View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6006_low_27 (Length: 250)

Name: NF6006_low_27
Description: NF6006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6006_low_27
NF6006_low_27
[»] scaffold0185 (1 HSPs)
scaffold0185 (16-241)||(3773-3999)
[»] scaffold0809 (2 HSPs)
scaffold0809 (6-154)||(1402-1550)
scaffold0809 (30-143)||(1672-1782)
[»] chr5 (38 HSPs)
chr5 (16-143)||(23979149-23979277)
chr5 (8-143)||(14143904-14144039)
chr5 (16-143)||(6817125-6817252)
chr5 (16-148)||(24074300-24074433)
chr5 (16-140)||(7125923-7126047)
chr5 (31-143)||(17762285-17762397)
chr5 (17-132)||(22571090-22571206)
chr5 (16-149)||(14411693-14411827)
chr5 (17-149)||(14144150-14144283)
chr5 (16-80)||(20709278-20709342)
chr5 (22-143)||(24837171-24837293)
chr5 (25-143)||(41001610-41001728)
chr5 (22-143)||(30512290-30512411)
chr5 (22-143)||(30552630-30552751)
chr5 (22-143)||(4918991-4919114)
chr5 (25-143)||(24837426-24837545)
chr5 (16-149)||(7126165-7126299)
chr5 (6-140)||(27158996-27159130)
chr5 (22-143)||(31799642-31799764)
chr5 (22-150)||(17762536-17762665)
chr5 (19-143)||(18336707-18336831)
chr5 (22-150)||(14411920-14412048)
chr5 (19-127)||(41001374-41001480)
chr5 (17-143)||(993995-994121)
chr5 (16-141)||(29444810-29444936)
chr5 (25-143)||(18336469-18336589)
chr5 (16-143)||(24650704-24650830)
chr5 (14-80)||(29445052-29445118)
chr5 (22-143)||(993752-993871)
chr5 (16-80)||(24074550-24074614)
chr5 (32-140)||(27159221-27159327)
chr5 (25-79)||(6817378-6817432)
chr5 (93-143)||(24651025-24651075)
chr5 (16-78)||(41424584-41424646)
chr5 (27-64)||(4919145-4919182)
chr5 (27-64)||(7126072-7126109)
chr5 (27-63)||(14144088-14144124)
chr5 (93-141)||(31799965-31800013)
[»] chr2 (40 HSPs)
chr2 (16-143)||(23806200-23806328)
chr2 (16-143)||(17850589-17850716)
chr2 (25-140)||(19251476-19251591)
chr2 (16-156)||(15106315-15106454)
chr2 (16-151)||(19251718-19251853)
chr2 (22-143)||(26236349-26236470)
chr2 (16-143)||(42670967-42671095)
chr2 (16-151)||(26560550-26560684)
chr2 (16-143)||(17850834-17850962)
chr2 (8-150)||(20498742-20498883)
chr2 (19-143)||(17463342-17463467)
chr2 (37-140)||(23854693-23854797)
chr2 (25-134)||(26135828-26135938)
chr2 (8-161)||(34548558-34548711)
chr2 (8-143)||(22263431-22263569)
chr2 (16-143)||(39878105-39878232)
chr2 (16-143)||(15106069-15106197)
chr2 (16-80)||(22263257-22263321)
chr2 (22-141)||(30390463-30390583)
chr2 (16-79)||(23854914-23854977)
chr2 (92-143)||(26560880-26560931)
chr2 (89-140)||(30958689-30958740)
chr2 (22-64)||(13254690-13254732)
chr2 (22-80)||(20498999-20499057)
chr2 (16-148)||(26236124-26236257)
chr2 (89-133)||(13284735-13284779)
chr2 (22-69)||(13284485-13284532)
chr2 (89-140)||(42670722-42670773)
chr2 (25-150)||(13254492-13254618)
chr2 (25-143)||(17463094-17463212)
chr2 (93-143)||(26136143-26136193)
chr2 (17-63)||(33290298-33290344)
chr2 (91-140)||(12419046-12419095)
chr2 (91-140)||(12431106-12431155)
chr2 (89-142)||(13254758-13254811)
chr2 (27-64)||(22263346-22263383)
chr2 (27-64)||(23854821-23854858)
chr2 (106-143)||(23855033-23855070)
chr2 (16-77)||(42670788-42670849)
chr2 (42-79)||(44098896-44098933)
[»] chr8 (31 HSPs)
chr8 (16-137)||(42112993-42113114)
chr8 (22-143)||(43851667-43851788)
chr8 (22-134)||(30789519-30789631)
chr8 (25-143)||(14820297-14820415)
chr8 (16-140)||(10108618-10108743)
chr8 (16-143)||(10108372-10108500)
chr8 (16-140)||(21147941-21148067)
chr8 (16-137)||(5555117-5555239)
chr8 (16-140)||(14820542-14820667)
chr8 (16-143)||(7689771-7689899)
chr8 (16-143)||(30789755-30789883)
chr8 (16-143)||(17622892-17623017)
chr8 (32-150)||(5554864-5554983)
chr8 (16-143)||(42113232-42113357)
chr8 (16-149)||(10171391-10171525)
chr8 (16-142)||(17623135-17623261)
chr8 (25-149)||(7689520-7689644)
chr8 (89-143)||(14767826-14767880)
chr8 (93-151)||(20875692-20875750)
chr8 (22-80)||(22494638-22494696)
chr8 (22-143)||(26136939-26137060)
chr8 (16-80)||(26532849-26532913)
chr8 (93-143)||(18044153-18044203)
chr8 (34-143)||(42606019-42606129)
chr8 (95-143)||(2583322-2583370)
chr8 (16-80)||(14767573-14767637)
chr8 (16-143)||(21148184-21148312)
chr8 (89-149)||(35367406-35367466)
chr8 (35-143)||(43481581-43481691)
chr8 (27-64)||(10108556-10108593)
chr8 (91-140)||(20877069-20877118)
[»] chr6 (27 HSPs)
chr6 (22-143)||(18500317-18500438)
chr6 (16-143)||(32017752-32017879)
chr6 (16-143)||(9481184-9481312)
chr6 (22-143)||(24732192-24732313)
chr6 (89-142)||(26385596-26385649)
chr6 (16-79)||(9854135-9854198)
chr6 (16-79)||(14680949-14681012)
chr6 (17-80)||(19284195-19284258)
chr6 (25-79)||(17142744-17142798)
chr6 (93-143)||(18500655-18500705)
chr6 (89-143)||(24731937-24731991)
chr6 (22-143)||(26385280-26385402)
chr6 (16-142)||(30458903-30459031)
chr6 (16-141)||(10321737-10321860)
chr6 (22-80)||(33714553-33714611)
chr6 (16-80)||(9481430-9481494)
chr6 (6-77)||(24732007-24732078)
chr6 (89-151)||(2299635-2299697)
chr6 (44-140)||(9154884-9154982)
chr6 (93-143)||(30617969-30618019)
chr6 (89-135)||(32017550-32017596)
chr6 (110-143)||(3229962-3229995)
chr6 (42-79)||(15942410-15942447)
chr6 (27-64)||(30618147-30618184)
chr6 (27-64)||(32017691-32017728)
chr6 (27-68)||(33714642-33714683)
chr6 (31-79)||(30618029-30618077)
[»] scaffold0361 (2 HSPs)
scaffold0361 (22-150)||(4817-4945)
scaffold0361 (89-143)||(4564-4618)
[»] chr7 (38 HSPs)
chr7 (22-148)||(23704915-23705041)
chr7 (22-151)||(12006535-12006664)
chr7 (16-143)||(41600206-41600334)
chr7 (16-143)||(28218180-28218309)
chr7 (22-143)||(10409628-10409749)
chr7 (22-143)||(25772366-25772487)
chr7 (16-143)||(16995202-16995329)
chr7 (25-143)||(28218420-28218539)
chr7 (16-148)||(12006788-12006921)
chr7 (22-151)||(20458686-20458815)
chr7 (22-143)||(38879725-38879848)
chr7 (8-143)||(23704664-23704799)
chr7 (17-143)||(38879973-38880097)
chr7 (8-143)||(48648264-48648399)
chr7 (25-143)||(48672536-48672655)
chr7 (22-143)||(20419538-20419660)
chr7 (25-143)||(20419793-20419913)
chr7 (34-143)||(20963760-20963869)
chr7 (16-148)||(48672274-48672409)
chr7 (16-143)||(6465857-6465984)
chr7 (16-142)||(7657972-7658101)
chr7 (25-143)||(23383757-23383876)
chr7 (25-144)||(48648486-48648604)
chr7 (22-143)||(44816833-44816959)
chr7 (89-143)||(7658287-7658341)
chr7 (93-143)||(24195198-24195248)
chr7 (16-143)||(33162783-33162912)
chr7 (22-143)||(41599960-41600082)
chr7 (31-80)||(20458954-20459003)
chr7 (16-80)||(1250454-1250518)
chr7 (28-80)||(24195056-24195108)
chr7 (25-148)||(25772588-25772712)
chr7 (16-143)||(31851243-31851369)
chr7 (89-143)||(6466127-6466181)
chr7 (94-140)||(31852157-31852203)
chr7 (28-80)||(20963561-20963613)
chr7 (27-63)||(20963650-20963686)
chr7 (25-77)||(31851496-31851548)
[»] chr3 (50 HSPs)
chr3 (19-156)||(16722242-16722380)
chr3 (16-140)||(14162119-14162243)
chr3 (16-143)||(4204711-4204838)
chr3 (16-150)||(43572639-43572773)
chr3 (16-143)||(5800607-5800735)
chr3 (28-143)||(9266977-9267093)
chr3 (16-143)||(14171589-14171716)
chr3 (6-143)||(30500279-30500416)
chr3 (16-151)||(14171834-14171970)
chr3 (16-140)||(30500048-30500171)
chr3 (16-154)||(52552681-52552822)
chr3 (25-151)||(9267232-9267358)
chr3 (8-143)||(20853697-20853834)
chr3 (22-151)||(35995672-35995802)
chr3 (22-150)||(21633150-21633279)
chr3 (25-149)||(43572385-43572510)
chr3 (16-143)||(14262284-14262412)
chr3 (8-159)||(20853936-20854086)
chr3 (16-143)||(33372653-33372780)
chr3 (22-143)||(49986782-49986904)
chr3 (22-148)||(45003750-45003876)
chr3 (16-80)||(14161937-14162001)
chr3 (22-143)||(19112766-19112889)
chr3 (16-151)||(33372400-33372536)
chr3 (22-143)||(45970169-45970292)
chr3 (16-80)||(52552936-52553000)
chr3 (89-140)||(27946114-27946165)
chr3 (32-143)||(35995942-35996051)
chr3 (25-143)||(45969917-45970036)
chr3 (89-143)||(15328465-15328519)
chr3 (32-143)||(16721993-16722105)
chr3 (22-140)||(5800859-5800977)
chr3 (25-143)||(11003734-11003853)
chr3 (22-140)||(14262041-14262160)
chr3 (25-143)||(19113022-19113141)
chr3 (30-133)||(36990922-36991025)
chr3 (30-133)||(37016362-37016465)
chr3 (25-143)||(45003498-45003617)
chr3 (25-149)||(49986523-49986649)
chr3 (89-143)||(19720335-19720389)
chr3 (89-143)||(27946187-27946241)
chr3 (89-150)||(17465362-17465423)
chr3 (19-80)||(45058742-45058803)
chr3 (16-80)||(15328708-15328772)
chr3 (30-133)||(35740829-35740931)
chr3 (105-143)||(21632903-21632941)
chr3 (16-78)||(32998382-32998444)
chr3 (27-64)||(14262191-14262228)
chr3 (92-140)||(3425973-3426021)
chr3 (27-63)||(38283737-38283773)
[»] scaffold0048 (1 HSPs)
scaffold0048 (146-241)||(62344-62440)
[»] chr4 (52 HSPs)
chr4 (22-143)||(31090062-31090185)
chr4 (8-143)||(3273860-3273994)
chr4 (16-143)||(38573971-38574098)
chr4 (28-150)||(9396959-9397081)
chr4 (8-145)||(48259991-48260128)
chr4 (16-142)||(9396702-9396829)
chr4 (32-143)||(13132205-13132315)
chr4 (16-142)||(35376376-35376502)
chr4 (25-148)||(9618977-9619101)
chr4 (16-143)||(35376165-35376292)
chr4 (22-143)||(9619233-9619355)
chr4 (6-143)||(31090299-31090437)
chr4 (22-143)||(34063984-34064106)
chr4 (16-142)||(3018014-3018142)
chr4 (8-140)||(3018252-3018383)
chr4 (16-140)||(4356129-4356253)
chr4 (25-137)||(15640724-15640836)
chr4 (16-80)||(15640963-15641027)
chr4 (25-143)||(9516867-9516986)
chr4 (8-143)||(46046432-46046562)
chr4 (22-143)||(9516612-9516734)
chr4 (25-142)||(38574225-38574343)
chr4 (16-142)||(13131943-13132071)
chr4 (16-143)||(46046672-46046799)
chr4 (8-148)||(3273618-3273760)
chr4 (25-140)||(4355887-4356002)
chr4 (6-140)||(18713198-18713335)
chr4 (16-143)||(37012955-37013082)
chr4 (89-143)||(31218303-31218357)
chr4 (22-143)||(12904749-12904870)
chr4 (28-143)||(26252497-26252613)
chr4 (32-80)||(34064246-34064294)
chr4 (16-80)||(37012773-37012837)
chr4 (25-149)||(31943946-31944071)
chr4 (89-140)||(36887685-36887736)
chr4 (6-140)||(48579871-48580006)
chr4 (93-143)||(41947180-41947230)
chr4 (89-127)||(43312227-43312265)
chr4 (90-143)||(41946967-41947020)
chr4 (8-80)||(7819080-7819152)
chr4 (16-76)||(7819262-7819322)
chr4 (25-77)||(26252337-26252389)
chr4 (16-140)||(36888928-36889051)
chr4 (17-143)||(31944199-31944326)
chr4 (25-80)||(48580123-48580178)
chr4 (98-140)||(46935170-46935212)
chr4 (89-143)||(48259825-48259879)
chr4 (89-135)||(51029095-51029141)
chr4 (27-68)||(38574123-38574164)
chr4 (27-63)||(4356068-4356104)
chr4 (16-80)||(18713026-18713090)
chr4 (27-63)||(37012862-37012898)
[»] chr1 (40 HSPs)
chr1 (16-140)||(20995916-20996040)
chr1 (8-143)||(18462288-18462423)
chr1 (8-143)||(24467631-24467766)
chr1 (16-143)||(52058256-52058384)
chr1 (22-143)||(39826052-39826174)
chr1 (8-80)||(24467867-24467939)
chr1 (17-76)||(7473862-7473921)
chr1 (16-142)||(17606307-17606438)
chr1 (16-140)||(17606556-17606679)
chr1 (25-143)||(29696567-29696685)
chr1 (22-143)||(30299485-30299607)
chr1 (22-143)||(39711326-39711448)
chr1 (34-143)||(39826312-39826422)
chr1 (22-143)||(34749140-34749261)
chr1 (16-143)||(4906964-4907092)
chr1 (16-80)||(8293055-8293119)
chr1 (25-143)||(30299234-30299352)
chr1 (22-133)||(42510027-42510138)
chr1 (16-143)||(39970647-39970776)
chr1 (22-80)||(52058077-52058135)
chr1 (6-122)||(16294185-16294302)
chr1 (17-141)||(18462533-18462658)
chr1 (8-80)||(4907202-4907274)
chr1 (22-149)||(33628686-33628814)
chr1 (31-143)||(39711076-39711187)
chr1 (16-151)||(48072209-48072345)
chr1 (89-140)||(33629012-33629063)
chr1 (89-143)||(18342339-18342393)
chr1 (31-143)||(34749368-34749481)
chr1 (16-147)||(43539345-43539477)
chr1 (89-143)||(39970968-39971022)
chr1 (22-143)||(29696812-29696933)
chr1 (16-143)||(8292806-8292934)
chr1 (89-140)||(43539669-43539720)
chr1 (95-149)||(16294045-16294099)
chr1 (89-143)||(20995700-20995754)
chr1 (94-143)||(13230059-13230108)
chr1 (27-64)||(17606494-17606531)
chr1 (6-74)||(33628928-33628996)
chr1 (24-64)||(42510166-42510206)
[»] scaffold0141 (2 HSPs)
scaffold0141 (92-151)||(8319-8378)
scaffold0141 (16-80)||(8570-8634)
[»] scaffold0477 (2 HSPs)
scaffold0477 (93-150)||(4875-4932)
scaffold0477 (22-79)||(5002-5059)
[»] scaffold0117 (1 HSPs)
scaffold0117 (16-140)||(12230-12355)
[»] scaffold0352 (2 HSPs)
scaffold0352 (89-143)||(6001-6055)
scaffold0352 (91-148)||(4664-4721)
[»] scaffold0449 (2 HSPs)
scaffold0449 (35-143)||(7466-7576)
scaffold0449 (22-80)||(7292-7350)
[»] scaffold0176 (1 HSPs)
scaffold0176 (89-149)||(15950-16010)


Alignment Details
Target: scaffold0185 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 16 - 241
Target Start/End: Complemental strand, 3999 - 3773
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgcta 114  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||         ||||||||||||| || |||| ||||    
T  3999 ctgacatggtgaaatgagcgaccaacagtggaagaatttgaaattacagggacataatctaaatctttttttttacagggactaaaaccggaattcgcta 3900  T
Q  115 atattacagggacaaaaagaggtatttactctaaaaacaaatataataatttttgaagttttcatccatttattacacgttttaaataacagtacctaaa 214  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||    
T  3899 atattacagggacgaaaagagatatttaccctaaaaacaaatataataatttttgaagttttcatccatttattacacgttttaaataacggtatgtaaa 3800  T
Q  215 aattacttcaaatgattttctataact 241  Q
    || ||||||||||||||||||||||||    
T  3799 aactacttcaaatgattttctataact 3773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 154
Target Start/End: Complemental strand, 1550 - 1402
Alignment:
Q  6 gtagattatactgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcga 105  Q
    ||||||| | ||||| || ||||| |||||||||| ||||||||||| ||||||||||| |||||||||||||||        |||||||||||||||||    
T  1550 gtagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacataatctaaatcttttttttacagggactaaaatcga 1451  T
Q  106 aatttgctaatattacagggacaaaaagaggtatttactctaaaaacaa 154  Q
    |||| || |||||||| ||| | ||||||||||||||| || |||||||    
T  1450 aattcgcaaatattaccgggtcgaaaagaggtatttacccttaaaacaa 1402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 143
Target Start/End: Original strand, 1672 - 1782
Alignment:
Q  30 tgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattacagggacaa 129  Q
    ||||||||||| ||||||||||| ||||||||||  |||||||||||| |         | ||||||||||| || |||| | ||||||||||||||| |    
T  1672 tgagggaccaaaagtggaagaatctgaaattacaaggacataatctaatt---ttttttatagggactaaaaccggaattcgttaatattacagggacga 1768  T
Q  130 aaagaggtatttac 143  Q
    ||||||| ||||||    
T  1769 aaagagggatttac 1782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 23979149 - 23979277
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc-nnnnnnnnacagggactaaaatcgaaatttgcta 114  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||         ||||||||||||| || |||| ||||    
T  23979149 ctgacgtggtgaaatgagggaccaaaagtggaagaatttgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgcta 23979248  T
Q  115 atattacagggacaaaaagaggtatttac 143  Q
    ||||||||||||| |||||||||||||||    
T  23979249 atattacagggacgaaaagaggtatttac 23979277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 8 - 143
Target Start/End: Complemental strand, 14144039 - 14143904
Alignment:
Q  8 agattatactgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaa 107  Q
    ||||| ||||||| || |||||||||| ||||| ||||||||||| ||||||||||| |||| ||||||||||        ||||||||||||| || ||    
T  14144039 agattctactgacgtgatgaaatgaggtaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacagggactaaaaccggaa 14143940  T
Q  108 tttgctaatattacagggacaaaaagaggtatttac 143  Q
    || ||||||||||||||||| |||||||||||||||    
T  14143939 ttcgctaatattacagggacgaaaagaggtatttac 14143904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 6817252 - 6817125
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||||||||  |||||||||||||||        ||||||||||||| || ||||  ||||    
T  6817252 ctgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacatggacataatctaaatcttttttttacagggactaaaaccggaattcactaa 6817153  T
Q  116 tattacagggacaaaaagaggtatttac 143  Q
    ||||||| |||| |||||||||||||||    
T  6817152 tattacaaggacgaaaagaggtatttac 6817125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 24074433 - 24074300
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgcta 114  Q
    ||||| || ||||| |||||||||| ||||||||||| |||||||||||||||| |||||||||          ||||||||||||| ||||||| ||||    
T  24074433 ctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagagacaaaatctaaatatttttttttacagggactaaaaccgaaattcgcta 24074334  T
Q  115 atattacagggacaaaaagaggtatttactctaa 148  Q
    |||||||| |||| ||||||||||||||| ||||    
T  24074333 atattacatggacgaaaagaggtatttaccctaa 24074300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 7126047 - 7125923
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    ||||| ||||| ||| ||||||||| ||||||||||| |||||||| || |||| ||||||||||        |||||||||||||||| |||| |||||    
T  7126047 ctgacgtggtggaataagggaccaaaagtggaagaatctgaaattatagggacaaaatctaaatcttttttttacagggactaaaatcggaattcgctaa 7125948  T
Q  116 tattacagggacaaaaagaggtatt 140  Q
    ||||||||| || ||||||||||||    
T  7125947 tattacaggaacgaaaagaggtatt 7125923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 17762397 - 17762285
Alignment:
Q  31 gagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattacagggacaaa 130  Q
    |||||||||| ||||||||||| |||||||||||  ||| ||| ||||||        ||||||||||||| || |||| ||||||||||||||||||||    
T  17762397 gagggaccaaaagtggaagaatctgaaattacaggaacaaaatataaatcttttttttacagggactaaaaccggaattcgctaatattacagggacaaa 17762298  T
Q  131 aagaggtatttac 143  Q
    |||||||||||||    
T  17762297 aagaggtatttac 17762285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 22571206 - 22571090
Alignment:
Q  17 tgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaa-tcnnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    |||| ||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||| |         |||||||||||||||| |||| |||||    
T  22571206 tgacgtggtgaaatgagggaccaaaagtggaagaatatgaaattacagagatataatctaaatttttttttttacagggactaaaatcggaattcgctaa 22571107  T
Q  116 tattacagggacaaaaa 132  Q
    ||||||| |||||||||    
T  22571106 tattacaaggacaaaaa 22571090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 14411827 - 14411693
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgcta 114  Q
    ||||| || ||||| |||||||||| ||||||||||| |||||||||| ||||| ||| ||||||         ||||||||||||| || |||| ||||    
T  14411827 ctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacatagacaaaatataaatctttttttatacagggactaaaaccggaattcgcta 14411728  T
Q  115 atattacagggacaaaaagaggtatttactctaaa 149  Q
    ||||||||||||| ||||||||||||||| |||||    
T  14411727 atattacagggacgaaaagaggtatttaccctaaa 14411693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 149
Target Start/End: Original strand, 14144150 - 14144283
Alignment:
Q  17 tgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc-nnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    |||| ||||| ||| ||||||||| ||||||||||||||||||||||| |||| ||||||||||         |||||||||||||||| |||| | |||    
T  14144150 tgacgtggtggaataagggaccaaaagtggaagaatttgaaattacagggacaaaatctaaatctttttttttacagggactaaaatcggaattcgttaa 14144249  T
Q  116 tattacagggacaaaaagaggtatttactctaaa 149  Q
    |||||||| ||| |||||||||||| || |||||    
T  14144250 tattacagtgacgaaaagaggtattaaccctaaa 14144283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 20709342 - 20709278
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc 80  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||    
T  20709342 ctgacgtggtgaaatgagggaccaaaagtggaagaatttgaaattacagggacagaatctaaatc 20709278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 143
Target Start/End: Complemental strand, 24837293 - 24837171
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgctaatatta 120  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||  |||| ||||||||||         ||||||||||||| || |||| |||| |||||    
T  24837293 tggtggaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctattatta 24837194  T
Q  121 cagggacaaaaagaggtatttac 143  Q
    ||||||| |||||||||||||||    
T  24837193 cagggacgaaaagaggtatttac 24837171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 41001610 - 41001728
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattacagg 124  Q
    ||||| |||||||||| ||||||||||| |||||||| || |||| ||||||||||        ||| ||||||||| || |||| ||||||||||||||    
T  41001610 tgaaaggagggaccaaaagtggaagaatctgaaattatagggacaaaatctaaatcttttttttacaaggactaaaaccggaattcgctaatattacagg 41001709  T
Q  125 gacaaaaagaggtatttac 143  Q
    ||| |||| ||||||||||    
