View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6013_low_3 (Length: 548)

Name: NF6013_low_3
Description: NF6013
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6013_low_3
NF6013_low_3
[»] chr5 (7 HSPs)
chr5 (247-530)||(32676610-32676891)
chr5 (272-523)||(38989252-38989494)
chr5 (351-515)||(40837726-40837889)
chr5 (149-367)||(40837970-40838186)
chr5 (263-518)||(41815601-41815856)
chr5 (426-524)||(10613135-10613233)
chr5 (386-486)||(4111966-4112066)
[»] chr6 (17 HSPs)
chr6 (245-524)||(12843814-12844092)
chr6 (245-524)||(14494412-14494690)
chr6 (156-521)||(17539931-17540295)
chr6 (247-508)||(19542064-19542325)
chr6 (245-520)||(1255634-1255912)
chr6 (230-520)||(56923-57201)
chr6 (305-520)||(19294300-19294512)
chr6 (334-521)||(34708842-34709028)
chr6 (346-524)||(34013448-34013625)
chr6 (346-524)||(34011225-34011402)
chr6 (268-524)||(2602001-2602255)
chr6 (287-438)||(33234871-33235016)
chr6 (418-499)||(12790562-12790643)
chr6 (245-322)||(34709064-34709141)
chr6 (149-214)||(19294549-19294614)
chr6 (149-214)||(14494316-14494381)
chr6 (268-313)||(17261715-17261760)
[»] chr3 (24 HSPs)
chr3 (231-518)||(11410600-11410887)
chr3 (245-520)||(43921916-43922190)
chr3 (257-518)||(21408844-21409105)
chr3 (245-520)||(27063655-27063930)
chr3 (157-520)||(26565226-26565577)
chr3 (245-430)||(10516138-10516323)
chr3 (246-521)||(17715817-17716092)
chr3 (246-521)||(19017046-19017321)
chr3 (245-430)||(10657411-10657595)
chr3 (426-518)||(27111149-27111242)
chr3 (230-356)||(14218476-14218604)
chr3 (269-362)||(29697023-29697116)
chr3 (331-392)||(2227280-2227340)
chr3 (305-390)||(49860462-49860546)
chr3 (414-507)||(14218381-14218476)
chr3 (412-464)||(49860407-49860459)
chr3 (490-521)||(2227457-2227488)
chr3 (475-530)||(32706375-32706430)
chr3 (230-304)||(49861099-49861174)
chr3 (334-383)||(27109376-27109424)
chr3 (413-490)||(27109420-27109497)
chr3 (334-383)||(27109774-27109822)
chr3 (69-129)||(10515952-10516012)
chr3 (483-519)||(44613364-44613400)
[»] chr2 (20 HSPs)
chr2 (287-524)||(9929542-9929778)
chr2 (245-524)||(26575978-26576250)
chr2 (245-510)||(27003960-27004227)
chr2 (319-524)||(32200870-32201074)
chr2 (245-520)||(34409554-34409830)
chr2 (251-517)||(44649945-44650202)
chr2 (300-523)||(13037220-13037442)
chr2 (245-448)||(4748053-4748255)
chr2 (245-524)||(17651170-17651447)
chr2 (386-530)||(41848924-41849068)
chr2 (348-514)||(16661253-16661418)
chr2 (471-520)||(4748257-4748306)
chr2 (402-478)||(40279805-40279879)
chr2 (245-326)||(15990041-15990123)
chr2 (148-302)||(13039011-13039165)
chr2 (149-214)||(34409459-34409524)
chr2 (456-523)||(18724894-18724962)
chr2 (146-204)||(41849228-41849286)
chr2 (149-209)||(17651476-17651536)
chr2 (335-439)||(38783673-38783776)
[»] chr8 (22 HSPs)
chr8 (245-524)||(28420952-28421230)
chr8 (245-524)||(15131941-15132218)
chr8 (256-522)||(44502204-44502469)
chr8 (312-520)||(15850496-15850703)
chr8 (240-524)||(1225967-1226250)
chr8 (318-510)||(37855085-37855276)
chr8 (269-439)||(18393548-18393717)
chr8 (246-520)||(18603044-18603304)
chr8 (272-517)||(27401741-27401985)
chr8 (268-524)||(13097355-13097604)
chr8 (302-411)||(2889764-2889872)
chr8 (302-411)||(3145263-3145371)
chr8 (461-521)||(44508417-44508477)
chr8 (149-211)||(15131843-15131905)
chr8 (477-530)||(3159745-3159798)
chr8 (302-418)||(3159848-3159963)
chr8 (270-349)||(31772527-31772606)
chr8 (302-426)||(2796200-2796326)
chr8 (386-439)||(28867284-28867337)
chr8 (386-439)||(28869847-28869900)
chr8 (334-418)||(2875441-2875524)
chr8 (489-517)||(31119324-31119352)
[»] chr7 (23 HSPs)
chr7 (230-503)||(37338721-37338993)
chr7 (266-521)||(27616239-27616494)
chr7 (245-515)||(46532774-46533043)
chr7 (305-518)||(22290779-22290991)
chr7 (247-488)||(32716489-32716728)
chr7 (308-431)||(45215999-45216121)
chr7 (280-436)||(11809286-11809440)
chr7 (268-436)||(11820525-11820691)
chr7 (293-366)||(44572487-44572560)
chr7 (421-507)||(44572565-44572651)
chr7 (263-405)||(6439769-6439914)
chr7 (374-524)||(11812611-11812752)
chr7 (287-439)||(27993898-27994052)
chr7 (337-506)||(44182664-44182831)
chr7 (347-436)||(11816926-11817013)
chr7 (471-524)||(45216113-45216166)
chr7 (336-436)||(11810979-11811077)
chr7 (287-524)||(11814414-11814642)
chr7 (478-518)||(11815708-11815748)
chr7 (437-520)||(10678255-10678338)
chr7 (141-292)||(10678435-10678584)
chr7 (268-430)||(48598314-48598474)
chr7 (149-214)||(45215898-45215963)
[»] chr1 (16 HSPs)
chr1 (245-510)||(32740775-32741036)
chr1 (245-520)||(9148972-9149243)
chr1 (232-508)||(48632542-48632813)
chr1 (149-504)||(23431798-23432155)
chr1 (245-512)||(7021541-7021811)
chr1 (267-439)||(3954946-3955117)
chr1 (268-439)||(3387651-3387821)
chr1 (304-435)||(18476506-18476637)
chr1 (252-363)||(126323-126435)
chr1 (268-524)||(16426343-16426598)
chr1 (355-459)||(125153-125256)
chr1 (287-439)||(50127176-50127326)
chr1 (466-520)||(10171642-10171696)
chr1 (155-309)||(18488333-18488488)
chr1 (471-530)||(30883231-30883290)
chr1 (471-520)||(124379-124428)
[»] chr4 (16 HSPs)
chr4 (151-524)||(45612316-45612685)
chr4 (230-436)||(17732772-17732979)
chr4 (149-451)||(40289031-40289330)
chr4 (338-524)||(54305567-54305752)
chr4 (230-403)||(31734527-31734697)
chr4 (349-524)||(55680648-55680822)
chr4 (265-419)||(44507704-44507857)
chr4 (254-450)||(2641122-2641321)
chr4 (245-326)||(3419960-3420041)
chr4 (393-523)||(658541-658671)
chr4 (471-521)||(35529481-35529532)
chr4 (374-450)||(35530048-35530122)
chr4 (249-329)||(658455-658536)
chr4 (300-353)||(24600931-24600984)
chr4 (300-353)||(24614618-24614671)
chr4 (461-513)||(40289809-40289860)
[»] scaffold0325 (1 HSPs)
scaffold0325 (263-519)||(12794-13050)
[»] scaffold0019 (1 HSPs)
scaffold0019 (232-523)||(70030-70323)
[»] scaffold0012 (1 HSPs)
scaffold0012 (268-439)||(209187-209355)
[»] scaffold1723 (1 HSPs)
scaffold1723 (268-439)||(334-502)


Alignment Details
Target: chr5 (Bit Score: 173; Significance: 9e-93; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 173; E-Value: 9e-93
Query Start/End: Original strand, 247 - 530
Target Start/End: Original strand, 32676610 - 32676891
Alignment:
Q  247 atacaagagttacatgtgtgttgagaaatgtagatcaattaggggt-tatagacattaaagttgattataacatttttagctttcttgatagtagatgaa 345  Q
    ||||||||||||||| ||| ||||||||||| | |||||||||||  |||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  32676610 atacaagagttacatatgttttgagaaatgttgttcaattagggggatatagacattaaagttgattataacatttttaacttttttgatagtagatgaa 32676709  T
Q  346 taaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgtt 445  Q
    ||||||| | ||||||| ||||||||||| |||||| || |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||    
T  32676710 taaataa-gatcaaataatatgatatctt-gttttataactttttctaatgaaataaattgctcaa-ttagatgcttatgtatgtattttgattttcatt 32676806  T
Q  446 ttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcgacgtgccagtg 530  Q
    |||||||||||| | |||| |||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||| |||||    
T  32676807 ttagaccgtctaaaaataaattaacatatatgtagcagggtcggtgtcctattttttttacattagcggtgtcgacgtgtcagtg 32676891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 272 - 523
Target Start/End: Original strand, 38989252 - 38989494
Alignment:
Q  272 aaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatgaataaataaaggtcaaatactatgatat 371  Q
    |||||| |||||||||||||||||||||||||   ||||||||| ||||||||  | | ||||||||||||||||||||||| |||||||||||||||||    
T  38989252 aaatgttgatcaattaggggttatagacattat--ttgattatatcatttttaaatcttttgatagtagatgaataaataaaagtcaaatactatgatat 38989349  T
Q  372 ctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgttttagaccgtctatagataatttaaca 471  Q
    | ||||| ||||| |||||||||||| ||||||| ||||| ||||||| | || |||||||||| |      ||||||||||||| |  | || |||| |    
T  38989350 c-ttgttgtagaactttttctaatgacataaattgctcaagttagatgttgatatatgtattttaa------ttttagaccgtctttgaaaaaattaaaa 38989442  T
Q  472 tatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcgacgt 523  Q
    |||||||| |  |||| ||||||||||||||||||||||||| |||||||||    
T  38989443 tatatgtaacgttgtcagtgtcctatattttttacattagcgatgtcgacgt 38989494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 351 - 515
Target Start/End: Complemental strand, 40837889 - 40837726
Alignment:
Q  351 aaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgttttaga 450  Q
    |||||||||||||||  ||||||| ||||||||| ||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||| |||||||    
T  40837889 aaaggtcaaatactacaatatctt-gttttagaactttttctaatgaaataatttgctcaagttagatgcttatatatgtattttgattttcattttaga 40837791  T
Q  451 ccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggt 515  Q
    |||| |||| |||| ||||||||||| |||| ||||| ||||| ||||||||||||| |||||||    
T  40837790 ccgtatataaataaattaacatatatctagcggtgtcagtgtcttatattttttacactagcggt 40837726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 149 - 367
Target Start/End: Complemental strand, 40838186 - 40837970
Alignment:
Q  149 ggtgtccgacacctatatagcactcatatgagtcttgttggacaattcagacaaatatctaaaacannnnnnnnctttctcgcttctacatatcgcagat 248  Q
    ||||||||||| ||||||| ||||||||  |||| ||| |||||| |||||||||| |||||||||        | | || ||||| | ||| || ||||    
T  40838186 ggtgtccgacatctatataacactcatacaagtcgtgtcggacaactcagacaaatgtctaaaacattttttttcct-cttgcttccagataccgtagat 40838088  T
Q  249 acaagagttacatgtgtgttgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatgaataa 348  Q
    ||||||||||||| ||| ||||||||||| |||||||||||||| ||| |||||| |||| |||||||||||||||||||| ||||||||||||||||||    
T  40838087 acaagagttacatatgttttgagaaatgttgatcaattaggggtaataaacattatagtttattataacatttttagcttt-ttgatagtagatgaataa 40837989  T
Q  349 ataaaggtcaaatactatg 367  Q
    |||||||||||||| ||||    
T  40837988 ataaaggtcaaatattatg 40837970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 263 - 518
Target Start/End: Original strand, 41815601 - 41815856
Alignment:
Q  263 tgtgttgagaaatgt-agatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatgaataaataaaggtcaaat 361  Q
    ||||||||||||| | |||||||| ||||||||||||||| |||||   |||     ||||||||||| | ||||| ||||| |||||||||||||||||    
T  41815601 tgtgttgagaaatcttagatcaatgaggggttatagacatcaaagtcacttacggtgtttttagctttttcgatagaagatggataaataaaggtcaaat 41815700  T
Q  362 actatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttg-attttcgttttagaccgtctatag 460  Q
       ||  ||| |||||||||||| ||||| |||| |||||| || ||||| |||||||   |||||||| ||||  ||| ||  ||| || | | ||||     
T  41815701 gtcatcttat-tttgttttagaattttttttaattaaataatttgctcaaattagatgaacatgtatgttttttttattctcaatttggatcttttataa 41815799  T
Q  461 ataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtc 518  Q
    |||| |||| ||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  41815800 ataaattaatatatatgtagcggtgtcggtgtcctat-ttttttacattagcggtgtc 41815856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 426 - 524
Target Start/End: Complemental strand, 10613233 - 10613135
Alignment:
Q  426 tatgtattttgattttcgttttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcgacgtg 524  Q
    ||||||||||  ||||| |||||||  |||| || |||| |||||||||||||| | ||||| |||||||||||||||| ||| ||| |||||||||||    
T  10613233 tatgtattttagttttcattttagattgtctttaaataaattaacatatatgtaacggtgtcagtgtcctatatttttttcataagcagtgtcgacgtg 10613135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 386 - 486
Target Start/End: Complemental strand, 4112066 - 4111966
Alignment:
Q  386 tttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgttttagaccgtctatagataatttaacatatatgtagctgtg 485  Q
    ||||| |||||||||||||  |||   |||||||| |||||||||||||||||| ||  |||||| | | |||| |||| |||| ||||| ||||| |||    
T  4112066 tttttttaatgaaataaatggctccggttagatgcatatgtatgtattttgattctcaatttagatcttttatatataaattaatatataagtagcggtg 4111967  T
Q  486 t 486  Q
    |    
T  4111966 t 4111966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 164; Significance: 2e-87; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 245 - 524
Target Start/End: Complemental strand, 12844092 - 12843814
Alignment:
Q  245 agatacaagagttacatgtgtgttgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatga 344  Q
    ||||||||||||||||| ||| ||||||||||| |||||||||||||||||| |||||| ||||||||||| ||||||||||||| ||||||||||||||    
T  12844092 agatacaagagttacatatgttttgagaaatgttgatcaattaggggttatacacattatagttgattatatcatttttagcttttttgatagtagatga 12843993  T
Q  345 ataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgt 444  Q
    |||||||||||||||||||||||||||| || || ||||| || ||||||||||||| ||| ||||| ||||||| |||| |||||||||| |||||| |    
T  12843992 ataaataaaggtcaaatactatgatatc-ttattgtagaacttgttctaatgaaatatattgctcaagttagatgtttatatatgtattttcattttcat 12843894  T
Q  445 tttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcgacgtg 524  Q
    |||||||||||| || |||| |||||||||||||||| ||||  ||||||||||||| ||| |||||| |||||||||||    
T  12843893 tttagaccgtctttaaataaattaacatatatgtagcagtgttagtgtcctatatttgttatattagcagtgtcgacgtg 12843814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 245 - 524
Target Start/End: Original strand, 14494412 - 14494690
Alignment:
Q  245 agatacaagagttacatgtgtgttgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatga 344  Q
    |||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||| | ||||||||||| |||||||| |||| |||||| |||| ||    
T  14494412 agatacaagaattacatatgttttgagaaatgttgatcaattaggggttatagacatcatagttgattatatcatttttaacttttttgataatagacga 14494511  T
Q  345 ataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgt 444  Q
    ||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||| || ||  |||||| |||| |||||||||| |||||| |    
T  14494512 ataaataaaggtcaaatactatgatat-tttgttgtagaactttttctaatgaaataaattgctaaagatagatgtttatatatgtattttaattttcat 14494610  T
Q  445 tttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcgacgtg 524  Q
    |||||||||||| || |||| |||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||    
T  14494611 tttagaccgtctttaaataaattaacatatatgtagcggtgtcggtgtcctgtatattttacattagcggtgtcgacgtg 14494690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 156 - 521
