View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6013_high_11 (Length: 239)
Name: NF6013_high_11
Description: NF6013
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6013_high_11 |
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Alignment Details
Target: chr1 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 11 - 222
Target Start/End: Original strand, 39997916 - 39998127
Alignment:
| Q |
11 |
tgagatgaatttaacaacatcttatatactaccatttttctagtgtcatcttaataatgcacatagcaaatcaattactttagaaaggagtatcatgtac |
110 |
Q |
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| T |
39997916 |
tgagatgaatttaacaacatcttatatactaccatttttctagtgtcatcttaataatgcacatagcaaatcaattactttagaaaggagtatcatgtac |
39998015 |
T |
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| Q |
111 |
taaagagaatgaccaatttccaggaatccaagagagacacttggacagtggaaatcgaatcttttgaaggccattgcttaaagtaaattttgcttaggag |
210 |
Q |
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| T |
39998016 |
taaagagaatgaccaatttccaggaatccaagagagacacttggacagtggaaatcgaatcttttgaaggccattgcttaaagtaaattttgcttaggag |
39998115 |
T |
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| Q |
211 |
ggccctcaattt |
222 |
Q |
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|||||||||||| |
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| T |
39998116 |
ggccctcaattt |
39998127 |
T |
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