T  41001710 gacgaaaaaaggtatttac 41001728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 143
Target Start/End: Complemental strand, 30512411 - 30512290
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattac 121  Q
    ||||| ||||||||||||| ||||||| ||| ||||||||||| |||  ||||||||||        ||||||||||||| | |||||  ||||||||||    
T  30512411 tggtggaatgagggaccaaaagtggaaaaatctgaaattacagggaccaaatctaaatcctttttttacagggactaaaaccaaaattcactaatattac 30512312  T
Q  122 agggacaaaaagaggtatttac 143  Q
    |||||| ||||||| |||||||    
T  30512311 agggacgaaaagagatatttac 30512290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 143
Target Start/End: Complemental strand, 30552751 - 30552630
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattac 121  Q
    ||||| ||||||||||||| ||||||| ||| ||||||||||| |||  ||||||||||        ||||||||||||| | |||||  ||||||||||    
T  30552751 tggtggaatgagggaccaaaagtggaaaaatctgaaattacagggaccaaatctaaatcctttttttacagggactaaaaccaaaattcactaatattac 30552652  T
Q  122 agggacaaaaagaggtatttac 143  Q
    |||||| ||||||| |||||||    
T  30552651 agggacgaaaagagatatttac 30552630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 143
Target Start/End: Complemental strand, 4919114 - 4918991
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc--nnnnnnnnacagggactaaaatcgaaatttgctaatatt 119  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||| |||| ||||||||||          ||||| ||||||| ||||||| |||||||||    
T  4919114 tggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacaggaactaaaaccgaaattcgctaatatt 4919015  T
Q  120 acagggacaaaaagaggtatttac 143  Q
    |||| ||  |||||||||||||||    
T  4919014 acagagatgaaaagaggtatttac 4918991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 24837426 - 24837545
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgctaatattacag 123  Q
    ||||| |||||| ||| ||| ||||||||||||||||||| |||| ||||||||||         |||||||||||||  | |||| |||||||||||||    
T  24837426 tgaaaggagggagcaaaagtagaagaatttgaaattacagggacaaaatctaaatctttttttttacagggactaaaactggaattcgctaatattacag 24837525  T
Q  124 ggacaaaaagaggtatttac 143  Q
    |||| |||||||||||||||    
T  24837526 ggacgaaaagaggtatttac 24837545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 7126165 - 7126299
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc-nnnnnnnnacagggactaaaatcgaaatttgcta 114  Q
    ||||| || ||||| |||||||||| ||||||||||| ||||||||||| |||| ||||||||||         |||  |||||||| || |||| ||||    
T  7126165 ctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacaaagactaaaaccggaattcgcta 7126264  T
Q  115 atattacagggacaaaaagaggtatttactctaaa 149  Q
    ||||||||||||  ||||||||||||||| |||||    
T  7126265 atattacagggatgaaaagaggtatttaccctaaa 7126299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 27159130 - 27158996
Alignment:
Q  6 gtagattatactgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcga 105  Q
    ||||||| | ||||| ||||| ||| ||||||||| ||||||||||| ||||||||||| |||| ||| ||||||        || | ||||||||  ||    
T  27159130 gtagattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggacaaaatttaaatctttttttaactgagactaaaactga 27159031  T
Q  106 aatttgctaatattacagggacaaaaagaggtatt 140  Q
    |||| |||||||||||| |||| ||||||||||||    
T  27159030 aattcgctaatattacatggacgaaaagaggtatt 27158996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 143
Target Start/End: Complemental strand, 31799764 - 31799642
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc-nnnnnnnnacagggactaaaatcgaaatttgctaatatta 120  Q
    ||||| ||| ||||||||| ||||||||||| ||||||||||| |||| ||||||||||         ||||||||| ||| || |||| ||||||||||    
T  31799764 tggtggaataagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactgaaaccggaattcgctaatatta 31799665  T
Q  121 cagggacaaaaagaggtatttac 143  Q
     |||||| |||||||||||||||    
T  31799664 tagggacgaaaagaggtatttac 31799642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 150
Target Start/End: Original strand, 17762536 - 17762665
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgctaatatta 120  Q
    ||||| ||||||||||||| ||||||||||| ||||||||  | |||| ||||||||||         ||||||||||||| |  |||| ||||||| ||    
T  17762536 tggtggaatgagggaccaaaagtggaagaatctgaaattatggggacaaaatctaaatctttttttttacagggactaaaaccagaattcgctaatacta 17762635  T
Q  121 cagggacaaaaagaggtatttactctaaaa 150  Q
    ||||||| ||||||||||||||| ||||||    
T  17762636 cagggacgaaaagaggtatttaccctaaaa 17762665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 18336707 - 18336831
Alignment:
Q  19 acatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc-nnnnnnnnacagggactaaaatcgaaatttgctaata 117  Q
    |||||||| ||| ||||| ||| ||||||||||| ||||||||||| |||| ||||||||||         ||||||||||||| || |||| ||||||     
T  18336707 acatggtgtaataagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaat- 18336805  T
Q  118 ttacagggacaaaaagaggtatttac 143  Q
    |||||||||| |||||||||||||||    
T  18336806 ttacagggacgaaaagaggtatttac 18336831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 150
Target Start/End: Original strand, 14411920 - 14412048
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattac 121  Q
    ||||| |||||||||||||  |||||||||| ||||||||||  |||| |||||||||         ||||||||||||| ||||||| | ||||||||     
T  14411920 tggtggaatgagggaccaaacgtggaagaatctgaaattacaaggacaaaatctaaattttttttttacagggactaaaaccgaaattcgttaatattat 14412019  T
Q  122 agggacaaaaagaggtatttactctaaaa 150  Q
    || ||  ||||||||||||||| ||||||    
T  14412020 agagatgaaaagaggtatttaccctaaaa 14412048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 41001480 - 41001374
Alignment:
Q  19 acatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatat 118  Q
    |||||||| ||||| ||||||| ||||||||||| ||||||||||| |||| ||||||| |         ||||||||||||| ||||||| ||||||||    
T  41001480 acatggtggaatgaaggaccaaaagtggaagaatatgaaattacagggacaaaatctaatt--tttttttacagggactaaaaccgaaattcgctaatat 41001383  T
Q  119 tacagggac 127  Q
    |||||||||    
T  41001382 tacagggac 41001374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 143
Target Start/End: Original strand, 993995 - 994121
Alignment:
Q  17 tgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc-nnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    ||||||| | ||| |||||||||| ||||||||||| || |||||||| |||| ||||||||||         ||||||||||||| ||||||| ||||     
T  993995 tgacatgataaaaggagggaccaaaagtggaagaatctgcaattacagggacaaaatctaaatcttttattctacagggactaaaaccgaaattcgctat 994094  T
Q  116 tattacagggacaaaaagaggtatttac 143  Q
    |||||| |||||||||| ||||||||||    
T  994095 tattacggggacaaaaa-aggtatttac 994121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 29444936 - 29444810
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaat-cnnnnnnnnacagggactaaaatcgaaatttgcta 114  Q
    ||||| || ||||| |||||||||| ||| ||||||| ||||||||||  |||||||||||||| |        |||||||||||||||  |||| | ||    
T  29444936 ctgacgtgatgaaaggagggaccaaaagtagaagaatatgaaattacaaggacataatctaaatccttttttttacagggactaaaatcagaattcgtta 29444837  T
Q  115 atattacagggacaaaaagaggtattt 141  Q
    ||||||||||||| ||||||| |||||    
T  29444836 atattacagggacgaaaagagatattt 29444810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 18336589 - 18336469
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn--acagggactaaaatcgaaatttgctaatattaca 122  Q
    ||||| |||||| ||| || |||||||| ||||||||||| |||| ||||||||||          |||||||||||||||| |||| |||||||||| |    
T  18336589 tgaaaggagggatcaaaagcggaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaaatcggaattcgctaatattata 18336490  T
Q  123 gggacaaaaagaggtatttac 143  Q
    ||||| ||||||| |||||||    
T  18336489 gggacgaaaagagatatttac 18336469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 24650830 - 24650704
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    ||||| ||||| ||||||  ||||| ||||||||||| |||||||||||  ||| ||||||||||        |||  || ||||| ||||||| | |||    
T  24650830 ctgacgtggtggaatgagctaccaaaagtggaagaatatgaaattacaggaacaaaatctaaatcttttttt-acatagattaaaaccgaaattcgttaa 24650732  T
Q  116 tattacagggacaaaaagaggtatttac 143  Q
    |||||||||||| |||||||||||||||    
T  24650731 tattacagggacgaaaagaggtatttac 24650704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 29445052 - 29445118
Alignment:
Q  14 tactgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc 80  Q
    ||||||| ||||| ||| ||||||||| ||||||||||| ||||||||||  |||| ||||||||||    
T  29445052 tactgacgtggtggaataagggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatc 29445118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 143
Target Start/End: Complemental strand, 993871 - 993752
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattac 121  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||  |||  ||||||| |         ||||||||||||| || |||| |||||||||||    
T  993871 tggtggaatgagggaccaaaagtggaagaatatgaaattacaaggactaaatctaatt--tttttttacagggactaaaaccggaattcgctaatattac 993774  T
Q  122 agggacaaaaagaggtatttac 143  Q
    || ||| |||||| ||||||||    
T  993773 agagacgaaaagaagtatttac 993752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 24074550 - 24074614
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc 80  Q
    ||||| |||| |||| ||||||||| ||||||||||| ||||||||||  |||| ||||||||||    
T  24074550 ctgacgtggttaaataagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatc 24074614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 140
Target Start/End: Original strand, 27159221 - 27159327
Alignment:
Q  32 agggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattacagggacaaaa 131  Q
    ||||||||| | ||||||||| | ||||||||| |||| |||||||||         ||| ||||||||| ||||||| |||||||||||| |||| |||    
T  27159221 agggaccaaaaatggaagaatataaaattacagggacaaaatctaaat--tttttttacaaggactaaaaccgaaattcgctaatattacaaggacgaaa 27159318  T
Q  132 agaggtatt 140  Q
    |||||||||    
T  27159319 agaggtatt 27159327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 6817378 - 6817432
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaat 79  Q
    ||||| ||| |||||| ||||||||||| ||||||||||| |||| |||||||||    
T  6817378 tgaaaggagtgaccaaaagtggaagaatatgaaattacagggacaaaatctaaat 6817432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 24651025 - 24651075
Alignment:
Q  93 ggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttac 143  Q
    ||||||||| || |||| ||||||||||||| ||| |||||||||||||||    
T  24651025 ggactaaaaccggaattcgctaatattacagagacgaaaagaggtatttac 24651075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 41424646 - 41424584
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaa 78  Q
    |||||||| | ||||||||||| || ||||||||||| |||||| |||| |||| ||||||||    
T  41424646 ctgacatgtttaaatgagggactaaaagtggaagaatctgaaatgacagggacagaatctaaa 41424584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 4919145 - 4919182
Alignment:
Q  27 aaatgagggaccaacagtggaagaatttgaaattacag 64  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  4919145 aaatgagggaccaaaagtggaggaatttgaaattacag 4919182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 7126072 - 7126109
Alignment:
Q  27 aaatgagggaccaacagtggaagaatttgaaattacag 64  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  7126072 aaatgagggaccaaaagtggaggaatttgaaattacag 7126109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 14144124 - 14144088
Alignment:
Q  27 aaatgagggaccaacagtggaagaatttgaaattaca 63  Q
    |||||||||||||| |||||| |||||||||||||||    
T  14144124 aaatgagggaccaaaagtggaggaatttgaaattaca 14144088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 31799965 - 31800013
Alignment:
Q  93 ggactaaaatcgaaatttgctaatattacagggacaaaaagaggtattt 141  Q
    ||||||||| || |||| |||||||||| |||||| |||||||||||||    
T  31799965 ggactaaaaccggaattcgctaatattatagggacgaaaagaggtattt 31800013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 23806200 - 23806328
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgcta 114  Q
    ||||| ||||| ||||||||||||| ||||||||||| ||||||||||| |||| ||||||||||         ||||||||||||| ||||||| ||||    
T  23806200 ctgacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccgaaattcgcta 23806299  T
Q  115 atattacagggacaaaaagaggtatttac 143  Q
    |||||||||||||||||||||||||||||    
T  23806300 atattacagggacaaaaagaggtatttac 23806328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 17850716 - 17850589
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    ||||| ||||| ||||||||| ||| ||||||||||| | |||||||||||||| ||||||||||        | |||||||||||||| |||| |||||    
T  17850716 ctgacgtggtggaatgagggatcaaaagtggaagaatcttaaattacagagacaaaatctaaatcttttttttatagggactaaaatcggaattcgctaa 17850617  T
Q  116 tattacagggacaaaaagaggtatttac 143  Q
    |||||||||||| |||||||||||||||    
T  17850616 tattacagggacgaaaagaggtatttac 17850589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 19251591 - 19251476
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattacagg 124  Q
    ||||| |||||||||| ||||||||||| ||||||||||| |||| ||||||||||        ||||||||||||| ||||||| ||||||||||||||    
T  19251591 tgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacagggactaaaaccgaaattcgctaatattacagg 19251492  T
Q  125 gacaaaaagaggtatt 140  Q
    ||| ||||||||||||    
T  19251491 gacgaaaagaggtatt 19251476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 15106315 - 15106454
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    ||||| ||||| ||||||||| ||| ||||||||||| ||||||||||| |||| |||||||||         ||||||||||||||||||||| |||||    
T  15106315 ctgacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaat-ttttttttacagggactaaaatcgaaattcgctaa 15106413  T
Q  116 tattacagggacaaaaagaggtatttactctaaaaacaaat 156  Q
    |||||| ||||| ||||||||||||||| | ||||| ||||    
T  15106414 tattacggggacgaaaagaggtatttacccaaaaaaaaaat 15106454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 151
Target Start/End: Original strand, 19251718 - 19251853
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    ||||| ||||||||||||||||| | ||||||||||| ||||||||||  |||| ||||||||||        ||||||||||||| || ||||  ||||    
T  19251718 ctgacgtggtgaaatgagggaccgaaagtggaagaatatgaaattacaaggacagaatctaaatcttttttttacagggactaaaaccggaattcactaa 19251817  T
Q  116 tattacagggacaaaaagaggtatttactctaaaaa 151  Q
    ||||||| |||| ||||||||||||||| |||||||    
T  19251818 tattacaaggacgaaaagaggtatttaccctaaaaa 19251853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 143
Target Start/End: Original strand, 26236349 - 26236470
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattac 121  Q
    ||||| ||||||||||||| | ||||||||| ||||||||||| |||| ||||||||||         || ||||||||| ||||||| |||||||||||    
T  26236349 tggtggaatgagggaccaaaaatggaagaatctgaaattacagggacaaaatctaaatcttttttttccaaggactaaaaccgaaattcgctaatattac 26236448  T
Q  122 agggacaaaaagaggtatttac 143  Q
    |||||| |||||||||||||||    
T  26236449 agggacgaaaagaggtatttac 26236470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 42670967 - 42671095
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgcta 114  Q
    ||||| || ||||| |||||||||| ||||||| ||| ||||||||||| |||||||||||||||         |||||||||||||  |||||| ||||    
T  42670967 ctgacgtgatgaaaggagggaccaaaagtggaaaaatatgaaattacagggacataatctaaatccttttttttacagggactaaaactgaaattcgcta 42671066  T
Q  115 atattacagggacaaaaagaggtatttac 143  Q
    ||| |||||||||||||||||||||||||    
T  42671067 atactacagggacaaaaagaggtatttac 42671095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 151
Target Start/End: Complemental strand, 26560684 - 26560550
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    ||||| ||||| ||| ||||||||| ||||||||||| ||||||||||| |||  ||||||||||        ||||||||||||||||||||| | |||    
T  26560684 ctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggactaaatctaaatcttttttt-acagggactaaaatcgaaattcgttaa 26560586  T
Q  116 tattacagggacaaaaagaggtatttactctaaaaa 151  Q
    |||||||||||| ||||||| |||| || |||||||    
T  26560585 tattacagggacgaaaagagatattaaccctaaaaa 26560550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 17850834 - 17850962
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgcta 114  Q
    ||||| || ||||| |||||||||| ||||||||||| ||||||||||| |||| |||||||| |         |||| |||||||| ||||||| ||||    
T  17850834 ctgacgtgatgaaaagagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaagcattttatttacagtgactaaaaccgaaattcgcta 17850933  T
Q  115 atattacagggacaaaaagaggtatttac 143  Q
    ||||||||||||| |||||||||||||||    
T  17850934 atattacagggacgaaaagaggtatttac 17850962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 20498883 - 20498742
Alignment:
Q  8 agattatactgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaa 107  Q
    ||||| ||||||| || | ||| |||||||||| ||||||||||| |||||| |||| ||||||||||||||         ||||||||||||| || ||    
T  20498883 agattctactgacgtgataaaaggagggaccaaaagtggaagaatctgaaat-acagggacataatctaaatattttttttacagggactaaaaccgtaa 20498785  T
Q  108 tttgctaatattacagggacaaaaagaggtatttactctaaaa 150  Q
    || ||||||||||||  ||| ||||||||||||||| ||||||    
T  20498784 ttcgctaatattacatagacgaaaagaggtatttaccctaaaa 20498742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 17463342 - 17463467
Alignment:
Q  19 acatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgctaata 117  Q
    |||||||| ||||||||| ||| ||||||||||| || |||||||| |||| ||||||||||         ||||||||||||| || |||| |||||||    
T  17463342 acatggtggaatgagggatcaaaagtggaagaatatgcaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaata 17463441  T
Q  118 ttacagggacaaaaagaggtatttac 143  Q
    |||||||| | |||||||||||||||    
T  17463442 ttacaggggcgaaaagaggtatttac 17463467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 140
Target Start/End: Complemental strand, 23854797 - 23854693
Alignment:
Q  37 ccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgctaatattacagggacaaaaagag 135  Q
    |||| ||||||||||| ||||||||||| |||| ||||||||||         ||||||||||||| ||||||| ||||||||||||||||| |||||||    
T  23854797 ccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccgaaattcgctaatattacagggacgaaaagag 23854698  T
Q  136 gtatt 140  Q
    |||||    
T  23854697 gtatt 23854693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 134
Target Start/End: Complemental strand, 26135938 - 26135828
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgctaatattacag 123  Q
    ||||| |||||||||| ||| ||||||| ||||||||||| |||| ||||||||||         |||||||||||||||| |||| |||||||||||||    
T  26135938 tgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaatcggaattcgctaatattacag 26135839  T
Q  124 ggacaaaaaga 134  Q
    |||| ||||||    
T  26135838 ggacgaaaaga 26135828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 161
Target Start/End: Complemental strand, 34548711 - 34548558
Alignment:
Q  8 agattatactgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaa 107  Q
    ||||| ||||||| || ||||| ||| ||||||  |||||| ||| ||||||||||  |||| ||||||||||        ||||||||||||| | |||    
T  34548711 agattctactgacgtgatgaaaggagtgaccaaaggtggaacaatatgaaattacatggacaaaatctaaatcttttttttacagggactaaaaccaaaa 34548612  T
Q  108 tttgctaatattacagggacaaaaagaggtatttactctaaaaacaaatataat 161  Q
    ||  |||||||||||||||| |||||| |||||||| | ||||| ||| |||||    
T  34548611 ttcactaatattacagggacgaaaagaagtatttacccaaaaaagaaaaataat 34548558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 143
Target Start/End: Original strand, 22263431 - 22263569
Alignment:
Q  8 agattatactgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc---nnnnnnnnacagggactaaaatcg 104  Q
    ||||||| ||||| || ||||| |||||||||| ||||||||||| ||||||||||| |||| ||||| ||||           |||| |||||||| ||    
T  22263431 agattatgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctgaatctttttttttttacagagactaaaaccg 22263530  T
Q  105 aaatttgctaatattacagggacaaaaagaggtatttac 143  Q
     |||| |||||||||||||| || |||||||||||||||    
T  22263531 gaattcgctaatattacaggaacgaaaagaggtatttac 22263569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 39878232 - 39878105
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaat-cnnnnnnnnacagggactaaaatcgaaatttgcta 114  Q
    ||||| || ||||| ||| |||||| ||||||||||| |||||||||||| |||||||||||||          ||||||||||||| || |||| ||||    
T  39878232 ctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattacagatacataatctaaatatctttttttacagggactaaaaccggaattcgcta 39878133  T
Q  115 atattacagggacaaaaagaggtatttac 143  Q
