttaattaatgatgtatgtg 46779372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 48079519 - 48079578
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||| |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  48079519 tccgtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 48079578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 51126100 - 51126167
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| ||||||||  |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  51126100 atactccctccgttttaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 51126167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 51126250 - 51126183
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||| || |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  51126250 atactccctccgtctcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 51126183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 53551740 - 53551673
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||||||||||||||||||||  ||||||||||   ||| |||||| ||||||||||||    
T  53551740 atactccctccgtttctaaatataagcaaattttactttttaagctcattcaattaatgatgtatgtg 53551673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 56420426 - 56420493
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||||| ||||||||| ||||  ||||||||||| |||| |||||| ||||||||||||    
T  56420426 atactccctccgtttttaaatataaacaaattttactttttaggttcactcaattaatgatgtatgtg 56420493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 9011889 - 9011823
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||  |||||||||||||| | |||||||||||||| ||| || ||||||||||||    
T  9011889 tactccctccgttttaaaatataagcaaaattcactttttagattcattcatttaatgatgtatgtg 9011823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 9968297 - 9968363
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||||| |||||||||| |||  ||||||||||| |||| |||||| ||||||||||||    
T  9968297 tactccctccgtttttaaatataagtaaattttactttttaggttcattcaattaatgatgtatgtg 9968363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 18592341 - 18592407
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||||| ||||||||||||||| | ||||||||| |||| ||| || ||||||||||||    
T  18592341 tactccctccgtttttaaatataagcaaaattgactttttaggttcattcatttaatgatgtatgtg 18592407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 18592489 - 18592423
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||||||||||| ||||||||| | ||||||||| |||| ||| || ||||||||||||    
T  18592489 tactccctccgtttctaaatctaagcaaaattcactttttaggttcattcatttaatgatgtatgtg 18592423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 24156135 - 24156201
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||||| ||||||||||||||| | ||||||||| |||| ||| || ||||||||||||    
T  24156135 tactccctccgtttttaaatataagcaaaattgactttttaggttcattcatttaatgatgtatgtg 24156201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 344
Target Start/End: Original strand, 24331428 - 24331486
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt 344  Q
    ||||||||||||||||||||||  ||| |||||||||||| |||||| || ||||||||    
T  24331428 tccgtttctaaatataagcaaattttattttttagattcattcaattaataatgtatgt 24331486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 34827620 - 34827550
Alignment:
Q  276 tacatactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||||  ||||||| |||||||||||||   ||| |||||||||||| |||||| ||||||||||||    
T  34827620 tacatactccatccgtttttaaatataagcaagttttattttttagattcattcaattaatgatgtatgtg 34827550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 45861001 - 45861067
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| |||||||||||||| | ||||||||| |||| ||| || ||||||||||||    
T  45861001 tactccctccgtttcaaaatataagcaaaattcactttttaggttcattcatttaatgatgtatgtg 45861067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 47628274 - 47628324
Alignment:
Q  277 acatactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    ||||| || ||||||||| |||||||||||||| ||||||||||| |||||    
T  47628274 acatattccctccgtttcaaaatataagcaaaatttactttttaggttcat 47628324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 54677346 - 54677412
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| |||||||||||||| | ||||||||| |||| ||| || ||||||||||||    
T  54677346 tactccctccgtttcaaaatataagcaaaattcactttttaggttcattcatttaatgatgtatgtg 54677412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 5289707 - 5289764
Alignment:
Q  289 cgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||||||||||  |||  |||||||||||||||| |||||| ||||||||||||    
T  5289707 cgtttctaaatataaataaattttactttttagattcattcaattaatgatgtatgtg 5289764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 403
Target Start/End: Complemental strand, 9968363 - 9968310
Alignment:
Q  351 cacatatatcattaattga-tgaacctacaaagtaaattttacttatatctaaa 403  Q
    |||||| |||||||||||| |||||||| |||||||| ||||||||||| ||||    
T  9968363 cacatacatcattaattgaatgaacctaaaaagtaaaatttacttatatttaaa 9968310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 11583712 - 11583769
Alignment:
Q  289 cgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||||||||||| |||  ||||||||||| |||| |||||| ||||||||||||    
T  11583712 cgtttctaaatataagtaaatattactttttagcttcattcaattaatgatgtatgtg 11583769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 398
Target Start/End: Complemental strand, 15133890 - 15133841
Alignment:
Q  350 tcacatatatcattaattga-tgaacctacaaagtaaattttacttatat 398  Q
    ||||||| |||||||||||| |||||||| |||||||||||| |||||||    
T  15133890 tcacatacatcattaattgaatgaacctaaaaagtaaattttgcttatat 15133841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 31808469 - 31808400
Alignment:
Q  277 acatactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||  |||||||  |||||||||||||| ||| |||||||||||| ||| || ||||||||||||    
T  31808469 acatactccatccgttttaaaatataagcaaaatttattttttagattcattcatttaatgatgtatgtg 31808400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 327
Target Start/End: Original strand, 31914142 - 31914179
Alignment:
Q  290 gtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||||||||||||||||| | |||||||||||||||    
T  31914142 gtttctaaatataagcaaaattaactttttagattcat 31914179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 34321387 - 34321444
Alignment:
Q  289 cgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||||||||| ||||||||||| |||| ||| || ||||||||||||    
T  34321387 cgtttttaaatataagcaaaatttactttttaggttcattcatttaatgatgtatgtg 34321444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 34709722 - 34709653
Alignment:
Q  277 acatactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||| |||||||| | ||||||||||||| | ||||||||| |||| ||| || ||||||||||||    
T  34709722 acatactccctccgttttttaatataagcaaaattgactttttaggttcattcatttaatgatgtatgtg 34709653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 39466697 - 39466766
Alignment:
Q  277 acatactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||| |||||| || |||||||||||||| | ||||||||| |||| ||| || ||||||||||||    
T  39466697 acatactccctccgtatcaaaatataagcaaaattcactttttaggttcattcatttaatgatgtatgtg 39466766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 345
Target Start/End: Complemental strand, 53176746 - 53176689
Alignment:
Q  289 cgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||||||||||  |||||||||| ||||| |||||| ||||||||||||    
T  53176746 cgtttcaaaatataagcaaattttactttttaaattcattcaattaatgatgtatgtg 53176689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 345
Target Start/End: Complemental strand, 17028371 - 17028311
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||| |||||||| ||||  ||||||||||| |||| |||||| ||||||||||||    
T  17028371 ctccgtttcaaaatataaacaaattttactttttaggttcattcaattaatgatgtatgtg 17028311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 290 - 345
Target Start/End: Original strand, 17659471 - 17659527
Alignment:
Q  290 gtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  17659471 gtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 17659527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 398
Target Start/End: Complemental strand, 19754277 - 19754229
Alignment:
Q  351 cacatatatcattaattg-atgaacctacaaagtaaattttacttatat 398  Q
    |||||||||||||||||| ||||| ||| |||||||| |||||||||||    
T  19754277 cacatatatcattaattgaatgaatctaaaaagtaaaatttacttatat 19754229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 398
Target Start/End: Original strand, 19785529 - 19785577
Alignment:
Q  351 cacatatatcattaattg-atgaacctacaaagtaaattttacttatat 398  Q
    |||||||||||||||||| ||||| ||| |||||||| |||||||||||    
T  19785529 cacatatatcattaattgaatgaatctaaaaagtaaaatttacttatat 19785577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 398
Target Start/End: Complemental strand, 23329432 - 23329384
Alignment:
Q  351 cacatatatcattaattga-tgaacctacaaagtaaattttacttatat 398  Q
    |||||| |||||||||||| |||||||| |||||||| |||||||||||    
T  23329432 cacatacatcattaattgaatgaacctaaaaagtaaaatttacttatat 23329384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 341
Target Start/End: Complemental strand, 23512014 - 23511958
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgta 341  Q
    ||||||||||| |||||||||||| | ||||||||| |||| |||||| ||||||||    
T  23512014 ctccgtttctatatataagcaaaattgactttttaggttcattcaattaatgatgta 23511958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 398
Target Start/End: Original strand, 23754270 - 23754318
Alignment:
Q  351 cacatatatcattaattg-atgaacctacaaagtaaattttacttatat 398  Q
    |||||||||||||||||| ||||||||| |||||||| ||| |||||||    
T  23754270 cacatatatcattaattgaatgaacctaaaaagtaaaatttgcttatat 23754318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 398
Target Start/End: Complemental strand, 24529635 - 24529587
Alignment:
Q  351 cacatatatcattaattga-tgaacctacaaagtaaattttacttatat 398  Q
    |||||| |||||||||||| |||||||| ||||| ||||||||||||||    
T  24529635 cacatacatcattaattgaatgaacctaaaaagtcaattttacttatat 24529587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 342
Target Start/End: Complemental strand, 30017010 - 30016954
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtat 342  Q
    |||||||||||||||||||||   ||| |||||||||||| |||||| |||||||||    
T  30017010 tccgtttctaaatataagcaatttttagtttttagattcattcaattaatgatgtat 30016954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 345
Target Start/End: Complemental strand, 30279278 - 30279218
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| || |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  30279278 ctccgtctcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 30279218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 33811288 - 33811248
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttacttttt 319  Q
    |||||| |||||||||||||||||||||||  |||||||||    
T  33811288 atactccctccgtttctaaatataagcaaattttacttttt 33811248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 344
Target Start/End: Complemental strand, 34321529 - 34321461
Alignment:
Q  277 acatactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt 344  Q
    ||||||||  ||||||||||||||||| ||||| | ||||||||| |||| ||| || |||||||||||    
T  34321529 acatactccttccgtttctaaatataaacaaaattgactttttaggttcattcatttaatgatgtatgt 34321461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 37306834 - 37306874
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    ||||||||||||||||||||||  ||||||||||| |||||    
T  37306834 tccgtttctaaatataagcaaattttactttttaggttcat 37306874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 37381079 - 37381119
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    ||||||||||| ||||||||||  |||||||||||||||||    
T  37381079 tccgtttctaattataagcaaattttactttttagattcat 37381119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 290 - 345
Target Start/End: Original strand, 44639752 - 44639808
Alignment:
Q  290 gtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||| ||||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  44639752 gtttttaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 44639808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 345
Target Start/End: Original strand, 48088012 - 48088072
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||| ||||||||||||||| | ||||||||  |||| |||||| ||||||||||||    
T  48088012 ctccgtttttaaatataagcaaaattgactttttatgttcattcaattaatgatgtatgtg 48088072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 48950623 - 48950583
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttacttttt 319  Q
    |||||| |||||||||||||||||| ||||| |||||||||    
T  48950623 atactccctccgtttctaaatataaacaaaatttacttttt 48950583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 345
Target Start/End: Complemental strand, 54927251 - 54927183
Alignment:
Q  278 catactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||| ||||||||| |||||||||||||| | |||||||||  ||| ||| || ||||||||||||    
T  54927251 catactccctccgtttcaaaatataagcaaaattcactttttaggatcattcatttaatgatgtatgtg 54927183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 345
Target Start/End: Complemental strand, 55501340 - 55501280
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||| ||||||||||||||  ||||||||||| |||| |||||| ||| ||||||||    
T  55501340 ctccgtttttaaatataagcaaattttactttttaggttcattcaattaatggtgtatgtg 55501280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 398
Target Start/End: Complemental strand, 19784670 - 19784548
Alignment:
Q  277 acatactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtgtttatcacatatatcattaattg-atgaac 374  Q
    |||||||| ||||||||| |||||||||||||  ||||||||||| |||| |||||| ||||||||||||  || |||||| ||||||||||| ||||||    
T  19784670 acatactccctccgtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg-gtaccacatacatcattaattgaatgaac 19784572  T
Q  375 ctacaaagtaaattttacttatat 398  Q
    ||| |||||||| ||| |||||||    
T  19784571 ctaaaaagtaaaatttgcttatat 19784548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 280 - 398
Target Start/End: Original strand, 19784530 - 19784649
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtgtttatcacatatatcattaattg-atgaaccta 377  Q
    ||||| ||||||||| |||||||||||||  ||||||||||| |||| |||||| ||||||||||||  || |||||| ||||||||||| |||||||||    
T  19784530 tactccctccgtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg-gtaccacatacatcattaattgaatgaaccta 19784628  T
Q  378 caaagtaaattttacttatat 398  Q
     |||||||| ||| |||||||    
T  19784629 aaaagtaaaatttgcttatat 19784649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 403
Target Start/End: Complemental strand, 14064948 - 14064819
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtgttt----------atcacatatatcattaattg-atgaa 373  Q
    |||||||| ||||||||||||||| |||||||||||||||| |||||| |||||||||||| ||          | |||||| ||||||||||| |||||    
T  14064948 ctccgtttttaaatataagcaaaaattactttttagattcattcaattaatgatgtatgtgattcataatatggaccacatacatcattaattgaatgaa 14064849  T
Q  374 cctacaaagtaaattttacttatatctaaa 403  Q
    |||| |||||||| ||||||||||| ||||    
T  14064848 cctaaaaagtaaaatttacttatatttaaa 14064819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 14571003 - 14571070
