View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6006_low_9 (Length: 411)
Name: NF6006_low_9
Description: NF6006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6006_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 353; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 18 - 401
Target Start/End: Original strand, 30483069 - 30483446
Alignment:
| Q |
18 |
ataattgccatgcaccacttgcctgtgcgaaatcataaattaattagtcctcaatatattaattttttcccttagtgtaattaaattttttccctgcata |
117 |
Q |
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| T |
30483069 |
ataattgccatgcaccacttgcctg------atcataaattaattagtcctcaatatattaattttttcccttagtgtaattaaattttttccctgcata |
30483162 |
T |
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| Q |
118 |
ccttatcaacatgaatggctttcctgactgcatcgttgtttagccacgtggttgctacttcatcattctgcgttttgcgaaatttgttattggtttcctt |
217 |
Q |
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| T |
30483163 |
ccttatcaacatgaatggctttcctgactgcatcgttgtttagccatgtggttgctacttcatcattctgcgttttgcgaaatttgttattggtttcctt |
30483262 |
T |
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| Q |
218 |
aatcagtgccaggttaacacgacccaaattaaatttatatcataaaaacttacaacacaagggacatgtctcctttgggcagccattaattgaggccata |
317 |
Q |
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| T |
30483263 |
aatcagtgccaggttaacacgacccaaattaaattcatatcataaaaacttacaacacaagggacatgtctcctttgggcagccattaattgaggccata |
30483362 |
T |
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| Q |
318 |
aggtaacaaggccatctctgactggtgccctaaaaggccaagctctaccaaacatcctctttctcacttggagaggtctctctg |
401 |
Q |
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| T |
30483363 |
aggtaacaaggccatctctgactggtgccctaaaaggccaagctctaccaaacatcctctttctcacttggagaggtctctctg |
30483446 |
T |
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