    |||||||| ||||||||| ||||||||||    
T  39878132 atattacaaggacaaaaa-aggtatttac 39878105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 15106197 - 15106069
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgcta 114  Q
    ||||| || ||||| |||||||||| ||||||| ||| | ||||||||| |||| ||||||||||         ||||||| ||||| ||||||| ||||    
T  15106197 ctgacgtgatgaaaggagggaccaaaagtggaataatctaaaattacagggacaaaatctaaatctttttatttacagggattaaaaccgaaattcgcta 15106098  T
Q  115 atattacagggacaaaaagaggtatttac 143  Q
    ||||||| ||||| ||||||| |||||||    
T  15106097 atattacggggacgaaaagagatatttac 15106069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 22263321 - 22263257
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc 80  Q
    ||||| ||||| ||| ||||||||| ||||||||||| ||||||||||| |||| ||||||||||    
T  22263321 ctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc 22263257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 141
Target Start/End: Complemental strand, 30390583 - 30390463
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaa-atcnnnnnnnnacagggactaaaatcgaaatttgctaatatta 120  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||| |||| |||||||  |         ||||||| |||||||| |||| ||||||||||    
T  30390583 tggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaattttttttttttacagggattaaaatcggaattcgctaatatta 30390484  T
Q  121 cagggacaaaaagaggtattt 141  Q
    || |||| ||||||| |||||    
T  30390483 catggacgaaaagagatattt 30390463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 23854914 - 23854977
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaat 79  Q
    ||||| || ||||| |||||||||| ||||||||||| | |||||||||||||| |||||||||    
T  23854914 ctgacgtgatgaaaggagggaccaaaagtggaagaatataaaattacagagacaaaatctaaat 23854977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 26560880 - 26560931
Alignment:
Q  92 gggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttac 143  Q
    ||||||||||||| |||| |||||||||||| |||| |||||||||||||||    
T  26560880 gggactaaaatcggaattcgctaatattacaaggacgaaaagaggtatttac 26560931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 140
Target Start/End: Complemental strand, 30958740 - 30958689
Alignment:
Q  89 acagggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatt 140  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||    
T  30958740 acagggactaaaaccgaaattcgctaatattacagggaccaaaagtggtatt 30958689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 13254690 - 13254732
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacag 64  Q
    ||||||||||||||||||| ||||||||||| |||||||||||    
T  13254690 tggtgaaatgagggaccaaaagtggaagaatctgaaattacag 13254732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 20498999 - 20499057
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc 80  Q
    ||||||||||| ||||||| |||| |||||| ||||||||||| |||| ||||||||||    
T  20498999 tggtgaaatgaaggaccaaaagtgaaagaatctgaaattacagggacaaaatctaaatc 20499057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 26236257 - 26236124
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc-nnnnnnnnacagggactaaaatcgaaatttgcta 114  Q
    ||||| || ||||| |||||||||| |||| |||||| ||||||||||| |||| ||| ||||||         ||||||||||||| |  |||| ||||    
T  26236257 ctgacgtgatgaaaggagggaccaaaagtgaaagaatctgaaattacagggacaaaatataaatctttttttatacagggactaaaaccagaattcgcta 26236158  T
Q  115 atattacagggacaaaaagaggtatttactctaa 148  Q
    |||||||| |||| ||||||| ||||||| ||||    
T  26236157 atattacaaggacgaaaagagatatttaccctaa 26236124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 13284735 - 13284779
Alignment:
Q  89 acagggactaaaatcgaaatttgctaatattacagggacaaaaag 133  Q
    ||||||||||||| ||||||| ||||||||||||||||| |||||    
T  13284735 acagggactaaaaccgaaattcgctaatattacagggaccaaaag 13284779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 13284532 - 13284485
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagaca 69  Q
    |||||||||||||||| || ||||||||||| ||||||||||| ||||    
T  13284532 tggtgaaatgagggactaaaagtggaagaatatgaaattacagggaca 13284485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 140
Target Start/End: Complemental strand, 42670773 - 42670722
Alignment:
Q  89 acagggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatt 140  Q
    ||||||||||||| || |||| |||| |||||||||||| ||||||||||||    
T  42670773 acagggactaaaaccggaattcgctactattacagggacgaaaagaggtatt 42670722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 150
Target Start/End: Complemental strand, 13254618 - 13254492
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgctaatattacag 123  Q
    ||||| |||| ||||| |||| |||||| ||||||||||  |||| ||||||||||         ||||||| ||||| | ||||| |||||||||||||    
T  13254618 tgaaaggaggaaccaaaagtgaaagaatctgaaattacaaggacaaaatctaaatcttttattttacagggagtaaaaccaaaattcgctaatattacag 13254519  T
Q  124 ggacaaaaagaggtatttactctaaaa 150  Q
    | ||  |||||||||||||| ||||||    
T  13254518 gaacggaaagaggtatttaccctaaaa 13254492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 17463212 - 17463094
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattacagg 124  Q
    |||||||||||||||| ||||| ||||  ||||||||||| |||| ||||||| |         |||| |||||||| || |||| |||||||||| |||    
T  17463212 tgaaatgagggaccaaaagtgggagaacctgaaattacagggacaaaatctaatttttttttttacagcgactaaaaccggaattcgctaatattatagg 17463113  T
Q  125 gacaaaaagaggtatttac 143  Q
    ||| ||||||  |||||||    
T  17463112 gacgaaaagaactatttac 17463094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 26136143 - 26136193
Alignment:
Q  93 ggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttac 143  Q
    ||||||||| ||||||| | |||||||||| |||| |||||||||||||||    
T  26136143 ggactaaaaccgaaattcgttaatattacaaggacgaaaagaggtatttac 26136193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 33290298 - 33290344
Alignment:
Q  17 tgacatggtgaaatgagggaccaacagtggaagaatttgaaattaca 63  Q
    |||| ||||||||| ||||||||| ||||||||||| ||||||||||    
T  33290298 tgacgtggtgaaattagggaccaaaagtggaagaatatgaaattaca 33290344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 12419046 - 12419095
Alignment:
Q  91 agggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatt 140  Q
    ||||||||||| || |||| ||||||||||||||||| ||||| ||||||    
T  12419046 agggactaaaaccggaattcgctaatattacagggaccaaaagtggtatt 12419095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 12431106 - 12431155
Alignment:
Q  91 agggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatt 140  Q
    ||||||||||| || |||| ||||||||||||||||| ||||| ||||||    
T  12431106 agggactaaaaccggaattcgctaatattacagggaccaaaagtggtatt 12431155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 13254758 - 13254811
Alignment:
Q  89 acagggactaaaatcgaaatttgctaatattacagggacaaaaagaggtattta 142  Q
    |||| |||||||| || |||| ||||||||||||||||| ||||||| ||||||    
T  13254758 acagagactaaaaccggaattcgctaatattacagggacgaaaagagatattta 13254811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 22263346 - 22263383
Alignment:
Q  27 aaatgagggaccaacagtggaagaatttgaaattacag 64  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  22263346 aaatgagggaccaaaagtggaggaatttgaaattacag 22263383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 23854821 - 23854858
Alignment:
Q  27 aaatgagggaccaacagtggaagaatttgaaattacag 64  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  23854821 aaatgagggaccaaaagtggaggaatttgaaattacag 23854858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 143
Target Start/End: Original strand, 23855033 - 23855070
Alignment:
Q  106 aatttgctaatattacagggacaaaaagaggtatttac 143  Q
    |||| ||||||||||||||||| |||||||||||||||    
T  23855033 aattcgctaatattacagggacgaaaagaggtatttac 23855070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 42670849 - 42670788
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaa 77  Q
    ||||| ||||| ||| ||||||||| ||||||||||| ||||||||||  |||| |||||||    
T  42670849 ctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaa 42670788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 79
Target Start/End: Original strand, 44098896 - 44098933
Alignment:
Q  42 agtggaagaatttgaaattacagagacataatctaaat 79  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  44098896 agtggaagaatctgaaattacagggacataatctaaat 44098933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 7e-27; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 42113114 - 42112993
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    ||||| ||||||||||||||||||| |||| |||||| | ||||||||| |||||||||||||||        |||||||||||||||| |||| |||||    
T  42113114 ctgacgtggtgaaatgagggaccaaaagtgaaagaatcttaaattacagggacataatctaaatcttttttttacagggactaaaatcggaattcgctaa 42113015  T
Q  116 tattacagggacaaaaagaggt 137  Q
    |||||||||||| |||||||||    
T  42113014 tattacagggacgaaaagaggt 42112993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 143
Target Start/End: Complemental strand, 43851788 - 43851667
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattac 121  Q
    ||||| ||||||||| ||| ||||||||||| ||||||||||| |||| ||||||||||        ||||||||||||| || |||| |||||||||||    
T  43851788 tggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttgtttacagggactaaaaccggaattcgctaatattac 43851689  T
Q  122 agggacaaaaagaggtatttac 143  Q
    |||||| |||||||||||||||    
T  43851688 agggacgaaaagaggtatttac 43851667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 30789631 - 30789519
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattac 121  Q
    ||||||||||||||| ||| |||||| |||| |||||||||||||||| ||||||||||        |||||||||||||||| |||| |||||||||||    
T  30789631 tggtgaaatgagggatcaaaagtggaggaatctgaaattacagagacaaaatctaaatcttttttttacagggactaaaatcggaattcgctaatattac 30789532  T
Q  122 agggacaaaaaga 134  Q
    |||||| ||||||    
T  30789531 agggacgaaaaga 30789519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 14820415 - 14820297
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattacagg 124  Q
    ||||| |||||||||| ||||||||||| ||||||||||| |||| ||||||||||        ||||| ||||||| || |||| ||||||||||||||    
T  14820415 tgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacaggaactaaaaccggaattcgctaatattacagg 14820316  T
Q  125 gacaaaaagaggtatttac 143  Q
    ||| |||||||||||||||    
T  14820315 gacgaaaagaggtatttac 14820297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 10108618 - 10108743
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgcta 114  Q
    ||||| ||||| ||| ||||||||| ||||||||||| ||||||||||| |||| ||||||||||         ||||||||||||| || |||||||||    
T  10108618 ctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaatttgcta 10108717  T
Q  115 atattacagggacaaaaagaggtatt 140  Q
    ||||||||||||| ||||||||||||    
T  10108718 atattacagggacgaaaagaggtatt 10108743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 10108500 - 10108372
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgcta 114  Q
    ||||| || ||||| |||||||||| ||||||||||| ||||||||||| |||| ||||||||||         ||||||||||||| || |||| ||||    
T  10108500 ctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgcta 10108401  T
Q  115 atattacagggacaaaaagaggtatttac 143  Q
    ||||||||||||| |||||||||||||||    
T  10108400 atattacagggacgaaaagaggtatttac 10108372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 21148067 - 21147941
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn--acagggactaaaatcgaaatttgct 113  Q
    ||||| ||||| ||| ||||||||| ||||||||||| ||||||||||| |||| ||||||||||          ||||||||||||| || |||| |||    
T  21148067 ctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaaaccggaattcgct 21147968  T
Q  114 aatattacagggacaaaaagaggtatt 140  Q
    |||||||||||||||||||||||||||    
T  21147967 aatattacagggacaaaaagaggtatt 21147941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 5555117 - 5555239
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc-nnnnnnnnacagggactaaaatcgaaatttgcta 114  Q
    ||||||||||| ||| ||||||||| ||||||||||| ||||||||||| |||| ||||||||||         |||| |||||||| ||||||| ||||    
T  5555117 ctgacatggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagagactaaaaccgaaattcgcta 5555216  T
Q  115 atattacagggacaaaaagaggt 137  Q
    ||||||||||||| |||||||||    
T  5555217 atattacagggacgaaaagaggt 5555239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 14820542 - 14820667
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc-nnnnnnnnacagggactaaaatcgaaatttgcta 114  Q
    ||||| ||||| ||| ||||||||| ||||||||||| ||||||||||| |||| ||||||||||         ||||||||||||| || |||| ||||    
T  14820542 ctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgcta 14820641  T
Q  115 atattacagggacaaaaagaggtatt 140  Q
    ||||||||||||| ||||||||||||    
T  14820642 atattacagggactaaaagaggtatt 14820667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 7689771 - 7689899
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgcta 114  Q
    ||||| ||||| ||||||||| ||| ||||||||||| ||||||||||| |||| ||| ||||||         ||| |||||||||||| |||| ||||    
T  7689771 ctgacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaatttaaatctttttttttacacggactaaaatcggaattcgcta 7689870  T
Q  115 atattacagggacaaaaagaggtatttac 143  Q
    ||||||||||||| |||||||||||||||    
T  7689871 atattacagggacgaaaagaggtatttac 7689899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 30789755 - 30789883
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgcta 114  Q
    ||||| || ||||| || ||||||| ||||||||||| ||||||||||| |||| ||||||||||         ||||||||||||| || ||||| |||    
T  30789755 ctgacgtgatgaaacgatggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccggaatttacta 30789854  T
Q  115 atattacagggacaaaaagaggtatttac 143  Q
    ||||||||||||| |||||||||||||||    
T  30789855 atattacagggacgaaaagaggtatttac 30789883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 17623017 - 17622892
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    ||||| ||||| ||||||||||||| ||||||||||| | |||||||||| ||| ||||||||||        |||||||||||||  |||||| |||||    
T  17623017 ctgacgtggtggaatgagggaccaaaagtggaagaatctaaaattacaga-acaaaatctaaatcttttttt-acagggactaaaactgaaattcgctaa 17622920  T
Q  116 tattacagggacaaaaagaggtatttac 143  Q
    ||||||| |||| |||||||||||||||    
T  17622919 tattacaaggacgaaaagaggtatttac 17622892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 150
Target Start/End: Complemental strand, 5554983 - 5554864
Alignment:
Q  32 agggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgctaatattacagggacaaa 130  Q
    ||||||||| ||||||||||| |||||||| || |||| ||||| ||||         ||||||||||||| || |||| ||||||||||||||||| ||    
T  5554983 agggaccaaaagtggaagaatatgaaattatagggacaaaatctgaatctttttttttacagggactaaaaccggaattcgctaatattacagggacgaa 5554884  T
Q  131 aagaggtatttactctaaaa 150  Q
    ||||||||||||| ||||||    
T  5554883 aagaggtatttaccctaaaa 5554864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 42113232 - 42113357
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    |||||||| ||||| |||||| ||| |||||||||||||||||||| || |||||||||||| |         ||||| ||||||| ||||||| | |||    
T  42113232 ctgacatgatgaaaggagggatcaaaagtggaagaatttgaaattaaagggacataatctaatt--tttttttacaggaactaaaaccgaaattcgttaa 42113329  T
Q  116 tattacagggacaaaaagaggtatttac 143  Q
    |||||||||||| |||||| ||||||||    
T  42113330 tattacagggacgaaaagatgtatttac 42113357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 10171391 - 10171525
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgcta 114  Q
    |||||||| || ||||||||||||| |||| |||||| | ||||||||| |||| |||||||||          ||||||||||||| || |||| ||||    
T  10171391 ctgacatgatggaatgagggaccaaaagtgaaagaatctaaaattacagggacaaaatctaaatagttttttttacagggactaaaaccggaattcgcta 10171490  T
Q  115 atattacagggacaaaaagaggtatttactctaaa 149  Q
    ||||||||||||| ||||| ||||||||| |||||    
T  10171491 atattacagggacgaaaagcggtatttaccctaaa 10171525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 17623135 - 17623261
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    ||||| || ||||| ||| |||||| ||||||||||||||||||||||  |||| ||||||||||        ||||| ||||||| |  |||| |||||    
T  17623135 ctgacgtgatgaaaggagtgaccaaaagtggaagaatttgaaattacaaggacaaaatctaaatcttttttttacaggcactaaaaccagaattggctaa 17623234  T
Q  116 tattacagggacaaaaagaggtattta 142  Q
    |||||||||||  ||||||||||||||    
T  17623235 tattacagggatgaaaagaggtattta 17623261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 149
Target Start/End: Complemental strand, 7689644 - 7689520
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgctaatattacag 123  Q
    ||||| |||||||||| ||||||||||| ||||||||||  |||| ||||||||||         ||| ||||||||  ||||||| |||||||||||||    
T  7689644 tgaaaagagggaccaaaagtggaagaatctgaaattacaaggaca-aatctaaatctttttatttacaaggactaaagccgaaattcgctaatattacag 7689546  T
Q  124 ggacaaaaagaggtatttactctaaa 149  Q
    |||| ||||||||||||||| |||||    
T  7689545 ggacgaaaagaggtatttaccctaaa 7689520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 143
Target Start/End: Original strand, 14767826 - 14767880
Alignment:
Q  89 acagggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttac 143  Q
    ||||||||||||| |||||||| ||||||||||||| || |||||||||||||||    
T  14767826 acagggactaaaaacgaaatttactaatattacaggaacgaaaagaggtatttac 14767880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 151
Target Start/End: Complemental strand, 20875750 - 20875692
Alignment:
Q  93 ggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttactctaaaaa 151  Q
    ||||||||| ||||||||||| ||||||||||||| |||||||||||| || |||||||    
T  20875750 ggactaaaaccgaaatttgctcatattacagggaccaaaagaggtattaaccctaaaaa 20875692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 22494638 - 22494696
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc 80  Q
    ||||| ||||||||||||| ||||||||||||||||||||||| |||| | ||||||||    
T  22494638 tggtggaatgagggaccaaaagtggaagaatttgaaattacagggacaaattctaaatc 22494696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 143
Target Start/End: Original strand, 26136939 - 26137060
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattac 121  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||| |||| ||||||| |           |||||||||||  ||||||  ||||||||||    
T  26136939 tggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaattttttttttactagggactaaaactgaaattcactaatattac 26137038  T
Q  122 agggacaaaaagaggtatttac 143  Q
    |||||| ||||| |||||||||    
T  26137039 agggacgaaaagtggtatttac 26137060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 26532913 - 26532849
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc 80  Q
    ||||| ||||| ||||||||| ||| ||||||| ||||||||||||||| |||| ||||||||||    
T  26532913 ctgacgtggtggaatgagggatcaaaagtggaaaaatttgaaattacagggacaaaatctaaatc 26532849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 18044153 - 18044203
Alignment:
Q  93 ggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttac 143  Q
    ||||||||| || |||| ||||||||||||||||| |||||||||||||||    
T  18044153 ggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttac 18044203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 143
Target Start/End: Original strand, 42606019 - 42606129
Alignment:
Q  34 ggaccaacagtggaagaatttgaaattacagagacataatctaaatc-nnnnnnnnacagggactaaaatcgaaatttgctaatattacagggacaaaaa 132  Q
    ||||||| ||||||||||||||||||||| | |||| ||||||||||         |||  |||||||| |  |||| ||||||||||||||||||||||    
T  42606019 ggaccaaaagtggaagaatttgaaattacggggacaaaatctaaatctttttttttacattgactaaaaccagaattcgctaatattacagggacaaaaa 42606118  T
Q  133 gaggtatttac 143  Q
    ||| |||||||    
T  42606119 gagatatttac 42606129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 143
Target Start/End: Complemental strand, 2583370 - 2583322
Alignment:
Q  95 actaaaatcgaaatttgctaatattacagggacaaaaagaggtatttac 143  Q
    ||||||||||||||| |||||||||||||| |  |||||||||||||||    
T  2583370 actaaaatcgaaattcgctaatattacaggaatgaaaagaggtatttac 2583322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 14767637 - 14767573
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc 80  Q
    ||||| ||||| ||| ||||||||| ||||||| ||| ||||||||||| |||| ||||||||||    
T  14767637 ctgacgtggtggaataagggaccaaaagtggaaaaatctgaaattacagggacaaaatctaaatc 14767573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 21148184 - 21148312
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgcta 114  Q