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||||||||||||||||||||  ||| |||||||||||| |||||| ||||||||||||    
T  14571003 atactccctccgtttctaaatataagcaaattttattttttagattcattcaattaatgatgtatgtg 14571070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 23042107 - 23042040
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||||||||| ||||||||||||||| ||||||||||| |||| | |||| ||||||||||||    
T  23042107 atactctctccgtttttaaatataagcaaaatttactttttaggttcattgaattaatgatgtatgtg 23042040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 34102220 - 34102153
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||||||||||||||| ||||| |||| ||||||||||| |||||| ||||||||||||    
T  34102220 atactccctccgtttctaaatataaacaaaatttaccttttagattcattcaattaatgatgtatgtg 34102153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 29807224 - 29807154
Alignment:
Q  276 tacatactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||| |||||||||| ||||||||||||  |||||||||||||||| |||||| || |||||||||    
T  29807224 tacatactccctccgtttcttaatataagcaaattttactttttagattcattcaattaattatgtatgtg 29807154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 398
Target Start/End: Original strand, 34399567 - 34399681
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattcat-caattcatgatgtatgtgtttatcacatatatcattaattga-tgaacctacaaagt 383  Q
    ||||||||  |||||||||||||| | | ||||||| ||||| || || |||||||||||| ||   |||||||| ||||| ||| |||||||| |||||    
T  34399567 ctccgttttaaaatataagcaaaattcattttttaggttcattcatttaatgatgtatgtgattcatacatatattattaaatgaatgaacctaaaaagt 34399666  T
Q  384 aaattttacttatat 398  Q
    |||||||||||||||    
T  34399667 aaattttacttatat 34399681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 280 - 403
Target Start/End: Original strand, 20207157 - 20207282
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtgtttatcacatatatcattaattg-atgaaccta 377  Q
    ||||| ||| |||||||||||||||||||| | |  |||||| |||| |||||| |||||||||||| |   |||||  ||||||||||| ||||| |||    
T  20207157 tactccctcagtttctaaatataagcaaaattgaacttttaggttcattcaattaatgatgtatgtggtccacacatgcatcattaattgaatgaatcta 20207256  T
Q  378 caaagtaaattttacttatatctaaa 403  Q
     ||| |||||||||||||||| ||||    
T  20207257 aaaaataaattttacttatatttaaa 20207282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 20361973 - 20362038
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt 344  Q
    ||||| |||||||| ||||||||||||||  |||||||||||||||| |||||| |||||||||||    
T  20361973 tactccctccgtttttaaatataagcaaattttactttttagattcattcaattaatgatgtatgt 20362038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 278 - 327
Target Start/End: Original strand, 32146821 - 32146870
Alignment:
Q  278 catactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||||||||||||| ||||||||||||||| ||||||||||| |||||    
T  32146821 catactctctccgtttttaaatataagcaaaatttactttttaggttcat 32146870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 273 - 345
Target Start/End: Complemental strand, 43585646 - 43585573
Alignment:
Q  273 ttatacatactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||  ||||||| ||||||||||||||| ||||||||||| |||| |||||| ||||||||||||    
T  43585646 ttataaatactccatccgtttttaaatataagcaaaatttactttttaggttcattcaattaatgatgtatgtg 43585573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 398
Target Start/End: Complemental strand, 15966094 - 15965970
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt-gtttat---------cacatatatcattaattg-atgaa 373  Q
    ||||||||| |||||||||||||  ||||||||||| |||| |||||| ||||||||||| ||||||         |||||| ||||||||||| |||||    
T  15966094 ctccgtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtggtttataatatagaccacatacatcattaattgaatgaa 15965995  T
Q  374 cctacaaagtaaattttacttatat 398  Q
    |||| |||||||| |||||||||||    
T  15965994 cctaaaaagtaaaatttacttatat 15965970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 5226014 - 5226081
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| ||||||||| |||||||||||||| | |||||||||||||| ||| || ||||||||||||    
T  5226014 atactccctccgtttcaaaatataagcaaaattcactttttagattcattcatttaatgatgtatgtg 5226081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 7336992 - 7336933
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||||||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  7336992 tccgtttctaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 7336933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 33696800 - 33696733
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| ||||||||| |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  33696800 atactccctccgtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 33696733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 35969036 - 35969103
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||| ||||||||||||||||| ||||  |||||||||||||||| | |||| ||||||||||||    
T  35969036 atactctatccgtttctaaatataaacaaattttactttttagattcatttaattaatgatgtatgtg 35969103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 39126159 - 39126092
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| ||||||| | |||||||||||||  |||||||||||||||| |||||| ||||||||||||    
T  39126159 atactccctccgttccaaaatataagcaaattttactttttagattcattcaattaatgatgtatgtg 39126092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 8694476 - 8694526
Alignment:
Q  277 acatactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    ||||||||  ||||||||||||||||||||||| | |||||||||||||||    
T  8694476 acatactccatccgtttctaaatataagcaaaattgactttttagattcat 8694526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 398
Target Start/End: Complemental strand, 20207285 - 20207175
Alignment:
Q  290 gtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtgtttatcacatatatcattaattg-atgaacctacaaagtaaat 387  Q
    |||| |||||||||| |||| ||| |||||||||||| |||||| |||||| ||||||  | |||||| ||||||||||| ||||||||| ||  | |||    
T  20207285 gtttttaaatataagtaaaatttattttttagattcattcaattaatgatgcatgtgtggaccacatacatcattaattgaatgaacctaaaagttcaat 20207186  T
Q  388 tttacttatat 398  Q
    ||| |||||||    
T  20207185 tttgcttatat 20207175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 26168332 - 26168266
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  26168332 tactccctccgtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 26168266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 34186351 - 34186417
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| |||||||||||||| | ||||||||| |||| |||||| ||||||||||||    
T  34186351 tactccctccgtttcaaaatataagcaaaaatgactttttaggttcattcaattaatgatgtatgtg 34186417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 342
Target Start/End: Complemental strand, 3161368 - 3161307
Alignment:
Q  282 ctctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtat 342  Q
    |||||||||||| ||||||||||||||  ||||||||||| |||| |||||| |||||||||    
T  3161368 ctctctccgtttttaaatataagcaaattttactttttaggttcattcaattaatgatgtat 3161307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 286 - 398
Target Start/End: Complemental strand, 15385948 - 15385832
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg--tttatcacatatatcattaattg-atgaacctacaaa 381  Q
    ||||||||  |||||||||||||  ||||||||||  |||| |||||| ||||||||||||  || | |||||| ||||||||||| |||||| || |||    
T  15385948 ctccgttttaaaatataagcaaattttactttttaagttcattcaattaatgatgtatgtggtttaaccacatacatcattaattgaatgaacttaaaaa 15385849  T
Q  382 gtaaattttacttatat 398  Q
    ||||| ||| |||||||    
T  15385848 gtaaaatttgcttatat 15385832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 20367313 - 20367370
Alignment:
Q  289 cgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||||||||| ||||  |||||||||||||||| |||||| ||||||||||||    
T  20367313 cgtttctaaatataaacaaattttactttttagattcattcaattaatgatgtatgtg 20367370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 22474082 - 22474017
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt 344  Q
    ||||| |||||||||||||||||||||||| | | |||||||||||| ||| || |||||||||||    
T  22474082 tactccctccgtttctaaatataagcaaaattcattttttagattcattcatttaatgatgtatgt 22474017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 279 - 403
Target Start/End: Original strand, 43585490 - 43585626
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtgttt----------atcacatatatcattaatt 367  Q
    |||||| |||||||| ||||||||| ||||  ||||||||||| |||| |||||| |||||||||||| ||          | |||||| ||||||||||    
T  43585490 atactccctccgtttttaaatataaacaaattttactttttaggttcattcaattaatgatgtatgtggttcatattatgaaccacatacatcattaatt 43585589  T
Q  368 g-atgaacctacaaagtaaattttacttatatctaaa 403  Q
    | ||||||||| |||||||||||| ||||||| ||||    
T  43585590 gaatgaacctaaaaagtaaattttgcttatatttaaa 43585626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 7581388 - 7581428
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  7581388 tccgtttctaaatataagcaaattttactttttagattcat 7581428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 15385821 - 15385936
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtgttt--atcacatatatcattaattg-atgaacctacaaag 382  Q
    |||||||  |||||||||||||  ||||||||||  |||| |||||| |||||||||||| ||  | |||||| ||||||||||| |||||| || ||||    
T  15385821 tccgttttaaaatataagcaaattttactttttaagttcattcaattaatgatgtatgtggttaaaccacatacatcattaattgaatgaacttaaaaag 15385920  T
Q  383 taaattttacttatat 398  Q
    |||| ||| |||||||    
T  15385921 taaaatttgcttatat 15385936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 369
Target Start/End: Original strand, 35245587 - 35245681
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt-gtttat---cacatatatcattaattga 369  Q
    ||||| ||| ||||| |||||||||||||  ||||||||||| |||| |||||| ||||||||||| ||||||   |||||| ||||||||||||    
T  35245587 tactccctcagtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtggtttataaccacatacatcattaattga 35245681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 6168674 - 6168741
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| ||||||||| |||||||||||||| | ||||||||| |||| ||| || ||||||||||||    
T  6168674 atactccctccgtttcaaaatataagcaaaattcactttttaggttcattcatttaatgatgtatgtg 6168741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 14064805 - 14064872
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||||| |||||||||| |||  ||||||||||| |||| |||||| ||||||||||||    
T  14064805 atactccctccgtttttaaatataagtaaattttactttttaggttcattcaattaatgatgtatgtg 14064872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 15965951 - 15966018
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| ||||||||| ||||||||| |||  ||||||||||| |||| |||||| ||||||||||||    
T  15965951 atactcactccgtttcaaaatataagtaaattttactttttaggttcattcaattaatgatgtatgtg 15966018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 18942131 - 18942064
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||| ||||||||||||||||  ||| ||||||| |||| |||||| ||||||||||||    
T  18942131 atactccctccgtatctaaatataagcaaattttattttttaggttcattcaattaatgatgtatgtg 18942064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 21369417 - 21369370
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    ||||| ||||||||  |||||||||||||| |||||||||||||||||    
T  21369417 tactccctccgttttaaaatataagcaaaatttactttttagattcat 21369370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 29255795 - 29255748
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    ||||| |||||||||||||||||||||||  ||||||||||| |||||    
T  29255795 tactccctccgtttctaaatataagcaaattttactttttaggttcat 29255748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 342
Target Start/End: Complemental strand, 31947594 - 31947531
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattc-atcaattcatgatgtat 342  Q
    ||||| ||||||| |||||||||||||||  ||||||||||| ||| ||||||| |||||||||    
T  31947594 tactccctccgttcctaaatataagcaaattttactttttaggttcaatcaattaatgatgtat 31947531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 39916422 - 39916363
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||||||||||||||||  ||||||||||| |||| |||||| || |||||||||    
T  39916422 tccgtttctaaatataagcaaattttactttttaggttcattcaattaataatgtatgtg 39916363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 346
Target Start/End: Original strand, 3780973 - 3781043
Alignment:
Q  277 acatactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtgt 346  Q
    |||||||| |||||| | ||||||||||||||| | ||||||||| |||| ||| || |||||||||||||    
T  3780973 acatactccctccgtctttaaatataagcaaaattgactttttaggttcattcatttaatgatgtatgtgt 3781043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 8618393 - 8618459
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| |||||||||||||| | ||||||||| |||| ||| || ||||||||||||    
T  8618393 tactccctccgtttcaaaatataagcaaaattcactttttaggttcattcatttaatgatgtatgtg 8618459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 398
Target Start/End: Complemental strand, 21152652 - 21152602
Alignment:
Q  349 atcacatatatcattaattga-tgaacctacaaagtaaattttacttatat 398  Q
    |||||||| |||||||||||| |||||||| |||||||| |||||||||||    
T  21152652 atcacatacatcattaattgaatgaacctaaaaagtaaaatttacttatat 21152602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 398
Target Start/End: Complemental strand, 21159787 - 21159737
Alignment:
Q  349 atcacatatatcattaattga-tgaacctacaaagtaaattttacttatat 398  Q
    |||||||| |||||||||||| |||||||| |||||||| |||||||||||    
T  21159787 atcacatacatcattaattgaatgaacctaaaaagtaaaatttacttatat 21159737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 398
Target Start/End: Complemental strand, 21163594 - 21163544
Alignment:
Q  349 atcacatatatcattaattga-tgaacctacaaagtaaattttacttatat 398  Q
    |||||||| |||||||||||| |||||||| |||||||| |||||||||||    
T  21163594 atcacatacatcattaattgaatgaacctaaaaagtaaaatttacttatat 21163544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 21344593 - 21344527
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||| | ||||||||||||||| | |||||||||||||| ||| || ||||||||||||    
T  21344593 tactccctccgtctttaaatataagcaaaattgactttttagattcattcatttaatgatgtatgtg 21344527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 25596410 - 25596476
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattcatcaattcatgatgtatgtg 345  Q
    ||||||||| | || |||| ||||||||||  | ||||||||| |||||||||| ||||||||||||    
T  25596410 atactctcttctttcctaattataagcaaatttaactttttaggttcatcaattaatgatgtatgtg 25596476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 34186499 - 34186433
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||||| ||||||||||||||| | | ||||||| |||| |||||| ||||||||||||    
T  34186499 tactccctccgtttttaaatataagcaaaattgagtttttaggttcattcaattaatgatgtatgtg 34186433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 321
Target Start/End: Original strand, 34733369 - 34733403
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttag 321  Q
    ||||||||||||||||||||||| |||||||||||    
T  34733369 tccgtttctaaatataagcaaaatttactttttag 34733403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 35245752 - 35245686
