View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6009_high_37 (Length: 232)
Name: NF6009_high_37
Description: NF6009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6009_high_37 |
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Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 40327978 - 40327764
Alignment:
| Q |
1 |
cttatctattactattgtttcatgaacataactaaaatcttagaccaactctgccatattgagtccatatgtgcttttacagctaagtgtgttcctttaa |
100 |
Q |
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| T |
40327978 |
cttatctattactattgtttcataaacataactaaaatcttagaccaactctgccatattgagtccatatgtgcttttacagctaagtgtgttcctttaa |
40327879 |
T |
|
| Q |
101 |
tatggcacacctctgaggatttaaatccacatgcaagatacaaactaatgttcaaggtgcaaagaaccaacacgccatcgttttctatgaactattgcat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40327878 |
tatggcacacctctgaggatttaaatccacatgcaagatacaaactaatgttcaaggtgcaaagaaccaacacgccatcgttttctatgaactattgcat |
40327779 |
T |
|
| Q |
201 |
gaaagctactagttt |
215 |
Q |
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||||||||||||||| |
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| T |
40327778 |
gaaagctactagttt |
40327764 |
T |
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