    |||||||| ||||| ||||||| || ||||||||||| ||||||||||  |||| ||||||| |          ||||||||||||| || ||||  |||    
T  21148184 ctgacatgatgaaaggagggactaaaagtggaagaatatgaaattacaaggacaaaatctaattttttttttttacagggactaaaaccggaattcacta 21148283  T
Q  115 atattacagggacaaaaagaggtatttac 143  Q
    ||||||||| ||| |||||||||||||||    
T  21148284 atattacagagacgaaaagaggtatttac 21148312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 35367466 - 35367406
Alignment:
Q  89 acagggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttactctaaa 149  Q
    ||||||| ||||| || |||| ||||||||| ||||||| ||||||||||||||| |||||    
T  35367466 acagggattaaaaccggaattcgctaatattgcagggaccaaaagaggtatttaccctaaa 35367406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 143
Target Start/End: Original strand, 43481581 - 43481691
Alignment:
Q  35 gaccaacagtggaagaatttgaaattacagagacataatctaaatc--nnnnnnnnacagggactaaaatcgaaatttgctaatattacagggacaaaaa 132  Q
    |||||| ||||||||||||||||||||||| |||| ||| ||||||          |||| |||||||| || |||| ||||||||||||| ||| ||||    
T  43481581 gaccaagagtggaagaatttgaaattacagggacaaaatttaaatcttttttttttacagagactaaaaccggaattcgctaatattacagtgacgaaaa 43481680  T
Q  133 gaggtatttac 143  Q
    ||| |||||||    
T  43481681 gagatatttac 43481691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 64
Target Start/End: Complemental strand, 10108593 - 10108556
Alignment:
Q  27 aaatgagggaccaacagtggaagaatttgaaattacag 64  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  10108593 aaatgagggaccaaaagtggaggaatttgaaattacag 10108556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 20877069 - 20877118
Alignment:
Q  91 agggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatt 140  Q
    ||||||||||| || |||| ||| ||||||||||||| ||||||||||||    
T  20877069 agggactaaaaccggaattcgctcatattacagggaccaaaagaggtatt 20877118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 7e-27; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 22 - 143
Target Start/End: Complemental strand, 18500438 - 18500317
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattac 121  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||| |||| ||||||||||        ||||||||||||| ||||||| ||||||||||     
T  18500438 tggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttcttacagggactaaaaccgaaattcgctaatattat 18500339  T
Q  122 agggacaaaaagaggtatttac 143  Q
    |||||| |||||||||||||||    
T  18500338 agggacgaaaagaggtatttac 18500317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 32017752 - 32017879
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    ||||| || ||||| |||||||||| ||||||||||| ||||||||||| |||| ||||||||||        ||||||||||||| || |||| |||||    
T  32017752 ctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacagggactaaaaccggaattcgctaa 32017851  T
Q  116 tattacagggacaaaaagaggtatttac 143  Q
    |||||||||||| ||||||| |||||||    
T  32017852 tattacagggacgaaaagagatatttac 32017879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 9481312 - 9481184
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgcta 114  Q
    ||||| || ||||| |||||||||| | ||||||||| ||||||||||| |||||||||||||||         ||||||||||||| || |||| ||||    
T  9481312 ctgacgtgatgaaaggagggaccaaaattggaagaatatgaaattacagggacataatctaaatccttttttttacagggactaaaaccggaattcgcta 9481213  T
Q  115 atattacagggacaaaaagaggtatttac 143  Q
    ||||||||||||| |||||||||||||||    
T  9481212 atattacagggacgaaaagaggtatttac 9481184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 143
Target Start/End: Original strand, 24732192 - 24732313
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc-nnnnnnnnacagggactaaaatcgaaatttgctaatatta 120  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||  |||| ||||||||||         ||||||||| |||| | |||| ||||||||||    
T  24732192 tggtggaatgagggaccaaaagtggaagaatatgaaattacatggacaaaatctaaatctttttttttacagggact-aaattggaattcgctaatatta 24732290  T
Q  121 cagggacaaaaagaggtatttac 143  Q
    ||||||| |||||||||||||||    
T  24732291 cagggacgaaaagaggtatttac 24732313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 26385596 - 26385649
Alignment:
Q  89 acagggactaaaatcgaaatttgctaatattacagggacaaaaagaggtattta 142  Q
    |||||||||||||||| |||| ||||||||||||||||| ||||||||||||||    
T  26385596 acagggactaaaatcggaattcgctaatattacagggacgaaaagaggtattta 26385649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 9854135 - 9854198
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaat 79  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||||||||  |||| |||||||||    
T  9854135 ctgacgtggtgaaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaat 9854198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 14681012 - 14680949
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaat 79  Q
    ||||| ||||||||||| ||||||| ||||||||||| |||||||||| ||||| |||||||||    
T  14681012 ctgacgtggtgaaatgaaggaccaaaagtggaagaatatgaaattacaaagacaaaatctaaat 14680949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 19284258 - 19284195
Alignment:
Q  17 tgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc 80  Q
    ||||||| ||||| |||||||||| ||||||||||| ||||||||||| |||| ||||||||||    
T  19284258 tgacatgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 19284195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 17142798 - 17142744
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaat 79  Q
    ||||| ||| |||||| ||||||||||||||||||||||| ||||||||||||||    
T  17142798 tgaaacgagagaccaaaagtggaagaatttgaaattacagggacataatctaaat 17142744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 18500655 - 18500705
Alignment:
Q  93 ggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttac 143  Q
    ||||||||| ||||||| ||||||||||||||||| |||||||||||||||    
T  18500655 ggactaaaaccgaaattcgctaatattacagggacgaaaagaggtatttac 18500705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 143
Target Start/End: Complemental strand, 24731991 - 24731937
Alignment:
Q  89 acagggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttac 143  Q
    ||||||||||||| || |||| ||||||||||||||||| |||||||||||||||    
T  24731991 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttac 24731937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 143
Target Start/End: Complemental strand, 26385402 - 26385280
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc-nnnnnnnnacagggactaaaatcgaaatttgctaatatta 120  Q
    ||||| ||||||||||||| ||||||||||| | ||||||||| |||| ||||||||||         ||| ||||||||| |  |||| ||||||||||    
T  26385402 tggtggaatgagggaccaaaagtggaagaatataaaattacagggacaaaatctaaatctttttttctacatggactaaaaccagaattcgctaatatta 26385303  T
Q  121 cagggacaaaaagaggtatttac 143  Q
    ||| ||| |||||||||||||||    
T  26385302 cagagacgaaaagaggtatttac 26385280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 30459031 - 30458903
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc--nnnnnnnnacagggactaaaatcgaaatttgct 113  Q
    ||||| |||||||||||| ||| || ||| ||||||| ||||||||||| |||||||||||||||          || || ||||||| |||||||  ||    
T  30459031 ctgacgtggtgaaatgagagactaaaagttgaagaatctgaaattacagtgacataatctaaatcttttttttttacgggaactaaaaccgaaattcact 30458932  T
Q  114 aatattacagggacaaaaagaggtattta 142  Q
    |||||||||||||| |||||| |||||||    
T  30458931 aatattacagggacgaaaagatgtattta 30458903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 10321860 - 10321737
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    ||||| ||||||||||||||| ||| |||| |||||| ||||||||||| || |||||||||            |||||||||||| || |||| |||||    
T  10321860 ctgacgtggtgaaatgagggagcaaaagtgtaagaatatgaaattacagggatataatctaa--tattttttttcagggactaaaaccggaattcgctaa 10321763  T
Q  116 tattacagggacaaaaagaggtattt 141  Q
    |||||||||||| |||||| ||||||    
T  10321762 tattacagggacgaaaagaagtattt 10321737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 33714611 - 33714553
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc 80  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||  |||| ||||||||||    
T  33714611 tggtggaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatc 33714553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 9481430 - 9481494
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc 80  Q
    ||||| ||||| ||| ||||||||| ||||||||||| ||||||||||  |||| ||||||||||    
T  9481430 ctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatc 9481494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 24732078 - 24732007
Alignment:
Q  6 gtagattatactgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaa 77  Q
    |||||||||  |||| || ||||| |||||||||| ||| ||||||| ||||||||||| |||| |||||||    
T  24732078 gtagattatgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaa 24732007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 2299635 - 2299697
Alignment:
Q  89 acagggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttactctaaaaa 151  Q
    ||||| ||||||| || |||| |||||||||||||| || ||||||| ||||||| |||||||    
T  2299635 acaggaactaaaaccggaattcgctaatattacaggaacgaaaagagatatttaccctaaaaa 2299697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 140
Target Start/End: Complemental strand, 9154982 - 9154884
Alignment:
Q  44 tggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgctaa-tattacagggacaaaaagaggtatt 140  Q
    ||||||||| ||||||||||| |||| ||||||||||         |||||||||||||||| |||| ||||| |||||||||||  ||||||||||||    
T  9154982 tggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaatcggaattcgctaaatattacagggaggaaaagaggtatt 9154884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 30618019 - 30617969
Alignment:
Q  93 ggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttac 143  Q
    |||||||||||  ||||  |||||||||||||||| |||||||||||||||    
T  30618019 ggactaaaatcagaattcactaatattacagggacgaaaagaggtatttac 30617969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 32017596 - 32017550
Alignment:
Q  89 acagggactaaaatcgaaatttgctaatattacagggacaaaaagag 135  Q
    |||| |||||||||||||||| |||||||| ||| ||||||||||||    
T  32017596 acagagactaaaatcgaaattcgctaatatcacatggacaaaaagag 32017550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 3229995 - 3229962
Alignment:
Q  110 tgctaatattacagggacaaaaagaggtatttac 143  Q
    |||||||||||||||||||||||||| |||||||    
T  3229995 tgctaatattacagggacaaaaagagatatttac 3229962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 79
Target Start/End: Original strand, 15942410 - 15942447
Alignment:
Q  42 agtggaagaatttgaaattacagagacataatctaaat 79  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  15942410 agtggaagaatatgaaattatagagacataatctaaat 15942447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 64
Target Start/End: Complemental strand, 30618184 - 30618147
Alignment:
Q  27 aaatgagggaccaacagtggaagaatttgaaattacag 64  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  30618184 aaatgagggaccaaaagtggaggaatttgaaattacag 30618147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 32017691 - 32017728
Alignment:
Q  27 aaatgagggaccaacagtggaagaatttgaaattacag 64  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  32017691 aaatgagggaccaaaagtggaggaatttgaaattacag 32017728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 33714642 - 33714683
Alignment:
Q  27 aaatgagggaccaacagtggaagaatttgaaattacagagac 68  Q
    |||||||||||||| |||||| |||| |||||||||||||||    
T  33714642 aaatgagggaccaaaagtggaggaatctgaaattacagagac 33714683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 30618077 - 30618029
Alignment:
Q  31 gagggaccaacagtggaagaatttgaaattacagagacataatctaaat 79  Q
    |||||||||| ||||||| ||| ||||||||||| |||| |||||||||    
T  30618077 gagggaccaaaagtggaacaatatgaaattacagggacaaaatctaaat 30618029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 150
Target Start/End: Original strand, 4817 - 4945
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattac 121  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||  |||| ||||||||||        ||||||| ||||| || ||||||||||||||||    
T  4817 tggtggaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatcttatttttacagggattaaaaccggaatttgctaatattac 4916  T
Q  122 agggacaaaaagaggtatttactctaaaa 150  Q
    |||||| ||||||||||||||| ||||||    
T  4917 agggacgaaaagaggtatttaccctaaaa 4945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 143
Target Start/End: Complemental strand, 4618 - 4564
Alignment:
Q  89 acagggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttac 143  Q
    |||||||||||||||| |||| |||||||||||| |||| |||||||||||||||    
T  4618 acagggactaaaatcggaattcgctaatattacaaggacgaaaagaggtatttac 4564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 4e-25; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 23704915 - 23705041
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattac 121  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||| |||| ||||||||||        ||||||||||||| || |||| |||||||||||    
T  23704915 tggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacagggactaaaaccggaattcgctaatattac 23705014  T
Q  122 agggacaaaaagaggtatttactctaa 148  Q
    || ||| ||||||||||||||| ||||    
T  23705015 agagacgaaaagaggtatttaccctaa 23705041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 151
Target Start/End: Complemental strand, 12006664 - 12006535
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattac 121  Q
    ||||| ||||||||| ||| ||||||||||| ||||||||||| |||| ||||||| |         |||||||||||||||| |||| |||||||||||    
T  12006664 tggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaatctaatttttttttttacagggactaaaatcggaattcgctaatattac 12006565  T
Q  122 agggacaaaaagaggtatttactctaaaaa 151  Q
    |||||| ||||||||||||||| |||||||    
T  12006564 agggacgaaaagaggtatttaccctaaaaa 12006535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 41600206 - 41600334
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgcta 114  Q
    ||||| || ||||| |||||||||| ||||||||||| ||||||||||| |||| ||||||||||         ||||||||||||| || |||| ||||    
T  41600206 ctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccggaattcgcta 41600305  T
Q  115 atattacagggacaaaaagaggtatttac 143  Q
    |||||||||||||||||||||||||||||    
T  41600306 atattacagggacaaaaagaggtatttac 41600334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 28218309 - 28218180
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc--nnnnnnnnacagggactaaaatcgaaatttgct 113  Q
    ||||| ||||| ||||||||||||| ||||||||||| ||||||||||| |||| ||||||||||          ||||||||||||| || |||| |||    
T  28218309 ctgacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaaaccggaattcgct 28218210  T
Q  114 aatattacagggacaaaaagaggtatttac 143  Q
    |||||||||||||| |||||||||||||||    
T  28218209 aatattacagggacgaaaagaggtatttac 28218180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 143
Target Start/End: Original strand, 10409628 - 10409749
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattac 121  Q
    ||||| ||||||||| ||| ||||||||||| | |||||||||||||| ||||||||||        |||||||||||||||| |||| |||||||||||    
T  10409628 tggtggaatgagggatcaaaagtggaagaatctaaaattacagagacaaaatctaaatcttttttttacagggactaaaatcggaattcgctaatattac 10409727  T
Q  122 agggacaaaaagaggtatttac 143  Q
    | |||  |||||||||||||||    
T  10409728 atggatgaaaagaggtatttac 10409749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 143
Target Start/End: Complemental strand, 25772487 - 25772366
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattac 121  Q
    ||||| ||||||||| ||| ||||||||||| ||||||||||  |||| ||||||||||        ||||  ||||||||||||||| |||||||||||    
T  25772487 tggtggaatgagggaacaaaagtggaagaatatgaaattacaaggacaaaatctaaatcttttttttacagaaactaaaatcgaaattcgctaatattac 25772388  T
Q  122 agggacaaaaagaggtatttac 143  Q
    |||||| |||||||||||||||    
T  25772387 agggacgaaaagaggtatttac 25772366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 16995329 - 16995202
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    ||||| ||||| |||| |||||||| ||||||||||| ||||||||||| |||| |||||||||         ||||| ||||||| ||||||| |||||    
T  16995329 ctgacgtggtggaatgtgggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatattttttttacaggaactaaaaccgaaattcgctaa 16995230  T
Q  116 tattacagggacaaaaagaggtatttac 143  Q
    |||||||| ||| |||||||||||||||    
T  16995229 tattacagagacgaaaagaggtatttac 16995202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 28218420 - 28218539
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgctaatattacag 123  Q
    ||||| |||||||||| ||||||||||| ||||||||||| |||| ||||||||||         ||||||||||||| || |||| |||||||||||||    
T  28218420 tgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccggaattcgctaatattacag 28218519  T
Q  124 ggacaaaaagaggtatttac 143  Q
    |||| |||||||||||||||    
T  28218520 ggacgaaaagaggtatttac 28218539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 12006788 - 12006921
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc-nnnnnnnnacagggactaaaatcgaaatttgcta 114  Q
    ||||| || ||||| |||||||||| ||||||||||| ||||||||||| |||| ||||||||||         |||||||||||||||| |||| ||||    
T  12006788 ctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaatcggaattcgcta 12006887  T
Q  115 atattacagggacaaaaagaggtatttactctaa 148  Q
    |||||||| | || ||||||||||||||| ||||    
T  12006888 atattacatgaacgaaaagaggtatttaccctaa 12006921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 151
Target Start/End: Complemental strand, 20458815 - 20458686
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattac 121  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||| |||| |||||||||         ||||||||||||| || |||| | |||||||||    
T  20458815 tggtggaatgagggaccaaaagtggaagaatctgaaattacagcgacaaaatctaaattttttatttacagggactaaaaccggaattcgttaatattac 20458716  T
Q  122 agggacaaaaagaggtatttactctaaaaa 151  Q
    |||||| |||| | |||||||| |||||||    
T  20458715 agggacgaaaaaatgtatttaccctaaaaa 20458686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 143
Target Start/End: Complemental strand, 38879848 - 38879725
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc--nnnnnnnnacagggactaaaatcgaaatttgctaatatt 119  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||| |||| ||||||||||          ||||| |||||||| | |||| |||||||||    
T  38879848 tggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacaggaactaaaattggaattcgctaatatt 38879749  T
Q  120 acagggacaaaaagaggtatttac 143  Q
    |||||||| |||||||||||||||    
T  38879748 acagggacgaaaagaggtatttac 38879725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 143
Target Start/End: Complemental strand, 23704799 - 23704664
Alignment:
Q  8 agattatactgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaa 107  Q
    ||||| || |||| || ||||| |||||||||| ||||||||||| ||||||||||| |||| ||| ||||||        |||| || ||||| || ||    
T  23704799 agattctattgacttgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatgtaaatcttttttttacagtgagtaaaaccggaa 23704700  T
Q  108 tttgctaatattacagggacaaaaagaggtatttac 143  Q
    || ||||||||||||||||| |||||||||||||||    
T  23704699 ttcgctaatattacagggacgaaaagaggtatttac 23704664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 143
Target Start/End: Original strand, 38879973 - 38880097
Alignment:
Q  17 tgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaat 116  Q
    |||| |||||||| |||||||||| ||||||||||| ||||||||||| |||| |||||||||         | |  |||||||| || |||||||||||    
T  38879973 tgacttggtgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttttttttaaa--gactaaaaccggaatttgctaat 38880070  T
Q  117 attacagggacaaaaagaggtatttac 143  Q
    ||||||||||| |||||||||||||||    
T  38880071 attacagggacgaaaagaggtatttac 38880097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 143
Target Start/End: Complemental strand, 48648399 - 48648264
Alignment:
Q  8 agattatactgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaa 107  Q
    ||||| |||| || ||||| ||||||||||||| | || || ||| ||||||||||| |||| ||||||||||        ||| |||||||||||||||    
T  48648399 agattctacttacgtggtggaatgagggaccaaaaatgaaaaaatctgaaattacagggacaaaatctaaatctttttcttacatggactaaaatcgaaa 48648300  T
Q  108 tttgctaatattacagggacaaaaagaggtatttac 143  Q
    || ||| ||||||||||||| ||||||| |||||||    
T  48648299 ttcgctgatattacagggacgaaaagagatatttac 48648264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 48672536 - 48672655