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||  |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  35245752 tactccctccgttttaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 35245686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 38007828 - 38007770
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt 344  Q
    ||||||||||||||||||||||| ||| ||||||| |||| ||| || |||||||||||    
T  38007828 tccgtttctaaatataagcaaaatttaatttttaggttcattcatttaatgatgtatgt 38007770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 40428451 - 40428501
Alignment:
Q  277 acatactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    ||||||||  ||||||| ||||||||||||||| | |||||||||||||||    
T  40428451 acatactccttccgtttttaaatataagcaaaattgactttttagattcat 40428501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 43340411 - 43340477
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| || |||||| |||||||| ||||| ||||||||||| |||| |||||| ||||||||||||    
T  43340411 tactcccttcgtttcaaaatataaacaaaatttactttttaggttcattcaattaatgatgtatgtg 43340477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 14274278 - 14274213
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt 344  Q
    ||||||||||||||  |||||||||||||| | ||||||||| |||| ||| || |||||||||||    
T  14274278 tactctctccgttttaaaatataagcaaaattcactttttaggttcattcatttaatgatgtatgt 14274213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 403
Target Start/End: Complemental strand, 15966705 - 15966652
Alignment:
Q  351 cacatatatcattaattga-tgaacctacaaagtaaattttacttatatctaaa 403  Q
    |||||| |||||||||||| |||||||| ||||| |||||||||||||| ||||    
T  15966705 cacatacatcattaattgaatgaacctaaaaagttaattttacttatatttaaa 15966652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 398
Target Start/End: Complemental strand, 25714006 - 25713886
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtgtttatcacatatatcattaattg-atgaacct 376  Q
    |||||||||||||||| |||||||||||||| | | ||||||| |||| ||| || || ||||||||| ||   | |||||||||||| || ||||||||    
T  25714006 atactctctccgtttcaaaatataagcaaaattcaatttttaggttcattcatttaataatgtatgtggttcata-atatatcattaaatgaatgaacct 25713908  T
Q  377 acaaagtaaattttacttatat 398  Q
    | ||||| | |||| |||||||    
T  25713907 aaaaagtgatttttgcttatat 25713886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 29807091 - 29807140
Alignment:
Q  297 aatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||||||  |||||||||||||||| |||||| ||||||||||||    
T  29807091 aatataagcaaattttactttttagattcattcaattaatgatgtatgtg 29807140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 34102071 - 34102136
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt 344  Q
    ||||| |||||||| ||||||||||||||| ||| ||||||| |||| | |||| |||||||||||    
T  34102071 tactccctccgtttttaaatataagcaaaatttattttttaggttcattgaattaatgatgtatgt 34102136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 37684963 - 37685032
Alignment:
Q  277 acatactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||  ||||| ||||||||||||||||  ||||||||||  |||| |||||| ||||||||||||    
T  37684963 acatactccatccgtctctaaatataagcaaattttactttttaagttcattcaattaatgatgtatgtg 37685032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 327
Target Start/End: Original strand, 39916287 - 39916328
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    ||||||||||||||||||| |||  |||||||||||||||||    
T  39916287 ctccgtttctaaatataagtaaattttactttttagattcat 39916328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 6638225 - 6638273
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||| |||||||| ||||||||||||||  ||||||||||| |||||    
T  6638225 atactccctccgtttttaaatataagcaaattttactttttaggttcat 6638273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 398
Target Start/End: Original strand, 6638342 - 6638390
Alignment:
Q  351 cacatatatcattaattg-atgaacctacaaagtaaattttacttatat 398  Q
    |||||||||||||||||| |||||| || |||||||| |||||||||||    
T  6638342 cacatatatcattaattgaatgaacttaaaaagtaaaatttacttatat 6638390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 8694628 - 8694580
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||| |||||||||||||||||| ||||| | ||||||||| |||||    
T  8694628 atactccctccgtttctaaatataaacaaaattgactttttaggttcat 8694580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 345
Target Start/End: Complemental strand, 12891426 - 12891366
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||| |||||||||||||| | ||||||||| |||| ||| || ||||||||||||    
T  12891426 ctccgtttcaaaatataagcaaaattcactttttaggttcattcatttaatgatgtatgtg 12891366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 16067218 - 16067170
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||| ||||||||| |||||||||||||| | ||||||||| |||||    
T  16067218 atactccctccgtttcaaaatataagcaaaattcactttttaggttcat 16067170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 398
Target Start/End: Original strand, 21163608 - 21163656
Alignment:
Q  351 cacatatatcattaattga-tgaacctacaaagtaaattttacttatat 398  Q
    |||||| |||||||||||| |||||||| |||||||| |||||||||||    
T  21163608 cacatacatcattaattgaatgaacctaaaaagtaaaatttacttatat 21163656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 290 - 345
Target Start/End: Complemental strand, 22584366 - 22584310
Alignment:
Q  290 gtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||| ||||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  22584366 gtttttaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 22584310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 398
Target Start/End: Complemental strand, 36964292 - 36964244
Alignment:
Q  351 cacatatatcattaattga-tgaacctacaaagtaaattttacttatat 398  Q
    |||||| |||||||||||| |||||||| ||||| ||||||||||||||    
T  36964292 cacatacatcattaattgaatgaacctaaaaagtcaattttacttatat 36964244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 279 - 398
Target Start/End: Original strand, 17940183 - 17940305
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt-gtttatcacatatatcattaattg-atgaacc 375  Q
    |||||| |||||||| ||||||||||||||| ||||||||||| |||| ||| || ||||||||||| ||  | |||||| |||||||| || |||||||    
T  17940183 atactccctccgtttttaaatataagcaaaatttactttttaggttcattcatttaatgatgtatgtggtggaccacatacatcattaaatgaatgaacc 17940282  T
Q  376 tacaaagtaaattttacttatat 398  Q
    || |||||||||||| |||||||    
T  17940283 taaaaagtaaattttgcttatat 17940305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 403
Target Start/End: Complemental strand, 17940323 - 17940197
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt-gtttatcacatatatcattaattg-atgaacct 376  Q
    ||||| ||| |||||||||||||||||||| ||||||||||| |||| ||| || ||||||||||| ||  | |||||| |||||||| || ||||||||    
T  17940323 tactccctctgtttctaaatataagcaaaatttactttttaggttcattcatttaatgatgtatgtggtccaccacatacatcattaaatgaatgaacct 17940224  T
Q  377 acaaagtaaattttacttatatctaaa 403  Q
    | |||||||||||| ||||||| ||||    
T  17940223 aaaaagtaaattttgcttatatttaaa 17940197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 29076673 - 29076603
Alignment:
Q  276 tacatactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||| |||| ||||||||||||||||||| | |||||||||||||| |||||| ||||||||||||    
T  29076673 tacatactccctccatttctaaatataagcaaaattgactttttagattcattcaattaatgatgtatgtg 29076603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 34935533 - 34935600
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||||||||| ||||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  34935533 atactctctccgtttttaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 34935600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 19678957 - 19679024
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||||||||||||||||||||  |||| |||||| |||| |||||| ||||||||||||    
T  19678957 atactccctccgtttctaaatataagcaaattttaccttttaggttcattcaattaatgatgtatgtg 19679024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 20547903 - 20547836
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||||||||||| |||||||||||||| | ||||||||| |||| ||| || ||||||||||||    
T  20547903 atactctctccgtttcaaaatataagcaaaattcactttttaggttcattcatttaatgatgtatgtg 20547836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 26043387 - 26043328
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||||||||||||||||| ||||||||||  |||| |||||| ||||||||||||    
T  26043387 tccgtttctaaatataagcaaaatttactttttaagttcattcaattaatgatgtatgtg 26043328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 7933662 - 7933596
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||||||||| |||||||||||||  ||||||||||| |||| ||||||  |||||||||||    
T  7933662 tactctctccgtttcaaaatataagcaaattttactttttaggttcattcaattattgatgtatgtg 7933596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 19679107 - 19679041
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt 344  Q
    |||||| |||||||||||||||||||||||  ||||||||||  |||| |||||| |||||||||||    
T  19679107 atactccctccgtttctaaatataagcaaattttactttttaagttcattcaattaatgatgtatgt 19679041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 345
Target Start/End: Original strand, 32589315 - 32589377
Alignment:
Q  284 ctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||||| |||||||||||||  | |||||||||||||| |||||| ||||||||||||    
T  32589315 ctctccgtttcaaaatataagcaaatttgactttttagattcattcaattaatgatgtatgtg 32589377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 34413265 - 34413199
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| |||||||||||||| ||| |||||||||||| ||| || ||||||||||||    
T  34413265 tactccctccgtttcaaaatataagcaaaatttattttttagattcattcatttaatgatgtatgtg 34413199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 39333434 - 39333368
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| |||||||||||||| ||||||||||| |||| ||| || ||||||||||||    
T  39333434 tactccctccgtttcaaaatataagcaaaatttactttttaggttcattcatttaatgatgtatgtg 39333368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 51256562 - 51256628
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt 344  Q
    |||||| |||||||||||||||||| ||||  ||||||||||| |||| |||||| |||||||||||    
T  51256562 atactccctccgtttctaaatataaacaaattttactttttaggttcattcaattaatgatgtatgt 51256628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 278 - 342
Target Start/End: Complemental strand, 32998614 - 32998549
Alignment:
Q  278 catactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtat 342  Q
    ||||||||||||||||| |||||||||||||  ||| ||||||| |||| |||||| |||||||||    
T  32998614 catactctctccgtttcaaaatataagcaaattttaatttttaggttcattcaattaatgatgtat 32998549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 8126125 - 8126173
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||| ||||||||| |||||||||||||  |||||||||||||||||    
T  8126125 atactccctccgtttcaaaatataagcaaattttactttttagattcat 8126173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 345
Target Start/End: Complemental strand, 17005098 - 17005038
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||||| ||||||||||||| | ||||||||| |||| |||||| ||||||||||||    
T  17005098 ctccgtttctgaatataagcaaaattgactttttaggttcattcaattaatgatgtatgtg 17005038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 345
Target Start/End: Complemental strand, 42595875 - 42595815
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||  |||||||||||||  |||||||||||||||| |||||| ||||||||||||    
T  42595875 ctccgttttaaaatataagcaaattttactttttagattcattcaattaatgatgtatgtg 42595815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 342
Target Start/End: Complemental strand, 43351612 - 43351556
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtat 342  Q
    ||||||||||||||||||||||||| |||| |||| |||| |||||| |||||||||    
T  43351612 tccgtttctaaatataagcaaaactaacttgttaggttcattcaattaatgatgtat 43351556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 342
Target Start/End: Original strand, 43898096 - 43898152
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtat 342  Q
    ||||||| ||||||||||||||  |||||||||||||||| |||||| |||||||||    
T  43898096 tccgtttttaaatataagcaaattttactttttagattcattcaattaatgatgtat 43898152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 1927496 - 1927563
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||||||||||||||||||||| |||| ||| ||||||  |||| ||| || ||||||||||||    
T  1927496 atactctctccgtttctaaatataagtaaaatttattttttaagttcattcatttaatgatgtatgtg 1927563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 14626773 - 14626706
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||| | ||||||||||||||| | |||||||| ||||| |||||| ||||||||||||    
T  14626773 atactccctccgtctttaaatataagcaaaattgactttttaaattcattcaattaatgatgtatgtg 14626706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 22995691 - 22995758
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| ||||||||||||||||||| |||  ||||||||||| |||| | |||| ||||||||||||    
T  22995691 atactccctccgtttctaaatataagtaaattttactttttaggttcatttaattaatgatgtatgtg 22995758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 26770858 - 26770799
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||| |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  26770858 tccgtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 26770799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 34205558 - 34205625
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| ||||||||| |||||||||||||  ||||||||||| |||| |||||| |||||| |||||    
T  34205558 atactccctccgtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgcatgtg 34205625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 39148834 - 39148767
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| ||||||||| |||||||||||||| ||||||||||| || | ||| || ||||||||||||    
T  39148834 atactccctccgtttcaaaatataagcaaaatttactttttaggtttattcatttaatgatgtatgtg 39148767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 44435319 - 44435252
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| ||||||||| |||||||||||||  | ||||||||| |||| |||||| ||||||||||||    
T  44435319 atactccctccgtttcaaaatataagcaaatttcactttttaggttcattcaattaatgatgtatgtg 44435252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 44687896 - 44687943
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    ||||| |||||||||||||||||||||||| | |||||||| ||||||    
T  44687896 tactccctccgtttctaaatataagcaaaattcactttttaaattcat 44687943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 342
Target Start/End: Original strand, 46739303 - 46739366
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtat 342  Q
    ||||| |||||||||||||||| ||||||  ||||||||||| |||| |||||| |||||||||    
T  46739303 tactccctccgtttctaaatatgagcaaattttactttttaggttcattcaattaatgatgtat 46739366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 48895661 - 48895594
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattcat-caattcatgatgtatgtg 345  Q
    |||||| ||||||||  |||||||||||||| | ||||||||||||||| || || ||||||||||||    
T  48895661 atactccctccgttttaaaatataagcaaaattcactttttagattcatccatttaatgatgtatgtg 48895594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 341
Target Start/End: Complemental strand, 50623181 - 50623118
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgta 341  Q
    |||||| ||||||||| |||||||||||||  ||| |||||||||||| |||||| ||||||||    