Target Start/End: Complemental strand, 17540295 - 17539931
Alignment:
Q  156 gacacctatatagcactcatatgagtcttgttggacaattcagacaaatatctaaaacannnnnnnnctttctcgcttctacatatcgcagatacaagag 255  Q
    |||||||||||| |||||||||||  | ||| |||||| ||||||||||||||||||||        || ||| |||||  || | |  |||||||||||    
T  17540295 gacacctatataacactcatatgaaccgtgtcggacaactcagacaaatatctaaaacaatttttttctctcttgcttccgcacaccatagatacaagag 17540196  T
Q  256 ttacatgtgtgttgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatgaataaataaagg 355  Q
    |||||| ||| ||||||||||| |||||||||||||||||| |  ||| ||||||||||| ||||||||||||| |||||||||||| ||||||||||||    
T  17540195 ttacatatgttttgagaaatgttgatcaattaggggttataaaagttatagttgattatatcatttttagcttttttgatagtagataaataaataaagg 17540096  T
Q  356 tcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgttttagaccgtc 455  Q
    ||||||||||||||||| || ||  |||| |||||||||||  ||||||| | ||| ||||||| |||| |||||||||| |||||| ||||||||||||    
T  17540095 tcaaatactatgatatc-ttattgcagaactttttctaatgtcataaattgcccaagttagatgtttatatatgtattttaattttcattttagaccgtc 17539997  T
Q  456 tatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcgac 521  Q
    | || |||| ||||||||||||||   ||||||||||| |||||||||||||||| ||||||||||    
T  17539996 tttaaataaattaacatatatgtaatggtgtcggtgtcttatattttttacattaacggtgtcgac 17539931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 247 - 508
Target Start/End: Complemental strand, 19542325 - 19542064
Alignment:
Q  247 atacaagagttacatgtgtgttgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatgaat 346  Q
    ||||||||||||||| ||| ||||||||| | || |||||| |||||| ||| ||||||||||||||||||| ||||||| |||||||||||||||||||    
T  19542325 atacaagagttacatttgttttgagaaatattgaacaattaagggttagagatattaaagttgattataacaattttagcattcttgatagtagatgaat 19542226  T
Q  347 aaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatg-cttatgtatgtattttgattttcgtt 445  Q
    ||||||||| ||||||||| ||||| |||||||||||| |||||| |||||||| ||||| |||| ||||||| ||||||||||||||||||||||  ||    
T  19542225 aaataaaggacaaatactaagatat-tttgttttagaattttttccaatgaaatcaatttttcaagttagatgccttatgtatgtattttgattttaatt 19542127  T
Q  446 ttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacat 508  Q
    ||| |||||||||| |||| |||||||||||||||| || ||| |||||||| ||||||||||    
T  19542126 ttataccgtctataaataaattaacatatatgtagcagtatcgatgtcctatgttttttacat 19542064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 245 - 520
Target Start/End: Original strand, 1255634 - 1255912
Alignment:
Q  245 agatacaagagttacatgtgtgttgagaaatgtagatcaattagggg-ttatagacattaaagttgattataacatttttagctttcttgatagtagatg 343  Q
    ||||||||||| |||||  || ||||| ||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||| ||||     
T  1255634 agatacaagagctacataggttttgaggaatgttgatcaattagggggttatagacattacagttgattataacatttttagcttttttgatagcagata 1255733  T
Q  344 aataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcg 443  Q
     ||||||||| ||||||||||| |||||||| ||||||||| |||||||||| |||||| || ||||| ||| |||||||| |||||||||||||||||     
T  1255734 cataaataaatgtcaaatactacgatatctt-gttttagaactttttctaataaaataacttgctcaagttaaatgcttatatatgtattttgattttca 1255832  T
Q  444 ttttagaccgtctatagataatttaacatatat---gtagctgtgtcggtgtcctatattttttacattagcggtgtcga 520  Q
    |||||||||||||| | |||| |||||||||||   ||||| |||||||||||| |||||||||||| || | |||||||    
T  1255833 ttttagaccgtctacaaataaattaacatatatgtagtagcggtgtcggtgtcccatattttttacactaacagtgtcga 1255912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 230 - 520
Target Start/End: Complemental strand, 57201 - 56923
Alignment:
Q  230 gcttctacatatcgcagatacaagagttacatgtgtgttgagaaatgtagatcaattag-gggttatagacattaaagttgattataacatttttagctt 328  Q
    ||||| ||||| || ||||||||||||||||| ||| | ||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||| |||    
T  57201 gcttccacataccgtagatacaagagttacatatgtttggagaaatgttgatcaactagagggttatagacattaaagttgattataacatttttacctt 57102  T
Q  329 tcttgatagtagatgaataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtat 428  Q
    | ||||||||||||||||||            |||||| |||||||  | ||||||  |||||||||||||||| || ||||| ||||||||||||| ||    
T  57101 ttttgatagtagatgaataa------------tactattatatctta-tattagaacattttctaatgaaataagttgctcaagttagatgcttatgaat 57015  T
Q  429 gtattttgattttcgttttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcga 520  Q
     |||||| ||||||| |||||||||||||||||||| |||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||    
T  57014 atattttaattttcgatttagaccgtctatagataaattaacatatatgtagcggtgttcgtgtcctatattttttatattagcggtgtcga 56923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 305 - 520
Target Start/End: Complemental strand, 19294512 - 19294300
Alignment:
Q  305 agttgattataacattttt-agctttcttgatagtagatgaataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaa 403  Q
    ||||||||||| ||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||| |||   ||| ||||||||||||||||||    
T  19294512 agttgattatatcattttttagcttttttcatagtagatgaataaataaaggtcaaatactatgatatctt-gtt---gaactttttctaatgaaataaa 19294417  T
Q  404 tttctcaacttagatgcttatgtatgtattttgattttcgttttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttt 503  Q
    || || || ||||||| |||| |||||||||| |||| | ||||||||||||| || |||| |||||||||||||||| || ||||||||||||||||||    
T  19294416 ttgcttaagttagatgtttatatatgtattttaatttccattttagaccgtctttaaataaattaacatatatgtagcggtatcggtgtcctatattttt 19294317  T
Q  504 tacattagcggtgtcga 520  Q
    |||||||||||||||||    
T  19294316 tacattagcggtgtcga 19294300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 334 - 521
Target Start/End: Complemental strand, 34709028 - 34708842
Alignment:
Q  334 atagtagatgaataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtatt 433  Q
    ||||||||||||||||||||||||||||||||||||||||| |||  |||| |||||||||||||||||||||||||| ||||||| |||| ||||||||    
T  34709028 atagtagatgaataaataaaggtcaaatactatgatatctt-gttggagaactttttctaatgaaataaatttctcaagttagatgtttatatatgtatt 34708930  T
Q  434 ttgattttcgttttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcgac 521  Q
    || |||||  ||||||||  ||| || |||| |||||||||| |||| |||||||||||||||||||| |||||||| |||| |||||    
T  34708929 ttaattttaattttagactatctttaaataaattaacatatacgtagatgtgtcggtgtcctatatttcttacattaacggtatcgac 34708842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 346 - 524
Target Start/End: Complemental strand, 34013625 - 34013448
Alignment:
Q  346 taaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgtt 445  Q
    |||||||| |||||||||||||||||||| ||| ||||| ||||| | |||| ||||||| ||| | ||||||| |||| |||||||||| ||||||  |    
T  34013625 taaataaatgtcaaatactatgatatctt-gttgtagaactttttatgatgacataaattgctcgagttagatgtttatatatgtattttaattttcact 34013527  T
Q  446 ttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcgacgtg 524  Q
    |||||| |||| || |||| |||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||    
T  34013526 ttagacggtctttaaataaattaacatataagtaacggtgtcggtgtcctatattttttacattagcggtgtcgacgtg 34013448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 346 - 524
Target Start/End: Original strand, 34011225 - 34011402
Alignment:
Q  346 taaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgtt 445  Q
    |||||||| |||||||||||||||||||| ||| ||||| ||||| | |||| ||||||| ||| | ||||||| |||| |||||||||| ||||||  |    
T  34011225 taaataaatgtcaaatactatgatatctt-gttgtagaactttttatgatgacataaattgctcgagttagatgtttatatatgtattttaattttcact 34011323  T
Q  446 ttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcgacgtg 524  Q
    |||||| |||| || |||| |||||||||| ||| | |||||||||||||||||||||||||||||||| |||||||||    
T  34011324 ttagacggtctttaaataaattaacatataagtaacggtgtcggtgtcctatattttttacattagcggcgtcgacgtg 34011402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 268 - 524
Target Start/End: Complemental strand, 2602255 - 2602001
Alignment:
Q  268 tgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatgaataaataaaggtcaaatactatg 367  Q
    |||||||||| |||||| ||||| ||||| |||||||||||||||| ||||  ||||  ||| | ||||||| ||| |||||||||||  |||||||||     
T  2602255 tgagaaatgttgatcaactagggtttataaacattaaagttgattacaacacatttaaatttttcgatagtacatggataaataaagggtaaatactatt 2602156  T
Q  368 atatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgttttagaccgtctatagataattt 467  Q
     |||| ||||| || |  ||||||||||||| |||  | || || |||||||| ||||| |||||||||||| |   |||||| | | |||| |||| ||    
T  2602155 gtatc-ttgttatatacctttttctaatgaagtaatctgct-aagttagatgcatatgtttgtattttgattcttaatttagatcttttataaataaatt 2602058  T
Q  468 aacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcgacgtg 524  Q
    || ||||| ||||  |||||||||||| |  |||||||||||| | |||||||||||    
T  2602057 aatatataggtagaggtgtcggtgtccgaggttttttacattaacagtgtcgacgtg 2602001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 438
Target Start/End: Original strand, 33234871 - 33235016
Alignment:
Q  287 aggggttatagacattaaagttgattataacatttttagctttcttgatagtagatgaataaataaaggtcaaatactatgatatctttgttttagaaat 386  Q
    ||||||||||||||||||||||||||| |||||||| |  ||| | ||||||||||| |||||| |||||||||||||||  |||| ||||| || |||     
T  33234871 aggggttatagacattaaagttgattacaacattttgaaattt-tcgatagtagatggataaat-aaggtcaaatactattgtatc-ttgttata-aaac 33234966  T
Q  387 ttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgat 438  Q
    |||| |||||||||||||| ||||| ||||||||  ||||||||||||||||    
T  33234967 ttttttaatgaaataaattgctcaagttagatgc--atgtatgtattttgat 33235016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 418 - 499
Target Start/End: Original strand, 12790562 - 12790643
Alignment:
Q  418 tgcttatgtatgtattttgattttcgttttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatat 499  Q
    ||||||| |||||| |||||||||| ||||||| ||| |||| |||| |||||||||||||||| |||||||||||||||||    
T  12790562 tgcttatatatgtaatttgattttcattttagatcgtatataaataaattaacatatatgtagcggtgtcggtgtcctatat 12790643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 245 - 322
Target Start/End: Complemental strand, 34709141 - 34709064
Alignment:
Q  245 agatacaagagttacatgtgtgttgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttt 322  Q
    ||||| |||||||| || | | |||| |||||| |||||||||||||||||| |||||| ||||||||||| ||||||    
T  34709141 agatataagagttatatatattttgaaaaatgttgatcaattaggggttatatacattatagttgattatatcatttt 34709064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 19294614 - 19294549
Alignment:
Q  149 ggtgtccgacacctatatagcactcatatgagtcttgttggacaattcagacaaatatctaaaaca 214  Q
    |||||||||||||| |||| |||||||| ||| | ||| |||||| ||| ||||||||||||||||    
T  19294614 ggtgtccgacacctgtataacactcatacgagccgtgtcggacaagtcacacaaatatctaaaaca 19294549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 14494316 - 14494381
Alignment:
Q  149 ggtgtccgacacctatatagcactcatatgagtcttgttggacaattcagacaaatatctaaaaca 214  Q
    ||||||||||||||||||| |||| ||| ||| | ||| |||||| ||| |||||||||| |||||    
T  14494316 ggtgtccgacacctatataacactaatacgagccgtgtcggacaactcacacaaatatcttaaaca 14494381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 313
Target Start/End: Complemental strand, 17261760 - 17261715
Alignment:
Q  268 tgagaaatgtagatcaattaggggttatagacattaaagttgatta 313  Q
    |||||||||| ||||||| |||||||||  ||||||||||||||||    
T  17261760 tgagaaatgttgatcaatgaggggttatgtacattaaagttgatta 17261715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 3e-83; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 231 - 518
Target Start/End: Complemental strand, 11410887 - 11410600
Alignment:
Q  231 cttctacatatcgcagatacaagagttacatgtgtgttgagaaatgtagatcaattaggggtta-tagacattaaagttgattataacatttttagcttt 329  Q
    |||| ||||| || ||||||||||||||||| ||| ||||||||||| ||||||||||||| || |||| ||||  ||||||||||||| ||||||| ||    
T  11410887 cttccacataccgtagatacaagagttacatatgttttgagaaatgttgatcaattagggggtaatagatattattgttgattataacagttttagcctt 11410788  T
Q  330 cttgatagtagatgaataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatg 429  Q
     |||||||||||||||||||||||||| |||||||| ||||||||  |||||||| ||||||||||||||||| || ||||| |||||||||||  ||||    
T  11410787 tttgatagtagatgaataaataaaggttaaatactacgatatcttc-ttttagaactttttctaatgaaataacttgctcaagttagatgcttaaatatg 11410689  T
Q  430 tattttgattttcgttttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtc 518  Q
    ||||||||||||| ||||||||||| |||| |||| |||||||||||||||| ||||||||||||||||| ||||||| ||||||||||    
T  11410688 tattttgattttcattttagaccgtatataaataaattaacatatatgtagcggtgtcggtgtcctatatattttacactagcggtgtc 11410600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 245 - 520
Target Start/End: Original strand, 43921916 - 43922190
Alignment:
Q  245 agatacaagagttacatgtgtgttgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatga 344  Q
    ||||||||||||||||| ||| ||||||||||| ||||||| |||| | || ||||||| | ||||||||||||||||||||||| |||||| |||||||    
T  43921916 agatacaagagttacatatgttttgagaaatgttgatcaatcagggttaattgacattacaattgattataacatttttagcttttttgatattagatga 43922015  T
Q  345 ataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgt 444  Q
    |||||||||| |||||||||| ||| || ||||||||||| ||||||||||||||||| || ||||| ||||||| ||   |||||||||| |||||| |    
T  43922016 ataaataaagatcaaatactacgatgtc-ttgttttagaactttttctaatgaaataacttgctcaagttagatgtttggatatgtatttttattttcat 43922114  T
Q  445 tttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcga 520  Q
     ||||||| | |||| |||| ||||||| |||||||  ||||||||||||||||||||||||| ||||||||||||    
T  43922115 gttagaccatatataaataaattaacatgtatgtagaggtgtcggtgtcctatattttttacactagcggtgtcga 43922190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 257 - 518
Target Start/End: Original strand, 21408844 - 21409105
Alignment:
Q  257 tacatgtgtgttgagaaatgtagatcaattaggggttat-agacattaaagttgattataacatttttagctttcttgatagtagatgaataaataaagg 355  Q
    ||||| ||| ||||||||||| ||||||||||||| ||  | |||||| | |||||||||||||||||| | || || ||||||||||||||||||||||    
T  21408844 tacatatgttttgagaaatgttgatcaattagggggtaacaaacattacaattgattataacatttttaaccttttttatagtagatgaataaataaagg 21408943  T
Q  356 tcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgttttagaccgtc 455  Q