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgctaatattacag 123  Q
    ||||| |||||||||| ||||||||||| ||||||||||| || | ||||||||||         ||||||||||||| ||||||| |||||||||||||    
T  48672536 tgaaaggagggaccaaaagtggaagaatctgaaattacagggataaaatctaaatctttttatttacagggactaaaaccgaaattcgctaatattacag 48672635  T
Q  124 ggacaaaaagaggtatttac 143  Q
     ||| |||||||||||||||    
T  48672636 agacgaaaagaggtatttac 48672655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 143
Target Start/End: Complemental strand, 20419660 - 20419538
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgctaatatta 120  Q
    ||||| ||||||||||||| | ||||||||| ||||||||||| |||| ||||||||||         ||||||||||||| || |||| ||||||||||    
T  20419660 tggtggaatgagggaccaaaaatggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatatta 20419561  T
Q  121 cagggacaaaaagaggtatttac 143  Q
     |||||| |||||||||||||||    
T  20419560 tagggacgaaaagaggtatttac 20419538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 20419793 - 20419913
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn--acagggactaaaatcgaaatttgctaatattaca 122  Q
    ||||| |||||||||| ||| ||||||| ||||||||||| |||| ||||||||||          ||||||||||||| || |||| | ||||||||||    
T  20419793 tgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaaaccggaattcgttaatattaca 20419892  T
Q  123 gggacaaaaagaggtatttac 143  Q
    |||||||||||||||||||||    
T  20419893 gggacaaaaagaggtatttac 20419913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 143
Target Start/End: Original strand, 20963760 - 20963869
Alignment:
Q  34 ggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattacagggacaaaaag 133  Q
    ||||||| |||| |||||| ||||||||||| |||  |||||||||         ||||||||||||| || |||| |||||||||||||||||||||||    
T  20963760 ggaccaaaagtgaaagaatctgaaattacagggactaaatctaaattttatttttacagggactaaaaccggaattcgctaatattacagggacaaaaag 20963859  T
Q  134 aggtatttac 143  Q
    ||||||||||    
T  20963860 aggtatttac 20963869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 48672409 - 48672274
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc---nnnnnnnnacagggactaaaatcgaaatttgc 112  Q
    ||||| ||||| ||||||||| ||| ||||||||||| |||||||||||||||  ||||||||||           |||| |||||||| |||||||  |    
T  48672409 ctgacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagagacgaaatctaaatctttttttttttacagagactaaaaccgaaattcac 48672310  T
Q  113 taatattacagggacaaaaagaggtatttactctaa 148  Q
    ||||||||||||||| ||||||||||||||| ||||    
T  48672309 taatattacagggacgaaaagaggtatttaccctaa 48672274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 6465984 - 6465857
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    ||||| || ||||| |||||||||| ||||||||||| ||||||||||   |||||||||||||         ||||||||||||| || |||| |||||    
T  6465984 ctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacaagaacataatctaaatattttttttacagggactaaaaccggaattcgctaa 6465885  T
Q  116 tattacagggacaaaaagaggtatttac 143  Q
    ||||||| |||| |||| || |||||||    
T  6465884 tattacatggacgaaaaaagatatttac 6465857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 7658101 - 7657972
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn---acagggactaaaatcgaaatttgc 112  Q
    ||||| || ||||| || ||||||| |||| |||||||||||||||||  |||||||||||||||           ||||||| ||||| ||||||| ||    
T  7658101 ctgacgtgatgaaaggatggaccaaaagtgtaagaatttgaaattacatggacataatctaaatctttttttttttacagggattaaaaccgaaattcgc 7658002  T
Q  113 taatattacagggacaaaaagaggtattta 142  Q
    |||||||||| |||| ||||||||||||||    
T  7658001 taatattacatggacgaaaagaggtattta 7657972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 23383757 - 23383876
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnna-cagggactaaaatcgaaatttgctaatattacag 123  Q
    ||||| ||||||||||  |||||||||| ||||||||||| |||| ||||||||||          ||||||||||||||  ||||  ||||||||||||    
T  23383757 tgaaaggagggaccaaaggtggaagaatatgaaattacagggacaaaatctaaatcttttttttttcagggactaaaatcagaattcactaatattacag 23383856  T
Q  124 ggacaaaaagaggtatttac 143  Q
    |||| |||||||||||||||    
T  23383857 ggacgaaaagaggtatttac 23383876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 144
Target Start/End: Original strand, 48648486 - 48648604
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattacagg 124  Q
    ||||| |||||||||  ||||||||||| | |||||||| ||||| ||||||||||        | || |||||||||||||||| ||||||||||| ||    
T  48648486 tgaaaggagggaccagaagtggaagaatctaaaattacatagacaaaatctaaatcttttttt-atagagactaaaatcgaaattcgctaatattactgg 48648584  T
Q  125 gacaaaaagaggtatttact 144  Q
    ||| |||||| |||||||||    
T  48648585 gacgaaaagaagtatttact 48648604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 143
Target Start/End: Complemental strand, 44816959 - 44816833
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc---nnnnnnnnacagggactaaaatcgaaatttgctaatat 118  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||| |||| |||| |||||           |||| |||||||| ||||||| ||||||||    
T  44816959 tggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatcaaaatctttttttttttacagagactaaaaccgaaattcgctaatat 44816860  T
Q  119 tacagggac--aaaaagaggtatttac 143  Q
    |||||||||   |||||||||||||||    
T  44816859 tacagggacgagaaaagaggtatttac 44816833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 143
Target Start/End: Original strand, 7658287 - 7658341
Alignment:
Q  89 acagggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttac 143  Q
    |||| |||||||| ||||||| | ||||||||||||||| |||||||||||||||    
T  7658287 acagagactaaaaccgaaattcgttaatattacagggacgaaaagaggtatttac 7658341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 24195198 - 24195248
Alignment:
Q  93 ggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttac 143  Q
    |||||||||||  |||| ||||||||||||||||| |||||||||||||||    
T  24195198 ggactaaaatcagaattcgctaatattacagggacgaaaagaggtatttac 24195248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 33162783 - 33162912
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc--nnnnnnnnacagggactaaaatcgaaatttgct 113  Q
    ||||| |||||||||||  ||| || ||||||||||||||||||||||  ||||||||| |||||          | | |||||||||  |||||| |||    
T  33162783 ctgacgtggtgaaatgaaagactaaaagtggaagaatttgaaattacaatgacataatccaaatcttttttttttataaggactaaaacagaaattcgct 33162882  T
Q  114 aatattacagggacaaaaagaggtatttac 143  Q
    |||||||||| ||| |||||||||||||||    
T  33162883 aatattacagagacgaaaagaggtatttac 33162912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 143
Target Start/End: Complemental strand, 41600082 - 41599960
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaat-cnnnnnnnnacagggactaaaatcgaaatttgctaatatta 120  Q
    ||||| ||||||||| |||  |||||||||| ||||||||||| |||| |||||||||          | | ||||||||| ||||||| ||||||||||    
T  41600082 tggtggaatgagggatcaaatgtggaagaatctgaaattacagggacaaaatctaaatatttttttttatatggactaaaaccgaaattcgctaatatta 41599983  T
Q  121 cagggacaaaaagaggtatttac 143  Q
    ||||||  |||||||||||||||    
T  41599982 cagggatgaaaagaggtatttac 41599960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 20458954 - 20459003
Alignment:
Q  31 gagggaccaacagtggaagaatttgaaattacagagacataatctaaatc 80  Q
    |||||||||| ||||||||||| ||||||||||| |||| ||||||||||    
T  20458954 gagggaccaaaagtggaagaatctgaaattacagtgacaaaatctaaatc 20459003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 1250454 - 1250518
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc 80  Q
    ||||| || ||||| |||||||||| ||||||||||| |||||||| || |||| ||||||||||    
T  1250454 ctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattaaagggacaaaatctaaatc 1250518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 24195056 - 24195108
Alignment:
Q  28 aatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc 80  Q
    ||||||||||||| ||||||||||| ||||||||||  |||| ||||||||||    
T  24195056 aatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatc 24195108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 148
Target Start/End: Original strand, 25772588 - 25772712
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc-nnnnnnnnacagggactaaaatcgaaatttgctaatattacag 123  Q
    ||||| |||||||||| ||| ||||||| ||||||||||| |||| ||||||||||         |||||||||||||  | ||||  ||||||||| ||    
T  25772588 tgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaactggaattcactaatattatag 25772687  T
Q  124 ggacaaaaagaggtatttactctaa 148  Q
    |||| ||||||| ||||||| ||||    
T  25772688 ggacgaaaagagatatttaccctaa 25772712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 31851369 - 31851243
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    ||||| |||||||| ||| || ||| ||||||| ||| ||||||||||  |||| |||||||||         ||||| |||||||||||||||  ||||    
T  31851369 ctgacgtggtgaaaagagagatcaaaagtggaaaaatatgaaattacaatgacagaatctaaat-ttttttttacaggaactaaaatcgaaattcactaa 31851271  T
Q  116 tattacagggacaaaaagaggtatttac 143  Q
    ||||| | |||| |||||||||||||||    
T  31851270 tattaaaaggacgaaaagaggtatttac 31851243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 143
Target Start/End: Original strand, 6466127 - 6466181
Alignment:
Q  89 acagggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttac 143  Q
    |||| |||||||| ||||||| |||||||||||||  |||||||||| |||||||    
T  6466127 acagagactaaaaccgaaattcgctaatattacagatacaaaaagagatatttac 6466181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 140
Target Start/End: Original strand, 31852157 - 31852203
Alignment:
Q  94 gactaaaatcgaaatttgctaatattacagggacaaaaagaggtatt 140  Q
    |||||||| ||||||| | ||||||||||||||| ||||||||||||    
T  31852157 gactaaaaccgaaattcgttaatattacagggacgaaaagaggtatt 31852203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 20963613 - 20963561
Alignment:
Q  28 aatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc 80  Q
    ||||||||||||| ||||||||||| | ||||||||| |||  ||||||||||    
T  20963613 aatgagggaccaaaagtggaagaatctaaaattacagggactaaatctaaatc 20963561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 20963650 - 20963686
Alignment:
Q  27 aaatgagggaccaacagtggaagaatttgaaattaca 63  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  20963650 aaatgagggaccaaaagtggaagaatatgaaattaca 20963686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 31851496 - 31851548
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaa 77  Q
    ||||| ||| |||||| ||||||||||| ||||||||||| |||| |||||||    
T  31851496 tgaaaggagagaccaaaagtggaagaatatgaaattacagggacaaaatctaa 31851548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 4e-25; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 156
Target Start/End: Original strand, 16722242 - 16722380
Alignment:
Q  19 acatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgctaata 117  Q
    |||||||| ||| ||||||||| ||||||||||| ||||||||||| |||| ||||||||||         |||||||||||||  |||||| |||||||    
T  16722242 acatggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttgtacagggactaaaactgaaattcgctaata 16722341  T
Q  118 ttacagggacaaaaagaggtatttactctaaaaacaaat 156  Q
    |||||||||| ||||||||||||||| ||||||| ||||    
T  16722342 ttacagggacgaaaagaggtatttaccctaaaaaaaaat 16722380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 14162119 - 14162243
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    ||||| ||||| ||| ||||||||| ||||||||||| ||||||||||  |||| ||||||||||        ||||||||||||| || |||| |||||    
T  14162119 ctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatctcttttttacagggactaaaaccggaattcgctaa 14162218  T
Q  116 tattacagggacaaaaagaggtatt 140  Q
    |||||||||||||||||||||||||    
T  14162219 tattacagggacaaaaagaggtatt 14162243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 4204838 - 4204711
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||        ||||| |||||||  ||||||   |||    
T  4204838 ctgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagggacataatctaaatcttttttttacaggaactaaaactgaaattcattaa 4204739  T
Q  116 tattacagggacaaaaagaggtatttac 143  Q
    |||||||||||| ||||||||| |||||    
T  4204738 tattacagggacgaaaagaggtctttac 4204711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 43572639 - 43572773
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||||||||| |||| |||||||||         ||||| ||||||| || ||||||  ||    
T  43572639 ctgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagggacagaatctaaattttttttttacaggaactaaaaccggaatttgtcaa 43572738  T
Q  116 tattacagggacaaaaagaggtatttactctaaaa 150  Q
    |||||||||||  ||||||||||||||| ||||||    
T  43572739 tattacagggatgaaaagaggtatttaccctaaaa 43572773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 5800735 - 5800607
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgcta 114  Q
    ||||| || ||||| |||||||||| | ||||||||| ||||||||||| |||||||||||||||         ||||||||||||| ||||||| | ||    
T  5800735 ctgacgtgatgaaaggagggaccaaaaatggaagaatatgaaattacagggacataatctaaatccttttttttacagggactaaaaccgaaattcgtta 5800636  T
Q  115 atattacagggacaaaaagaggtatttac 143  Q
    ||||||||||||| |||||||||||||||    
T  5800635 atattacagggacgaaaagaggtatttac 5800607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 143
Target Start/End: Complemental strand, 9267093 - 9266977
Alignment:
Q  28 aatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgctaatattacaggga 126  Q
    ||||||||||||| ||||||||||| ||||||||||| |||| ||||||||||         ||||||||||||| || |||| ||||||||||||||||    
T  9267093 aatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacaggga 9266994  T
Q  127 caaaaagaggtatttac 143  Q
    | |||||||||||||||    
T  9266993 cgaaaagaggtatttac 9266977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 14171716 - 14171589
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    ||||| ||||| ||||||||| ||| ||||||||||||||||||||||| |||| ||||||||||        ||||  | |||||||| |||| |||||    
T  14171716 ctgacgtggtggaatgagggatcaaaagtggaagaatttgaaattacagggacaaaatctaaatcttttttttacagaaattaaaatcggaattcgctaa 14171617  T
Q  116 tattacagggacaaaaagaggtatttac 143  Q
    |||||||||||| ||||| |||||||||    
T  14171616 tattacagggacgaaaagtggtatttac 14171589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 143
Target Start/End: Original strand, 30500279 - 30500416
Alignment:
Q  6 gtagattatactgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcga 105  Q
    ||||||| | ||||| || ||||| |||||||||| ||||||| ||| ||||||||||| |||| |||||||||         |||||||||||||  |     
T  30500279 gtagattttgctgacgtgatgaaaggagggaccaaaagtggaacaatatgaaattacagggacaaaatctaaattttttttttacagggactaaaactgg 30500378  T
Q  106 aatttgctaatattacagggacaaaaagaggtatttac 143  Q
    |||| ||||||||||||||||| |||||||||||||||    
T  30500379 aattcgctaatattacagggacgaaaagaggtatttac 30500416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 151
Target Start/End: Original strand, 14171834 - 14171970
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgcta 114  Q
    ||||| || ||||| || ||||||| |||||||||||  |||||||||| |||| ||||||||||         ||||||||||||| || |||| ||||    
T  14171834 ctgacgtgatgaaaggaaggaccaaaagtggaagaatcagaaattacagggacaaaatctaaatctttttatttacagggactaaaaccggaattcgcta 14171933  T
Q  115 atattacagggacaaaaagaggtatttactctaaaaa 151  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  14171934 atattacagggacgaaaagaggtatttaccctaaaaa 14171970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 30500171 - 30500048
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    ||||| ||||| ||| ||||||||| ||||||||||| ||||||||||| |||| |||||||||         ||||||||||||| ||||||| |||||    
T  30500171 ctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaat-ttttttttacagggactaaaaccgaaattcgctaa 30500073  T
Q  116 tattacagggacaaaaagaggtatt 140  Q
    |||||||||||  ||||||||||||    
T  30500072 tattacagggatgaaaagaggtatt 30500048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 52552822 - 52552681
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn---acagggactaaaatcgaaatttgc 112  Q
    ||||||||||| ||| ||||| ||| ||||||||||| ||||||||||| |||| ||||||||||           |||| |||||||||||||||||||    
T  52552822 ctgacatggtggaataagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatctatttttttttacagagactaaaatcgaaatttgc 52552723  T
Q  113 taatattacagggacaaaaagaggtatttactctaaaaacaa 154  Q
    |||||||| |||||| ||||||| |||| ||  |||||||||    
T  52552722 taatattagagggacgaaaagagatattaaccttaaaaacaa 52552681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 151
Target Start/End: Original strand, 9267232 - 9267358
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattacagg 124  Q
    ||||| |||||||||| ||| ||||||| ||| ||||||| |||| ||||||||          |||||||||||||||| |||| |||||||||||| |    
T  9267232 tgaaaggagggaccaaaagtagaagaatctgatattacagggacaaaatctaaaaaatttatatacagggactaaaatcggaattcgctaatattacaag 9267331  T
Q  125 gacaaaaagaggtatttactctaaaaa 151  Q
    ||| ||||||||||||||| |||||||    
T  9267332 gacgaaaagaggtatttaccctaaaaa 9267358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 143
Target Start/End: Complemental strand, 20853834 - 20853697
Alignment:
Q  8 agattatactgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc--nnnnnnnnacagggactaaaatcga 105  Q
    ||||| |||| || ||||| ||||||||||||| ||||||||||| |||||||| || |||| ||||||||||          ||||||  ||||| |||    
T  20853834 agattctacttacgtggtggaatgagggaccaaaagtggaagaatatgaaattatagggacaaaatctaaatcttttttttttacagggtttaaaaccga 20853735  T
Q  106 aatttgctaatattacagggacaaaaagaggtatttac 143  Q
    |||| ||||||||||||||||| |||||||||||||||    
T  20853734 aattcgctaatattacagggacgaaaagaggtatttac 20853697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 151
Target Start/End: Complemental strand, 35995802 - 35995672
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgctaatatta 120  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||| |||| ||||||||           ||||||||||||| || |||| ||||||||||    
T  35995802 tggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaaaaaaaaattctacagggactaaaaccggaattcgctaatatta 35995703  T
Q  121 cagggacaaaaagaggtatttactctaaaaa 151  Q
    |||| || ||||||||||||||| |||||||    
T  35995702 caggaacgaaaagaggtatttaccctaaaaa 35995672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 150
Target Start/End: Original strand, 21633150 - 21633279
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc-nnnnnnnnacagggactaaaatcgaaatttgctaatatta 120  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||| |||| ||||||||||         | |||||||||||  |||||| ||||||||||    
T  21633150 tggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttatagggactaaaactgaaattcgctaatatta 21633249  T
Q  121 cagggacaaaaagaggtatttactctaaaa 150  Q
    ||||||| | || |||||||||| ||||||    
T  21633250 cagggacgagaataggtatttaccctaaaa 21633279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 149
Target Start/End: Complemental strand, 43572510 - 43572385
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgctaatattacag 123  Q
    ||||| |||||||||| ||||||||||| ||||||||||| |||| |||||||||          ||||||||||||| ||||||| |||||||||||||    
T  43572510 tgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatttttctttttacagggactaaaaccgaaattcgctaatattacag 43572411  T
Q  124 ggacaaaaagaggtatttactctaaa 149  Q
    | || |||||| |||||||| |||||    
T  43572410 gaacgaaaagatgtatttaccctaaa 43572385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 14262284 - 14262412
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgcta 114  Q
    ||||| || ||||| ||||||| || ||||||| ||| ||||||||||| |||| ||||||||||         ||||||||||||| || |||| ||||    
T  14262284 ctgacgtgatgaaaggagggactaaaagtggaacaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgcta 14262383  T
Q  115 atattacagggacaaaaagaggtatttac 143  Q
    ||||||||||||| |||||||||||||||    
T  14262384 atattacagggacgaaaagaggtatttac 14262412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 159
Target Start/End: Original strand, 20853936 - 20854086
Alignment:
Q  8 agattatactgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc-nnnnnnnnacagggactaaaatcgaa 106  Q
    |||||||  |||| || ||||| |||||||||| ||||||||||| ||||||||||| |||| ||||||||||         ||| ||||||||| ||||    
T  20853936 agattatgttgacttgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttaca-ggactaaaaccgaa 20854034  T
Q  107 atttgctaatattacagggacaaaaagaggtatttactctaaaaacaaatata 159  Q
    ||| |||||||||||| |||| ||||||| ||||||| || ||||||||||||    