T  50623181 atactccctccgtttcaaaatataagcaaattttattttttagattcattcaattaatgatgta 50623118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 327
Target Start/End: Complemental strand, 51256715 - 51256664
Alignment:
Q  276 tacatactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||||||  ||||||| ||||||||||||||  |||||||||||||||||    
T  51256715 tacatactccatccgtttataaatataagcaaattttactttttagattcat 51256664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 53718034 - 53717975
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||| |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  53718034 tccgtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 53717975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 4236576 - 4236642
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||| || |||||||||||||| ||||||||||| |||| ||| || ||||||||||||    
T  4236576 tactccctccgtgtcaaaatataagcaaaaattactttttaggttcattcatttaatgatgtatgtg 4236642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 12569247 - 12569181
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt 344  Q
    |||||| ||||||||  |||||||||||||  |||||||||||||||| |||||| || ||||||||    
T  12569247 atactccctccgttttaaaatataagcaaattttactttttagattcattcaattaataatgtatgt 12569181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 13545711 - 13545645
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt 344  Q
    |||||| ||||||||  |||||||||||||  |||||||||||||||| |||||| || ||||||||    
T  13545711 atactccctccgttttaaaatataagcaaattttactttttagattcattcaattaataatgtatgt 13545645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 16894314 - 16894248
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||||| ||||||||| ||||| | |||||||||||| | |||||| ||||||||||||    
T  16894314 tactccctccgtttttaaatataaacaaaattgactttttagatttattcaattaatgatgtatgtg 16894248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 17004954 - 17005020
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||||| ||||||||||||||| | | ||||||| |||| |||||| ||||||||||||    
T  17004954 tactccctccgtttttaaatataagcaaaattgattttttaggttcattcaattaatgatgtatgtg 17005020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 18481024 - 18480954
Alignment:
Q  276 tacatactctctccgtttctaaatataagcaaaacttactttttagattcat-caattcatgatgtatgtg 345  Q
    ||||||||  |||||||| ||||||||||||||  ||||||||||| || || ||||| ||||||||||||    
T  18481024 tacatacttcctccgtttttaaatataagcaaattttactttttaggtttatccaattaatgatgtatgtg 18480954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 32827424 - 32827490
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||| |||| |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  32827424 tactccctccatttcaaaatataagcaaactttactttttaggttcattcaattaatgatgtatgtg 32827490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 33639058 - 33638992
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||||| ||||||||||||||| | ||||||||| |||| ||| || ||||||||||||    
T  33639058 tactccctccgtttttaaatataagcaaaattcactttttaggttcattcatttaatgatgtatgtg 33638992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 40326582 - 40326516
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||| || |||||||||||||| | ||||||||| |||| |||||| ||||||||||||    
T  40326582 tactccctccgtatcaaaatataagcaaaattgactttttaggttcattcaattaatgatgtatgtg 40326516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 327
Target Start/End: Complemental strand, 4979745 - 4979704
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||||||||||||||||||||| | ||||||||| |||||    
T  4979745 ctccgtttctaaatataagcaaaattaactttttaggttcat 4979704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 343
Target Start/End: Original strand, 7328642 - 7328703
Alignment:
Q  283 tctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatg 343  Q
    ||||||||| | ||||||||||||||| ||||||||||| |||| ||| || ||||||||||    
T  7328642 tctctccgtatttaaatataagcaaaaattactttttaggttcattcatttaatgatgtatg 7328703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 345
Target Start/End: Complemental strand, 17501540 - 17501483
Alignment:
Q  289 cgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||||||||| | ||||||| |||||| |||||| ||||||||||||    
T  17501540 cgtttttaaatataagcaaaattgacttttttgattcattcaattaatgatgtatgtg 17501483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 22995839 - 22995774
Alignment:
Q  281 actctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||| |||||||| ||||||||||||||  || |||||||| |||| |||||| ||||||||||||    
T  22995839 actccctccgtttttaaatataagcaaattttgctttttaggttcattcaattaatgatgtatgtg 22995774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 327
Target Start/End: Complemental strand, 32956556 - 32956515
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    ||||||||||||||||||| |||| | |||||||||||||||    
T  32956556 ctccgtttctaaatataagtaaaattgactttttagattcat 32956515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 343
Target Start/End: Complemental strand, 40628803 - 40628746
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatg 343  Q
    ||||||| ||||||||||||||| | |||||||||||||| |||| | ||||||||||    
T  40628803 tccgtttttaaatataagcaaaaataactttttagattcattcaactaatgatgtatg 40628746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 327
Target Start/End: Original strand, 46843638 - 46843679
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||||| ||||||||| ||||| |||||||||||||||||    
T  46843638 ctccgtttttaaatataaacaaaatttactttttagattcat 46843679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 345
Target Start/End: Complemental strand, 46967608 - 46967535
Alignment:
Q  273 ttatacatactctctccgtttctaaatataagcaaaacttactttttagattcat-caattcatgatgtatgtg 345  Q
    |||||| ||||| |||||| | ||||||||||||||| | ||||||||| ||||| || || ||||||||||||    
T  46967608 ttatacgtactccctccgtctttaaatataagcaaaattgactttttaggttcatccatttaatgatgtatgtg 46967535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 403
Target Start/End: Complemental strand, 51486488 - 51486435
Alignment:
Q  351 cacatatatcattaattg-atgaacctacaaagtaaattttacttatatctaaa 403  Q
    |||||||||||||||||| ||||||||| ||||| |||||| ||||||| ||||    
T  51486488 cacatatatcattaattgaatgaacctaaaaagtcaattttgcttatatttaaa 51486435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 5790639 - 5790711
Alignment:
Q  274 tatacatactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||||| ||||||||  | |||||||||||  ||||||||||| |||| |||||| || |||||||||    
T  5790639 tatacatactccctccgttttaatatataagcaaattttactttttaggttcattcaattaataatgtatgtg 5790711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 7672688 - 7672736
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||| ||||||||| ||||||||| |||  |||||||||||||||||    
T  7672688 atactccctccgtttcaaaatataagaaaattttactttttagattcat 7672736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 25245285 - 25245245
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||||||||||||||| |||| | |||||||||||||||    
T  25245285 tccgtttctaaatataagtaaaattgactttttagattcat 25245245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 403
Target Start/End: Original strand, 38446817 - 38446869
Alignment:
Q  351 cacatatatcattaattgatgaacctacaaagtaaattttacttatatctaaa 403  Q
    |||||| |||||||||  ||||||||| ||||| |||||||||||||| ||||    
T  38446817 cacatacatcattaatgaatgaacctaaaaagtcaattttacttatatttaaa 38446869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 42631775 - 42631841
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||| |||||| ||||||||||||    
T  42631775 tactccctccgtttctaaatataagcaaattttactttttagattcattcaattaatgatgtatgtg 42631841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 286 - 345
Target Start/End: Original strand, 40716748 - 40716808
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||||||||||||||||||  |||||||||||||||| |||||| ||||||||||||    
T  40716748 ctccgtttctaaatataagcaaattttactttttagattcattcaattaatgatgtatgtg 40716808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 275 - 345
Target Start/End: Original strand, 40802194 - 40802265
Alignment:
Q  275 atacatactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||||| |||||||||||||||||||||||  ||||||||||  |||| |||||| ||||||||||||    
T  40802194 atacatactccctccgtttctaaatataagcaaattttactttttaagttcattcaattaatgatgtatgtg 40802265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 34194556 - 34194622
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| |||||||||||||  |||||||||||||||| |||||| ||||||||||||    
T  34194556 tactccctccgtttcaaaatataagcaaattttactttttagattcattcaattaatgatgtatgtg 34194622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 35201871 - 35201919
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    ||||||| ||||||||||||||||||||||| ||||||||||| |||||    
T  35201871 atactctatccgtttctaaatataagcaaaatttactttttaggttcat 35201919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 899241 - 899308
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||||| |||| ||||||||||||||| ||||| ||||| |||| |||||| ||||||||||||    
T  899241 atactctctctgtttttaaatataagcaaaatttactatttaggttcattcaattaatgatgtatgtg 899308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 9203529 - 9203462
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||||| ||||||||||||||||| ||||||| | |||| |||||| ||||||||||||    
T  9203529 atactccctccgtttttaaatataagcaaaactgacttttttggttcattcaattaatgatgtatgtg 9203462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 41178103 - 41178036
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||||||||||||||||||| ||||  | |||||||||||||| |||||| |||||| |||||    
T  41178103 atactctctccgtttctaaatataaacaaatttgactttttagattcattcaattaatgatgcatgtg 41178036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 43484077 - 43484010
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||||| ||||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  43484077 atactccctccgtttttaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 43484010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 32480340 - 32480274
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  32480340 tactccctccgtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 32480274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 37922956 - 37922890
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  37922956 tactccctccgtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 37922890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 24726180 - 24726119
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatg 339  Q
    ||||||| ||||||||||||||||||||||  ||||||||||| |||| |||||| ||||||    
T  24726180 atactctatccgtttctaaatataagcaaatattactttttaggttcattcaattaatgatg 24726119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 34194704 - 34194639
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt 344  Q
    ||||| ||||||||| |||||||||||||  ||||||||||| |||| |||||| |||||||||||    
T  34194704 tactccctccgtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgt 34194639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 40739638 - 40739569
Alignment:
Q  277 acatactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||| ||||||||| |||||||||||||| ||||||||||| || | ||| || ||||||||||||    
T  40739638 acatactccctccgtttcaaaatataagcaaaatttactttttaggtttattcatttaatgatgtatgtg 40739569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 32484944 - 32485003
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||| |||||||||||||  |||||||||||||||| |||||| || |||||||||    
T  32484944 tccgtttcaaaatataagcaaattttactttttagattcattcaattaattatgtatgtg 32485003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 44838777 - 44838836
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||| ||||||||||||||| | |||||||||||| | |||||| ||||||||||||    
T  44838777 tccgtttttaaatataagcaaaattgactttttagatttattcaattaatgatgtatgtg 44838836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 4786695 - 4786745
Alignment:
Q  277 acatactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||||| ||||||||| |||||||||||||| | ||||||||| |||||    
T  4786695 acatactccctccgtttcaaaatataagcaaaattcactttttaggttcat 4786745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 5526641 - 5526575
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| |||||||||||||| | ||||||||| |||| ||| || ||||||||||||    
T  5526641 tactccctccgtttcaaaatataagcaaaattcactttttaggttcattcatttaatgatgtatgtg 5526575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 398
Target Start/End: Original strand, 17911358 - 17911477
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtgtttatcacatatatcattaattg-atgaacct 376  Q
    |||||| |||||| || |||||||||||||  ||||||||||| |||| ||||||  |||||||| ||   | |||||| |||| |||||| ||||||||    
T  17911358 atactccctccgtctcaaaatataagcaaattttactttttaggttcattcaattagtgatgtatatg--gaccacatacatcactaattgaatgaacct 17911455  T
Q  377 acaaagtaaattttacttatat 398  Q
    | |||||||| ||| |||||||    
T  17911456 aaaaagtaaaatttgcttatat 17911477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 26492453 - 26492387
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||||| ||||||||| ||||| ||||||||||| |||| | |||| ||||||||||||    
T  26492453 tactccctccgtttttaaatataaacaaaatttactttttaggttcattgaattaatgatgtatgtg 26492387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 38815950 - 38815900
Alignment:
Q  277 acatactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||||| ||||||||| |||||||||||||| | ||||||||| |||||    
T  38815950 acatactccctccgtttcaaaatataagcaaaattcactttttaggttcat 38815900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 38883942 - 38884008
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| |||||||||||||  ||| ||||||| |||| |||||| ||||||||||||    
T  38883942 tactccctccgtttcaaaatataagcaaattttattttttaggttcattcaattaatgatgtatgtg 38884008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 43483928 - 43483994
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||||  ||||||||||||||  | |||||||||||||| |||||| ||||||||||||    
T  43483928 tactccctccgttcttaaatataagcaaatttcactttttagattcattcaattaatgatgtatgtg 43483994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 327
Target Start/End: Original strand, 13832467 - 13832516
Alignment:
Q  278 catactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    ||||||| ||||||||| ||||||||| |||| ||| |||||||||||||    
T  13832467 catactccctccgtttcaaaatataagtaaaatttattttttagattcat 13832516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 327
Target Start/End: Complemental strand, 27184352 - 27184311
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    ||||||||| |||||||||||||| ||||||||||| |||||    
T  27184352 ctccgtttcaaaatataagcaaaatttactttttaggttcat 27184311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 345
Target Start/End: Original strand, 2827350 - 2827418
Alignment:
Q  278 catactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||||||||||| |||||||||| |||| | ||||||||  |||| ||| || ||||||||||||    
T  2827350 catactctctccgtttttaaatataagtaaaattgactttttaagttcattcatttaatgatgtatgtg 2827418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 290 - 345