    |||||||||| ||||||||  |||||||| ||||||||||||||||| || ||||| |||||| ||||| | ||||||||||||||| |||||||||||     
T  21408944 tcaaatactacgatatctta-ttttagaattttttctaatgaaataacttgctcaaattagattcttatatttgtattttgattttcattttagaccgta 21409042  T
Q  456 tatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtc 518  Q
    |||| |||| |||||||||||||||| ||||| || ||||||||||||||||||| |||||||    
T  21409043 tataaataaattaacatatatgtagcggtgtcagtatcctatattttttacattaacggtgtc 21409105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 245 - 520
Target Start/End: Complemental strand, 27063930 - 27063655
Alignment:
Q  245 agatacaagagttacatgtgtgttgagaaatgtagatcaatt-aggggttatagacattaaagttgattataacatttttagctttcttgatagtagatg 343  Q
    ||||| ||||||||||| | ||||||||||||| |||||||| ||| |||||||| ||| ||||| |||| |||||||||||||||  ||| ||||||||    
T  27063930 agatataagagttacatatatgttgagaaatgttgatcaatttaggagttatagaaatttaagttaattacaacatttttagcttttatgacagtagatg 27063831  T
Q  344 aataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcg 443  Q
    ||||||||||||||| ||| |||| |||||| |||||||||  |||| ||| |||||||| | ||||| |||||||||||  ||||| |||||||| ||     
T  27063830 aataaataaaggtcatatattatggtatctt-gttttagaacgttttttaaagaaataaactgctcaagttagatgcttaaatatgtgttttgattatca 27063732  T
Q  444 ttttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcga 520  Q
    |||||||||||||||| |||| |||| ||||||||| | ||||   || ||||||||||||||||||| | ||||||    
T  27063731 ttttagaccgtctataaataaattaatatatatgtaccggtgtttatgccctatattttttacattagagatgtcga 27063655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 157 - 520
Target Start/End: Complemental strand, 26565577 - 26565226
Alignment:
Q  157 acacctatatagcactcatatgagtcttgttggacaattcagacaaatatctaaaacannnnnnnnctttctcgcttctacatatcgcagatacaagagt 256  Q
    ||||||||||| |||||||| ||| | ||| |||||| ||||||||||||||||||||        || ||| ||||| |||||||  ||||| ||||||    
T  26565577 acacctatataacactcatacgagccgtgtcggacaactcagacaaatatctaaaacattttttt-ctctcttgcttccacatatcttagatataagagt 26565479  T
Q  257 tacatgtgtgttgagaaatgtagatcaattaggg-gttatagacattaaagttgattataacatttttagc-tttcttgatagtagatgaataaataaag 354  Q
    ||||| ||| || |||||||| ||||| |||||| || |||||||||| |||| ||||||||||||||||| ||| ||||  ||| ||||  ||||||||    
T  26565478 tacatatgtttttagaaatgttgatcatttagggagtaatagacattacagttaattataacatttttagccttttttgacggtaaatgagaaaataaag 26565379  T
Q  355 gtcaaatactatgatatctttgttttagaaat-ttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgttttagaccg 453  Q
     |||||||||| |||||||| |||||| |  | |||||           |||| |||  |||||| | ||| ||||||||||||||||| |||||||||     
T  26565378 atcaaatactacgatatctt-gttttatatgtattttc-----------attt-tcattttagat-cgtatatatgtattttgattttcattttagacca 26565293  T
Q  454 tctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcga 520  Q
    | |||| |||| |||||||||||||| | ||||| ||||||| ||||||||||||||||||||||||    
T  26565292 tatataaataaattaacatatatgtaacggtgtcagtgtcctgtattttttacattagcggtgtcga 26565226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 245 - 430
Target Start/End: Original strand, 10516138 - 10516323
Alignment:
Q  245 agatacaagagttacatgtgtgttgagaaatgtagatcaattaggggtta-tagacattaaagttgattataacatttttagctttcttgatagtagatg 343  Q
    ||||||||||||||||| ||| || | ||||||  |||||||||||| || || |||||| || | ||||||||||||||| | || ||||||| || ||    
T  10516138 agatacaagagttacatatgttttaaaaaatgttaatcaattagggggtaatatacattatagcttattataacatttttaacctttttgataggagttg 10516237  T
Q  344 aataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgt 430  Q
    ||||||||| |||||||||||| |||||| || |||||||| ||||||||||||||||| || ||||| ||| |||||||| |||||    
T  10516238 aataaataatggtcaaatactacgatatc-ttattttagaactttttctaatgaaataacttgctcaagttatatgcttatctatgt 10516323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 246 - 521
Target Start/End: Original strand, 17715817 - 17716092
Alignment:
Q  246 gatacaagagttacatgtgtgttgagaaatgtagatcaatta-ggggttatagacattaaagttgattataacatttttagc-tttcttgatagtagatg 343  Q
    |||||||||||||||| |||||||| ||||||  |||||||| ||||||||||| |||||||||||||| ||  ||||| || ||| || ||| ||||||    
T  17715817 gatacaagagttacatatgtgttgataaatgtgtatcaattatggggttatagaaattaaagttgattacaatgtttttggcttttttttataatagatg 17715916  T
Q  344 aataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgc---ttatgtatgtattttgattt 440  Q
    ||||||||||||||||||  |||  |||| |||||||||||  ||||  ||| |||||||||   ||| |||  | |   ||||||||||||||||||||    
T  17715917 aataaataaaggtcaaattttatcgtatc-ttgttttagaacctttttcaattaaataaatt--gcaagttaagttcttattatgtatgtattttgattt 17716013  T
Q  441 tcgttttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcgac 521  Q
     | |||||||   | | || |||| |||  ||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  17716014 gcattttaga--ttatctaaataaattagtatatatgtagcggtgtcagtgtcctatattatttacattagcggtgtcgac 17716092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 246 - 521
Target Start/End: Original strand, 19017046 - 19017321
Alignment:
Q  246 gatacaagagttacatgtgtgttgagaaatgtagatcaatta-ggggttatagacattaaagttgattataacatttttagc-tttcttgatagtagatg 343  Q
    |||||||||||||||| |||||||| ||||||  |||||||| ||||||||||| |||||||||||||| ||  ||||| || ||| || ||| ||||||    
T  19017046 gatacaagagttacatatgtgttgataaatgtgtatcaattatggggttatagaaattaaagttgattacaatgtttttggcttttttttataatagatg 19017145  T
Q  344 aataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgc---ttatgtatgtattttgattt 440  Q
    ||||||||||||||||||  |||  |||| |||||||||||  ||||  ||| |||||||||   ||| |||  | |   ||||||||||||||||||||    
T  19017146 aataaataaaggtcaaattttatcgtatc-ttgttttagaacctttttcaattaaataaatt--gcaagttaagttcttattatgtatgtattttgattt 19017242  T
Q  441 tcgttttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcgac 521  Q
     | |||||||   | | || |||| |||  ||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  19017243 gcattttaga--ttatctaaataaattagtatatatgtagcggtgtcagtgtcctatattatttacattagcggtgtcgac 19017321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 245 - 430
Target Start/End: Original strand, 10657411 - 10657595
Alignment:
Q  245 agatacaagagttacatgtgtgttgagaaatgtagatcaattaggggttatag-acattaaagttgattataacatttttagctttcttgatagtagatg 343  Q
    |||||||||| |||||| ||| |||| |||||| |||||||||| || || |  |||||| |  ||||||||||||||||| |||| |||| || || ||    
T  10657411 agatacaagatttacatatgttttgaaaaatgttgatcaattagaggctaaaatacattacatatgattataacatttttaacttttttga-aggagttg 10657509  T
Q  344 aataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgt 430  Q
    ||||||||||||||||||  || |||||||| ||||||||| |||||||||| |||||| || || || ||| |||||||| |||||    
T  10657510 aataaataaaggtcaaattatacgatatctt-gttttagaactttttctaataaaataacttacttaagttatatgcttatctatgt 10657595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 426 - 518
Target Start/End: Original strand, 27111149 - 27111242
Alignment:
Q  426 tatgtattttgattttcgttttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatatttttt-acattagcggtgtc 518  Q
    ||||||||||||||||| ||||||||||| |||| |||| ||||||||||||||   |||||||||||||||||||||| ||| ||||||||||    
T  27111149 tatgtattttgattttcattttagaccgtttataaataaattaacatatatgtaatggtgtcggtgtcctatattttttaacactagcggtgtc 27111242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 230 - 356
Target Start/End: Complemental strand, 14218604 - 14218476
Alignment:
Q  230 gcttctacatatcgcagatacaagagttacatgtgtgttgagaaatgtagatcaattaggggtta-tagacattaaagttgattataacatttttag-ct 327  Q
    ||||| ||||| || ||| |||||||| |||| | | |||| |||||| ||||||||||||| || ||||||||| |||||||||||||||||||||  |    
T  14218604 gcttccacataccgtagacacaagagtcacatatattttgataaatgttgatcaattagggggtaatagacattacagttgattataacatttttagttt 14218505  T
Q  328 ttcttgatagtagatgaataaataaaggt 356  Q
    || || ||||||||| |||||||||||||    
T  14218504 ttttttatagtagataaataaataaaggt 14218476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 269 - 362
Target Start/End: Complemental strand, 29697116 - 29697023
Alignment:
Q  269 gagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatgaataaataaaggtcaaata 362  Q
    ||||||||| | ||||  ||||||||||||||||||| |||||| ||||||||||||||||   ||||| ||||| |||||||||| |||||||    
T  29697116 gagaaatgttgttcaaggaggggttatagacattaaaattgattctaacatttttagcttttacgatagcagatgtataaataaagctcaaata 29697023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 392
Target Start/End: Original strand, 2227280 - 2227340
Alignment:
Q  331 ttgatagtagatgaataaataaaggtcaaatactatgatatctttgttttagaaatttttct 392  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||| ||||| |||||||    
T  2227280 ttgatagtagatgaataaataaaggtcaaatactatgacatc-ttgttgtagaactttttct 2227340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 390
Target Start/End: Complemental strand, 49860546 - 49860462
Alignment:
Q  305 agttgattataacatttttagctttcttgatagtagatgaataaataaaggtcaaatactatgatatctttgttttagaaattttt 390  Q
    |||||||||||| |||||||||| | |||||||||||| |||||||||| ||||||||| |  ||||| ||||||||||| |||||    
T  49860546 agttgattataagatttttagctcttttgatagtagataaataaataaatgtcaaataccactatatc-ttgttttagaacttttt 49860462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 414 - 507
Target Start/End: Complemental strand, 14218476 - 14218381
Alignment:
Q  414 tagatgcttatgtatgtattttgattttcgttttagaccgtctatagataatttaacatat--atgtagctgtgtcggtgtcctatattttttaca 507  Q
    |||||| | |||||||||||||||||||| ||||||| | | |||| |||| |||||||||  ||||||| ||||| | ||||||||| |||||||    
T  14218476 tagatggtgatgtatgtattttgattttcattttagatcttatataaataaattaacatatacatgtagcagtgtcagagtcctatatcttttaca 14218381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 464
Target Start/End: Complemental strand, 49860459 - 49860407
Alignment:
Q  412 cttagatgcttatgtatgtattttgattttcgttttagaccgtctatagataa 464  Q
    ||||||||||||||||||||||||||||||| ||||||| | |||||| ||||    
T  49860459 cttagatgcttatgtatgtattttgattttcattttagatcatctataaataa 49860407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 521
Target Start/End: Original strand, 2227457 - 2227488
Alignment:
Q  490 tgtcctatattttttacattagcggtgtcgac 521  Q
    ||||||||||||||||||||||||||||||||    
T  2227457 tgtcctatattttttacattagcggtgtcgac 2227488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 530
Target Start/End: Original strand, 32706375 - 32706430
Alignment:
Q  475 atgtagctgtgtcggtgtcctatattttttacattagcggtgtcgacgtgccagtg 530  Q
    ||||||| |||| ||||||||||||||||||||||||| || |||| ||| |||||    
T  32706375 atgtagcagtgttggtgtcctatattttttacattagcagtctcgaggtgtcagtg 32706430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 304
Target Start/End: Complemental strand, 49861174 - 49861099
Alignment:
Q  230 gcttctacatatcgcagatacaagagttacatgtgtgttgagaaatgtagatcaatta-ggggttatagacattaa 304  Q
    ||||||||| | || |||||||||||||||||  || |||||| |||| ||||||||| ||||| |||||||||||    
T  49861174 gcttctacacaccgtagatacaagagttacataagttttgagatatgttgatcaattagggggtcatagacattaa 49861099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 383
Target Start/End: Original strand, 27109376 - 27109424
Alignment:
Q  334 atagtagatgaataaataaaggtcaaatactatgatatctttgttttaga 383  Q
    |||||||||||||||||||| ||||||||||| ||| || ||||||||||    
T  27109376 atagtagatgaataaataaatgtcaaatactacgatttc-ttgttttaga 27109424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 490
Target Start/End: Original strand, 27109420 - 27109497
Alignment:
Q  413 ttagatgcttatgtatgtattttgattttcgttttagaccgtctatagataatttaacatatatgtagctgtgtcggt 490  Q
    |||||||||||| |||||||||| |||||  ||||||||||||| || ||||  |||  |||||||| | ||||||||    
T  27109420 ttagatgcttatatatgtatttttatttttattttagaccgtctgtaaataaactaagttatatgtatcggtgtcggt 27109497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 383
Target Start/End: Original strand, 27109774 - 27109822
Alignment:
Q  334 atagtagatgaataaataaaggtcaaatactatgatatctttgttttaga 383  Q
    ||||||||||||||||||||| ||||||||||  ||||| ||||||||||    
T  27109774 atagtagatgaataaataaagatcaaatactacaatatc-ttgttttaga 27109822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 10515952 - 10516012
Alignment:
Q  69 actcctatgacacttgtacgatagttgtaggacaactaagaccagtgtcatagataaaatt 129  Q
    ||||||||||||||||| |||||  ||| |||||||||| | ||||||| || ||||||||    
T  10515952 actcctatgacacttgtccgatacgtgttggacaactaaaatcagtgtcttaaataaaatt 10516012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 519
Target Start/End: Original strand, 44613364 - 44613400
Alignment:
Q  483 gtgtcggtgtcctatattttttacattagcggtgtcg 519  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  44613364 gtgtcggtgtcctatatttttgacattagcagtgtcg 44613400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 154; Significance: 2e-81; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 287 - 524
Target Start/End: Complemental strand, 9929778 - 9929542
Alignment:
Q  287 aggggttatagacattaaagttgattataacatttttagctttcttgatagtagatgaataaataaaggtcaaatactatgatatctttgttttagaaat 386  Q
    ||||||||||||||||| ||||||| ||| |||||| ||| || |||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |    
T  9929778 aggggttatagacattacagttgatcatatcattttgagcatttttgatagtagatgaataaataaaggtcaaatactatgatatctt-gttgtagaact 9929680  T
Q  387 ttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgttttagaccgtctatagataatttaacatatatgtagctgtgt 486  Q
    ||||||||||||||||||| ||||| ||||||| |||| |||||||||| |||||| ||||||||||||| || |||| |||||||||||||||| ||||    
T  9929679 ttttctaatgaaataaattgctcaaattagatgtttatatatgtattttaattttcattttagaccgtctttaaataaattaacatatatgtagcagtgt 9929580  T
Q  487 cggtgtcctatattttttacattagcggtgtcgacgtg 524  Q
     |||||||||||||||||||||||||||||||||||||    
T  9929579 tggtgtcctatattttttacattagcggtgtcgacgtg 9929542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 245 - 524
Target Start/End: Complemental strand, 26576250 - 26575978
Alignment:
Q  245 agatacaagagttacatgtgtgttgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatga 344  Q
    ||||||||||||||||| ||| ||||||||||| |||| ||||| |||||||||||||| ||||||||||| | ||||||||||  ||||||||||||||    