T  20854035 attcgctaatattacatggacgaaaagagatatttaccct-aaaacaaatata 20854086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 33372653 - 33372780
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnna-cagggactaaaatcgaaatttgcta 114  Q
    ||||| ||||| |||| |||| ||| ||||||||||| ||||||||||| |||| ||||||||||        | |||| ||||||||||||||| ||||    
T  33372653 ctgacgtggtggaatg-gggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttaacaggaactaaaatcgaaattcgcta 33372751  T
Q  115 atattacagggacaaaaagaggtatttac 143  Q
    ||||||| ||||| |||||||||||||||    
T  33372752 atattacggggacgaaaagaggtatttac 33372780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 143
Target Start/End: Original strand, 49986782 - 49986904
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaat--cnnnnnnnnacagggactaaaatcgaaatttgctaatatt 119  Q
    ||||| ||||||||||||| ||||||||||| |||||||||| ||||| |||||||||  |        ||||| ||||||| ||||||| |||||||||    
T  49986782 tggtggaatgagggaccaaaagtggaagaatatgaaattaca-agacaaaatctaaatttcttttttttacaggaactaaaaccgaaattcgctaatatt 49986880  T
Q  120 acagggacaaaaagaggtatttac 143  Q
    || ||||| |||||||||||||||    
T  49986881 actgggacgaaaagaggtatttac 49986904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 45003750 - 45003876
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattac 121  Q
    ||||| ||||||||||||| ||||||||||| |||||||| || |||  ||||||||||        ||||| ||||||| ||||||| |||||||||||    
T  45003750 tggtggaatgagggaccaaaagtggaagaatatgaaattatagggactaaatctaaatcttttttttacaggaactaaaaccgaaattcgctaatattac 45003849  T
Q  122 agggacaaaaagaggtatttactctaa 148  Q
    |||||| ||| ||  ||||||| ||||    
T  45003850 agggacgaaacgatatatttaccctaa 45003876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 14162001 - 14161937
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc 80  Q
    ||||| || ||||| |||||||||| ||||||||||| ||||||||||| |||||||||||||||    
T  14162001 ctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacataatctaaatc 14161937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 143
Target Start/End: Complemental strand, 19112889 - 19112766
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn--acagggactaaaatcgaaatttgctaatatt 119  Q
    ||||| ||| ||||||||| ||||||||||| ||||||| ||| |||| ||||||||||          ||||||||||||| || |||| |||||||||    
T  19112889 tggtggaataagggaccaaaagtggaagaatatgaaattccagggacaaaatctaaatcttttttttttacagggactaaaaccggaattcgctaatatt 19112790  T
Q  120 acagggacaaaaagaggtatttac 143  Q
    ||| |||| |||||||||||||||    
T  19112789 acatggacgaaaagaggtatttac 19112766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 151
Target Start/End: Complemental strand, 33372536 - 33372400
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc-nnnnnnnnacagggactaaaatcgaaatttgcta 114  Q
    ||||| || ||||| |||||||||| ||||||| ||| ||||||||||| |||| ||||||||||         ||||| ||||||| |  |||| ||||    
T  33372536 ctgacgtgatgaaaggagggaccaaaagtggaataatctgaaattacagggacaaaatctaaatctttttatttacaggaactaaaaccagaattcgcta 33372437  T
Q  115 atattacagggacaaaaagaggtatttactctaaaaa 151  Q
    ||||||||||||| ||||||| ||||||| |||||||    
T  33372436 atattacagggacgaaaagagatatttaccctaaaaa 33372400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 143
Target Start/End: Original strand, 45970169 - 45970292
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn--acagggactaaaatcgaaatttgctaatatt 119  Q
    ||||| |||| || ||||| ||||||||||| ||||||||||| |||| ||| ||||||          ||||||||||||| |||||||  ||||||||    
T  45970169 tggtggaatggggaaccaaaagtggaagaatctgaaattacagggacaaaatttaaatcttttttttttacagggactaaaaccgaaattcactaatatt 45970268  T
Q  120 acagggacaaaaagaggtatttac 143  Q
    |||||||| |||||||||||||||    
T  45970269 acagggacgaaaagaggtatttac 45970292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 52552936 - 52553000
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc 80  Q
    ||||| || ||||| |||||||||| ||||||||||| |||||||||||||||| ||||||||||    
T  52552936 ctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagagacaaaatctaaatc 52553000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 140
Target Start/End: Complemental strand, 27946165 - 27946114
Alignment:
Q  89 acagggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatt 140  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||||||||||    
T  27946165 acagggactaaaaccgaaattcgctaatattacagggacgaaaagaggtatt 27946114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 143
Target Start/End: Original strand, 35995942 - 35996051
Alignment:
Q  32 agggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattacagggacaaaa 131  Q
    ||||||||| ||||||||||| ||||||||| |||||| | ||||| |         |||||||||||||||| |||| ||||||||||||||||| |||    
T  35995942 agggaccaaaagtggaagaatctgaaattactgagacaaattctaatt--tttttttacagggactaaaatcggaattcgctaatattacagggacgaaa 35996039  T
Q  132 agaggtatttac 143  Q
    ||| ||||||||    
T  35996040 agatgtatttac 35996051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 45970036 - 45969917
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgctaatattacag 123  Q
    ||||| ||| |||||| |||| |||||| ||||||||||| |||| ||||||||||         ||||||||||||| || ||||  ||||||||||||    
T  45970036 tgaaaggagagaccaaaagtgaaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcactaatattacag 45969937  T
Q  124 ggacaaaaagaggtatttac 143  Q
    |||| |||||||||||||||    
T  45969936 ggacgaaaagaggtatttac 45969917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 143
Target Start/End: Complemental strand, 15328519 - 15328465
Alignment:
Q  89 acagggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttac 143  Q
    ||||||||||||| |||||||| ||||||||||||| || |||||||||||||||    
T  15328519 acagggactaaaaacgaaatttactaatattacaggaacgaaaagaggtatttac 15328465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 143
Target Start/End: Complemental strand, 16722105 - 16721993
Alignment:
Q  32 agggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgctaatattacagggacaaa 130  Q
    ||||||||| ||||||||||| ||||||||||  |||| |||||||||          |||| |||||||| || |||| ||||||||||||||||| ||    
T  16722105 agggaccaaaagtggaagaatctgaaattacatggacaaaatctaaatttttttttttacagtgactaaaaccggaattcgctaatattacagggacgaa 16722006  T
Q  131 aagaggtatttac 143  Q
    |||||||||||||    
T  16722005 aagaggtatttac 16721993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 5800859 - 5800977
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc-nnnnnnnnacagggactaaaatcgaaatttgctaatatta 120  Q
    ||||| ||| ||||||||| ||||||||||| ||||||||||  |||| ||||||||||         ||||||||| ||| || |||| ||||||||||    
T  5800859 tggtggaataagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacagggact-aaaccggaattcgctaatatta 5800957  T
Q  121 cagggacaaaaagaggtatt 140  Q
    ||||||| ||||||||||||    
T  5800958 cagggacgaaaagaggtatt 5800977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 11003853 - 11003734
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgctaatattacag 123  Q
    ||||| || ||||||| ||||||||||| ||||||||||  |||| ||||||| ||         ||||||||||||| || |||| | ||||||||||     
T  11003853 tgaaaggatggaccaaaagtggaagaatctgaaattacaaggacaaaatctaagtctttttatttacagggactaaaaccggaattcggtaatattacaa 11003754  T
Q  124 ggacaaaaagaggtatttac 143  Q
    ||||||||||||||||||||    
T  11003753 ggacaaaaagaggtatttac 11003734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 14262160 - 14262041
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaat-cnnnnnnnnacagggactaaaatcgaaatttgctaatatta 120  Q
    ||||| ||| ||||||||| ||||||||||| ||||||||||| |||| |||||||||          ||| ||||||||| || |||| ||||||||||    
T  14262160 tggtggaataagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatatttttttttacaaggactaaaaccggaattcgctaatatta 14262061  T
Q  121 cagggacaaaaagaggtatt 140  Q
    ||||||| ||||||| ||||    
T  14262060 cagggacgaaaagagatatt 14262041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 19113022 - 19113141
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgctaatattacag 123  Q
    ||||| |||||||||| ||| ||||||| ||||||||||| || | ||||||||||         ||||||||||||| || |||| | |||||||| ||    
T  19113022 tgaaaggagggaccaaaagtagaagaatctgaaattacagggataaaatctaaatctttttttttacagggactaaaaccggaattcgttaatattatag 19113121  T
Q  124 ggacaaaaagaggtatttac 143  Q
    |||| |||||||||||||||    
T  19113122 ggacgaaaagaggtatttac 19113141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 133
Target Start/End: Original strand, 36990922 - 36991025
Alignment:
Q  30 tgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattacagggacaa 129  Q
    |||||||| || ||||||||||| | ||||||||| |||| ||||||||          ||||||||||||| ||||||| ||||||||||||||||| |    
T  36990922 tgagggactaaaagtggaagaatctaaaattacagggacagaatctaaactttttttttacagggactaaaaccgaaattcgctaatattacagggacca 36991021  T
Q  130 aaag 133  Q
    ||||    
T  36991022 aaag 36991025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 133
Target Start/End: Original strand, 37016362 - 37016465
Alignment:
Q  30 tgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattacagggacaa 129  Q
    |||||||| || ||||||||||| | ||||||||| |||| ||||||||          ||||||||||||| ||||||| ||||||||||||||||| |    
T  37016362 tgagggactaaaagtggaagaatctaaaattacagggacagaatctaaactttttttttacagggactaaaaccgaaattcgctaatattacagggacca 37016461  T
Q  130 aaag 133  Q
    ||||    
T  37016462 aaag 37016465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 45003617 - 45003498
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc-nnnnnnnnacagggactaaaatcgaaatttgctaatattacag 123  Q
    ||||| ||||||| || ||||||||||| ||||||||||| |||| ||||||||||         | ||||||| ||| || |||||||||||||||| |    
T  45003617 tgaaaggagggacaaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttattttatagggactgaaaccggaatttgctaatattacgg 45003518  T
Q  124 ggacaaaaagaggtatttac 143  Q
    |||| ||||||| |||||||    
T  45003517 ggacgaaaagagatatttac 45003498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 149
Target Start/End: Complemental strand, 49986649 - 49986523
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn--acagggactaaaatcgaaatttgctaatattaca 122  Q
    ||||| ||| |||||| ||| ||||||| ||||||||||| |||| ||||||||||          |||| |||||||| || ||||  |||||||||||    
T  49986649 tgaaaggagagaccaaaagtagaagaatctgaaattacagggacaaaatctaaatcttttttttttacagtgactaaaaccggaattctctaatattaca 49986550  T
Q  123 gggacaaaaagaggtatttactctaaa 149  Q
    ||||| ||||||||||||||| |||||    
T  49986549 gggacgaaaagaggtatttaccctaaa 49986523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 143
Target Start/End: Complemental strand, 19720389 - 19720335
Alignment:
Q  89 acagggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttac 143  Q
    ||||||||||||| || |||| ||||||||||||||||| ||||||| |||||||    
T  19720389 acagggactaaaaccggaattcgctaatattacagggacgaaaagagatatttac 19720335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 143
Target Start/End: Original strand, 27946187 - 27946241
Alignment:
Q  89 acagggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttac 143  Q
    ||||||||||||| || |||| ||||||||||| ||||| |||||||||||||||    
T  27946187 acagggactaaaaccggaattcgctaatattactgggacgaaaagaggtatttac 27946241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 17465423 - 17465362
Alignment:
Q  89 acagggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttactctaaaa 150  Q
    ||||| |||||||||  |||| |||||||||| | |||||||||||||||||||| ||||||    
T  17465423 acaggtactaaaatcagaattcgctaatattaaaaggacaaaaagaggtatttaccctaaaa 17465362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 45058742 - 45058803
Alignment:
Q  19 acatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc 80  Q
    |||||||| ||| ||||| ||| | ||||||||| |||||||||||||||| ||||||||||    
T  45058742 acatggtggaataagggatcaaaaatggaagaatctgaaattacagagacaaaatctaaatc 45058803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 15328708 - 15328772
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc 80  Q
    ||||| ||||| ||| ||||||||| ||||||| ||| ||||||||||| |||| ||||||||||    
T  15328708 ctgacgtggtggaataagggaccaaaagtggaaaaatctgaaattacagggacaaaatctaaatc 15328772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 35740931 - 35740829
Alignment:
Q  30 tgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattacagggacaa 129  Q
    |||||||| || ||||||||||||| ||||||||| |||| |||||||| |        || |||||||||| || |||| ||||||||||||||||| |    
T  35740931 tgagggactaaaagtggaagaatttaaaattacagggacaaaatctaaa-cttttttttacggggactaaaaccggaattcgctaatattacagggacca 35740833  T
Q  130 aaag 133  Q
    ||||    
T  35740832 aaag 35740829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 143
Target Start/End: Complemental strand, 21632941 - 21632903
Alignment:
Q  105 aaatttgctaatattacagggacaaaaagaggtatttac 143  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  21632941 aaattcgctaatattacagggacgaaaagaggtatttac 21632903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 32998382 - 32998444
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaa 78  Q
    |||||||||| ||| ||||||| || |||||| |||| ||||||||||| |||| ||||||||    
T  32998382 ctgacatggttaaacgagggactaaaagtggaggaatctgaaattacagggacagaatctaaa 32998444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 14262191 - 14262228
Alignment:
Q  27 aaatgagggaccaacagtggaagaatttgaaattacag 64  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  14262191 aaatgagggaccaaaagtggaggaatttgaaattacag 14262228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 140
Target Start/End: Original strand, 3425973 - 3426021
Alignment:
Q  92 gggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatt 140  Q
    |||||||||| || |||| ||||||||||||||| | ||||||||||||    
T  3425973 gggactaaaaccggaattcgctaatattacaggggccaaaagaggtatt 3426021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 38283773 - 38283737
Alignment:
Q  27 aaatgagggaccaacagtggaagaatttgaaattaca 63  Q
    |||||||||||||| |||||| |||||||||||||||    
T  38283773 aaatgagggaccaaaagtggaggaatttgaaattaca 38283737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 62440 - 62344
Alignment:
Q  146 taaaaacaaatataataatttttgaagttttcatccatttattacacgttttaaataa-cagtacctaaaaattacttcaaatgattttctataact 241  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||| || | ||||| || || ||||||| ||||||||||||||||||||||||    
T  62440 taaaaacaaatataataatttttgaacttttcatccatttgttacacattattaataatcaatatctaaaaactacttcaaatgattttctataact 62344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 7e-24; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 22 - 143
Target Start/End: Complemental strand, 31090185 - 31090062
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn--acagggactaaaatcgaaatttgctaatatt 119  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||| |||| ||||||||||          |||||||||||||||||||||  ||||||||    
T  31090185 tggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacagggactaaaatcgaaattcactaatatt 31090086  T
Q  120 acagggacaaaaagaggtatttac 143  Q
    ||||||||||||||| ||||||||    
T  31090085 acagggacaaaaagaagtatttac 31090062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 143
Target Start/End: Original strand, 3273860 - 3273994
Alignment:
Q  8 agattatactgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaa 107  Q
    ||||| ||||||| ||||||||||||||| ||| ||||||||||| ||||||||||| || | ||||||||||        | ||||||||||| |||||    
T  3273860 agattctactgacgtggtgaaatgagggatcaaaagtggaagaatctgaaattacagggataaaatctaaatcttttttttatagggactaaaaccgaaa 3273959  T
Q  108 tttgctaatattacagggacaaaaagaggtatttac 143  Q
    || ||||||||||| ||||| |||||||||||||||    
T  3273960 ttcgctaatattac-gggacgaaaagaggtatttac 3273994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 38574098 - 38573971
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    ||||| ||||| ||||||||||||| ||||||||||| ||||||||||| |||| ||||||||||        ||||||| |||||||| ||||  ||||    
T  38574098 ctgacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacagggattaaaatcggaattcactaa 38573999  T
Q  116 tattacagggacaaaaagaggtatttac 143  Q
    ||||||| |||| |||||||||||||||    
T  38573998 tattacatggacgaaaagaggtatttac 38573971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 150
Target Start/End: Original strand, 9396959 - 9397081
Alignment:
Q  28 aatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattacagggac 127  Q
    ||||| || |||| ||||||||||| ||||||||||| |||| ||||||||||        ||||||||||||| || ||||||||||||||||||||||    
T  9396959 aatgatggtccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttacagggactaaaaccggaatttgctaatattacagggac 9397058  T
Q  128 aaaaagaggtatttactctaaaa 150  Q
     |||||| |||||||| ||||||    
T  9397059 gaaaagaagtatttaccctaaaa 9397081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 48259991 - 48260128
Alignment:
Q  8 agattatactgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaa 107  Q
    ||||||| ||||| || || |||||| || ||| ||||||||||||||||||||||| |||| ||||||||||        |||| || ||||||| |||    
T  48259991 agattatgctgacgtgatggaatgagcgatcaaaagtggaagaatttgaaattacagggacaaaatctaaatcttttttttacagagattaaaatcaaaa 48260090  T
Q  108 tttgctaatattacagggacaaaaagaggtatttactc 145  Q
    || ||||||||||||||||| ||||||| |||||||||    
T  48260091 ttcgctaatattacagggacgaaaagagatatttactc 48260128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 9396829 - 9396702
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnna-cagggactaaaatcgaaatttgcta 114  Q
    ||||| || ||||| |||||||||| ||||||| |||||||||||| || |||| ||||||||||        | ||| |||||||||||||||| ||||    
T  9396829 ctgacgtgatgaaaggagggaccaaaagtggaaaaatttgaaattatagggacaaaatctaaatcttttttttaacagagactaaaatcgaaattcgcta 9396730  T
Q  115 atattacagggacaaaaagaggtattta 142  Q
    ||||||||||||| ||||||||||||||    
T  9396729 atattacagggacgaaaagaggtattta 9396702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 32 - 143
Target Start/End: Original strand, 13132205 - 13132315
Alignment:
Q  32 agggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattacagggacaaaa 131  Q
    ||||||||| ||||||||||| ||||||||||| |||| ||||||||||        ||||| ||||||||||||||| ||||||||||||||||| |||    
T  13132205 agggaccaaaagtggaagaatatgaaattacagggacagaatctaaatcttttttttacagg-actaaaatcgaaattcgctaatattacagggacgaaa 13132303  T
Q  132 agaggtatttac 143  Q
    | ||||||||||    
T  13132304 ataggtatttac 13132315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 35376376 - 35376502
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    ||||| ||||| ||||||||||||| ||||||||| | ||||||||||| |||| ||| ||||||        |||||||||||||  | ||||||||||    
T  35376376 ctgacgtggtggaatgagggaccaaaagtggaagattctgaaattacagggacaaaatttaaatcttttttttacagggactaaaactggaatttgctaa 35376475  T
Q  116 tattacagggacaaaaagaggtattta 142  Q
    |||||||||||| ||||||| ||||||    
T  35376476 tattacagggacgaaaagagatattta 35376502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 148
Target Start/End: Complemental strand, 9619101 - 9618977
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgctaatattacag 123  Q
    ||||| |||||||||| ||||||||||| ||||||||||| |||| ||||||||||         ||||||||||||| || |||| ||||||||||||     
T  9619101 tgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttgtttttacagggactaaaaccggaattcgctaatattacat 9619002  T
Q  124 ggacaaaaagaggtatttactctaa 148  Q
    |||| |||| |||||||||||||||    
T  9619001 ggacgaaaataggtatttactctaa 9618977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 35376292 - 35376165
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    ||||| || ||||| ||| |||||| ||||||||||| | |||||||||||||| ||||||||||        ||||||||||||| |  |||| |||||    
T  35376292 ctgacgtgatgaaaggagagaccaaaagtggaagaatctaaaattacagagacaaaatctaaatcttttttttacagggactaaaaccagaattcgctaa 35376193  T
Q  116 tattacagggacaaaaagaggtatttac 143  Q
    |||||||||||| |||| ||||||||||    
T  35376192 tattacagggacgaaaataggtatttac 35376165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 143
Target Start/End: Original strand, 9619233 - 9619355
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgctaatatta 120  Q
    ||||| ||||| ||||||| ||||||||||| ||||||||||  |||| ||||||||||         ||||||||||||| |  |||| ||||||||||    
T  9619233 tggtggaatgaaggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttctacagggactaaaaccagaattcgctaatatta 9619332  T
Q  121 cagggacaaaaagaggtatttac 143  Q