Target Start/End: Complemental strand, 27782018 - 27781962
Alignment:
Q  290 gtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||||||||||||||  |||||||||||  ||| |||||| ||||||||||||    
T  27782018 gtttctaaatataagcaaattttactttttagggtcattcaattaatgatgtatgtg 27781962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 38884081 - 38884025
Alignment:
Q  289 cgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt 344  Q
    |||||| |||||||||||||  ||||||||||| |||| |||||| |||||||||||    
T  38884081 cgtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgt 38884025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 30202629 - 30202563
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt 344  Q
    |||||| |||||||||||||||||||||||||| ||||||||| |||| |||||| |||||||||||    
T  30202629 atactccctccgtttctaaatataagcaaaactgactttttaggttcattcaattaatgatgtatgt 30202563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 38262122 - 38262006
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtgtt---tatcacatatatcattaattg-atgaacctacaaa 381  Q
    ||||||| ||||||||||||||  ||| ||||||| |||| |||||| |||||||||||| |   ||||||||| ||||||||||| ||||||||| |||    
T  38262122 tccgtttttaaatataagcaaattttattttttaggttcattcaattaatgatgtatgtgatccatatcacatacatcattaattgaatgaacctaaaaa 38262023  T
Q  382 gtaaattttacttatat 398  Q
    || || |||||||||||    
T  38262022 gtcaaatttacttatat 38262006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 278 - 345
Target Start/End: Original strand, 9157968 - 9158036
Alignment:
Q  278 catactctctccgtttctaaatataagcaaaacttactttttagattc-atcaattcatgatgtatgtg 345  Q
    ||||||| |||||||||||||||||||||||  |||||||||||||||  |||||| ||||||||||||    
T  9157968 catactccctccgtttctaaatataagcaaattttactttttagattctttcaattaatgatgtatgtg 9158036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 40669108 - 40669060
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||    
T  40669108 atactccctccgtttctaaatataagcaaaatttactttttagattcat 40669060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 4898160 - 4898227
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||||||||||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  4898160 atactccctccgtttctaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 4898227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 4945554 - 4945621
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||||||||||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  4945554 atactccctccgtttctaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 4945621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 37486144 - 37486077
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||||||||||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  37486144 atactccctccgtttctaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 37486077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 324792 - 324857
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt 344  Q
    |||||||||||||||||||||||||||||  ||||||||||  |||| |||||| |||||||||||    
T  324792 tactctctccgtttctaaatataagcaaattttactttttaagttcattcaattaatgatgtatgt 324857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 24971200 - 24971267
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| ||||||||| |||||||||||||  |||||||||||||||| |||| | ||||||||||||    
T  24971200 atactccctccgtttcaaaatataagcaaattttactttttagattcattcaactaatgatgtatgtg 24971267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 25668556 - 25668489
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||||||||||||||||||||  ||||||||||| |||| | |||| ||||||||||||    
T  25668556 atactccctccgtttctaaatataagcaaattttactttttaggttcatttaattaatgatgtatgtg 25668489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 36490616 - 36490557
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||||||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  36490616 tccgtttctaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 36490557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 44402229 - 44402162
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||||||||||| |||||||||||||| | ||||||||| |||| ||| || ||||||||||||    
T  44402229 atactctctccgtttcaaaatataagcaaaattcactttttaggttcattcatttaatgatgtatgtg 44402162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 26567632 - 26567698
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  26567632 tactccctccgtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 26567698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 40340613 - 40340547
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  40340613 tactccctccgtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 40340547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 44949338 - 44949404
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||||||||||||||||||||| | ||||||||| |||| ||| || ||||||||||||    
T  44949338 tactccctccgtttctaaatataagcaaaattgactttttaggttcattcatttaatgatgtatgtg 44949404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 14937636 - 14937676
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    ||||||||||||||||||||||| | |||||||||||||||    
T  14937636 tccgtttctaaatataagcaaaattgactttttagattcat 14937676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 29573809 - 29573857
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||| |||||||| ||||||||||||||| | |||||||||||||||    
T  29573809 atactccctccgtttttaaatataagcaaaattgactttttagattcat 29573857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 34438882 - 34438842
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    ||||||||||||||||||||||| | |||||||||||||||    
T  34438882 tccgtttctaaatataagcaaaattaactttttagattcat 34438842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 324938 - 324874
Alignment:
Q  277 acatactctctccgtttctaaatataagcaaaacttactttttagattcatcaattcatgatgtatgtg 345  Q
    ||||||||| ||||||||||||||||||||||  |||||||| || |||    ||||||||||||||||    
T  324938 acatactctatccgtttctaaatataagcaaattttacttttgaggttc----attcatgatgtatgtg 324874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 2795451 - 2795388
Alignment:
Q  283 tctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||||||  |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  2795451 tctctccgttttaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 2795388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 7728428 - 7728495
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| ||||||||| |||||||||||||| | | |||||||||||| ||| || ||||||||||||    
T  7728428 atactccctccgtttcaaaatataagcaaaattcagtttttagattcagtcatttaatgatgtatgtg 7728495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 29771721 - 29771780
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||| |||||||| ||||  |||||||||||||||| |||||| ||||||||||||    
T  29771721 tccgtttcaaaatataaacaaattttactttttagattcattcaattaatgatgtatgtg 29771780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 327
Target Start/End: Original strand, 31211739 - 31211778
Alignment:
Q  288 ccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||||||||||||||||||  |||||||||||||||||    
T  31211739 ccgtttctaaatataagcaaattttactttttagattcat 31211778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 37485975 - 37486034
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||||||||||||||||  ||||||||||  |||| |||||| ||||||||||||    
T  37485975 tccgtttctaaatataagcaaattttactttttatgttcattcaattaatgatgtatgtg 37486034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 40340464 - 40340531
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| ||||||||| |||||||||||||  ||||||||||| |||| |||| | ||||||||||||    
T  40340464 atactccctccgtttcaaaatataagcaaattttactttttaggttcattcaactgatgatgtatgtg 40340531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 4898309 - 4898243
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||||||||||||||| ||||  |||||||| || |||| |||||| ||||||||||||    
T  4898309 tactccctccgtttctaaatataaacaaattttacttttgaggttcattcaattaatgatgtatgtg 4898243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 4945703 - 4945637
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||||||||||||||| ||||  |||||||| || |||| |||||| ||||||||||||    
T  4945703 tactccctccgtttctaaatataaacaaattttacttttgaggttcattcaattaatgatgtatgtg 4945637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 5094968 - 5094918
Alignment:
Q  296 aaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||||||||| |||||||||||||||| ||| || ||||||||||||    
T  5094968 aaatataagcaaaatttactttttagattcattcatttaatgatgtatgtg 5094918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 10041538 - 10041604
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||||||||||||| |||  |||| ||||||||||| | |||| ||||||||||||    
T  10041538 tactccctccgtttctaaatataagaaaattttacattttagattcatttaattaatgatgtatgtg 10041604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 10099548 - 10099614
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||||||||||||||||||||  |||| |||||| |||| | |||| ||||||||||||    
T  10099548 tactccctccgtttctaaatataagcaaattttacattttaggttcatttaattaatgatgtatgtg 10099614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 25668407 - 25668473
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||||||||||||||| ||||  || |||||||| |||| |||||| ||||||||||||    
T  25668407 tactccctccgtttctaaatataaacaaattttgctttttaggttcattcaattaatgatgtatgtg 25668473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 266 - 327
Target Start/End: Complemental strand, 31596956 - 31596894
Alignment:
Q  266 atttcctttata-catactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||||||||  ||||||| |||||||| ||| ||||||||||| ||||||||||| |||||    
T  31596956 atttcctttatttcatactccctccgtttataattataagcaaaatttactttttaggttcat 31596894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 32473467 - 32473533
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||| ||| ||||||||||||||  ||| |||||||||||| |||||| ||||||||||||    
T  32473467 tactccctccatttttaaatataagcaaattttattttttagattcattcaattaatgatgtatgtg 32473533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 34911242 - 34911176
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||| ||||  |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  34911242 tactctctctgttttaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 34911176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 390
Target Start/End: Complemental strand, 40320196 - 40320154
Alignment:
Q  349 atcacatatatcattaattg-atgaacctacaaagtaaatttt 390  Q
    |||||||||||||||||||| ||||||||| ||||||||||||    
T  40320196 atcacatatatcattaattgaatgaacctaaaaagtaaatttt 40320154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 42230518 - 42230584
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||| | ||||||||||||||| | |||||||||||||| ||| || ||||||||||||    
T  42230518 tactccctccgtctttaaatataagcaaaattgactttttagattcattcatttaatgatgtatgtg 42230584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 42579163 - 42579097
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||| ||| |||||||||| |||  |||||||||||||||| |||||| ||||||||||||    
T  42579163 tactccctccatttttaaatataagtaaattttactttttagattcattcaattaatgatgtatgtg 42579097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 45123939 - 45123873
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||||||||||||| |||  ||||||||||| |||| |||||| || |||||||||    
T  45123939 tactccctccgtttctaaatataagtaaattttactttttaggttcattcaattaataatgtatgtg 45123873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 24971349 - 24971284
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt 344  Q
    ||||| |||| |||| |||||||||||||  ||||||||||| |||| |||||| |||||||||||    
T  24971349 tactccctccatttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgt 24971284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 28680986 - 28680917
Alignment:
Q  277 acatactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||  ||||||| ||||||||| ||||  || ||||||||||||| |||||| ||||||||||||    
T  28680986 acatactccatccgtttttaaatataaacaaatttttctttttagattcattcaattaatgatgtatgtg 28680917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 327
Target Start/End: Original strand, 33363553 - 33363602
Alignment:
Q  278 catactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    ||||||| |||||||| |||||||||||||||  |||||||||| |||||    
T  33363553 catactccctccgtttttaaatataagcaaaatctactttttaggttcat 33363602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 404
Target Start/End: Original strand, 3463226 - 3463282
Alignment:
Q  349 atcacatatatcattaattga-tgaacctacaaagtaaattttacttatatctaaag 404  Q
    |||||||| |||||||| ||| |||||||| ||||| |||||||||||||| |||||    
T  3463226 atcacatacatcattaaatgaatgaacctaaaaagtcaattttacttatatttaaag 3463282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 6006677 - 6006725
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    ||||||||||||||| |||||||||  |||| | |||||||||||||||    
T  6006677 atactctctccgtttttaaatataaataaaattgactttttagattcat 6006725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 345
Target Start/End: Original strand, 20195291 - 20195351
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||  ||||||||| |||  |||||||||||||||| |||||| ||||||||||||    
T  20195291 ctccgttttaaaatataagtaaattttactttttagattcattcaattaatgatgtatgtg 20195351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 33150068 - 33150136
Alignment:
Q  277 acatactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt 344  Q
    |||||||  ||||||| |||||||||||||||  ||||||||||| || | |||||| |||||||||||    
T  33150068 acatacttcctccgttcctaaatataagcaaattttactttttaggtttattcaattaatgatgtatgt 33150136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 342
Target Start/End: Original strand, 34438748 - 34438804
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtat 342  Q
    |||||||||||||||||| |||| | ||||| |||||||| |||||| |||||||||    
T  34438748 tccgtttctaaatataagtaaaattgactttctagattcattcaattaatgatgtat 34438804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 37131822 - 37131750
Alignment:
Q  274 tatacatactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||| ||||||| |||||||| |||||||||||||  |||| ||||| ||||| |||||| ||||| ||||||    
T  37131822 tatatatactctatccgtttcaaaatataagcaaattttacgttttatattcattcaattaatgatttatgtg 37131750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 398
Target Start/End: Complemental strand, 40739554 - 40739506
Alignment:
Q  351 cacatatatcattaattg-atgaacctacaaagtaaattttacttatat 398  Q
    |||||||||||||||||| ||||||||| |||||||| ||| |||||||    
T  40739554 cacatatatcattaattgaatgaacctaaaaagtaaaatttgcttatat 40739506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 342
Target Start/End: Complemental strand, 43514893 - 43514837
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtat 342  Q
    |||||||| |||||||||||||  ||||||||||| |||| |||||| |||||||||    
T  43514893 tccgtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtat 43514837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 11729 - 11662