T  26576250 agatacaagagttacatatgttttgagaaatgttgatcgattagtggttatagacattatagttgattatatcgtttttagcttatttgatagtagatga 26576151  T
Q  345 ataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgt 444  Q
    |||||||||||||||||||||||||||| ||||| ||||| |||||||||||| ||||||| ||||| ||||||| |||| |||||||||| |||||| |    
T  26576150 ataaataaaggtcaaatactatgatatc-ttgttgtagaactttttctaatgacataaattgctcaagttagatgtttatatatgtattttaattttcat 26576052  T
Q  445 tttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcgacgtg 524  Q
    |||||| ||||| || |||| |||| |||||||||       ||||||||||||||||||||||||||||||||||||||    
T  26576051 tttagatcgtctttaaataaattaaaatatatgta------acggtgtcctatattttttacattagcggtgtcgacgtg 26575978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 245 - 510
Target Start/End: Complemental strand, 27004227 - 27003960
Alignment:
Q  245 agatacaagagttacatgtgtgttgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgat---agtaga 341  Q
    |||||||||||||  || ||| |||| |||||| |||||||||||||||||  |||||| ||||||||||| ||||||||| ||| ||  |   ||||||    
T  27004227 agatacaagagttgtatatgttttgaaaaatgttgatcaattaggggttatgtacattatagttgattatatcatttttagtttttttttttacagtaga 27004128  T
Q  342 tgaataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgatttt 441  Q
    ||||||||||||||||||||||||||||||||| |||  |||| ||||| |||||||||||||||||||| ||||||| |||| ||||||||||  ||||    
T  27004127 tgaataaataaaggtcaaatactatgatatctt-gttggagaactttttttaatgaaataaatttctcaagttagatgtttatatatgtattttagtttt 27004029  T
Q  442 cgttttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacatta 510  Q
    | ||||||||||||| || |||| |||||||||| ||||| ||||||||||||||||||||||||||||    
T  27004028 cattttagaccgtctttaaataaattaacatatacgtagcggtgtcggtgtcctatattttttacatta 27003960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 319 - 524
Target Start/End: Original strand, 32200870 - 32201074
Alignment:
Q  319 tttttagctttcttgatagtagatgaataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagat 418  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||| ||||||| ||||| ||||||    
T  32200870 tttttagcttttttgatagtagatgaataaataaaggtcaaatactatgatatctt-gttgtagaactttttctaatgacataaattgctcaagttagat 32200968  T
Q  419 gcttatgtatgtattttgattttcgttttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtc 518  Q
    | |||| |||||||||| |||||| ||||||||||||| || |||| ||||||||||| ||   ||||||||||||||||||||||||||||||||||||    
T  32200969 gtttatatatgtattttaattttcattttagaccgtctttaaataaattaacatatatttaatggtgtcggtgtcctatattttttacattagcggtgtc 32201068  T
Q  519 gacgtg 524  Q
    ||||||    
T  32201069 gacgtg 32201074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 245 - 520
Target Start/End: Original strand, 34409554 - 34409830
Alignment:
Q  245 agatacaagagttacatgtgtgttgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttct-tgatagtagatg 343  Q
    ||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||| | |||  ||||||     
T  34409554 agatacaagagttacatatgttttgagaaatgttgatcaattaggggttatagacattatagttgattatatcatttttagctttttctgacggtagata 34409653  T
Q  344 aataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttga-ttttc 442  Q
    ||||||||||||||||||||||| ||||| ||||| ||||| ||||||||||| | |||||| ||||| ||||||| |||| |||||||||| | ||||     
T  34409654 aataaataaaggtcaaatactataatatc-ttgttgtagaactttttctaatg-actaaattgctcaagttagatgtttatatatgtattttaatttttt 34409751  T
Q  443 gttttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctata-ttttttacattagcggtgtcga 520  Q
     |||| ||||||||||| |||| |||| |||||| ||   |||||||||||||| | ||||||||||||||||||||||    
T  34409752 attttggaccgtctataaataaattaatatatatctaatggtgtcggtgtcctagatttttttacattagcggtgtcga 34409830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 251 - 517
Target Start/End: Original strand, 44649945 - 44650202
Alignment:
Q  251 aagagttacatgtgtgttgagaaatgtagatcaattagggg-ttatagacattaaagttgattataacatttttagctttcttgatagtagatgaataaa 349  Q
    |||||||| || |||||||| |||||| ||||||||||||| ||||||| |||||||||||||| |||||||||| |||| |||||||||||||||||||    
T  44649945 aagagttatatatgtgttgaaaaatgttgatcaattaggggcttatagaaattaaagttgattacaacatttttaacttttttgatagtagatgaataaa 44650044  T
Q  350 taaaggtcaaatactatgatatctttgttttagaaatttttct-aatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgtttta 448  Q
    |||||||||||| ||||| |||| |||||||| || ||||| | ||||||||||||| ||||| ||| |||||||||||||||          | |||||    
T  44650045 taaaggtcaaattctatggtatc-ttgttttataattttttttcaatgaaataaattgctcaatttatatgcttatgtatgta----------catttta 44650133  T
Q  449 gaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgt 517  Q
    |||  | |||| |||| |||| ||||||||||| |||||  |||||||||||||||| |||| ||||||    
T  44650134 gactatttataaataaattaatatatatgtagcagtgtcaatgtcctatattttttatattaacggtgt 44650202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 300 - 523
Target Start/End: Complemental strand, 13037442 - 13037220
Alignment:
Q  300 attaaagttgattataacatttttagctttcttgatagtagatgaataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaa 399  Q
    |||| |||||| |||| | ||||||  ||| |||||||||||||||||||||||| ||||||||||||||||||| ||| ||||| |||||| ||||| |    
T  13037442 attatagttgactatatcgtttttaatttttttgatagtagatgaataaataaagatcaaatactatgatatctt-gttgtagaactttttcaaatgaca 13037344  T
Q  400 taaatttctcaacttagatgcttatgtatgtattttgattttcgttttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatat 499  Q
    |||||| ||||| ||||||| || | |||| ||||| |||||| |||||| | |||| || |||| |||||||||||||| |  ||||||| || |||||    
T  13037343 taaattgctcaagttagatgtttgtatatgcattttaattttcattttagcctgtctttaaataaattaacatatatgtaacgatgtcggtatcttatat 13037244  T
Q  500 tttttacattagcggtgtcgacgt 523  Q
    |||||||||| ||| |||| ||||    
T  13037243 tttttacattggcgatgtcaacgt 13037220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 245 - 448
Target Start/End: Original strand, 4748053 - 4748255
Alignment:
Q  245 agatacaagagttacatgtgtgttgagaaatgtagatcaattaggggttataga--cattaaagttgattataacatttttagctttcttgatagtagat 342  Q
    |||| ||||||||||||||||  || ||||||| ||||| | ||||||||||||  ||||||||||||||| | ||||||||| ||  |  |||| ||||    
T  4748053 agatccaagagttacatgtgt--tgtgaaatgttgatcactgaggggttatagagacattaaagttgattacagcatttttagtttgttcaatagaagat 4748150  T
Q  343 gaataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttc 442  Q
    ||||||||||||||||||||||||  || ||| ||||||||| |||||| ||||||||||||| ||||| ||||| |   |||||| |||||||||||||    
T  4748151 gaataaataaaggtcaaatactatcgtaactt-gttttagaactttttccaatgaaataaattgctcaagttagaagtacatgtatctattttgattttc 4748249  T
Q  443 gtttta 448  Q
     |||||    
T  4748250 atttta 4748255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 245 - 524
Target Start/End: Complemental strand, 17651447 - 17651170
Alignment:
Q  245 agatacaagagttacatgtgtgttgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatga 344  Q
    |||| ||||||||| | |||||| || |||||| ||||||  || |||||||||||||||||||||||| ||| | ||||  ||| |  ||||||||||     
T  17651447 agattcaagagttaaaggtgtgt-gaaaaatgttgatcaacgagaggttatagacattaaagttgattacaacgtatttaagtttttcaatagtagatgg 17651349  T
Q  345 ataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgt 444  Q
    ||||||||||| |||||| |||  || ||| ||| ||||| || || |||||||||||||| ||||| |||||||| ||||||||||||||| ||||       
T  17651348 ataaataaaggccaaatattattgtaactt-gttatagaacttcttgtaatgaaataaattgctcaagttagatgcatatgtatgtattttggtttttaa 17651250  T
Q  445 tttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcgacgtg 524  Q
    |||||| | | |||| |||| |||| |||||   ||| ||||| || |||||| ||||||| ||||||| ||||||||||    
T  17651249 tttagatcttatataaataaattaatatatagccagcggtgtcagtatcctatgttttttatattagcgatgtcgacgtg 17651170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 386 - 530
Target Start/End: Complemental strand, 41849068 - 41848924
Alignment:
Q  386 tttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgttttagaccgtctatagataatttaacatatatgtagctgtg 485  Q
    ||||| |||||||||||| | ||||| |||||| | |||||||||||||||||| ||  ||||||   | |||| |||| |||| |||||  |||| |||    
T  41849068 tttttttaatgaaataaagtgctcaagttagattcatatgtatgtattttgattctcaatttagatattttataaataaattaatatatagatagcggtg 41848969  T
Q  486 tcggtgtcctatattttttacattagcggtgtcgacgtgccagtg 530  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||    
T  41848968 tcggtgtcctatattttttacattagcggtgtcgatgtgtcagtg 41848924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 348 - 514
Target Start/End: Original strand, 16661253 - 16661418
Alignment:
Q  348 aataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgtttt 447  Q
    ||||||||| |||||||||  |||||| ||||||||| ||||| |||| ||||||||| ||||| |||||| |  ||||||||||| ||||| ||  |||    
T  16661253 aataaaggttaaatactatcctatctt-gttttagaactttttttaataaaataaattgctcaagttagatacacatgtatgtattctgattctcaattt 16661351  T
Q  448 agaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcgg 514  Q
    ||| | | |||| || | |||| ||||||||||| || ||||||||| || ||| ||||||||||||    
T  16661352 agatcttttatacatgaattaatatatatgtagcggtatcggtgtccaatgtttattacattagcgg 16661418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 471 - 520
Target Start/End: Original strand, 4748257 - 4748306
Alignment:
Q  471 atatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcga 520  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  4748257 atatatatagcagtgtcggtgtcctatattttttacattagcggtgtcga 4748306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 402 - 478
Target Start/End: Complemental strand, 40279879 - 40279805
Alignment:
Q  402 aatttctcaacttagatgcttatgtatgtattttgattttcgttttagaccgtctatagataatttaacatatatgt 478  Q
    |||| ||||| |||||||||||||||||| ||||||||||| ||||||||||||  || |||| |||||||||||||    
T  40279879 aattgctcaagttagatgcttatgtatgtcttttgattttcattttagaccgtc--taaataaattaacatatatgt 40279805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 245 - 326
Target Start/End: Original strand, 15990041 - 15990123
Alignment:
Q  245 agatacaagagttacatgtgtgttgagaaatgtagatcaa-ttaggggttatagacattaaagttgattataacatttttagc 326  Q
    ||||| ||||||||||| ||||||||||||||| || ||| || ||||||||||| ||||||||| || | ||||||||||||    
T  15990041 agatataagagttacatatgtgttgagaaatgttgaccaatttgggggttatagaaattaaagttaatcacaacatttttagc 15990123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 302
Target Start/End: Complemental strand, 13039165 - 13039011
Alignment:
Q  148 tggtgtccgacacctatatagcactcatatgagtcttgttggacaattcagacaaatatctaaaacannnnnnnnctttctcgcttctacatatcgcaga 247  Q
    ||||||||||||| | |||| |||||||||||||  |||  ||||  ||||||||||||||||||||         | ||| |||||  || | |  |||    
T  13039165 tggtgtccgacacatttataacactcatatgagttgtgtcagacagctcagacaaatatctaaaacaatttttttatctcttgcttccgcacaccataga 13039066  T
Q  248 tacaagagttacatgtgtgttgagaaatgtagatcaattaggggttatagacatt 302  Q
    |||||||||||||| |||  |||||||||| |||||||||| ||||||| |||||    
T  13039065 tacaagagttacatatgttatgagaaatgttgatcaattagtggttataaacatt 13039011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 34409459 - 34409524
Alignment:
Q  149 ggtgtccgacacctatatagcactcatatgagtcttgttggacaattcagacaaatatctaaaaca 214  Q
    ||||||||||||||||||| |||||||| ||||  ||||| |||| ||| |||| |||||||||||    
T  34409459 ggtgtccgacacctatataacactcatacgagttgtgttgaacaactcaaacaactatctaaaaca 34409524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 456 - 523
Target Start/End: Original strand, 18724894 - 18724962
Alignment:
Q  456 tatagataatttaacatatatgtagctgtgtcggtgtcctat-attttttacattagcggtgtcgacgt 523  Q
    |||| |||| |||| ||||| ||||| |||||||||||||||  |||||||||||| ||||||||||||    
T  18724894 tataaataaattaatatataggtagcggtgtcggtgtcctatggttttttacattatcggtgtcgacgt 18724962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 41849286 - 41849228
Alignment:
Q  146 actggtgtccgacacctatatagcactcatatgagtcttgttggacaattcagacaaat 204  Q
    |||||||||||||||||||||| |||| ||||||| | ||| |||||| ||| ||||||    
T  41849286 actggtgtccgacacctatataacacttatatgaggcgtgtcggacaactcaaacaaat 41849228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 17651536 - 17651476
Alignment:
Q  149 ggtgtccgacacctatatagcactcatatgagtcttgttggacaattcagacaaatatcta 209  Q
    |||||||||||| |||||| |||| ||||||| | ||| |||||| | |||||||||||||    
T  17651536 ggtgtccgacacttatataacacttatatgaggcgtgtcggacaacttagacaaatatcta 17651476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 439
Target Start/End: Original strand, 38783673 - 38783776
Alignment:
Q  335 tagtagatgaataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattt 434  Q
    ||||||||| ||||||||| |||||||| | |  |||||| ||| || || ||||| |||||||||||||| | | |  ||||||  |||||||||||||    
T  38783673 tagtagatggataaataaatgtcaaatattgttgtatctt-gttataaaactttttttaatgaaataaattgccctagatagatgtatatgtatgtattt 38783771  T
Q  435 tgatt 439  Q
    |||||    
T  38783772 tgatt 38783776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 148; Significance: 7e-78; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 245 - 524
Target Start/End: Complemental strand, 28421230 - 28420952
Alignment:
Q  245 agatacaagagttacatgtgtgttgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatga 344  Q
    ||||||||||||||||| | | ||||||||| | |||||||||| |||||||||||||| ||||||||||| | ||||||||||| ||||||||||||||    
T  28421230 agatacaagagttacatatattttgagaaatcttgatcaattagtggttatagacattatagttgattatatcgtttttagcttttttgatagtagatga 28421131  T
Q  345 ataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgt 444  Q
    |||||||||||||||||  ||||||||| ||||| || || |||||||||||| ||||||| ||||| ||| ||| |||| |||||||||| |||||| |    
T  28421130 ataaataaaggtcaaatcatatgatatc-ttgttgtaaaactttttctaatgacataaattgctcaagttaaatgtttatatatgtattttaattttcat 28421032  T
Q  445 tttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcgacgtg 524  Q
    |||||||||||| || |||| ||||||||||||||   |||||||||||||||||||| ||||||||||||||| |||||    
T  28421031 tttagaccgtctttaaataaattaacatatatgtaatggtgtcggtgtcctatattttctacattagcggtgtcaacgtg 28420952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 245 - 524
Target Start/End: Original strand, 15131941 - 15132218