    |||||||||||||||||||||||    
T  9619333 cagggacaaaaagaggtatttac 9619355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 143
Target Start/End: Original strand, 31090299 - 31090437
Alignment:
Q  6 gtagattatactgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcg 104  Q
    ||||||| || |||| || ||||| |||||||||| ||| ||||||| ||||||||||| |||| ||||||| |          ||||||||||||||||    
T  31090299 gtagattctattgacttgatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaattttttttttttacagggactaaaatcg 31090398  T
Q  105 aaatttgctaatattacagggacaaaaagaggtatttac 143  Q
    ||||| ||||||||||||||||| ||||||| |||||||    
T  31090399 aaattcgctaatattacagggacgaaaagagatatttac 31090437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 143
Target Start/End: Complemental strand, 34064106 - 34063984
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc-nnnnnnnnacagggactaaaatcgaaatttgctaatatta 120  Q
    ||||| ||||||||||||| ||||||||||| |||||||||||||||| ||||||||||         |||||||||||||    |||| | ||||||||    
T  34064106 tggtggaatgagggaccaaaagtggaagaatctgaaattacagagacaaaatctaaatctttttttttacagggactaaaactagaattcgttaatatta 34064007  T
Q  121 cagggacaaaaagaggtatttac 143  Q
    ||||||| |||||||||||||||    
T  34064006 cagggacgaaaagaggtatttac 34063984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 3018142 - 3018014
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc--nnnnnnnnacagggactaaaatcgaaatttgct 113  Q
    ||||| || ||||| |||||||||| ||||||||||| ||||||||||| |||| ||||||||||          || |||||||||| || |||| |||    
T  3018142 ctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttaccgggactaaaaccggaattcgct 3018043  T
Q  114 aatattacagggacaaaaagaggtattta 142  Q
    |||||||||||||| ||||||||||||||    
T  3018042 aatattacagggacgaaaagaggtattta 3018014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 3018252 - 3018383
Alignment:
Q  8 agattatactgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaa 107  Q
    ||||||| ||||| ||||| ||| ||||||||| ||||| ||||| ||||||||||  |||| ||||||||||        ||||||||||||| |||||    
T  3018252 agattatgctgacgtggtggaataagggaccaaaagtggtagaatctgaaattacacggaca-aatctaaatcttttttttacagggactaaaaccgaaa 3018350  T
Q  108 tttgctaatattacagggacaaaaagaggtatt 140  Q
    || | ||||||||||||||| ||||||| ||||    
T  3018351 ttcgttaatattacagggacgaaaagagatatt 3018383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 4356129 - 4356253
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    ||||| ||||| ||| ||||||||| |||||||||||||||||||||||||||| |||| || |         |||| || ||||| ||||||| |||||    
T  4356129 ctgacgtggtggaataagggaccaaaagtggaagaatttgaaattacagagacaaaatcaaattttttttattacagagattaaaaccgaaattcgctaa 4356228  T
Q  116 tattacagggacaaaaagaggtatt 140  Q
    |||||||||||  ||||||||||||    
T  4356229 tattacagggatgaaaagaggtatt 4356253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 137
Target Start/End: Complemental strand, 15640836 - 15640724
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattacagg 124  Q
    ||||| |||||||||| |||| |||||| ||||||||||| |||| ||||||||||        ||||| ||||||| || |||| ||||||||||||||    
T  15640836 tgaaaggagggaccaaaagtgaaagaatatgaaattacagggacaaaatctaaatcttttttttacaggaactaaaaccggaattcgctaatattacagg 15640737  T
Q  125 gacaaaaagaggt 137  Q
    ||| |||||||||    
T  15640736 gacgaaaagaggt 15640724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 15640963 - 15641027
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc 80  Q
    ||||| ||||||||||||| ||||| ||||||||||| ||||||||||| |||||||||||||||    
T  15640963 ctgacgtggtgaaatgaggaaccaaaagtggaagaatctgaaattacagggacataatctaaatc 15641027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 9516867 - 9516986
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgctaatattacag 123  Q
    ||||| |||||||||| ||| ||||||| ||||||||||| |||| ||||||||||         |||| |||||||| ||||||| |||||||||||||    
T  9516867 tgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaaatctttttttttacagagactaaaaccgaaattcgctaatattacag 9516966  T
Q  124 ggacaaaaagaggtatttac 143  Q
    |||| ||||||| |||||||    
T  9516967 ggacgaaaagagatatttac 9516986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 143
Target Start/End: Complemental strand, 46046562 - 46046432
Alignment:
Q  8 agattatactgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaa 107  Q
    ||||| |||| || ||||| ||||||||| ||| ||||||||||| ||||||||||| |||| ||||||  |         |||||||||||||||| ||    
T  46046562 agattctactaacgtggtggaatgagggatcaaaagtggaagaatatgaaattacagggacaaaatctattt-----ttttacagggactaaaatcggaa 46046468  T
Q  108 tttgctaatattacagggacaaaaagaggtatttac 143  Q
    || ||||||||||||||||| |||| ||||||||||    
T  46046467 ttcgctaatattacagggacgaaaaaaggtatttac 46046432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 143
Target Start/End: Complemental strand, 9516734 - 9516612
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc-nnnnnnnnacagggactaaaatcgaaatttgctaatatta 120  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||  |||| ||||||||||         ||| ||||||||| || |||| ||||||||||    
T  9516734 tggtggaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacaaggactaaaaccggaattcgctaatatta 9516635  T
Q  121 cagggacaaaaagaggtatttac 143  Q
    ||||||| ||||||| |||||||    
T  9516634 cagggacgaaaagagatatttac 9516612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 38574225 - 38574343
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc-nnnnnnnnacagggactaaaatcgaaatttgctaatattacag 123  Q
    ||||| |||||||||| ||||||||||| ||||||||||| |||| ||||||||||         ||||||||||||| |  |||| |||||||||||||    
T  38574225 tgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccagaattcgctaatattacag 38574324  T
Q  124 ggacaaaaagaggtattta 142  Q
    |||| |||| |||||||||    
T  38574325 ggacgaaaaaaggtattta 38574343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 13132071 - 13131943
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc--nnnnnnnnacagggactaaaatcgaaatttgct 113  Q
    ||||| ||||||||||||||| ||| ||||||||||| ||||||||||   ||||||||||||||          |||||||||||||  |||||| | |    
T  13132071 ctgacgtggtgaaatgagggatcaaaagtggaagaatctgaaattacatgaacataatctaaatcttttttttttacagggactaaaacagaaattcgtt 13131972  T
Q  114 aatattacagggacaaaaagaggtattta 142  Q
    ||||||||| |||| ||||||||||||||    
T  13131971 aatattacaaggacgaaaagaggtattta 13131943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 46046672 - 46046799
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc-nnnnnnnnacagggactaaaatcgaaatttgcta 114  Q
    ||||| || ||||| |||||| ||| ||||||||||| ||||||||||| |||| ||||||||||         ||||||||||||| || |||| ||||    
T  46046672 ctgacgtgatgaaaggagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccggaattcgcta 46046771  T
Q  115 atattacagggacaaaaagaggtatttac 143  Q
    ||||||||||||| |||| ||||||||||    
T  46046772 atattacagggacgaaaa-aggtatttac 46046799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 148
Target Start/End: Complemental strand, 3273760 - 3273618
Alignment:
Q  8 agattatactgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatcta--aatcnnnnnnnnacagggactaaaatcga 105  Q
    ||||| || |||| || ||||| |||||||||| ||||||||||| ||||||||||| |||| ||||||  ||          || |||||||||||||     
T  3273760 agattctaatgacttgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctataaaaaaaaaaattacggggactaaaatcgg 3273661  T
Q  106 aatttgctaatattacagggacaaaaagaggtatttactctaa 148  Q
    |||| ||||||||||||||||| ||||||| ||||||| ||||    
T  3273660 aattcgctaatattacagggacgaaaagagatatttaccctaa 3273618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 4356002 - 4355887
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattacagg 124  Q
    |||||||||||||||| |||| |||||| |||||||||| ||||| |||||||| |        ||||| ||||||| || |||| |||||||||| | |    
T  4356002 tgaaatgagggaccaaaagtgaaagaatatgaaattacatagacaaaatctaaagcttgtttttacaggaactaaaaccggaattcgctaatattatatg 4355903  T
Q  125 gacaaaaagaggtatt 140  Q
     |||||||||||||||    
T  4355902 aacaaaaagaggtatt 4355887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 140
Target Start/End: Original strand, 18713198 - 18713335
Alignment:
Q  6 gtagattatactgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagg---gactaaaat 102  Q
    ||||||| | ||||| ||||| ||| ||||||||| | ||||||||| |||||||||||||||| ||||||||||        |||||   ||||||||     
T  18713198 gtagattctgctgacgtggtggaataagggaccaaaactggaagaatctgaaattacagagacaaaatctaaatcttttttttacagggacgactaaaac 18713297  T
Q  103 cgaaatttgctaatattacagggacaaaaagaggtatt 140  Q
    ||||| | ||||||| |||||| || ||||||||||||    
T  18713298 cgaaactcgctaataatacaggtacgaaaagaggtatt 18713335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 37012955 - 37013082
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    ||||| || ||||| ||| |||||| ||||||||||| ||||||||||| |||| ||||||| |         ||||||||||||| |  |||| |||||    
T  37012955 ctgacgtgatgaaaggagtgaccaaaagtggaagaatatgaaattacagggacaaaatctaatttttttttatacagggactaaaaccagaattcgctaa 37013054  T
Q  116 tattacagggacaaaaagaggtatttac 143  Q
    |||||||||||| ||| |||||||||||    
T  37013055 tattacagggacgaaatgaggtatttac 37013082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 143
Target Start/End: Original strand, 31218303 - 31218357
Alignment:
Q  89 acagggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttac 143  Q
    ||||||||||||| || |||| ||||||||||||||||| |||||||||||||||    
T  31218303 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttac 31218357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 143
Target Start/End: Complemental strand, 12904870 - 12904749
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattac 121  Q
    ||||| |||||| |||||| ||||||||||| |||||||| |  |||| |||||||||         ||||||||||||| | ||||| ||||||||||     
T  12904870 tggtggaatgagagaccaaaagtggaagaatctgaaattataaggacaaaatctaaattttttttttacagggactaaaaccaaaattcgctaatattat 12904771  T
Q  122 agggacaaaaagaggtatttac 143  Q
    |||||| ||||||| |||||||    
T  12904770 agggacgaaaagagatatttac 12904749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 143
Target Start/End: Original strand, 26252497 - 26252613
Alignment:
Q  28 aatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc-nnnnnnnnacagggactaaaatcgaaatttgctaatattacaggga 126  Q
    |||| |||||||| ||||||||||| ||||||||||| |||| ||||||||||         ||||| |||||||  | |||| ||||||||||||||||    
T  26252497 aatgggggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacaggaactaaaactggaattcgctaatattacaggga 26252596  T
Q  127 caaaaagaggtatttac 143  Q
    | ||||||| |||||||    
T  26252597 cgaaaagagatatttac 26252613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 34064246 - 34064294
Alignment:
Q  32 agggaccaacagtggaagaatttgaaattacagagacataatctaaatc 80  Q
    ||||||||| ||||||||||| |||||||||||||||| ||||||||||    
T  34064246 agggaccaaaagtggaagaatctgaaattacagagacaaaatctaaatc 34064294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 37012837 - 37012773
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc 80  Q
    ||||| ||||| ||| ||||||||| ||||||||||| ||||||||||| |||| ||||||||||    
T  37012837 ctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 37012773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 149
Target Start/End: Complemental strand, 31944071 - 31943946
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc--nnnnnnnnacagggactaaaatcgaaatttgctaatattaca 122  Q
    ||||| ||| |||||| ||||||||||| ||||||||||| |||| ||||||||||          ||||| ||||||| || |||| ||||||||||||    
T  31944071 tgaaaggagagaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttatttacaggaactaaaaccggaattcgctaatattaca 31943972  T
Q  123 gggacaaaaagaggtatttactctaaa 149  Q
    ||||| |||||| |||||||| |||||    
T  31943971 gggacgaaaaga-gtatttaccctaaa 31943946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 140
Target Start/End: Complemental strand, 36887736 - 36887685
Alignment:
Q  89 acagggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatt 140  Q
    ||||||||||||| | ||||| ||||||||||||||||| ||||||||||||    
T  36887736 acagggactaaaaccaaaattcgctaatattacagggaccaaaagaggtatt 36887685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 48580006 - 48579871
Alignment:
Q  6 gtagattatactgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc-nnnnnnnnacagggactaaaatcg 104  Q
    ||||||| | ||||| ||||| ||| ||||||||| | || |||||| |||||||||||||||| ||||||||||         |||  |||||||| ||    
T  48580006 gtagattctgctgacgtggtggaataagggaccaaaattgaaagaatctgaaattacagagacaaaatctaaatctttttttttacatagactaaaaccg 48579907  T
Q  105 aaatttgctaatattacagggacaaaaagaggtatt 140  Q
    || || | ||||||||||||||| ||||||||||||    
T  48579906 aacttcgttaatattacagggacgaaaagaggtatt 48579871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 41947180 - 41947230
Alignment:
Q  93 ggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttac 143  Q
    ||||||||| ||||||| ||||||||||||||||| ||||||| |||||||    
T  41947180 ggactaaaaccgaaattcgctaatattacagggacgaaaagagatatttac 41947230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 127
Target Start/End: Complemental strand, 43312265 - 43312227
Alignment:
Q  89 acagggactaaaatcgaaatttgctaatattacagggac 127  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  43312265 acagggactaaaatcggaatttgctaatattacagggac 43312227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 41947020 - 41946967
Alignment:
Q  90 cagggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttac 143  Q
    |||||||||||| || ||||  |||||||||||||||| |||||||||||||||    
T  41947020 cagggactaaaaccggaattcactaatattacagggacgaaaagaggtatttac 41946967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 7819152 - 7819080
Alignment:
Q  8 agattatactgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc 80  Q
    ||||| |||| || || ||||| |||| ||||| ||||||||||| ||||||||||| |||| ||||||||||    
T  7819152 agattttactaacgtgatgaaaggaggaaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 7819080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 7819262 - 7819322
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatcta 76  Q
    ||||| ||||| ||||||||||||| ||||||||||| ||| ||||||| |||| ||||||    
T  7819262 ctgacgtggtggaatgagggaccaaaagtggaagaatctgacattacagggacaaaatcta 7819322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 26252389 - 26252337
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaa 77  Q
    ||||| |||||||||| ||||||||||| ||||||||||| |||| |||||||    
T  26252389 tgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 26252337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 36888928 - 36889051
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    |||||| ||| ||| ||||||| || |||||| |||| ||||||||||| ||||||||||||||         ||| ||||||||| | ||||| |||||    
T  36888928 ctgacaaggttaaacgagggactaaaagtggaggaatctgaaattacagggacataatctaaattttttttttaca-ggactaaaaccaaaattcgctaa 36889026  T
Q  116 tattacagggacaaaaagaggtatt 140  Q
    ||||| |||||| ||||| ||||||    
T  36889027 tattatagggaccaaaagtggtatt 36889051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 143
Target Start/End: Original strand, 31944199 - 31944326
Alignment:
Q  17 tgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgctaa 115  Q
    |||| ||||| |||||||||| || ||||||||||| ||||||||||  |||| ||||||| |          |||| |||||||| ||||||| |||||    
T  31944199 tgacgtggtggaatgagggacaaaaagtggaagaatatgaaattacatggacaaaatctaattatttttttttacagagactaaaaccgaaattcgctaa 31944298  T
Q  116 tattacagggacaaaaagaggtatttac 143  Q
    ||||||| |||| |||||| ||||||||    
T  31944299 tattacaaggacgaaaagaagtatttac 31944326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 48580123 - 48580178
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc 80  Q
    ||||| |||||||||| ||||||| ||| ||||||||||| |||| ||||||||||    
T  48580123 tgaaaggagggaccaaaagtggaacaatatgaaattacagggacaaaatctaaatc 48580178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 140
Target Start/End: Original strand, 46935170 - 46935212
Alignment:
Q  98 aaaatcgaaatttgctaatattacagggacaaaaagaggtatt 140  Q
    |||||||||||| |||||||||| |||||| ||||||||||||    
T  46935170 aaaatcgaaattcgctaatattatagggaccaaaagaggtatt 46935212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 143
Target Start/End: Complemental strand, 48259879 - 48259825
Alignment:
Q  89 acagggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttac 143  Q
    ||||||| ||||| || |||| ||||||||||||||||| ||||||| |||||||    
T  48259879 acagggattaaaaccggaattcgctaatattacagggacgaaaagagatatttac 48259825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 51029095 - 51029141
Alignment:
Q  89 acagggactaaaatcgaaatttgctaatattacagggacaaaaagag 135  Q
    ||||||||||||| ||||||| ||| ||||||||||||| |||||||    
T  51029095 acagggactaaaaccgaaattcgctcatattacagggaccaaaagag 51029141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 38574123 - 38574164
Alignment:
Q  27 aaatgagggaccaacagtggaagaatttgaaattacagagac 68  Q
    |||||||||||||| |||||| |||| |||||||||||||||    
T  38574123 aaatgagggaccaaaagtggaggaatatgaaattacagagac 38574164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 4356104 - 4356068
Alignment:
Q  27 aaatgagggaccaacagtggaagaatttgaaattaca 63  Q
    |||||||||||||| |||||| |||||||||||||||    
T  4356104 aaatgagggaccaaaagtggaggaatttgaaattaca 4356068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 18713090 - 18713026
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc 80  Q
    ||||| || ||||| |||||||||| | ||||| ||| ||||||||||| |||| ||||||||||    
T  18713090 ctgacgtgatgaaaggagggaccaaaattggaacaatatgaaattacagggacaaaatctaaatc 18713026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 37012862 - 37012898
Alignment:
Q  27 aaatgagggaccaacagtggaagaatttgaaattaca 63  Q
    |||||||||||||| |||||| |||||||||||||||    
T  37012862 aaatgagggaccaaaagtggaggaatttgaaattaca 37012898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 7e-24; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 20995916 - 20996040
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    ||||| ||||| ||| ||||||||| ||||||||||| |||||||||||||||| ||||||||||        ||| |||||||||   ||||| |||||    
T  20995916 ctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagagacaaaatctaaatcttttttttacatggactaaaactaaaattcgctaa 20996015  T
Q  116 tattacagggacaaaaagaggtatt 140  Q
    |||||||||||||||||||||||||    
T  20996016 tattacagggacaaaaagaggtatt 20996040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 143
Target Start/End: Complemental strand, 18462423 - 18462288
Alignment:
Q  8 agattatactgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaa 107  Q
    ||||| || |||| || ||||| |||||||||| | ||||||||| ||||||||||| |||| ||||||||||        ||||||||||||| || ||    
T  18462423 agattctaatgacttgatgaaaggagggaccaaaaatggaagaatctgaaattacagggacaaaatctaaatcttttttttacagggactaaaaccggaa 18462324  T
Q  108 tttgctaatattacagggacaaaaagaggtatttac 143  Q
    || ||||||||||||||||| |||||||||||||||    
T  18462323 ttcgctaatattacagggacgaaaagaggtatttac 18462288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 143
Target Start/End: Complemental strand, 24467766 - 24467631
Alignment:
Q  8 agattatactgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaa 107  Q
    ||||| || |||| || ||||| |||||||||| ||||||||||| ||||||||||| |||| ||||||||||        |||||||||||||| | ||    
T  24467766 agattctaatgacttgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttacagggactaaaattggaa 24467667  T
Q  108 tttgctaatattacagggacaaaaagaggtatttac 143  Q
    || ||||||||||||||||| |||||| ||||||||    
T  24467666 ttcgctaatattacagggacgaaaagatgtatttac 24467631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 52058256 - 52058384
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc-nnnnnnnnacagggactaaaatcgaaatttgcta 114  Q
    ||||| || ||||| |||||||||| ||||||||||| ||||||||||| |||||||||||||||         ||||| ||||||| | ||||| ||||    
T  52058256 ctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacataatctaaatctttttttctacaggaactaaaaccaaaattcgcta 52058355  T
Q  115 atattacagggacaaaaagaggtatttac 143  Q
    ||||||||||||| |||||||||||||||    
T  52058356 atattacagggacgaaaagaggtatttac 52058384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 143
Target Start/End: Complemental strand, 39826174 - 39826052
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgctaatatta 120  Q