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||||||||||||||||| ||| ||||||||||| |||| |||||| ||||||||||||    
T  11729 atactccctccgtttctaaatataagccaaatttactttttaggttcattcaattaatgatgtatgtg 11662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 345
Target Start/End: Original strand, 11591 - 11646
Alignment:
Q  291 tttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||||||||| ||| ||||||||||| |||| |||||| ||||||||||||    
T  11591 tttctaaatataagccaaatttactttttaggttcattcaattaatgatgtatgtg 11646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 7345043 - 7344976
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||||||||||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  7345043 atactccctccgtttctaaatataagcaaattttactttttagtttcattcaattaatgatgtatgtg 7344976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 20353222 - 20353156
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt 344  Q
    |||||| |||||||||||||||||| ||||  |||||||||||||||| |||||| |||||||||||    
T  20353222 atactccctccgtttctaaatataatcaaattttactttttagattcattcaattaatgatgtatgt 20353156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 398
Target Start/End: Original strand, 3498296 - 3498420
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt-gtttat---------cacatatatcattaattg-atgaa 373  Q
    ||||||||  |||||||||||||  |||||||||||||||| |||||| ||||||||||| ||||||         |||||| ||||||||||| |||||    
T  3498296 ctccgttttaaaatataagcaaattttactttttagattcattcaattaatgatgtatgtggtttataatatggaccacatacatcattaattgaatgaa 3498395  T
Q  374 cctacaaagtaaattttacttatat 398  Q
    |||| |||||||| |||||||||||    
T  3498396 cctaaaaagtaaaatttacttatat 3498420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 347
Target Start/End: Complemental strand, 46658876 - 46658808
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtgtt 347  Q
    ||||| ||||||||  |||||||||||||  |||||||||||||||| |||||| ||||||||||||||    
T  46658876 tactccctccgttttaaaatataagcaaattttactttttagattcattcaattaatgatgtatgtgtt 46658808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 398
Target Start/End: Original strand, 5212057 - 5212169
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtgtttatcacatatatcattaattg-atgaacctacaaagt 383  Q
    ||||||||| |||||||| ||||| | | |||||||||||| ||| || ||||||||||||   | |||||| |||||||| || ||||||||| |||||    
T  5212057 ctccgtttcaaaatataaccaaaattcattttttagattcattcatttaatgatgtatgtg--aaccacatacatcattaaatgaatgaacctaaaaagt 5212154  T
Q  384 aaattttacttatat 398  Q
     ||||||||||||||    
T  5212155 gaattttacttatat 5212169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 35160752 - 35160811
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||||||||||||||||| | ||||||||| |||| |||||| ||||||||||||    
T  35160752 tccgtttctaaatataagcaaaattgactttttaggttcattcaattaatgatgtatgtg 35160811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 43067027 - 43067086
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||| |||||||||||||| ||||||||||| |||| |||||| ||||||||||||    
T  43067027 tccgtttcaaaatataagcaaaatttactttttaggttcattcaattaatgatgtatgtg 43067086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 25486860 - 25486794
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||||||| || |||||||||||||| ||||||||||| |||| ||| || ||||||||||||    
T  25486860 tactctctccgtgtcaaaatataagcaaaatttactttttaggttcattcatttaatgatgtatgtg 25486794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 28003322 - 28003256
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  28003322 tactccctccgtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 28003256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 46658727 - 46658793
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt 344  Q
    |||||||||||||||  |||||||||||||  ||||||||||| |||| |||||| |||||||||||    
T  46658727 atactctctccgttttaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgt 46658793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 285 - 345
Target Start/End: Original strand, 19531954 - 19532015
Alignment:
Q  285 tctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||||| |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  19531954 tctccgtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 19532015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 27940892 - 27940823
Alignment:
Q  277 acatactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||| ||||||||| |||||||||||||  ||||||||||| |||| | |||| ||||||||||||    
T  27940892 acatactccctccgtttcaaaatataagcaaattttactttttaggttcattgaattaatgatgtatgtg 27940823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 341
Target Start/End: Complemental strand, 45833328 - 45833272
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgta 341  Q
    |||||||| ||||||||||||||  |||||||||||||||| |||||| ||||||||    
T  45833328 ctccgtttttaaatataagcaaattttactttttagattcattcaattaatgatgta 45833272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 4027220 - 4027279
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt 344  Q
    |||||||||||||||||||||||| | | |||||||||||| ||| || |||||||||||    
T  4027220 ctccgtttctaaatataagcaaaattgagtttttagattcattcatttaatgatgtatgt 4027279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 5691621 - 5691554
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||||| ||||||||||||||  |||| ||||| ||||| |||||| ||||||||||||    
T  5691621 atactcactccgtttttaaatataagcaaattttacattttaaattcattcaattaatgatgtatgtg 5691554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 20353060 - 20353119
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||| ||||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  20353060 tccgtttttaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 20353119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 24936677 - 24936724
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||||||||||| ||||||||||||||| | | |||||||||||||    
T  24936677 tactctctccgtttttaaatataagcaaaattgattttttagattcat 24936724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 33471485 - 33471552
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||| || |||||||||||||  ||| |||||||||||| |||||| ||||||||||||    
T  33471485 atactccctccgtctcaaaatataagcaaattttattttttagattcattcaattaatgatgtatgtg 33471552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 34907660 - 34907727
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| ||||||||| ||||||||| |||| ||||||||||| |||| ||| || ||||||||||||    
T  34907660 atactccctccgtttcaaaatataagtaaaatttactttttaggttcattcattttatgatgtatgtg 34907727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 37066177 - 37066244
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||| || |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  37066177 atactccctccgtctcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 37066244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 48590580 - 48590647
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||||||||||||||| ||||  ||||||||||| |||| | |||| ||||||||||||    
T  48590580 atactccctccgtttctaaatataaacaaattttactttttaggttcattaaattaatgatgtatgtg 48590647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 27942469 - 27942403
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| |||||||||||||  ||||||||||  |||| |||||| ||||||||||||    
T  27942469 tactccctccgtttcaaaatataagcaaattttactttttaagttcattcaattaatgatgtatgtg 27942403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 33471634 - 33471568
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||||||||| ||||||||| |||  ||| ||||||| |||| |||||| ||||||||||||    
T  33471634 tactctctccgtttcaaaatataagtaaattttattttttaggttcattcaattaatgatgtatgtg 33471568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 34907809 - 34907743
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| |||||||||||||| ||||||| ||| |||| ||| || ||||||||||||    
T  34907809 tactccctccgtttcaaaatataagcaaaatttactttataggttcattcatttaatgatgtatgtg 34907743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 35160896 - 35160846
Alignment:
Q  277 acatactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||||| |||||||| ||||||||||||||| | ||||||||| |||||    
T  35160896 acatactccctccgtttttaaatataagcaaaattgactttttaggttcat 35160846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 37066326 - 37066260
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||  |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  37066326 tactccctccgttttaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 37066260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 398
Target Start/End: Original strand, 46477145 - 46477259
Alignment:
Q  296 aaatataagcaaaacttactttttagattcat-caattcatgatgtatgtg-tttat---------cacatatatcattaattga-tgaacctacaaagt 383  Q
    |||||||||||||  ||||||||||| ||||| ||||| |||||||||||| |||||         |||||| |||||||||||| |||||||| |||||    
T  46477145 aaatataagcaaattttactttttaggttcattcaattaatgatgtatgtggtttataatatggaccacatacatcattaattgaatgaacctaaaaagt 46477244  T
Q  384 aaattttacttatat 398  Q
    ||| |||||||||||    
T  46477245 aaaatttacttatat 46477259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 398
Target Start/End: Complemental strand, 46774659 - 46774544
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtgtttatcacatatatcattaattgatgaacctac 378  Q
    ||||| ||||||||||||||||||| |||  |||| |||||| |||| ||||||  ||||||||||| ||    |||| ||||||||   |||||| ||     
T  46774659 tactccctccgtttctaaatataagtaaattttaccttttaggttcattcaattattgatgtatgtggtt----catacatcattaaaaaatgaacttaa 46774564  T
Q  379 aaagtaaattttacttatat 398  Q
    |||||||| |||||||||||    
T  46774563 aaagtaaaatttacttatat 46774544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 403
Target Start/End: Complemental strand, 13846772 - 13846719
Alignment:
Q  351 cacatatatcattaattga-tgaacctacaaagtaaattttacttatatctaaa 403  Q
    |||||| |||||||||||| |||||||| |||||||| ||||||||||| ||||    
T  13846772 cacatacatcattaattgaatgaacctaaaaagtaaaatttacttatatttaaa 13846719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 32408239 - 32408170
Alignment:
Q  277 acatactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||| || |||||| |||||||||||||| | ||||||||| |||| ||| || ||||||||||||    
T  32408239 acatactcccttcgtttcaaaatataagcaaaattcactttttaggttcattcatttaatgatgtatgtg 32408170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 327
Target Start/End: Complemental strand, 43093555 - 43093514
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||||| ||||||||||||||| ||||||||||| |||||    
T  43093555 ctccgtttttaaatataagcaaaatttactttttaggttcat 43093514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 327
Target Start/End: Original strand, 48135460 - 48135509
Alignment:
Q  278 catactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    ||||||| |||||| | ||||||||||||||  |||||||||||||||||    
T  48135460 catactccctccgtatttaaatataagcaaattttactttttagattcat 48135509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 7208659 - 7208707
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||| ||||| || ||||||||||||||||| || ||||||||||||    
T  7208659 atactccctccgattttaaatataagcaaaactcacattttagattcat 7208707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 14206480 - 14206408
Alignment:
Q  274 tatacatactctctccgtttctaaatataagcaaaacttactttttagattc-atcaattcatgatgtatgtg 345  Q
    |||| |||||| |||||||||||||||||||||||  | ||||||||| |||  |||||| ||||| ||||||    
T  14206480 tatatatactccctccgtttctaaatataagcaaatttgactttttaggttcgttcaattaatgatctatgtg 14206408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 14215170 - 14215098
Alignment:
Q  274 tatacatactctctccgtttctaaatataagcaaaacttactttttagattc-atcaattcatgatgtatgtg 345  Q
    |||| |||||| |||||||||||||||||||||||  | ||||||||| |||  |||||| ||||| ||||||    
T  14215170 tatatatactccctccgtttctaaatataagcaaatttgactttttaggttcgttcaattaatgatctatgtg 14215098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 25486711 - 25486759
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||| |||||| || |||||||||||||| ||||||||||| |||||    
T  25486711 atactccctccgtgtcaaaatataagcaaaaattactttttaggttcat 25486759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 345
Target Start/End: Complemental strand, 31365706 - 31365646
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||||||||| |||||||  ||||||| |||||| | |||||| ||||||||||||    
T  31365706 ctccgtttctaaatagaagcaaattttactttctagatttattcaattaatgatgtatgtg 31365646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 345
Target Start/End: Complemental strand, 38391955 - 38391895
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||||||||||||||||||  |||| |||||| |||| | |||| ||||||||||||    
T  38391955 ctccgtttctaaatataagcaaattttacattttaggttcatttaattaatgatgtatgtg 38391895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 398
Target Start/End: Original strand, 40002763 - 40002811
Alignment:
Q  351 cacatatatcattaattga-tgaacctacaaagtaaattttacttatat 398  Q
    |||||| |||||||| ||| |||||||| ||||||||||||||||||||    
T  40002763 cacatacatcattaaatgaatgaacctaaaaagtaaattttacttatat 40002811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 398
Target Start/End: Complemental strand, 43067086 - 43067038
Alignment:
Q  351 cacatatatcattaattga-tgaacctacaaagtaaattttacttatat 398  Q
    |||||| |||||||||||| |||||||| |||||||||||| |||||||    
T  43067086 cacatacatcattaattgaatgaacctaaaaagtaaattttgcttatat 43067038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 345
Target Start/End: Original strand, 45833192 - 45833252
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||| ||||||||| ||||  ||||||||||| |||| |||||| ||||||||||||    
T  45833192 ctccgtttttaaatataaacaaattttactttttaggttcattcaattaatgatgtatgtg 45833252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 398
Target Start/End: Complemental strand, 11989286 - 11989160
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtgttt------atcacatatatcattaattg-atg 371  Q
    ||||| ||||||||| |||||||||||||  ||||||||||| |||| |||||| |||||||||||| ||      | |||||| ||||||||||| |||    
T  11989286 tactccctccgtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtggttcataagaccacatacatcattaattgaatg 11989187  T
Q  372 aacctacaaagtaaattttacttatat 398  Q
    |||||| |||||||| ||| |||||||    
T  11989186 aacctaaaaagtaaaatttgcttatat 11989160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 7418865 - 7418937
Alignment:
Q  274 tatacatactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||| ||||||  ||||||||||||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  7418865 tataaatactccttccgtttctaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 7418937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 2693807 - 2693740
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||||||||| |||||||||||||||  |||||||||| |||| ||| || ||||||||||||    
T  2693807 atactctctccgtttttaaatataagcaaaatctactttttaggttcattcatttaatgatgtatgtg 2693740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 3750349 - 3750279
Alignment:
Q  276 tacatactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||| |||||| || |||||||||||||| | |||||||||||||| ||| || ||||||||||||    