Alignment:
Q  245 agatacaagagttacatgtgtgttgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatga 344  Q
    ||||||| ||||||||| ||| || |||||| | ||||||||||||||||||||||||| ||||||||||| ||||||||||||| | |||||||||| |    
T  15131941 agatacaggagttacatatgtttttagaaatattgatcaattaggggttatagacattatagttgattatatcatttttagctttttcgatagtagataa 15132040  T
Q  345 ataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgt 444  Q
    |||||||||| ||||||||||||||||| ||| | ||||| ||||| | ||| |||||||| ||||| |||||||  ||| |||||||||| |||||| |    
T  15132041 ataaataaagatcaaatactatgatatc-ttgctgtagaactttttatcatg-aataaattgctcaagttagatgtctatatatgtattttaattttcat 15132138  T
Q  445 tttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcgacgtg 524  Q
    |||| || |||| |  |||| |||||||||||||||| |||| |||||||||||| |||||||||||||||||| |||||    
T  15132139 tttaaactgtctttgaataaattaacatatatgtagcggtgttggtgtcctatatattttacattagcggtgtcaacgtg 15132218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 256 - 522
Target Start/End: Complemental strand, 44502469 - 44502204
Alignment:
Q  256 ttacatgtgtgttgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatgaataaataaagg 355  Q
    |||||| ||| ||||||||||| |||  |||||||||||||||||||| |||||||||||  ||||||| |||| ||||||| |||||||||||||||||    
T  44502469 ttacatatgttttgagaaatgttgattgattaggggttatagacattatagttgattatattatttttaacttttttgatagcagatgaataaataaagg 44502370  T
Q  356 tcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgttttagaccgtc 455  Q
    ||||||| ||||||||| ||||| ||||| ||||| | |||||||||||| ||||| ||| ||| |||| |||||||| |  ||||||||||||||  ||    
T  44502369 tcaaatagtatgatatc-ttgttgtagaactttttatgatgaaataaattgctcaagttaaatgtttatatatgtattctatttttcgttttagactttc 44502271  T
Q  456 tatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcgacg 522  Q
    | || |||| |||| ||||||||| | ||||||||||||||||||||||||||||||  ||||||||    
T  44502270 tttaaataaattaaaatatatgtaacagtgtcggtgtcctatattttttacattagcaatgtcgacg 44502204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 312 - 520
Target Start/End: Original strand, 15850496 - 15850703
Alignment:
Q  312 tataacatttttagctttcttgatagtagatgaataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaa 411  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||| |||||||| || ||||||||||||||||| || |||||    
T  15850496 tataacatttttagcttttttgatagtagatgaataaataaatgtcaaatactgtgatatc-ttgttttataactttttctaatgaaataatttgctcaa 15850594  T
Q  412 cttagatgcttatgtatgtattttgattttcgttttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattag 511  Q
     |||||| ||||| ||||||||||||||||| ||||||||  |||||| |||| |||| |||||  ||   ||||||||||||||||||||||||| ||     
T  15850595 attagatacttatatatgtattttgattttcattttagactatctataaataaattaatatatacataatggtgtcggtgtcctatattttttacactaa 15850694  T
Q  512 cggtgtcga 520  Q
    | |||||||    
T  15850695 cagtgtcga 15850703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 240 - 524
Target Start/End: Complemental strand, 1226250 - 1225967
Alignment:
Q  240 atcgcagatacaagagttacatgtgtgttgagaaatgtagatcaattaggggtt-atagacattaaagttgattataacatttttagctttcttgatagt 338  Q
    |||| |||||||||||||| || |||||||||||||||  ||||||||| |||| ||||| |||||||||||||| ||||||||||  ||| ||||||||    
T  1226250 atcgtagatacaagagttaaatatgtgttgagaaatgttaatcaattagaggtttatagaaattaaagttgattacaacatttttaaattt-ttgatagt 1226152  T
Q  339 agatgaataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgat 438  Q
    |||||||||||||||| ||||||||| || |||||| |||||| || |||||  ||||||||||||| || || ||| ||| |||  |||||||||||||    
T  1226151 agatgaataaataaagatcaaatactctggtatctt-gttttataacttttttcaatgaaataaattgcttaatttatatgtttacatatgtattttgat 1226053  T
Q  439 tttcgttttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcgacgtg 524  Q
    |||| ||||||||| |||||| |||| |||  |||||||| |  ||||| ||||| || || ||||| ||||  ||||||||||||    
T  1226052 tttcattttagaccctctataaataaattactatatatgtggtggtgtcagtgtcgtaaatattttatattaatggtgtcgacgtg 1225967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 318 - 510
Target Start/End: Complemental strand, 37855276 - 37855085
Alignment:
Q  318 atttttagctttcttgatagtagatgaataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttaga 417  Q
    ||||||| | || |||||||||||||||||||||||||| ||||||||| ||||||| |||  | || ||||||| |||||||||||||||||| |||||    
T  37855276 atttttaacctttttgatagtagatgaataaataaaggttaaatactattatatctt-gttgcataactttttctcatgaaataaatttctcaaattaga 37855178  T
Q  418 tgcttatgtatgtattttgattttcgttttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacatta 510  Q
    || |||| |||||||| | |||||  ||||||||||||| || |||| | |||||||||||||| ||||||||||||||||||||||||||||    
T  37855177 tgtttatatatgtattataatttttattttagaccgtctttaaataaatgaacatatatgtagcggtgtcggtgtcctatattttttacatta 37855085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 269 - 439
Target Start/End: Original strand, 18393548 - 18393717
Alignment:
Q  269 gagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatgaataaataaaggtcaaatactatga 368  Q
    ||||||||| ||||||| | ||||||||||||||||||||||||| ||| ||||||  ||| ||||||||||||| ||||||||||||||||||||||      
T  18393548 gagaaatgttgatcaatcaagggttatagacattaaagttgattacaacgtttttaaattttttgatagtagatggataaataaaggtcaaatactattt 18393647  T
Q  369 tatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgatt 439  Q
    |||| ||||| || || ||||| |||| |||||||||  |||| ||| |||| |||||||||||| |||||    
T  18393648 tatc-ttgttataaaactttttttaataaaataaattgttcaagttaaatgcatatgtatgtattatgatt 18393717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 246 - 520
Target Start/End: Original strand, 18603044 - 18603304
Alignment:
Q  246 gatacaagagttacatgtgtgttgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatgaa 345  Q
    |||||||||||||||| ||| ||||||||||| ||||||||||||   || ||||||| | ||||||||||||||||||||||| ||                 
T  18603044 gatacaagagttacatatgttttgagaaatgttgatcaattagggtgaattgacattacaattgattataacatttttagctttttt------------- 18603130  T
Q  346 taaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgtt 445  Q
    ||||||||| |||||||||| |||||| | |||||| || ||||||||||||||||| || || || ||||||| |||  ||||||||| ||||||  ||    
T  18603131 taaataaagatcaaatactacgatatcgt-gttttaaaactttttctaatgaaataacttgcttaagttagatgtttagatatgtatttggatttttatt 18603229  T
Q  446 ttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcga 520  Q
    ||||||    |||| |||| ||||||| |||||||  ||| ||||||||||||||||||||| || |||||||||    
T  18603230 ttagacatgatataaataaattaacatgtatgtagaggtgccggtgtcctatattttttacactaacggtgtcga 18603304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 272 - 517
Target Start/End: Complemental strand, 27401985 - 27401741
Alignment:
Q  272 aaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatgaataaataaaggtcaaatactatgatat 371  Q
    |||||| ||||||  ||||||||||||||||||||||||||| ||| |||||   | | |  |||||||||| ||||||||||| ||||| ||||  |||    
T  27401985 aaatgttgatcaacgaggggttatagacattaaagttgattacaacgtttttttttctttcaatagtagatggataaataaaggccaaattctattgtat 27401886  T
Q  372 ctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgttttagaccgtctatagataatttaaca 471  Q
    ||| ||| || || ||||| |||||||||||||| ||||| ||||||||  |||||| |||||||||| ||  || ||||  | |||| |||| |||| |    
T  27401885 ctt-gttatataactttttttaatgaaataaattgctcaagttagatgcagatgtatatattttgattctcaattgagacattttataaataaattaata 27401787  T
Q  472 tatatgtagctgtgtcggtgtcctatattttttacattagcggtgt 517  Q
    ||||  |||| || | || ||||||| |||||||||||||||||||    
T  27401786 tatagatagcggtattggcgtcctatgttttttacattagcggtgt 27401741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 524
Target Start/End: Complemental strand, 13097604 - 13097355
Alignment:
Q  268 tgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatgaataaataaaggtcaaatactatg 367  Q
    |||||||||| ||||||  || |||||| ||||||||||||||||| |||||||||   ||| |  |||||||||||||||||||     |||| | ||     
T  13097604 tgagaaatgttgatcaacaagaggttatggacattaaagttgattaaaacattttttaatttttcaatagtagatgaataaataa-----aaat-cgatc 13097511  T
Q  368 atatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgttttagaccgtctatagataattt 467  Q
    | ||  ||||| | ||| ||||| |||||||||||||| ||  | |||||||| |||||||||||||||||| ||  ||||||   | |||| |||| ||    
T  13097510 aaat-attgttatggaactttttttaatgaaataaattgcttgagttagatgcatatgtatgtattttgattctcaatttagatattttataaataaatt 13097412  T
Q  468 aacatatatg-tagctgtgtcggtgtccta-tattttttacattagcggtgtcgacgtg 524  Q
    |  ||||||| |||  |||||| ||||||| | |||||||||||||||||| |||||||    
T  13097411 a--atatatgatagtggtgtcgctgtcctatttttttttacattagcggtgccgacgtg 13097355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 411
Target Start/End: Original strand, 2889764 - 2889872
Alignment:
Q  302 taaagttgattataacatttttagctttcttgatagtagatgaataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaata 401  Q
    ||||||||| || ||| ||||||  ||| | ||||||||||| ||||||||||| ||||||||||  |||| ||||| ||||  ||||| ||||||||||    
T  2889764 taaagttgaatacaacgtttttaaatttttcgatagtagatggataaataaaggccaaatactattgtatc-ttgttatagacctttttttaatgaaata 2889862  T
Q  402 aatttctcaa 411  Q
    |||| |||||    
T  2889863 aattgctcaa 2889872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 411
Target Start/End: Complemental strand, 3145371 - 3145263
Alignment:
Q  302 taaagttgattataacatttttagctttcttgatagtagatgaataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaata 401  Q
    ||||||||| || ||| ||||||  ||| | ||||||||||| ||||||||||| ||||||||||  |||| ||||| ||||  ||||| ||||||||||    
T  3145371 taaagttgaatacaacgtttttaaatttttcgatagtagatggataaataaaggccaaatactattgtatc-ttgttatagacctttttttaatgaaata 3145273  T
Q  402 aatttctcaa 411  Q
    |||| |||||    
T  3145272 aattgctcaa 3145263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 461 - 521
Target Start/End: Complemental strand, 44508477 - 44508417
Alignment:
Q  461 ataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcgac 521  Q
    |||| ||||||| |||||||| ||||| ||||||||||||||||| |||| ||||||||||    
T  44508477 ataaattaacatttatgtagcggtgtctgtgtcctatattttttagattaacggtgtcgac 44508417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 211
Target Start/End: Original strand, 15131843 - 15131905
Alignment:
Q  149 ggtgtccgacacctatatagcactcatatgagtcttgttggacaattcagacaaatatctaaa 211  Q
    ||||||||||||||||||| ||||||||||||   ||| | |||| |||||||||||||||||    
T  15131843 ggtgtccgacacctatataacactcatatgagcagtgtcgaacaactcagacaaatatctaaa 15131905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 477 - 530
Target Start/End: Complemental strand, 3159798 - 3159745
Alignment:
Q  477 gtagctgtgtcggtgtcctatattttttacattagcggtgtcgacgtgccagtg 530  Q
    ||||| ||||||||||||||| |||||||||||||||||||  ||||| |||||    
T  3159798 gtagcagtgtcggtgtcctatgttttttacattagcggtgttaacgtgtcagtg 3159745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 418
Target Start/End: Complemental strand, 3159963 - 3159848
Alignment:
Q  302 taaagttgattataacatttttagctttcttgatagtagatgaataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaata 401  Q
    |||||||||||| ||| | ||||  ||| | |||| |||||| ||||||||||| ||||||||||  || | ||||| ||||  ||||| ||||||||||    
T  3159963 taaagttgattacaacgtgtttaaatttttcgatattagatggataaataaaggccaaatactattgtaac-ttgttatagacctttttttaatgaaata 3159865  T
Q  402 aatttctcaacttagat 418  Q
    |||| ||||| ||||||    
T  3159864 aattgctcaagttagat 3159848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 31772606 - 31772527
Alignment:
Q  270 agaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatgaataaa 349  Q
    |||||||| ||||||  ||||||||   |||||||||||||||| ||| ||||||||||| ||||  ||||||| |||||    
T  31772606 agaaatgttgatcaacaaggggttaccaacattaaagttgattacaacgtttttagcttttttgacggtagatggataaa 31772527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 426
Target Start/End: Complemental strand, 2796326 - 2796200
Alignment:
Q  302 taaagttgattataacatttttagctttcttgatagtagatgaataaataaaggtcaaatactatgatatctttgttttaga---aatttttctaatgaa 398  Q
    |||||||||||| ||| | ||||  ||| | ||||||||||| ||||||||||| ||||||||||  || | ||||| ||||     ||||| |||||||    
T  2796326 taaagttgattacaacgtatttaaatttttcgatagtagatggataaataaaggccaaatactattgtaac-ttgttatagaccttttttttttaatgaa 2796228  T
Q  399 ataaatttctcaacttagatgcttatgt 426  Q
    ||||||| ||||| |||||||| |||||    
T  2796227 ataaattgctcaagttagatgcatatgt 2796200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 439
Target Start/End: Complemental strand, 28867337 - 28867284
Alignment:
Q  386 tttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgatt 439  Q
    ||||| |||||||||||||| || || |||||||| ||| ||||||||||||||    
T  28867337 tttttttaatgaaataaattacttaagttagatgcatatatatgtattttgatt 28867284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 439
Target Start/End: Complemental strand, 28869900 - 28869847
Alignment:
Q  386 tttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgatt 439  Q
    ||||| ||||||||||||||  | || |||||||| ||||||||||||||||||    
T  28869900 tttttttaatgaaataaattatttaagttagatgcatatgtatgtattttgatt 28869847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 418
Target Start/End: Original strand, 2875441 - 2875524
Alignment:
Q  334 atagtagatgaataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagat 418  Q
    |||||||||| ||||||||||| ||||||||||  |||| ||||| || |  ||||| ||||||| |||||| ||||| ||||||    
T  2875441 atagtagatggataaataaaggccaaatactattgtatc-ttgttataaacctttttttaatgaactaaattgctcaagttagat 2875524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 489 - 517
Target Start/End: Original strand, 31119324 - 31119352
Alignment:
Q  489 gtgtcctatattttttacattagcggtgt 517  Q
    |||||||||||||||||||||||||||||    
T  31119324 gtgtcctatattttttacattagcggtgt 31119352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 146; Significance: 1e-76; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 230 - 503
Target Start/End: Original strand, 37338721 - 37338993
Alignment:
Q  230 gcttctacatatcgcagatacaagagttacatgtgtgttgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagcttt 329  Q