    ||||| ||||||||| ||| ||||||||||| ||||||||||| |||| ||||||||||         ||||||||||||||||||||| ||||||||||    
T  39826174 tggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaatcgaaattcgctaatatta 39826075  T
Q  121 cagggacaaaaagaggtatttac 143  Q
     | |||| |||||||||||||||    
T  39826074 tatggacgaaaagaggtatttac 39826052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 24467867 - 24467939
Alignment:
Q  8 agattatactgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc 80  Q
    ||||| ||||||| ||||||||||||||||||| ||||||||||| ||||||||||| |||| ||||||||||    
T  24467867 agattctactgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 24467939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 7473921 - 7473862
Alignment:
Q  17 tgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatcta 76  Q
    |||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  7473921 tgacgtggtgaaatgagggaccaaaagtggaagaatatgaaattacagagacataatcta 7473862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 17606438 - 17606307
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-----acagggactaaaatcgaaattt 110  Q
    ||||| || |||||||||||||||| ||||||||||| |||||||||||  ||| ||||||||||             |||||||||||||||| ||||     
T  17606438 ctgacgtgatgaaatgagggaccaaaagtggaagaatatgaaattacaggaacaaaatctaaatctttttttttttttacagggactaaaatcggaattc 17606339  T
Q  111 gctaatattacagggacaaaaagaggtattta 142  Q
    ||||||||||||||||| ||||||||||||||    
T  17606338 gctaatattacagggacgaaaagaggtattta 17606307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 17606556 - 17606679
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    ||||| ||||| ||| ||||||||| ||||||||||| ||||||||||  |||| ||||||||||        ||||||||||||| || |||| |||||    
T  17606556 ctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatcttttttt-acagggactaaaaccggaattcgctaa 17606654  T
Q  116 tattacagggacaaaaagaggtatt 140  Q
    |||||||||||| ||||||||||||    
T  17606655 tattacagggacgaaaagaggtatt 17606679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 29696685 - 29696567
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattacagg 124  Q
    ||||| ||| ||| || ||||||||||| ||||||||| | |||| ||||||||||        |||| |||||||| ||||||| ||||||||||||||    
T  29696685 tgaaaggagtgacaaaaagtggaagaatatgaaattacggggacaaaatctaaatcttttttttacagagactaaaaccgaaattcgctaatattacagg 29696586  T
Q  125 gacaaaaagaggtatttac 143  Q
    ||| |||||||||||||||    
T  29696585 gacgaaaagaggtatttac 29696567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 143
Target Start/End: Original strand, 30299485 - 30299607
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc-nnnnnnnnacagggactaaaatcgaaatttgctaatatta 120  Q
    ||||| ||||||||||||| ||||||||||| | ||||||||| |||| ||||||||||         ||||| ||||||| ||||||||||||||||||    
T  30299485 tggtggaatgagggaccaaaagtggaagaatctaaaattacagggacaaaatctaaatctttttttttacaggaactaaaaccgaaatttgctaatatta 30299584  T
Q  121 cagggacaaaaagaggtatttac 143  Q
    ||| ||| |||| ||||||||||    
T  30299585 cagagacgaaaataggtatttac 30299607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 143
Target Start/End: Original strand, 39711326 - 39711448
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc-nnnnnnnnacagggactaaaatcgaaatttgctaatatta 120  Q
    ||||| ||||||||||||| ||||||||||| ||||||||| | |||| ||||||||||         ||||||||||||| |  |||| ||||||||||    
T  39711326 tggtggaatgagggaccaaaagtggaagaatatgaaattacggggacaaaatctaaatctttttttttacagggactaaaaccagaattcgctaatatta 39711425  T
Q  121 cagggacaaaaagaggtatttac 143  Q
    ||||||| |||||||||||||||    
T  39711426 cagggacgaaaagaggtatttac 39711448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 143
Target Start/End: Original strand, 39826312 - 39826422
Alignment:
Q  34 ggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgctaatattacagggacaaaaa 132  Q
    ||||||| ||||||||||| ||||||||||| |||| ||||||||||         ||||||||||||| ||||||| |||||||||||| |||| ||||    
T  39826312 ggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccgaaattcgctaatattacatggacgaaaa 39826411  T
Q  133 gaggtatttac 143  Q
    |||||||||||    
T  39826412 gaggtatttac 39826422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 143
Target Start/End: Complemental strand, 34749261 - 34749140
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattac 121  Q
    ||||| ||||||||||||| ||||||||||| ||||||||| | |||| ||||||||||        | |||||||||||||  |||| |||||||||||    
T  34749261 tggtggaatgagggaccaaaagtggaagaatatgaaattacggggacaaaatctaaatcttttttttatagggactaaaatcagaattcgctaatattac 34749162  T
Q  122 agggacaaaaagaggtatttac 143  Q
    |||||  |||||| ||||||||    
T  34749161 agggatgaaaagatgtatttac 34749140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 4907092 - 4906964
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc-nnnnnnnnacagggactaaaatcgaaatttgcta 114  Q
    ||||| ||||| ||||||||||||| ||||||||||| ||||||||||| |||| ||||||||||         |||||||||||||    ||||  |||    
T  4907092 ctgacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcattttttttacagggactaaaactagaattcacta 4906993  T
Q  115 atattacagggacaaaaagaggtatttac 143  Q
    ||||||||||||| |||||||||||||||    
T  4906992 atattacagggacgaaaagaggtatttac 4906964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 8293055 - 8293119
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc 80  Q
    ||||||||||| ||||||||||||| ||||||||||| ||||||||||| |||| ||||||||||    
T  8293055 ctgacatggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc 8293119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 30299352 - 30299234
Alignment:
Q  25 tgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgctaatattacag 123  Q
    ||||| ||| |||||| ||||||||||| ||||||||||| |||| ||||||||||         ||||| |||||||||||| || |||||||||||||    
T  30299352 tgaaaggagagaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagg-actaaaatcgaagttcgctaatattacag 30299254  T
Q  124 ggacaaaaagaggtatttac 143  Q
    |||| |||||||||||||||    
T  30299253 ggacgaaaagaggtatttac 30299234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 42510138 - 42510027
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattac 121  Q
    |||||||||||||||| || ||||||||||| ||||||||||| |||| |||||||||         ||||||| ||||| || |||| |||||||||||    
T  42510138 tggtgaaatgagggactaaaagtggaagaatatgaaattacagggacaaaatctaaattatttttttacagggattaaaaccggaattcgctaatattac 42510039  T
Q  122 agggacaaaaag 133  Q
    ||||| ||||||    
T  42510038 agggataaaaag 42510027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 39970776 - 39970647
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc--nnnnnnnnacagggactaaaatcgaaatttgct 113  Q
    ||||| ||||| ||||||||||||| ||||||||||| |||||||||| ||||| ||||||||||          |||| || |||||| |||||| | |    
T  39970776 ctgacgtggtggaatgagggaccaaaagtggaagaatctgaaattacatagacaaaatctaaatcttttttttttacagagattaaaattgaaattcgtt 39970677  T
Q  114 aatattacagggacaaaaagaggtatttac 143  Q
    ||||||||| |||| |||||||||||||||    
T  39970676 aatattacatggacgaaaagaggtatttac 39970647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 52058135 - 52058077
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc 80  Q
    ||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||||||    
T  52058135 tggtgaaatgagggaccaaaagtggaagaatctgaaattacagggacatagtctaaatc 52058077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 122
Target Start/End: Original strand, 16294185 - 16294302
Alignment:
Q  6 gtagattatactgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcg 104  Q
    ||||||| | |||||||||| |||| ||||||||| |||||| |||| ||||||||||  |||| |||||||||          ||||||||||||||||    
T  16294185 gtagattctgctgacatggttaaataagggaccaaaagtggaggaatatgaaattacaaggacaaaatctaaattttttattttacagggactaaaatcg 16294284  T
Q  105 aaatttgctaatattaca 122  Q
    ||||||||||||||||||    
T  16294285 aaatttgctaatattaca 16294302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 18462533 - 18462658
Alignment:
Q  17 tgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc-nnnnnnnnacagggactaaaatcgaaatttgctaa 115  Q
    |||| |||||||||||| |||||| ||||||||||| ||||||||| | |||| ||||||||||         ||| | ||||||| || ||||||||||    
T  18462533 tgacgtggtgaaatgagagaccaaaagtggaagaatctgaaattacggggacaaaatctaaatctttttttatacaagaactaaaaccggaatttgctaa 18462632  T
Q  116 tattacagggacaaaaagaggtattt 141  Q
    |||||||||||  |||||||||||||    
T  18462633 tattacagggaggaaaagaggtattt 18462658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 4907202 - 4907274
Alignment:
Q  8 agattatactgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc 80  Q
    ||||| ||||||| || ||||| |||||||||| ||||||||||| ||||||||||| |||| ||||||||||    
T  4907202 agattctactgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 4907274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 33628814 - 33628686
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgctaatatta 120  Q
    ||||| ||||||||||||| |||| |||||| ||||||||| | |||| ||||||||||         || |||||||||| |  |||| ||||||||||    
T  33628814 tggtggaatgagggaccaaaagtgaaagaatctgaaattacggggacaaaatctaaatctttttttttacggggactaaaaccagaattcgctaatatta 33628715  T
Q  121 cagggacaaaaagaggtatttactctaaa 149  Q
    ||||||| ||||||||||||||| |||||    
T  33628714 cagggacgaaaagaggtatttaccctaaa 33628686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 39711187 - 39711076
Alignment:
Q  31 gagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattacagggacaaa 130  Q
    |||||||||| ||||||||||| ||||||||||  |||| ||||||||||        ||||||||||||| || |||| ||||||||||||  ||| ||    
T  39711187 gagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatcttttttttacagggactaaaaccggaattcgctaatattaca-agacgaa 39711089  T
Q  131 aagaggtatttac 143  Q
    |||||||||||||    
T  39711088 aagaggtatttac 39711076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 151
Target Start/End: Original strand, 48072209 - 48072345
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaat-cnnnnnnnnacagggactaaaatcgaaatttgcta 114  Q
    ||||| |||||||||||||  |||| ||||||||||| ||||||||||| ||||||||||||||          ||| ||||||||| || ||||  |||    
T  48072209 ctgacgtggtgaaatgaggacccaaaagtggaagaatatgaaattacagggacataatctaaatatttttttttacaaggactaaaaccggaattcacta 48072308  T
Q  115 atattacagggacaaaaagaggtatttactctaaaaa 151  Q
    ||||||||  ||| ||||||||||||||| |||||||    
T  48072309 atattacaatgacgaaaagaggtatttaccctaaaaa 48072345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 140
Target Start/End: Original strand, 33629012 - 33629063
Alignment:
Q  89 acagggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatt 140  Q
    ||||||||||||| || |||| ||||||||||||||||||||||||||||||    
T  33629012 acagggactaaaaccggaattcgctaatattacagggacaaaaagaggtatt 33629063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 143
Target Start/End: Original strand, 18342339 - 18342393
Alignment:
Q  89 acagggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttac 143  Q
    ||||||||||||| ||||||| ||||||||||||||||| |||| ||||||||||    
T  18342339 acagggactaaaaccgaaattcgctaatattacagggacgaaaaaaggtatttac 18342393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 143
Target Start/End: Original strand, 34749368 - 34749481
Alignment:
Q  31 gagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgctaatattacagggacaa 129  Q
    |||| ||||| ||||||||||| ||||||||||| || | ||||||||||         ||| |||||||||||| |||| | ||||||||||| |||||    
T  34749368 gaggtaccaaaagtggaagaatctgaaattacagggataaaatctaaatctttttttttacaaggactaaaatcggaattcgataatattacagagacaa 34749467  T
Q  130 aaagaggtatttac 143  Q
    ||||||||||||||    
T  34749468 aaagaggtatttac 34749481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 147
Target Start/End: Complemental strand, 43539477 - 43539345
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgcta 114  Q
    ||||| || ||||| |||||||||| ||||||| ||| | ||||||||| |||| ||||||||||         ||| |||||||||||| |||||||||    
T  43539477 ctgacgtgatgaaaggagggaccaaaagtggaacaatataaaattacagggacaaaatctaaatcgttttttttacaaggactaaaatcggaatttgcta 43539378  T
Q  115 atattacagggacaaaaagaggtatttactcta 147  Q
    || ||||| |||  ||||||| |||||||||||    
T  43539377 atcttacatggatgaaaagagatatttactcta 43539345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 143
Target Start/End: Original strand, 39970968 - 39971022
Alignment:
Q  89 acagggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttac 143  Q
    ||||||||||||| ||||||| | |||||||||| |||| |||||||||||||||    
T  39970968 acagggactaaaaccgaaattcgttaatattacatggacgaaaagaggtatttac 39971022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 143
Target Start/End: Original strand, 29696812 - 29696933
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnnacagggactaaaatcgaaatttgctaatattac 121  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||  |||| ||||||| |         |||| |||||||| || |||| |||||||||||    
T  29696812 tggtggaatgagggaccaaaagtggaagaatctgaaattacatggacaaaatctaatttttttttttacagtgactaaaaccggaattcgctaatattac 29696911  T
Q  122 agggacaaaaagaggtatttac 143  Q
    |   || |||||||||||||||    
T  29696912 ataaacgaaaagaggtatttac 29696933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 8292934 - 8292806
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc-nnnnnnnnacagggactaaaatcgaaatttgcta 114  Q
    ||||| || ||||| |||| ||||| ||||||||||| ||||||| ||| |||| ||||||||||         ||||||||||||| ||  ||| ||||    
T  8292934 ctgacgtgatgaaaagaggaaccaaaagtggaagaatatgaaatttcagggacaaaatctaaatcttttattttacagggactaaaaccgggattcgcta 8292835  T
Q  115 atattacagggacaaaaagaggtatttac 143  Q
    ||| ||||||||| ||||||| |||||||    
T  8292834 atagtacagggacgaaaagagttatttac 8292806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 140
Target Start/End: Original strand, 43539669 - 43539720
Alignment:
Q  89 acagggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatt 140  Q
    ||||| ||||||| || |||||||||||||||||||||| ||||||| ||||    
T  43539669 acaggaactaaaaccggaatttgctaatattacagggacgaaaagagctatt 43539720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 16294099 - 16294045
Alignment:
Q  95 actaaaatcgaaatttgctaatattacagggacaaaaagaggtatttactctaaa 149  Q
    ||||||||||||||| ||||||||||||||||| ||||  |||||| || |||||    
T  16294099 actaaaatcgaaattcgctaatattacagggaccaaaatcggtattaaccctaaa 16294045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 143
Target Start/End: Complemental strand, 20995754 - 20995700
Alignment:
Q  89 acagggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttac 143  Q
    ||||||||||||| || |||| ||||||||||||| ||  |||||||||||||||    
T  20995754 acagggactaaaaccggaattcgctaatattacagagatgaaaagaggtatttac 20995700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 13230059 - 13230108
Alignment:
Q  94 gactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttac 143  Q
    |||||||| ||||||| ||||||||| ||| ||| |||||||||||||||    
T  13230059 gactaaaaccgaaattcgctaatatttcagagacgaaaagaggtatttac 13230108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 64
Target Start/End: Complemental strand, 17606531 - 17606494
Alignment:
Q  27 aaatgagggaccaacagtggaagaatttgaaattacag 64  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  17606531 aaatgagggaccaaaagtggaggaatttgaaattacag 17606494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 33628928 - 33628996
Alignment:
Q  6 gtagattatactgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatc 74  Q
    ||||||| | ||||| || | ||| |||||||||| ||||||||||| ||||||||||| |||| ||||    
T  33628928 gtagattctgctgacgtgattaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatc 33628996  T

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Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 42510166 - 42510206
Alignment:
Q  24 gtgaaatgagggaccaacagtggaagaatttgaaattacag 64  Q
    ||||||||||||||||| |||||| |||| |||||||||||    
T  42510166 gtgaaatgagggaccaaaagtggaggaatctgaaattacag 42510206  T

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Target: scaffold0141 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 8378 - 8319
Alignment:
Q  92 gggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttactctaaaaa 151  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||||||||||| |||||||    
T  8378 gggactaaaaccgaaattcgctaatattacagggacgaaaagaggtatttaccctaaaaa 8319  T

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Target: scaffold0141; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 8570 - 8634
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc 80  Q
    ||||| ||||| ||||||||||||| ||||||||||| | ||||||||| |||| ||||||||||    
T  8570 ctgacgtggtggaatgagggaccaaaagtggaagaatctaaaattacagggacaaaatctaaatc 8634  T

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Target: scaffold0477 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 150
Target Start/End: Complemental strand, 4932 - 4875
Alignment:
Q  93 ggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttactctaaaa 150  Q
    ||||||||| ||||||| |||||||||||||| |||||||||||||||||| ||||||    
T  4932 ggactaaaaccgaaattcgctaatattacaggaacaaaaagaggtatttaccctaaaa 4875  T

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Target: scaffold0477; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 5002 - 5059
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaat 79  Q
    ||||| ||||||||||||| ||||||||||| | ||||||||| |||  |||||||||    
T  5002 tggtggaatgagggaccaaaagtggaagaatctaaaattacagggactaaatctaaat 5059  T

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Target: scaffold0117 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 12230 - 12355
Alignment:
Q  16 ctgacatggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn-acagggactaaaatcgaaatttgcta 114  Q
    ||||| || ||||| || ||||||| ||||||||||| ||||||||||| |||| ||||||||||         | ||||||||||| || |||| ||||    
T  12230 ctgacgtgatgaaaggatggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttatagggactaaaaccggaattcgcta 12329  T
Q  115 atattacagggacaaaaagaggtatt 140  Q
    ||||||||||||| ||||||||||||    
T  12330 atattacagggacgaaaagaggtatt 12355  T

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Target: scaffold0352 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 143
Target Start/End: Original strand, 6001 - 6055
Alignment:
Q  89 acagggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttac 143  Q
    |||||||||||||||| |||| ||||||||| ||||||| |||||||||||||||    
T  6001 acagggactaaaatcggaattcgctaatattgcagggaccaaaagaggtatttac 6055  T

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Target: scaffold0352; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 4721 - 4664
Alignment:
Q  91 agggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttactctaa 148  Q
    |||||||||||  | |||| ||||||||| ||||||| ||||||||||||||| ||||    
T  4721 agggactaaaactggaattcgctaatattgcagggactaaaagaggtatttaccctaa 4664  T

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Target: scaffold0449 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 143
Target Start/End: Original strand, 7466 - 7576
Alignment:
Q  35 gaccaacagtggaagaatttgaaattacagagacataatctaaatcnnnnnnnn--acagggactaaaatcgaaatttgctaatattacagggacaaaaa 132  Q
    |||||| ||| ||||||| ||||||||||| |||| ||||||||||          ||||||||||||| || |||| ||||||||||||||||| ||||    
T  7466 gaccaaaagtagaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaa 7565  T
Q  133 gaggtatttac 143  Q
     ||||||||||    
T  7566 taggtatttac 7576  T

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Target: scaffold0449; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 7350 - 7292
Alignment:
Q  22 tggtgaaatgagggaccaacagtggaagaatttgaaattacagagacataatctaaatc 80  Q
    ||||| ||||||||||| | ||||||||||| ||||||||||| |||| ||||||||||    
T  7350 tggtggaatgagggaccgaaagtggaagaatatgaaattacagggacaaaatctaaatc 7292  T

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Target: scaffold0176 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 15950 - 16010
Alignment:
Q  89 acagggactaaaatcgaaatttgctaatattacagggacaaaaagaggtatttactctaaa 149  Q
    |||| |||||||| || |||| |||||||||||| |||| ||||||| ||||||| |||||    
T  15950 acagagactaaaaccggaattcgctaatattacatggacgaaaagagatatttaccctaaa 16010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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