View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6011_high_6 (Length: 273)
Name: NF6011_high_6
Description: NF6011
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6011_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 6 - 249
Target Start/End: Original strand, 41188099 - 41188343
Alignment:
| Q |
6 |
acatcatcaaattgtataacatcccacttaaaatatgtcacaccattttttagtctaaaaatccacaaaaatgaccaaaacttaatggttttaaattaga |
105 |
Q |
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| T |
41188099 |
acatcatcaaattgtataacatcccatttaaaatatgtcacaccattttttagtctaaaaatccacaaaaatgaccaaaacttaatgattttaaattaga |
41188198 |
T |
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| Q |
106 |
agtgcaaattttgtgatcgagttaaaatacaaagatcaaaatttcagttaaacgaaaagaa-aattatttgctatagggtataactaacaagtgttctaa |
204 |
Q |
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| T |
41188199 |
agtgcaaattttgtgatcgagttaaaatacaaagatcaaaattgcagttaaacgaaaagaacaattatttgctatagggtataactaacaagtgttctaa |
41188298 |
T |
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| Q |
205 |
atacacatgttaaagaagcaaatataagaatatctcttccatagg |
249 |
Q |
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| T |
41188299 |
atacatatattaaagaagcaaatataagaatatctcttccatagg |
41188343 |
T |
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