View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6009_high_15 (Length: 336)
Name: NF6009_high_15
Description: NF6009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6009_high_15 |
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Alignment Details
Target: chr7 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 10 - 319
Target Start/End: Original strand, 30171336 - 30171645
Alignment:
| Q |
10 |
gaagaatatgtgatcacataattaataatatggtcatgagttacattacatggtgtccagtggaataagccttttcatgtgctgattcgttcaaactgtt |
109 |
Q |
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| T |
30171336 |
gaagaaaatgtgatcacataattaataatatggtcatgagttacattacatggtgtccagtggaataagccttttcatgtgctgattcgttcaaactgtt |
30171435 |
T |
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| Q |
110 |
gctcactgtttcactgactcctgctccttgtttgattccatcagtggtgattgaaccatcttcattatgtgactttggaacctacatattcatcacaata |
209 |
Q |
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| T |
30171436 |
gctcactgtttcactgactcctgctccttgtttgattccatcagtggtgattgaaccatcttcattatgtgactttggaacctacatattcatcacaatt |
30171535 |
T |
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| Q |
210 |
cattacgataatataaattagtgaatattcacacacacattacaaacatgaatgtgaataattatttacttggataagtcttggggaagctgctgcaaag |
309 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30171536 |
cattacgaaaatataaattagtgaatattcacacacacattacaaacatgaatgtgaataattatttacttggataagtcttggggaagctgctgcaaag |
30171635 |
T |
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| Q |
310 |
accctagagt |
319 |
Q |
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|||||||||| |
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| T |
30171636 |
accctagagt |
30171645 |
T |
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