T  3750349 tacatactccctccgtatcaaaatataagcaaaattgactttttagattcattcatttaatgatgtatgtg 3750279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 10118614 - 10118680
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||||||||| |||||||||||||| | ||||||||| |||| ||| || ||||||||||||    
T  10118614 tactctctccgtttcaaaatataagcaaaattcactttttaggttcattcatttaatgatgtatgtg 10118680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 10731617 - 10731551
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  10731617 tactccctccgtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 10731551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 398
Target Start/End: Original strand, 11989142 - 11989268
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg--tttat----cacatatatcattaattg-atg 371  Q
    ||||| |||||| || |||||||||||||  ||||||||||| |||| |||||| ||||||||||||   ||||    |||||| ||||||||||| |||    
T  11989142 tactccctccgtctcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtggtcttatgaaccacatacatcattaattgaatg 11989241  T
Q  372 aacctacaaagtaaattttacttatat 398  Q
    |||||| |||||||| ||| |||||||    
T  11989242 aacctaaaaagtaaaatttgcttatat 11989268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 32786260 - 32786194
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  32786260 tactccctccgtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 32786194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 350
Target Start/End: Original strand, 383602 - 383674
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtgtttat 350  Q
    |||||| ||||||||| |||||||||||||| | ||||||||| |||| ||| || |||||||||||| ||||    
T  383602 atactccctccgtttcaaaatataagcaaaattcactttttaggttcattcatttaatgatgtatgtggttat 383674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 403
Target Start/End: Original strand, 7246879 - 7247002
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtgtttatcacatatatcattaattg-atgaacct 376  Q
    |||||| |||| ||| ||||||||||||||| | || |||||| |||| |||||| |||||||||||| |   ||||||||| |||||||| ||||||||    
T  7246879 atactcactccatttataaatataagcaaaattgac-ttttaggttcattcaattaatgatgtatgtggt--ccacatatattattaattgaatgaacct 7246975  T
Q  377 acaaagtaaattttacttatatctaaa 403  Q
    | ||| | ||||||| |||||| ||||    
T  7246976 aaaaaattaattttatttatatttaaa 7247002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 10731468 - 10731535
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| ||||||||| |||||||||||||  ||||||||||| |||| ||| || ||||||||||||    
T  10731468 atactccctccgtttcaaaatataagcaaattttactttttaggttcattcatttaatgatgtatgtg 10731535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 12349952 - 12349893
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||| ||||||||| |||| |||||||||||||||| ||| || ||||||||||||    
T  12349952 tccgtttcaaaatataagtaaaatttactttttagattcattcatttaatgatgtatgtg 12349893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 19687473 - 19687528
Alignment:
Q  290 gtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt 344  Q
    |||||||||||||||||||  ||||||||||| |||| |||||| |||||||||||    
T  19687473 gtttctaaatataagcaaattttactttttaggttcattcaattaatgatgtatgt 19687528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 21478548 - 21478615
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||| || |||||||| ||||| | |||||||||||||| |||||| ||||||||||||    
T  21478548 atactccctccgtatcaaaatataaacaaaattgactttttagattcattcaattaatgatgtatgtg 21478615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 22495641 - 22495574
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||| | ||||||||||||||  |||||||||||||||| ||| || ||||||||||||    
T  22495641 atactccctccgtatttaaatataagcaaacattactttttagattcattcatttgatgatgtatgtg 22495574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 26295369 - 26295436
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattcat-caattcatgatgtatgtg 345  Q
    |||||| ||| ||||| |||||||| ||||  ||||||||||||||||| ||||| ||||||||||||    
T  26295369 atactccctctgtttcaaaatataaacaaattttactttttagattcatgcaattaatgatgtatgtg 26295436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 31759461 - 31759402
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||||||||||||||||| | ||||||||  |||| |||||| ||||||||||||    
T  31759461 tccgtttctaaatataagcaaaattgactttttaagttcattcaattaatgatgtatgtg 31759402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 33169327 - 33169260
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttacttttt-agattcatcaattcatgatgtatgtg 345  Q
    |||||| |||||||||||||||||||||||  ||||||||| || ||  |||||| ||||||||||||    
T  33169327 atactccctccgtttctaaatataagcaaattttactttttaagtttattcaattaatgatgtatgtg 33169260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 3343773 - 3343839
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||||| ||||||||||||||| | | ||||||| |||| |||||| ||||||||||||    
T  3343773 tactccctccgtttttaaatataagcaaaaatgattttttaggttcattcaattaatgatgtatgtg 3343839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 3418900 - 3418834
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||||| ||||||||||||||| | ||||||||| |||| |||||| || |||||||||    
T  3418900 tactcactccgtttttaaatataagcaaaattgactttttaggttcattcaattaataatgtatgtg 3418834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 19687611 - 19687545
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||||| |||||||| |||||  ||||||||||| |||| |||||| ||||||||||||    
T  19687611 tactccctccgtttttaaatatatgcaaattttactttttaggttcattcaattaatgatgtatgtg 19687545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 26597309 - 26597243
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| |||||||||||||| | ||||||||| |||| ||| || ||||||||||||    
T  26597309 tactccctccgtttcaaaatataagcaaaattcactttttaggttcattcatttaatgatgtatgtg 26597243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 29938346 - 29938412
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| || ||||| ||||||||||||||| | |||||||||||||| ||| || ||||||||||||    
T  29938346 tactcccttcgtttttaaatataagcaaaattgactttttagattcattcatttaatgatgtatgtg 29938412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 31577584 - 31577518
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt 344  Q
    ||||||| |||||||  |||||||||||||| ||| ||||||| |||| |||||| |||||||||||    
T  31577584 atactctatccgttttaaaatataagcaaaatttattttttaggttcattcaattaatgatgtatgt 31577518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 321
Target Start/End: Complemental strand, 32364161 - 32364119
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttag 321  Q
    |||||| |||||||| ||||||||||||||| |||||||||||    
T  32364161 atactccctccgtttttaaatataagcaaaatttactttttag 32364119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 345
Target Start/End: Original strand, 12290947 - 12291007
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||| |||||||||||||| | ||||||||| |||| ||| || ||||||||||||    
T  12290947 ctccgtttcaaaatataagcaaaattcactttttaggttcattcacttaatgatgtatgtg 12291007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 15998207 - 15998273
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| |||||||||||||| |||||||||||||||| ||| || ||||||||||||    
T  15998207 tactccctccgtttcaaaatataagcaaaatttactttttagattcattcatttaatgatgtatgtg 15998273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 16426904 - 16426970
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||||||||||||||||||||| | |||||||||||||| ||| || ||||||||||||    
T  16426904 tactccctccgtttctaaatataagcaaaattgactttttagattcattcatttaatgatgtatgtg 16426970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 37255270 - 37255204
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||||||||||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  37255270 tactccctccgtttctaaatataagcaaatattactttttaggttcattcaattaatgatgtatgtg 37255204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 7230005 - 7230070
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt 344  Q
    ||||| |||||||| ||||||||||||||| | |||||||||||||| |||||| |||||||||||    
T  7230005 tactccctccgtttttaaatataagcaaaattaactttttagattcattcaattaatgatgtatgt 7230070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 404
Target Start/End: Original strand, 6792426 - 6792482
Alignment:
Q  349 atcacatatatcattaattga-tgaacctacaaagtaaattttacttatatctaaag 404  Q
    ||||||||||||||||| ||| |||||||| |||||||||||||||||||| |||||    
T  6792426 atcacatatatcattaaatgaatgaacctaaaaagtaaattttacttatatttaaag 6792482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 345
Target Start/End: Original strand, 52253540 - 52253600
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||||||||||||||||||  |||||||||| ||||| |||||| ||||||||||||    
T  52253540 ctccgtttctaaatataagcaaattttactttttatattcattcaattaatgatgtatgtg 52253600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 6763479 - 6763412
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| ||||||||| |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  6763479 atactccctccgtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 6763412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 37255121 - 37255188
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||||| | ||||||||||||  |||||||||||||||| |||||| ||||||||||||    
T  37255121 atactccctccgttttttaatataagcaaattttactttttagattcattcaattaatgatgtatgtg 37255188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 435202 - 435268
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| |||||||||||||| | |||||||||||||| ||| || ||||||||||||    
T  435202 tactccctccgtttcaaaatataagcaaaattgactttttagattcattcatttaatgatgtatgtg 435268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 342
Target Start/End: Original strand, 4838304 - 4838370
Alignment:
Q  277 acatactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtat 342  Q
    |||||||| |||||||||||||||||| ||||  ||||||||||| |||| |||||| |||||||||    
T  4838304 acatactccctccgtttctaaatataaacaaattttactttttaggttcattcaattaatgatgtat 4838370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 5852684 - 5852750
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  5852684 tactccctccgtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 5852750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 38824435 - 38824369
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||||||||||||||| ||||  |||| ||||||||||| |||||| ||||||||||||    
T  38824435 tactccctccgtttctaaatataaacaaattttacgttttagattcattcaattaatgatgtatgtg 38824369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 38847446 - 38847380
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||||||||| ||||||||||||||| | ||||||||| |||| ||| || ||||||||||||    
T  38847446 tactctctccgtttttaaatataagcaaaattgactttttaggttcattcatttaatgatgtatgtg 38847380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 39181045 - 39181111
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||| || |||||||||||||  |||||||||||||||| |||||| ||||||||||||    
T  39181045 tactccctccgtctcaaaatataagcaaattttactttttagattcattcaattaatgatgtatgtg 39181111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 40329017 - 40328951
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt 344  Q
    |||||| |||||||| ||||||||| ||||  |||||||||||||||| |||||| |||||||||||    
T  40329017 atactccctccgtttttaaatataaacaaattttactttttagattcattcaattaatgatgtatgt 40328951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 46518089 - 46518023
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  46518089 tactccctccgtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 46518023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 47912568 - 47912634
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||||||||||||||||||||| | ||||||||| |||| ||| || ||||||||||||    
T  47912568 tactccctccgtttctaaatataagcaaaattgactttttaggttcattcatttaatgatgtatgtg 47912634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 21909985 - 21909920
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt 344  Q
    ||||| |||||||| ||||||||||||||  |||||||||||||| | |||||| |||||||||||    
T  21909985 tactccctccgtttttaaatataagcaaattttactttttagatttattcaattaatgatgtatgt 21909920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 34662398 - 34662467
Alignment:
Q  277 acatactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||| ||||||||| |||||||||||||| | ||||||||| |||| ||| || ||||||||||||    
T  34662398 acatactccctccgtttcaaaatataagcaaaattcactttttaggttcattcatttaatgatgtatgtg 34662467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 40094472 - 40094407
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattcatcaattc-atgatgtatgt 344  Q
    ||||| |||||||||||||||||||||||| | | |||||||||||||  |||| |||||||||||    
T  40094472 tactccctccgtttctaaatataagcaaaattcattttttagattcattcattcgatgatgtatgt 40094407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 45925391 - 45925322
Alignment:
Q  277 acatactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||| |||||| || |||||||||||||| ||||||||||| |||| ||| || ||||||||||||    
T  45925391 acatactccctccgtatcaaaatataagcaaaatttactttttaggttcattcatttaatgatgtatgtg 45925322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 29673799 - 29673847
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||| ||| |||||||||||||||||||| | |||||||||||||||    
T  29673799 atactccctctgtttctaaatataagcaaaattcactttttagattcat 29673847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 398
Target Start/End: Complemental strand, 42468990 - 42468869
Alignment:
Q  277 acatactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtgtttatcacatatatcattaattg-atgaac 374  Q
    ||||||||  |||||||  |||||||||||||| | ||||||||| |||| ||| || |||||||||||| |   |||||| |||||||| || ||||||    
T  42468990 acatactccttccgttttaaaatataagcaaaattcactttttaggttcattcatttaatgatgtatgtggt--ccacatacatcattaaatgaatgaac 42468893  T
Q  375 ctacaaagtaaattttacttatat 398  Q
    ||| ||||| |||||| |||||||    
T  42468892 ctaaaaagtgaattttgcttatat 42468869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 345
Target Start/End: Original strand, 3606268 - 3606323
Alignment:
Q  291 tttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||| ||||||||||| | |||||||||||||| |||||| ||||||||||||    
T  3606268 tttctaattataagcaaaattgactttttagattcattcaattaatgatgtatgtg 3606323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 4682932 - 4682999
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||| || |||||||||||||| | |||||||||||| | |||||| ||||||||||||    
T  4682932 atactccctccgtatcaaaatataagcaaaattaactttttagatttattcaattaatgatgtatgtg 4682999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 9135663 - 9135596
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||| || |||||||||||||| | |||||||||||||| ||| || ||||||||||||    
T  9135663 atactccctccgtatcaaaatataagcaaaattcactttttagattcattcatttaatgatgtatgtg 9135596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 26660639 - 26660706
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||| || |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  26660639 atactccctccgtctcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 26660706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 34061938 - 34062005