    ||||| ||||| || ||||||||||||||||| ||  ||||||||||| |||||||||||| || || |||||||||||||| |||||||||||| ||||    
T  37338721 gcttccacataccgtagatacaagagttacatatgctttgagaaatgttgatcaattagggattttaaacattaaagttgataataacatttttaacttt 37338820  T
Q  330 cttgatagtagatgaataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatg 429  Q
     |||||||||||||||||||||||||||||||||||||||||| |||||| | ||  |||||||||||||||| || ||||| |||||||||||| ||||    
T  37338821 tttgatagtagatgaataaataaaggtcaaatactatgatatc-ttgtttgataacattttctaatgaaataatttgctcaagttagatgcttatatatg 37338919  T
Q  430 tattttgattttcgttttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttt 503  Q
    |||||||||||||  ||||||| ||||||| |||| |||||||||||||| | ||| ||||||||| |||||||    
T  37338920 tattttgattttcaatttagactgtctataaataaattaacatatatgtaacggtgccggtgtcctgtattttt 37338993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 266 - 521
Target Start/End: Complemental strand, 27616494 - 27616239
Alignment:
Q  266 gttgagaaatgtagatcaattagggg-ttatagacattaaagttgattataacatttttagctttcttgatagtagatgaataaataaaggtcaaatact 364  Q
    |||||||||||  | ||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||| ||||||||||    
T  27616494 gttgagaaatgatggtcaattagggggttatagacattaaagttgattataacatttttagcttttctgatagtagatgtataaataaaagtcaaatact 27616395  T
Q  365 atgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgttttagaccgtctatagataa 464  Q
    |||||||||| ||||||||| || ||||||| ||||||| | ||||| | ||||||||||||| ||| |||||||||| |||||||||  ||||| ||||    
T  27616394 atgatatctt-gttttagaacttgttctaattaaataaactgctcaagtaagatgcttatgtacgtactttgattttcattttagaccacctataaataa 27616296  T
Q  465 tttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcgac 521  Q
     |||||||| ||||||| ||||||||||||| |||||||||||||| ||||||||||    
T  27616295 attaacatacatgtagcggtgtcggtgtcctgtattttttacattaacggtgtcgac 27616239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 245 - 515
Target Start/End: Complemental strand, 46533043 - 46532774
Alignment:
Q  245 agatacaagagttacatgtgtgttgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatga 344  Q
    ||||||||||| ||||| | | ||||| ||||| |||||||||||||||||| |||||| | ||||||||||||||||||||||| |||| || || |||    
T  46533043 agatacaagagctacatatattttgaggaatgttgatcaattaggggttataaacattacaattgattataacatttttagcttttttgacagcaggtga 46532944  T
Q  345 ataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgt 444  Q
    ||||| || |||||||||||| | ||||||  |||||||| |||||| |||||||||| || ||||| |||||||||||| |||||||||| |||||  |    
T  46532943 ataaacaatggtcaaatactacgttatctta-ttttagaactttttcaaatgaaataacttcctcaagttagatgcttatatatgtattttaatttttat 46532845  T
Q  445 tttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggt 515  Q
     ||| |||  ||||| |||| |||||||||||||||| ||||| |||| |||||||||||| |||||||||    
T  46532844 cttaaaccacctataaataaattaacatatatgtagcagtgtcagtgttctatattttttaaattagcggt 46532774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 305 - 518
Target Start/End: Complemental strand, 22290991 - 22290779
Alignment:
Q  305 agttgattataacatttttagctttcttgatagtagatgaataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaat 404  Q
    |||||||||||  |||||||||||| |||||||||||| |||||||||||||||||||| |||||||| ||||| ||||| ||||| |||||||||||||    
T  22290991 agttgattatataatttttagcttttttgatagtagattaataaataaaggtcaaatacaatgatatc-ttgttgtagaactttttttaatgaaataaat 22290893  T
Q  405 ttctcaacttagatgcttatgtatgtattttgattttcgttttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatatttttt 504  Q
    |  | || |||  || |||| |||||| |||  ||||| |||||||| |||| || | || |||||||| ||||||  || |||||||||||||||||||    
T  22290892 tgtttaagttaattgtttatatatgtaatttatttttccttttagactgtctttaaacaaattaacataaatgtagtggtatcggtgtcctatatttttt 22290793  T
Q  505 acattagcggtgtc 518  Q
    | ||||| ||||||    
T  22290792 aaattagtggtgtc 22290779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 247 - 488
Target Start/End: Original strand, 32716489 - 32716728
Alignment:
Q  247 atacaagagttacatgtgtgttgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatgaat 346  Q
    ||||||||||||||| | | ||||||||| | ||| ||| |||| |||||||||||||| ||||||  | |||||||| |||| | |||||| |||||||    
T  32716489 atacaagagttacatatatattgagaaattttgat-aatgagggattatagacattaaaattgattgcaccatttttaactttttcgatagtggatgaat 32716587  T
Q  347 aaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgttt 446  Q
    |||||||| |||||||||||  |||| ||||||||||| ||||| |||| ||| |||||  |||| ||||||    || ||||||||||||||||| |||    
T  32716588 aaataaagatcaaatactattgtatc-ttgttttagaactttttttaataaaacaaattattcaagttagatatacatatatgtattttgattttcattt 32716686  T
Q  447 tagaccgtctatagataatttaacatatatgtagctgtgtcg 488  Q
    |||||  |||||| || | |||| ||||||||||| ||||||    
T  32716687 tagacaatctataaattaattaatatatatgtagcagtgtcg 32716728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 308 - 431
Target Start/End: Original strand, 45215999 - 45216121
Alignment:
Q  308 tgattataacatttttagctttcttgatagtagatgaataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttc 407  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||||||||||| ||||| ||| || || ||||| |||||||||||| ||||||| |    
T  45215999 tgattatatcatttttagcttttttgacagtagatgaataaataaaggtcaaataatatgacatc-ttattgtagaactttttctaatgacataaattgc 45216097  T
Q  408 tcaacttagatgcttatgtatgta 431  Q
    |||| |||| || |||| ||||||    
T  45216098 tcaagttagttgtttatatatgta 45216121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 280 - 436
Target Start/End: Original strand, 11809286 - 11809440
Alignment:
Q  280 atcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatgaataaataaaggtcaaatactatgatatctttgttt 379  Q
    |||||| |||||| |||||||||||| ||||||| ||| ||||||  ||| ||||  |||||||||  |||||||| ||||||||||  |||| |||||     
T  11809286 atcaatgaggggtcatagacattaaatttgattacaacctttttaaattttttgacggtagatgaagtaataaaggccaaatactattgtatc-ttgtta 11809384  T
Q  380 tagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttg 436  Q
    || |||||||| |||||||||||||| ||||| ||||| || |||||||||||||||    
T  11809385 tataaattttt-taatgaaataaattgctcaagttagaagcatatgtatgtattttg 11809440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 268 - 436
Target Start/End: Original strand, 11820525 - 11820691
Alignment:
Q  268 tgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatgaataaataaaggtcaaatactatg 367  Q
    |||||||||| ||||||  | |||||||||||||||||| |||||| ||||||||||   || || ||||||||| ||||||||||| |||||| ||||     
T  11820525 tgagaaatgttgatcaacgaagggttatagacattaaagatgattacaacatttttaaaatttttaatagtagataaataaataaagctcaaatgctatt 11820624  T
Q  368 atatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttg 436  Q
     |||  ||||  ||||| |||||  ||||||||||||| ||||| |||||||| |||||||||||||||    
T  11820625 gtat-gttgtcatagaacttttt-gaatgaaataaattgctcaagttagatgcatatgtatgtattttg 11820691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 293 - 366
Target Start/End: Original strand, 44572487 - 44572560
Alignment:
Q  293 tatagacattaaagttgattataacatttttagctttcttgatagtagatgaataaataaaggtcaaatactat 366  Q
    |||| |||||| | ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  44572487 tatatacattacaattgattatatcatttttagcttttttgatagtagatgaataaataaaggtcaaatactat 44572560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 421 - 507
Target Start/End: Original strand, 44572565 - 44572651
Alignment:
Q  421 ttatgtatgtattttgattttcgttttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttaca 507  Q
    |||| ||||||||||||||||| |||||||||  || || |||| |||||||||||||||| |||||||| ||||||||||||||||    
T  44572565 ttatatatgtattttgattttcattttagaccaactttaaataaattaacatatatgtagcggtgtcggtttcctatattttttaca 44572651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 263 - 405
Target Start/End: Complemental strand, 6439914 - 6439769
Alignment:
Q  263 tgtgttgagaaatgtagatcaattaggggttatagacattaa----agttgattataacatttttagctttcttgatagtagatgaataaataaaggtca 358  Q
    ||||||||||||||| ||||| | ||| ||||||||||||||    ||||||||| |||||||||| |||| | |||||||| |||||||||| | ||||    
T  6439914 tgtgttgagaaatgttgatcattgaggagttatagacattaattaaagttgattacaacatttttatctttttcgatagtagttgaataaatagatgtca 6439815  T
Q  359 aatactatgatatctttgttttagaaatttttctaatgaaataaatt 405  Q
    ||||||||  |||| |||| ||| || |||||  |||||||||||||    
T  6439814 aatactatcgtatc-ttgtgttataacttttttcaatgaaataaatt 6439769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 374 - 524
Target Start/End: Original strand, 11812611 - 11812752
Alignment:
Q  374 ttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgttttagaccgtctatagataatttaacata 473  Q
    ||||| |||||||||||  ||||||||||||| ||||| |||||||| ||||||||||||||  ||  |  ||||||       || |||| |||| |||    
T  11812611 ttgttatagaaattttt--aatgaaataaattgctcaaattagatgcatatgtatgtatttttcttcccaatttaga-------taaataaattaatata 11812701  T
Q  474 tatgtagctgtgtcggtgtcctatattttttacattagcggtgtcgacgtg 524  Q
    || ||||||||||||||||||||| |||||||||||||||||||| |||||    
T  11812702 taggtagctgtgtcggtgtcctatgttttttacattagcggtgtcaacgtg 11812752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 287 - 439
Target Start/End: Complemental strand, 27994052 - 27993898
Alignment:
Q  287 aggggttatagacattaaagttgattataa---catttttagctttcttgatagtagatgaataaataaaggtcaaatactatgatatctttgttttaga 383  Q
    |||| ||||||||||||||||| |||| ||   ||||||||  ||| | ||| ||||||| |||||||||| |||| | ||||  |||||| ||| ||||    
T  27994052 agggtttatagacattaaagtttattacaaatgcatttttaaatttttcgatggtagatggataaataaagatcaattgctattgtatctt-gttataga 27993954  T
Q  384 aatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgatt 439  Q
    | ||| | |||||||||||||| ||||| ||| |||| ||||||||||||||||||    
T  27993953 actttatttaatgaaataaattgctcaagttaaatgcatatgtatgtattttgatt 27993898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 337 - 506
Target Start/End: Original strand, 44182664 - 44182831
Alignment:
Q  337 gtagatgaataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttg 436  Q
    |||||| ||||||||||||||| |||||||||||| ||| ||||||||  |||| | ||||||||||||  |||   |||||  |||| |||||||||||    
T  44182664 gtagataaataaataaaggtcatatactatgatat-tttattttagaatattttttgatgaaataaattgttcatactagatatttatatatgtattttg 44182762  T
Q  437 attttcgttttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttac 506  Q
    |||||  ||||||| |||||||| |||| || | |||| |||||| | ||  ||| ||||||||||||||    
T  44182763 atttttattttagatcgtctataaataaatt-atatatgtgtagcagcgttagtggcctatattttttac 44182831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 347 - 436
Target Start/End: Original strand, 11816926 - 11817013
Alignment:
Q  347 aaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttg 436  Q
    ||||||||||||||||| ||  |||||| ||| || |||||||| |||||||||||||| ||||  ||||||||||||||||||||||||    
T  11816926 aaataaaggtcaaatacgattgtatctt-gttatataaattttt-taatgaaataaattgctcatgttagatgcttatgtatgtattttg 11817013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 471 - 524
Target Start/End: Original strand, 45216113 - 45216166
Alignment:
Q  471 atatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcgacgtg 524  Q
    ||||||||| | ||||| ||||| ||||||||||||||||||||||||||||||    
T  45216113 atatatgtaacggtgtccgtgtcttatattttttacattagcggtgtcgacgtg 45216166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 436
Target Start/End: Original strand, 11810979 - 11811077
Alignment:
Q  336 agtagatgaataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtatttt 435  Q
    ||||||| ||| ||||||||||||||| |||  |||||| |||  | |||||||| |||||||||||||| ||||| ||||| || ||||||||||||||    
T  11810979 agtagataaattaataaaggtcaaatattattgtatctt-gttagataaattttt-taatgaaataaattgctcaagttagaggcatatgtatgtatttt 11811076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 287 - 524
Target Start/End: Original strand, 11814414 - 11814642
Alignment:
Q  287 aggggttatagacattaaagttgattataacatttttagctttcttgatagtagatgaataaataaaggtcaaatactatgatatctttgttttagaaat 386  Q
    |||||||||||||||||| |||||||| | ||||||||  ||| ||||||||| || ||  |||| |||||||||| | |  ||||  ||||   |||||    
T  11814414 aggggttatagacattaatgttgattacaccatttttaatttttttgatagtatataaaataatagaggtcaaatattgttgtatc-gtgttaatgaaat 11814512  T
Q  387 ttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgttttagaccgtctatagataatttaacatatatgtagctgtgt 486  Q
     ||| | |||||||||||| ||||  |||||||| ||| ||||||||||| || ||  |||||       ||| || | |||| ||||| ||| | ||||    
T  11814513 attt-tcatgaaataaattgctcatattagatgcatatttatgtattttgcttctcaatttag-------ataaatcacttaatatataggtaacagtgt 11814604  T
Q  487 cggtgtcctatattttttacattagcggtgtcgacgtg 524  Q
    ||||||||||| |||||||||||| ||||||| |||||    
T  11814605 cggtgtcctatgttttttacattaacggtgtcaacgtg 11814642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 478 - 518
Target Start/End: Original strand, 11815708 - 11815748
Alignment:
Q  478 tagctgtgtcggtgtcctatattttttacattagcggtgtc 518  Q
    |||| ||||| ||||||||||||||||||||||||||||||    
T  11815708 tagcagtgtcagtgtcctatattttttacattagcggtgtc 11815748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 437 - 520
Target Start/End: Complemental strand, 10678338 - 10678255
Alignment:
Q  437 attttcgttttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcga 520  Q
    |||||| ||||||||| | |||| |||| |||| |||||| || |  |||||||||||||||||||||| | ||| ||||||||    
T  10678338 attttcattttagaccatatataaataaattaatatatatctaacgatgtcggtgtcctatattttttaaactagtggtgtcga 10678255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 292
Target Start/End: Complemental strand, 10678584 - 10678435
Alignment:
Q  141 ctagaactggtgtccgacacctatatagcactcatatgagtcttgttggacaattcagacaaatatctaaaacannnnnnnnctttctcgcttctacata 240  Q
    |||| |||||||||||||||||||||| |||||||| ||  | |||  ||||| |||||||||||| |||| ||         | ||| ||||| |||||    
T  10678584 ctaggactggtgtccgacacctatataacactcatacgaaccgtgtctgacaactcagacaaatatttaaa-catttctttt-tctcttgcttccacata 10678487  T
Q  241 tcgcagatacaagagttacatgtgtgttgagaaatgtagatcaattaggggt 292  Q
     || ||||||||||||||| | ||| ||||||||| | ||||||||||||||    
T  10678486 ccgtagatacaagagttacgtatgttttgagaaatattgatcaattaggggt 10678435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 430
Target Start/End: Complemental strand, 48598474 - 48598314
Alignment:
Q  268 tgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatag-tagatgaataaataaaggtcaaatactat 366  Q
    |||||||||| ||||||| |||| | ||||| |||||||||| ||| ||| |||||   ||| ||||||  ||| || ||||||||||||||||||||||    
T  48598474 tgagaaatgttgatcaatgaggg-tcatagatattaaagttggttacaacgttttttaattttttgatatatag-tggataaataaaggtcaaatactat 48598377  T
Q  367 gatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgt 430  Q
      ||||  |||| || ||||| || ||||||||| ||||  |||| |||||||| |||||||||    
T  48598376 tgtatc-gtgttatataaattattttaatgaaatgaattgttcaagttagatgcatatgtatgt 48598314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 45215898 - 45215963
Alignment:
Q  149 ggtgtccgacacctatatagcactcatatgagtcttgttggacaattcagacaaatatctaaaaca 214  Q
    |||||||||||||||| || |||||||| ||| | ||| ||||||  ||| |||||||||||||||    
T  45215898 ggtgtccgacacctatgtaacactcatacgagccgtgtcggacaacccagtcaaatatctaaaaca 45215963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 132; Significance: 3e-68; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 245 - 510
Target Start/End: Complemental strand, 32741036 - 32740775
Alignment:
Q  245 agatacaagagttacatgtgtgttgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatga 344  Q
    ||||||||||||||||| ||| ||| ||||||| |||||||| |||||||||||||||| | ||||||||  ||||||||||||| ||||| ||||||||    
T  32741036 agatacaagagttacatatgttttgtgaaatgttgatcaattgggggttatagacattacaattgattat--catttttagcttttttgatggtagatga 32740939  T
Q  345 ataaataaaggtcaaatactat--gatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttc 442  Q
    ||||||||||||||||||||||  |||||||| |||   ||| |||||||||| ||||||||| ||||| ||||||| |||| |||||||||| ||||||    
T  32740938 ataaataaaggtcaaatactatatgatatctt-gtt---gaactttttctaattaaataaattgctcaagttagatgtttatatatgtattttaattttc 32740843  T
Q  443 gttttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacatta 510  Q
     ||||||||| ||| ||||||| |||||||||||||||  ||||| ||||||||||||||||||||||    
T  32740842 attttagaccatctttagataaattaacatatatgtagtggtgtcagtgtcctatattttttacatta 32740775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 245 - 520
Target Start/End: Original strand, 9148972 - 9149243
Alignment:
Q  245 agatacaagagttacatgtgtgttgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatga 344  Q
    ||||||||||||||| | ||  || ||||||||||||||||| | ||||||||||||||||||||  |||||||||||||||||| |||||||||||| |    
T  9148972 agatacaagagttacgtatga-ttaagaaatgtagatcaattggtggttatagacattaaagttggctataacatttttagcttttttgatagtagataa 9149070  T
Q  345 ataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgt 444  Q
    |||||||||||| ||||||||||||||| |||||||| |  |||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||| |    
T  9149071 ataaataaaggtaaaatactatgatatc-ttgttttaaacttttttctaatgaaataaatttctcaagttagattcttatatatgtattttgattttcat 9149169  T
Q  445 tttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcga 520  Q
     ||| | ||| |||| |||| |||||  ||| ||||| |||||  | ||||||||||||||||| |||||||||||    
T  9149170 attatatcgtttataaataaattaac--ataagtagcagtgtcattttcctatattttttacataagcggtgtcga 9149243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 232 - 508
Target Start/End: Original strand, 48632542 - 48632813
Alignment:
Q  232 ttctacatatcgcagatacaagagttacatgtgtgttgagaaatgtagatcaatta-ggggttatagacattaaagttgattataacatttttagctttc 330  Q
    ||||||| | || ||||||||||||| ||| ||||||||||||||| ||||||||| ||||||||||| |||||||||||||| ||| |||||||||||     
T  48632542 ttctacacaccgtagatacaagagttgcatatgtgttgagaaatgttgatcaattacggggttatagaaattaaagttgattacaacgtttttagctttt 48632641  T
Q  331 ttgatagtagatgaataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgt 430  Q
    ||||||||||| ||||||||||||||||||||||||| |||| ||||||||||| |||||  ||||||||||| | ||||| ||| || ||||||||||     
T  48632642 ttgatagtagaagaataaataaaggtcaaatactatggtatc-ttgttttagaacttttttcaatgaaataaactgctcaagttaaattcttatgtatga 48632740  T
Q  431 attttgattttcgttttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacat 508  Q
    ||||||||||||||||||||      ||| |||| |||| |||| |||||| |||  |||||||||||||||||||||    
T  48632741 attttgattttcgttttaga-----gataaataaattaatatatgtgtagcggtgatggtgtcctatattttttacat 48632813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 149 - 504
Target Start/End: Complemental strand, 23432155 - 23431798
Alignment:
Q  149 ggtgtccgacacctatatagcactcatatgagtcttgttggacaattcagacaaatatctaaaacannnnnnnnctttctcgcttctacatatcgcagat 248  Q
    |||||||||||| |||||| |||||||| ||| | ||| |||||| ||||| ||||||||| ||||         | ||||  ||| |||||  | ||||    
T  23432155 ggtgtccgacacttatataacactcatacgagccgtgtcggacaactcagataaatatctagaacattttt----tctctcatttccacatacagaagat 23432060  T
Q  249 acaagagttacatgtgtgttgagaaatgtagatcaattaggggtt--------atagacattaaagttgattataacatttttagctttcttgatagtag 340  Q
    ||||||||||||| ||| ||||||| ||| || |||||||||| |        ||||||||||  || |||||||||||||||| |||| ||||||||||    
T  23432059 acaagagttacatatgttttgagaagtgt-gaacaattagggggtaatagacaatagacattaccgtagattataacatttttaacttttttgatagtag 23431961  T
Q  341 atgaataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattt 440  Q
    |||||||||| || ||||||||||| ||||| |||||||||||| ||||||||||||||||| || ||||| |||||||||||| |||||||||||||||    
T  23431960 atgaataaatgaatgtcaaatactacgatat-tttgttttagaactttttctaatgaaataacttgctcaagttagatgcttatatatgtattttgattt 23431862  T
Q  441 tcgttttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatatttttt 504  Q
    || ||||||||||| |||| |||| ||||||||||||||||  ||||||| |||||||||||||    
T  23431861 tcattttagaccgtatataaataaattaacatatatgtagcactgtcggtatcctatatttttt 23431798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 245 - 512
Target Start/End: Original strand, 7021541 - 7021811
Alignment:
Q  245 agatacaagagttacatgtgtgttgagaaatgtagatcaattag-gggttatagacatta--aagttgattataacatttttagctttctt-gatagtag 340  Q
    ||||| ||||||||||| ||||||||||||||| ||| |||||| |||||||||| ||||  |||||||||| ||||||||| ||||| || ||||||||    
T  7021541 agatataagagttacatatgtgttgagaaatgttgataaattagcgggttatagaaattataaagttgattacaacatttttggctttttttgatagtag 7021640  T
Q  341 atgaataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattt 440  Q
    || ||||||||||||||||||  | || ||| |||||||||||| |||||  ||| ||||||||| | ||| ||||||| |||||||| |||||||||||    
T  7021641 ataaataaataaaggtcaaatcttgtggtat-tttgttttagaacttttttcaataaaataaattgcgcaagttagatgtttatgtatatattttgattt 7021739  T
Q  441 tcgttttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagc 512  Q
    || ||||| ||||| |||| |||| |||| ||||||| ||| || | ||| |||||||||||||||||||||    
T  7021740 tcattttaaaccgtttataaataaattaatatatatgaagcggtattggtatcctatattttttacattagc 7021811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 267 - 439
Target Start/End: Complemental strand, 3955117 - 3954946
Alignment:
Q  267 ttgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatgaataaataaaggtcaaatactat 366  Q
    ||||||||||| ||||||  |||||||| ||| |||||||||||||| ||| ||||||||||| | ||||||||||| ||||||||||||||||||| ||    
T  3955117 ttgagaaatgttgatcaacaaggggttacagagattaaagttgattacaacgtttttagctttttcgatagtagatggataaataaaggtcaaatacgat 3955018  T
Q  367 gatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgatt 439  Q
      |||| || |||||||| ||||| |||||||||||||| ||||| ||||||||  ||||||||||| |||||    
T  3955017 cgtatc-ttattttagaactttttttaatgaaataaattgctcaagttagatgcacatgtatgtattctgatt 3954946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 268 - 439
Target Start/End: Complemental strand, 3387821 - 3387651
Alignment:
Q  268 tgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatgaataaataaaggtcaaatactatg 367  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||| ||| ||||||  ||| | ||| ||||||||||||||||||||||||||||||     
T  3387821 tgagaaatgttgatcaatcaagggttatagacattaaagttgattacaacgtttttaaatttttcgatggtagatgaataaataaaggtcaaatactatt 3387722  T
Q  368 atatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgatt 439  Q
     |||| ||||| ||||| ||||| |||| |||||||||  |||| ||| |||| ||||||||||||||||||    
T  3387721 ttatc-ttgttatagaactttttttaataaaataaattgttcaagttaaatgcatatgtatgtattttgatt 3387651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 304 - 435
Target Start/End: Complemental strand, 18476637 - 18476506
Alignment:
Q  304 aagttgattataacatttttagctttcttgatagtagatgaataaataaa-ggtcaaatactatgatatctttgttttagaaatttttctaatgaaataa 402  Q
    |||||||||| || |||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||| | ||||||| |||||||||||||||||    
T  18476637 aagttgattacaatatttttagcttttttgatagtagatgaataaataaaaggtcaaatactacgatatctt-gctttagaactttttctaatgaaataa 18476539  T
Q  403 atttctcaacttagatgcttatgtatgtatttt 435  Q
     || ||||| |||||||||||| ||||||||||    
T  18476538 cttgctcaagttagatgcttatatatgtatttt 18476506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 252 - 363
Target Start/End: Complemental strand, 126435 - 126323
Alignment:
Q  252 agagttacatgtgtgttgagaaatgtagatcaattagggg--ttatagacattaaagttgattataacatttttagctttcttgatagtagatgaataaa 349  Q
    |||||||||| ||| ||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||    
T  126435 agagttacatatgttttgagaaatgttgatcaattaggggggttatagacattaaagttgattataacatttttaacttt-ttaatagtagatgaataaa 126337  T
Q  350 taaaggtcaaatac 363  Q
    ||||||||||||||    
T  126336 taaaggtcaaatac 126323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 268 - 524
Target Start/End: Complemental strand, 16426598 - 16426343
Alignment:
Q  268 tgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatgaataaataaaggtcaaatactatg 367  Q
    |||||||||| ||||||  ||| ||||||||||||||||||||||| |     ||||  ||| |  ||| |||||  ||||||||||| ||||||||||     
T  16426598 tgagaaatgttgatcaacgaggagttatagacattaaagttgattacagtgcatttaaatttttcaataatagatagataaataaaggccaaatactatt 16426499  T
Q  368 atatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgttttagaccgtctatagataattt 467  Q
     ||  |||||| ||||| || || ||||||| |||||| ||||| |||||||| |||||||||||||||||| |   |||| | | | |||| |||| ||    
T  16426498 gtaa-tttgttatagaacttgttttaatgaagtaaattgctcaagttagatgcatatgtatgtattttgattcttaatttatatcttttataaataaatt 16426400  T
Q  468 aacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcgacgtg 524  Q
    || ||||| ||||| ||||| |||||||||  ||||||||||| |||||| ||||||    
T  16426399 aatatataggtagcggtgtcagtgtcctatgctttttacattaacggtgttgacgtg 16426343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 355 - 459
Target Start/End: Complemental strand, 125256 - 125153
Alignment:
Q  355 gtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgttttagaccgt 454  Q
    ||||||||||||||| |||| |||||| || ||||| |||||||||||||| ||||| |||||| ||| ||||||||||||||||| | |||||| | ||    
T  125256 gtcaaatactatgatttctt-gttttaaaactttttttaatgaaataaattgctcaagttagatacttgtgtatgtattttgatttacattttagtctgt 125158  T
Q  455 ctata 459  Q
    |||||    
T  125157 ctata 125153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 287 - 439
Target Start/End: Original strand, 50127176 - 50127326
Alignment:
Q  287 aggggttatagacattaaagttgattataacatttttagctttcttgatagtagatgaataaataaaggtcaaatactatgatatctttgttttagaaat 386  Q
    |||||||||||||||||||||||| |  | |   ||||  ||| | ||||||||||||| ||||||||| ||||||||||  |||||| ||| ||||| |    
T  50127176 aggggttatagacattaaagttgaatgcagcgcatttaaatttttcgatagtagatgaa-aaataaaggccaaatactattgtatctt-gttatagaact 50127273  T
Q  387 ttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgatt 439  Q
    || | ||||||||||||||  |||| |||||||| ||||||||||||||||||    
T  50127274 ttatttaatgaaataaattgttcaagttagatgcatatgtatgtattttgatt 50127326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 466 - 520
Target Start/End: Original strand, 10171642 - 10171696
Alignment:
Q  466 ttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcga 520  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  10171642 ttaacatatatgtagcggtgtcggtgtcctatattttttacactagcggtgtcga 10171696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 155 - 309
Target Start/End: Complemental strand, 18488488 - 18488333
Alignment:
Q  155 cgacacctatatagcactcatatgagtcttgttggacaattcagacaaatatctaaaacannnnnnnnctttctcgcttctacatatcgcagatacaaga 254  Q
    ||||||||||||| || ||||| ||| | ||| |||||| || ||||||||| | |||||        || ||| ||||| |||||||| |||| |||||    
T  18488488 cgacacctatataacattcatacgagccatgtcggacaactctgacaaatatatgaaacattttttttctctcttgcttccacatatcgtagatccaaga 18488389  T
Q  255 gttacatgtgtgttgagaaatgtagatcaattagg-ggttatagacattaaagttg 309  Q
    ||||||||||| ||||||||||| ||| |||| || ||| |||||||||| |||||    
T  18488388 gttacatgtgttttgagaaatgttgattaatttggaggtaatagacattacagttg 18488333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 471 - 530
Target Start/End: Original strand, 30883231 - 30883290
Alignment:
Q  471 atatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcgacgtgccagtg 530  Q
    ||||||| ||| ||||||||||||||| ||||||||||||||||||| |||||| |||||    
T  30883231 atatatgcagcggtgtcggtgtcctatgttttttacattagcggtgttgacgtgtcagtg 30883290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 520
Target Start/End: Complemental strand, 124428 - 124379
Alignment:
Q  471 atatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcga 520  Q
    ||||||||||| ||||  || |||||||||||||||||||| ||||||||    
T  124428 atatatgtagcggtgttagtatcctatattttttacattagtggtgtcga 124379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 130; Significance: 4e-67; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 151 - 524
Target Start/End: Original strand, 45612316 - 45612685
Alignment:
Q  151 tgtccgacacctatatagcactcatatgagtcttgttggacaattcagacaaatatctaaaacannnnnnnnctttctc--gcttctacatatcgcagat 248  Q
    |||||||||||| |||| |||||||| ||||| ||| |||||| ||| ||||||||||||||||         | ||||  |||||  || | |  ||||    
T  45612316 tgtccgacacctgtataacactcatacgagtcgtgtcggacaactcaaacaaatatctaaaacaatttttttttctctcttgcttccgcacaccatagat 45612415  T