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||||| ||||||||| ||||  ||||||||||| |||| |||||| ||||||||||||    
T  34061938 atactccctccgtttttaaatataaacaaattttactttttaggttcattcaattaatgatgtatgtg 34062005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 39151850 - 39151803
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    ||||||||||||||| |||||||||||||| | ||||||||| |||||    
T  39151850 tactctctccgtttcaaaatataagcaaaattcactttttaggttcat 39151803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 39181196 - 39181129
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||| || |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  39181196 atactccctccgtatcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 39181129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 40907174 - 40907241
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||||||||||||||||||||| |||| | ||||||||  |||| | |||| ||||||||||||    
T  40907174 atactctctccgtttctaaatataagaaaaattgactttttacgttcatttaattaatgatgtatgtg 40907241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 45925247 - 45925306
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||| |||||||||||||| | |||||||||||||| ||| || ||||||||||||    
T  45925247 tccgtttcaaaatataagcaaaattcactttttagattcattcatttaatgatgtatgtg 45925306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 4838453 - 4838387
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||||||||||||||| ||||  |||||| |||| |||| |||||| ||||||||||||    
T  4838453 tactccctccgtttctaaatataaacaaattttacttcttaggttcattcaattaatgatgtatgtg 4838387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 4974189 - 4974123
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||||| | ||||||||||||| | |||||||||||||| ||| || ||||||||||||    
T  4974189 tactccctccgttttttaatataagcaaaattgactttttagattcattcatttaatgatgtatgtg 4974123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 12568580 - 12568515
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| |||||||||||||| ||||||||||| |||| ||| || ||||||||||||    
T  12568580 tactccctccgtttc-aaatataagcaaaatttactttttaggttcactcatttaatgatgtatgtg 12568515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 321
Target Start/End: Original strand, 24023360 - 24023402
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttag 321  Q
    |||||| |||||||||||||||||||||||| ||| |||||||    
T  24023360 atactccctccgtttctaaatataagcaaaatttattttttag 24023402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 26040527 - 26040477
Alignment:
Q  277 acatactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||||| ||||||||| |||||||||||||| | ||||||||| |||||    
T  26040527 acatactccctccgtttcaaaatataagcaaaattaactttttaggttcat 26040477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 27146168 - 27146102
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||||||| ||||||||||||||| | ||||||||| |||| ||| || ||||||||||||    
T  27146168 tactccctccgtttttaaatataagcaaaattgactttttaggttcattcatttaatgatgtatgtg 27146102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 31414900 - 31414834
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| |||||||||||||| | ||||||||| |||| ||| || ||||||||||||    
T  31414900 tactccctccgtttcaaaatataagcaaaattcactttttaggttcattcatttaatgatgtatgtg 31414834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 31919984 - 31919918
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| |||||||||||||| ||| ||||||| |||| ||| || ||||||||||||    
T  31919984 tactccctccgtttcaaaatataagcaaaatttattttttaggttcattcatttaatgatgtatgtg 31919918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 35838714 - 35838780
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| |||||||||||||| | | |||||||||||| ||| || ||||||||||||    
T  35838714 tactccctccgtttcaaaatataagcaaaattcattttttagattcattcatttaatgatgtatgtg 35838780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 39151720 - 39151786
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| |||||||||||||| | ||||||||| |||| ||| || ||||||||||||    
T  39151720 tactccctccgtttcaaaatataagcaaaattcactttttaggttcattcatttaatgatgtatgtg 39151786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 42468858 - 42468969
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtgtttatcacatatatcattaattg-atgaacctacaaagta 384  Q
    |||||||  |||||||||||||| | ||||||||| |||| ||| || ||||||||||||   | |||||| |||||||| || ||||||||| |||||     
T  42468858 tccgttttaaaatataagcaaaattcactttttaggttcattcatttaatgatgtatgtg--gaccacatacatcattaaatgaatgaacctaaaaagtg 42468955  T
Q  385 aattttacttatat 398  Q
    |||||| |||||||    
T  42468956 aattttgcttatat 42468969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 47011388 - 47011322
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| |||| ||| ||||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  47011388 tactccctccatttttaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 47011322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 48605218 - 48605148
Alignment:
Q  276 tacatactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||| ||||||| | |||||||||||||  | ||||||||| |||| |||||| ||||||||||||    
T  48605218 tacatactccctccgttccaaaatataagcaaatttgactttttaggttcattcaattaatgatgtatgtg 48605148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 49363528 - 49363462
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||  |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  49363528 tactccctccgttttaaaatataagcaaattttactttttaggttcattcaattgatgatgtatgtg 49363462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 6169806 - 6169871
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt 344  Q
    ||||||| |||||||||||||||||||| | ||| || ||||||||| | |||| |||||||||||    
T  6169806 tactctccccgtttctaaatataagcaacatttatttattagattcatttaattaatgatgtatgt 6169871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 327
Target Start/End: Original strand, 6792373 - 6792414
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||||| ||||||||||||||| | |||||||||||||||    
T  6792373 ctccgtttttaaatataagcaaaattgactttttagattcat 6792414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 403
Target Start/End: Complemental strand, 12062256 - 12062203
Alignment:
Q  351 cacatatatcattaattg-atgaacctacaaagtaaattttacttatatctaaa 403  Q
    |||||||||||||||||| ||||||||| ||||| |||||| ||||||| ||||    
T  12062256 cacatatatcattaattgaatgaacctaaaaagtcaattttccttatatttaaa 12062203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 403
Target Start/End: Complemental strand, 21852499 - 21852446
Alignment:
Q  351 cacatatatcattaattg-atgaacctacaaagtaaattttacttatatctaaa 403  Q
    |||||||||||||||||| ||||||||| ||||| |||||| ||||||| ||||    
T  21852499 cacatatatcattaattgaatgaacctaaaaagtcaattttgcttatatttaaa 21852446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 24478808 - 24478743
Alignment:
Q  281 actctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||||||| ||||||||||||||  ||||||||||  |||| | |||| ||||||||||||    
T  24478808 actctctccgtttttaaatataagcaaattttactttttaagttcatttaattaatgatgtatgtg 24478743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 31909754 - 31909811
Alignment:
Q  289 cgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  31909754 cgtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 31909811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 40341726 - 40341791
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgt 344  Q
    ||||| |||||||||||||||||| ||||  |||| |||||| |||| |||||| |||||||||||    
T  40341726 tactccctccgtttctaaatataaacaaattttacattttaggttcattcaattaatgatgtatgt 40341791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 321
Target Start/End: Original strand, 49980609 - 49980654
Alignment:
Q  276 tacatactctctccgtttctaaatataagcaaaacttactttttag 321  Q
    ||||||||| ||||||||| |||||||||||||| ||| |||||||    
T  49980609 tacatactccctccgtttcaaaatataagcaaaatttattttttag 49980654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 290 - 345
Target Start/End: Original strand, 1252137 - 1252193
Alignment:
Q  290 gtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||| ||||||||||| | ||||||||| |||| |||||| ||||||||||||    
T  1252137 gtttctaattataagcaaaattaactttttaggttcattcaattaatgatgtatgtg 1252193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 290 - 345
Target Start/End: Complemental strand, 2091880 - 2091824
Alignment:
Q  290 gtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||||||||||||||  ||||||||||| |||| |||||| || |||||||||    
T  2091880 gtttctaaatataagcaaattttactttttaggttcattcaattaatcatgtatgtg 2091824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 7151676 - 7151636
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    ||||||||||||||||||||||| | ||||||||| |||||    
T  7151676 tccgtttctaaatataagcaaaattcactttttaggttcat 7151636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 7213908 - 7213860
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||| ||| |||||||||||||||||||  ||||||||||| |||||    
T  7213908 atactccctctgtttctaaatataagcaaattttactttttaggttcat 7213860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 15998356 - 15998308
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||| ||||||||| |||||||||||||| | ||||||||| |||||    
T  15998356 atactccctccgtttcaaaatataagcaaaattcactttttaggttcat 15998308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 16427053 - 16427005
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||| |||||||| ||||||||||||||| | | |||||||||||||    
T  16427053 atactccctccgtttttaaatataagcaaaattgattttttagattcat 16427005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 24023510 - 24023462
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||| |||||||| ||||||||||||||| | ||||||||| |||||    
T  24023510 atactccctccgtttttaaatataagcaaaattaactttttaggttcat 24023462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 24286756 - 24286808
Alignment:
Q  275 atacatactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    ||||||||||  |||||||| |||||||||||||| | ||||||||| |||||    
T  24286756 atacatactccatccgtttcaaaatataagcaaaattcactttttaggttcat 24286808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 345
Target Start/End: Complemental strand, 27549191 - 27549123
Alignment:
Q  278 catactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||| ||| || || |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  27549191 catactccctctgtctcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 27549123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 345
Target Start/End: Complemental strand, 31482003 - 31481943
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||||||| |||||||||||||| | ||||||||| |||| ||| || ||||||||||||    
T  31482003 ctccgtttcaaaatataagcaaaattcactttttaggttcattcatttaatgatgtatgtg 31481943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 398
Target Start/End: Original strand, 34037998 - 34038046
Alignment:
Q  351 cacatatatcattaattga-tgaacctacaaagtaaattttacttatat 398  Q
    |||||| |||||||||||| |||||||| ||||| ||||||||||||||    
T  34037998 cacatacatcattaattgaatgaacctaaaaagtcaattttacttatat 34038046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 41621293 - 41621333
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||||| |||||||||||||| ||| |||||||||||||    
T  41621293 tccgtttcaaaatataagcaaaatttattttttagattcat 41621333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 48376949 - 48376902
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||||||| |||||||||||||||||||  | |||||||||||||||    
T  48376949 atactctctc-gtttctaaatataagcaaatttgactttttagattcat 48376902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 65915 - 65982
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| |||||| | ||||||||||||||| |||||||||||||||| ||| || ||||||||||||    
T  65915 atactccctccgtatttaaatataagcaaaatttactttttagattcattcatttaatgatgtatgtg 65982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 1777 - 1711
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||| |||||||||||||| ||||||||||| |||| ||| || ||||||||||||    
T  1777 tactccctccgtttcaaaatataagcaaaatttactttttaggttcattcatttaatgatgtatgtg 1711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 1628 - 1695
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||| ||||||||| |||||||||||||| ||| ||||||| |||| ||| || ||||||||||||    
T  1628 atactccctccgtttcaaaatataagcaaaatttattttttaggttcattcatttaatgatgtatgtg 1695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 17578 - 17512
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||||||||| ||||||||||||||| | ||||||||| |||| ||| || ||||||||||||    
T  17578 tactctctccgtttttaaatataagcaaaattgactttttaggttcattcatttaatgatgtatgtg 17512  T

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Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 323 - 257
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||||||||| |||| |||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  323 tactctctccatttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 257  T

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Target: scaffold0111 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 345
Target Start/End: Complemental strand, 38145 - 38085
Alignment:
Q  286 ctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    |||| ||||||||||||||||||  ||||||||||| |||| |||||| ||||||||||||    
T  38145 ctccatttctaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtg 38085  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 49658 - 49706
Alignment:
Q  279 atactctctccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    |||||| ||| |||||||||||||||||||| | |||||||||||||||    
T  49658 atactccctctgtttctaaatataagcaaaattgactttttagattcat 49706  T

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Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 8282 - 8322
Alignment:
Q  287 tccgtttctaaatataagcaaaacttactttttagattcat 327  Q
    ||||||| ||||||||||||||| | |||||||||||||||    
T  8282 tccgtttttaaatataagcaaaattgactttttagattcat 8322  T

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Target: scaffold0635 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 5532 - 5466
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttactttttagattca-tcaattcatgatgtatgtg 345  Q
    ||||| ||||||||||||||||||| |||  |||| ||||||||||| | |||| ||||||||||||    
T  5532 tactccctccgtttctaaatataagaaaattttacattttagattcatttaattaatgatgtatgtg 5466  T

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Target: scaffold0280 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 319
Target Start/End: Original strand, 13530 - 13572
Alignment:
Q  277 acatactctctccgtttctaaatataagcaaaacttacttttt 319  Q
    ||||||||||||||||| ||||||||||||||| | |||||||    
T  13530 acatactctctccgtttttaaatataagcaaaattgacttttt 13572  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 320
Target Start/End: Original strand, 45517 - 45557
Alignment:
Q  280 tactctctccgtttctaaatataagcaaaacttacttttta 320  Q
    ||||||||||||||||||||||||| |||  ||||||||||    
T  45517 tactctctccgtttctaaatataagtaaattttacttttta 45557  T

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