Q  249 acaagagttacatgtgtgtt-gagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatgaata 347  Q
    ||||||||||||| ||| || ||||||||| ||| ||| |||| |||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||    
T  45612416 acaagagttacatatgtttttgagaaatgttgattaataagggtttatagacattatagttgattatatcatttttagcttttttgatagtagatgaata 45612515  T
Q  348 aataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgtttt 447  Q
    |||||||||||||||     ||||| ||||| |||||  ||||||||||| ||||||| ||||| || |||| |||| |||||||||| |||||| ||||    
T  45612516 aataaaggtcaaata-----atatc-ttgttgtagaacattttctaatgacataaattgctcaagttggatgtttatatatgtattttaattttcatttt 45612609  T
Q  448 agaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcgacgtg 524  Q
    |||| |||| || || | ||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||    
T  45612610 agacagtctttaaatgaattaacatatatgtaattgtgtcggtgt-ctatattttttacattagcggtgtcgacgtg 45612685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 230 - 436
Target Start/End: Complemental strand, 17732979 - 17732772
Alignment:
Q  230 gcttctacatatcgcagatacaagagttacatgtgtgttgagaaatgtagatcaattagg-ggttatagacattaaagttgattataacatttttagctt 328  Q
    ||||| |||||||| ||||||||||||||||||||| ||||||||||| ||| ||||||| ||| |||||||||| ||||||||||||||||||||||||    
T  17732979 gcttccacatatcgtagatacaagagttacatgtgttttgagaaatgttgattaattaggaggtaatagacattacagttgattataacatttttagctt 17732880  T
Q  329 tcttgatagtagatgaataaat-aaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgta 427  Q
    | |||||||||||||||||||| ||||||||||||||| |||||| ||| ||||||| ||||||||||||||||| || ||||| |||||||||||| ||    
T  17732879 ttttgatagtagatgaataaataaaaggtcaaatactacgatatc-ttgctttagaactttttctaatgaaataacttgctcaagttagatgcttatata 17732781  T
Q  428 tgtattttg 436  Q
    |||||||||    
T  17732780 tgtattttg 17732772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 149 - 451
Target Start/End: Original strand, 40289031 - 40289330
Alignment:
Q  149 ggtgtccgacacctatatagcactcatatgagtcttgttggacaattcagacaaatatctaaaacannnnnnnnctttctcgcttctacatatcgcagat 248  Q
    ||||||||||||||||||| |||||||| ||||| ||| |||||| ||| ||||||||||||||||        || ||| ||||| ||| | |  ||||    
T  40289031 ggtgtccgacacctatataacactcatacgagtcatgtcggacaactcaaacaaatatctaaaacatttttt--ctctcttgcttccacacaccatagat 40289128  T
Q  249 acaagagttacatgtgtgttgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatgaataa 348  Q
    |||||| |||||| ||| |||||||||||  |||||||||||||| ||||||||| | |||||||    |||||||| ||| ||||||||||||||||||    
T  40289129 acaagatttacatatgttttgagaaatgttaatcaattaggggttgtagacattacaattgattaagttatttttagtttttttgatagtagatgaataa 40289228  T
Q  349 ataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgtttta 448  Q
    |||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||   ||| ||| ||| |||| |||||||||| |||||| |||||    
T  40289229 ataaaggtcaaatactatgatatc-ttgttgtagaactttttctaatgaaataaattgtccaagttaaatgtttatatatgtattttaattttcatttta 40289327  T

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Target: chr4; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 338 - 524
Target Start/End: Complemental strand, 54305752 - 54305567
Alignment:
Q  338 tagatgaataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttga 437  Q
    ||||||||||||||||||||||||||||||||||||| ||  ||||| |||||||||| ||||||||| ||||| ||| ||| || | |||||||||| |    
T  54305752 tagatgaataaataaaggtcaaatactatgatatctt-gtcgtagaactttttctaattaaataaattgctcaagttaaatgtttgtatatgtattttaa 54305654  T
Q  438 ttttcgttttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcgacgtg 524  Q
    ||||| ||||| ||||||| || |||| |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||    
T  54305653 ttttcattttaaaccgtctttaaataaattaacatatatgtagcggtgtcggtgtcctataatttttacattagcgatgtcgacgtg 54305567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 230 - 403
Target Start/End: Complemental strand, 31734697 - 31734527
Alignment:
Q  230 gcttctacatatcgcagatacaagagttacatgtgtgttgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagcttt 329  Q
    ||||| ||||| || ||||||||||||||||| ||| ||||||||||| |||||  | ||||| |||||||||| ||||||||||||||||||||||| |    
T  31734697 gcttccacataccgtagatacaagagttacatatgttttgagaaatgttgatcacat-ggggtaatagacattatagttgattataacatttttagctct 31734599  T
Q  330 cttgatagtagatgaataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaa 403  Q
     |||||||||||||||||||||||||  |||||||| |||||| ||||||||||| ||||||||||||||||||    
T  31734598 tttgatagtagatgaataaataaagg-aaaatactacgatatc-ttgttttagaactttttctaatgaaataaa 31734527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 349 - 524
Target Start/End: Complemental strand, 55680822 - 55680648
Alignment:
Q  349 ataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgtttta 448  Q
    ||||| |||||||||||||||||||| ||| ||||| ||||||| |||| | ||||| ||| | ||||||| |||| |||||||||| ||||||  ||||    
T  55680822 ataaatgtcaaatactatgatatctt-gttgtagaactttttctgatgacagaaattgctcgagttagatgtttatatatgtattttaattttcacttta 55680724  T
Q  449 gaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcgacgtg 524  Q
    ||| |||| || |||| |||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||    
T  55680723 gacggtctttaaataaattaacatataagtaacggtgtcggtgtcctatattttttacattagcggtgtcgacgtg 55680648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 265 - 419
Target Start/End: Complemental strand, 44507857 - 44507704
Alignment:
Q  265 tgttgagaaatgt-agatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatgaataaataaaggtcaaatac 363  Q
    ||||||||||||| |||||||| |||| ||||||||||||||||  |||| |||||||||| |||| || |||| ||||| |||||||||||||||||      
T  44507857 tgttgagaaatgttagatcaatgagggattatagacattaaagtcaattacaacatttttatctttttttatagaagatggataaataaaggtcaaatgt 44507758  T
Q  364 tatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatg 419  Q
     || |||| |||||||||| ||||||| |||||||||||||||||||| |||||||    
T  44507757 catcatat-tttgttttag-aatttttttaatgaaataaatttctcaaattagatg 44507704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 254 - 450
Target Start/End: Complemental strand, 2641321 - 2641122
Alignment:
Q  254 agttacatgtgtgttgagaaatgtagatcaattaggg-gttatagacattaaagttgattataacatttttagctttcttgatagtagatgaataaataa 352  Q
    |||| ||| ||||||||||||||| ||||||| | || |||||||| |||||||||||||| ||  |||||  |||| || ||||||||| |||||||||    
T  2641321 agtttcatatgtgttgagaaatgttgatcaatcatggagttatagaaattaaagttgattacaatgtttttgactttttttatagtagataaataaataa 2641222  T
Q  353 aggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgctta---tgtatgtattttgattttcgttttag 449  Q
    ||||||||||| ||  ||| |||||||||||| |||||  |||||||||| || ||||| ||| || ||||   ||||||||||||||||| | ||||||    
T  2641221 aggtcaaataccatagtat-tttgttttagaacttttttcaatgaaataagttgctcaaattaaattcttattgtgtatgtattttgatttgcattttag 2641123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 245 - 326
Target Start/End: Complemental strand, 3420041 - 3419960
Alignment:
Q  245 agatacaagagttacatgtgtgttgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagc 326  Q
    ||||||||||||||||| ||| ||||||||||| |||||||||||||||||||| |||| |||||||||||  |||||||||    
T  3420041 agatacaagagttacatatgttttgagaaatgttgatcaattaggggttatagatattatagttgattatataatttttagc 3419960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 393 - 523
Target Start/End: Original strand, 658541 - 658671
Alignment:
Q  393 aatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgttttagaccgtctatagataatttaacatatatgtagctgtgtcggtgt 492  Q
    ||||||||||||| | ||| ||| ||||||| ||||||||||| |||||| ||||||||| |||||  |||| |||  ||||||||  |  |||||||||    
T  658541 aatgaaataaattgcgcaatttatatgcttacgtatgtatttttattttcattttagaccctctattaataaattactatatatgtgtcgctgtcggtgt 658640  T
Q  493 cctatattttttacattagcggtgtcgacgt 523  Q
    |||| ||||||||||||||| |||| |||||    
T  658641 cctagattttttacattagcagtgttgacgt 658671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 471 - 521
Target Start/End: Complemental strand, 35529532 - 35529481
Alignment:
Q  471 atatatgtagctgtgtcggtgtcctatatt-ttttacattagcggtgtcgac 521  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  35529532 atatatgtagcggtgtcggtgtcctatatttttttacattagcggtgtcgac 35529481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 374 - 450
Target Start/End: Complemental strand, 35530122 - 35530048
Alignment:
Q  374 ttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgttttaga 450  Q
    ||||||||||||||||  ||| |||||||||| ||||| ||||||||  |||||| |||||||||| ||| ||||||    
T  35530122 ttgttttagaaatttt--taaagaaataaattgctcaatttagatgcacatgtatatattttgattctcgatttaga 35530048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 329
Target Start/End: Original strand, 658455 - 658536
Alignment:
Q  249 acaagagttacatgtgtgttgagaaatgtagatcaatt-aggggttatagacattaaagttgattataacatttttagcttt 329  Q
    ||||||||||||| |||| ||| |||||| || ||||| | || ||||||| ||| |||||||||| |||||||||| ||||    
T  658455 acaagagttacatatgtgctgaaaaatgttgaacaattaaaggtttatagaaatttaagttgattacaacatttttaacttt 658536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 353
Target Start/End: Complemental strand, 24600984 - 24600931
Alignment:
Q  300 attaaagttgattataacatttttagctttcttgatagtagatgaataaataaa 353  Q
    |||||| || |||| |||||||||| |||| ||||||||||||| |||||||||    
T  24600984 attaaatttaattacaacatttttaacttttttgatagtagatggataaataaa 24600931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 353
Target Start/End: Complemental strand, 24614671 - 24614618
Alignment:
Q  300 attaaagttgattataacatttttagctttcttgatagtagatgaataaataaa 353  Q
    |||||| ||||||| || ||||||| |||| ||||||||||||| |||||||||    
T  24614671 attaaatttgattacaatatttttaacttttttgatagtagatggataaataaa 24614618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 461 - 513
Target Start/End: Original strand, 40289809 - 40289860
Alignment:
Q  461 ataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcg 513  Q
    |||| |||||||||||||||| ||||||||||  |||| ||||||||||||||    
T  40289809 ataaattaacatatatgtagcggtgtcggtgttttata-tttttacattagcg 40289860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 122; Significance: 2e-62; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 263 - 519
Target Start/End: Complemental strand, 13050 - 12794
Alignment:
Q  263 tgtgttgagaaatgtagatcaattagg-ggttatagacattaaagttgattataacatttttagctttcttgatagtagatgaataaataaaggtcaaat 361  Q
    |||||||||||| || ||||||||||| ||||||||| |||||||||||||| ||  ||||||||||| ||||||||||||||||||||||| |||||||    
T  13050 tgtgttgagaaacgttgatcaattaggaggttatagaaattaaagttgattacaatgtttttagcttttttgatagtagatgaataaataaatgtcaaat 12951  T
Q  362 actatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgattttcgttttagaccgtctataga 461  Q
    |||| || ||||| ||||| ||| |||||   |||||||||||| ||||| ||| || ||||||| ||||||||||||||| |||||| || ||| || |    
T  12950 actaggacatctt-gttttcgaacttttttcgatgaaataaattgctcaagttaaattcttatgtttgtattttgattttcattttaggccttctgtaaa 12852  T
Q  462 taatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcg 519  Q
    ||| |||| ||||||||||| ||||||||||||| |||||||||||||||| ||||||    
T  12851 taaattaatatatatgtagcggtgtcggtgtcctgtattttttacattagcagtgtcg 12794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 88; Significance: 5e-42; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 232 - 523
Target Start/End: Original strand, 70030 - 70323
Alignment:
Q  232 ttctacatatcgcagatacaagagttacatgtgtgttgagaaatgtagatcaattag-gggttatagacattaaagttgattataacatttttagcttt- 329  Q
    ||||||| | || |||||||||| |||||| ||||||||||||||| |||||||||| |||||||||| ||||||||||||||   |||||||||||||     
T  70030 ttctacacaacgtagatacaagaattacatatgtgttgagaaatgttgatcaattagagggttatagaaattaaagttgatta---catttttagctttt 70126  T
Q  330 ----cttgatagtagatgaataaataaaggtcaaatactatgatatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatg 425  Q
        ||| ||| |||||||||||||||| |||||||||||||||||| ||||||||||| |||||  ||| || |||||| ||| | ||| || |||||     
T  70127 ttttctttatattagatgaataaataaatgtcaaatactatgatatc-ttgttttagaacttttttcaataaagtaaattgctcgagttaaattcttata 70225  T
Q  426 tatgtattttgattttcgttttagaccgtctatagataatttaacatatatgtagctgtgtcggtgtcctatattttttacattagcggtgtcgacgt 523  Q
    | || ||||| |||||| | ||||||| ||||||  ||| || | ||| ||||||  |||||  ||| || | |||||||||||||||||||||||||    
T  70226 tttgcattttaattttcatcttagaccatctataagtaaattgatatacatgtagtggtgtctatgtactgtgttttttacattagcggtgtcgacgt 70323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 268 - 439
Target Start/End: Complemental strand, 209355 - 209187
Alignment:
Q  268 tgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatgaataaataaaggtcaaatactatg 367  Q
    |||||||||| ||||||  ||||||||| |||||||||||| |||| ||| ||||||  ||| | ||| ||||||| ||||||||||| |||||| | |     
T  209355 tgagaaatgttgatcaacgaggggttatcgacattaaagtttattacaacgtttttaaatttttcgattgtagatggataaataaaggccaaatattgtt 209256  T
Q  368 atatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgatt 439  Q
     ||| |||||| ||||| ||||| |||||||||||||| ||  | |||||||| ||||||||||||||||||    
T  209255 gtat-tttgttatagaactttttttaatgaaataaattgct--agttagatgcatatgtatgtattttgatt 209187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1723 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold1723
Description:

Target: scaffold1723; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 268 - 439
Target Start/End: Original strand, 334 - 502
Alignment:
Q  268 tgagaaatgtagatcaattaggggttatagacattaaagttgattataacatttttagctttcttgatagtagatgaataaataaaggtcaaatactatg 367  Q
    |||||||||| ||||||  | ||||||| ||||| ||||||||||  ||| | |||   ||| | ||||| ||||| ||||||||||||||||||||||     
T  334 tgagaaatgttgatcaacaatgggttatggacatcaaagttgattccaacgtatttcaattt-tcgatagcagatggataaataaaggtcaaatactatt 432  T
Q  368 atatctttgttttagaaatttttctaatgaaataaatttctcaacttagatgcttatgtatgtattttgatt 439  Q
     |||| ||||| ||||| ||||| ||||||||||| || ||||| |||||||| ||| ||||||||||||||    
T  433 gtatc-ttgttatagaattttttttaatgaaataatttgctcaagttagatgcatat-tatgtattttgatt 502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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